mRNA_P-wetherbeei_contig2055.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig2055.4.1 vs. uniprot
Match: A0A835YP89_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YP89_9STRA) HSP 1 Score: 174 bits (440), Expect = 8.970e-43 Identity = 83/129 (64.34%), Postives = 108/129 (83.72%), Query Frame = 1
Query: 229 PSCRRIRAMMLFVVAVYVGTMYPRLNHTTANLTEMSGAAFFNVWCVLFAVISATPSFVVDRRVALEEMLNGAYGPATHCLAQFVASMPFTAASAFIYQAIFHFIVGFNDSFESYMFASLLTITLLLMME 615
P+ +R + L +VAVYVGT+YPRL+ TT N++++SGAAFFN WCVLFAV++ATPSFVV+RR AL+EMLNGAY +CL+QF AS+P+TA +A IYQAIFH+IVGFN +F SY++A L+T+ LLLMME
Sbjct: 1041 PTVYWLRLIELIMVAVYVGTIYPRLDTTTDNISQISGAAFFNTWCVLFAVVAATPSFVVERRTALQEMLNGAYTAPMYCLSQFCASLPYTAVTAIIYQAIFHWIVGFNPAFGSYVYAVLITVALLLMME 1169
BLAST of mRNA_P-wetherbeei_contig2055.4.1 vs. uniprot
Match: A0A835YR14_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR14_9STRA) HSP 1 Score: 158 bits (399), Expect = 1.840e-37 Identity = 74/124 (59.68%), Postives = 101/124 (81.45%), Query Frame = 1
Query: 244 IRAMMLFVVAVYVGTMYPRLNHTTANLTEMSGAAFFNVWCVLFAVISATPSFVVDRRVALEEMLNGAYGPATHCLAQFVASMPFTAASAFIYQAIFHFIVGFNDSFESYMFASLLTITLLLMME 615
+R + L VVA++VGT+YPRL+ TT N+T ++GA+FFN+WCVLFAVI+ATPSFV +RR AL+EMLNGAY +CL Q ++S+P+ A + I QAIF ++VG NDSFESY+++ L+T+ LLLMME
Sbjct: 1085 LRLIELIVVALFVGTIYPRLDLTTDNITNIAGASFFNLWCVLFAVIAATPSFVTERRTALQEMLNGAYTAPMYCLGQLLSSLPYQCAISIIVQAIFQYLVGLNDSFESYVYSVLITVALLLMME 1208
BLAST of mRNA_P-wetherbeei_contig2055.4.1 vs. uniprot
Match: A0A6H5KA38_9PHAE (ABC protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA38_9PHAE) HSP 1 Score: 140 bits (353), Expect = 1.880e-33 Identity = 68/123 (55.28%), Postives = 90/123 (73.17%), Query Frame = 1
Query: 247 RAMMLFVVAVYVGTMYPRLNHTTANLTEMSGAAFFNVWCVLFAVISATPSFVVDRRVALEEMLNGAYGPATHCLAQFVASMPFTAASAFIYQAIFHFIVGFNDSFESYMFASLLTITLLLMME 615
R + L V+A++VGTMY RL + E + AAFFN+WC LFAV+++ P+F DRR L+EMLNGAYGP +C QF+AS PF SA +YQ+IFH++VGFNDS +Y++A LLT +LL MME
Sbjct: 124 RILELIVLAIFVGTMYFRLGKD--RIAETAAAAFFNMWCALFAVVASVPAFARDRRRILQEMLNGAYGPTMYCCTQFLASAPFILVSALVYQSIFHWLVGFNDSVYAYIYAVLLTASLLFMME 244
BLAST of mRNA_P-wetherbeei_contig2055.4.1 vs. uniprot
Match: D7G3V1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3V1_ECTSI) HSP 1 Score: 140 bits (353), Expect = 1.340e-31 Identity = 68/123 (55.28%), Postives = 90/123 (73.17%), Query Frame = 1
Query: 247 RAMMLFVVAVYVGTMYPRLNHTTANLTEMSGAAFFNVWCVLFAVISATPSFVVDRRVALEEMLNGAYGPATHCLAQFVASMPFTAASAFIYQAIFHFIVGFNDSFESYMFASLLTITLLLMME 615
R + L V+A++VGTMY RL + E + AAFFN+WC LFAV+++ P+F DRR L+EMLNGAYGP +C QF+AS PF SA +YQ+IFH++VGFNDS +Y++A LLT +LL MME
Sbjct: 1001 RILELIVLAIFVGTMYFRLGKD--RIAETAAAAFFNMWCALFAVVASVPAFARDRRRILQEMLNGAYGPTMYCCTQFLASAPFILVSALVYQSIFHWLVGFNDSVYAYIYAVLLTASLLFMME 1121
BLAST of mRNA_P-wetherbeei_contig2055.4.1 vs. uniprot
Match: A0A7S3XXQ2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXQ2_HETAK) HSP 1 Score: 99.4 bits (246), Expect = 1.420e-20 Identity = 53/129 (41.09%), Postives = 79/129 (61.24%), Query Frame = 1
Query: 229 PSCRRIRAMMLFVVAVYVGTMYPRLNHTTANLTEMSGAAFFNVWCVLFAVISATPSFVVDRRVALEEMLNGAYGPATHCLAQFVASMPFTAASAFIYQAIFHFIVGFNDSFESYMFASLLTITLLLMME 615
P+ +RA L V+ +++GT++ RL H T + E++GA FF +WC+LF+ ++A P +V RR L+E+L GAY AQ VAS+ F A +QA+ HF+V F DS + + LL LLL+ME
Sbjct: 11 PAAYPVRAAELLVMGLFIGTVFFRLKHRTDWMLELTGAFFFEIWCLLFSTMAAAPVYVRVRRQVLQEVLAGAYPMWMSSAAQGVASLLFNGVIALGFQAVVHFLVHFGDSASVFGYLVLLAWQLLLLME 139
BLAST of mRNA_P-wetherbeei_contig2055.4.1 vs. uniprot
Match: A9UWA1_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UWA1_MONBE) HSP 1 Score: 97.8 bits (242), Expect = 5.340e-18 Identity = 46/128 (35.94%), Postives = 82/128 (64.06%), Query Frame = 1
Query: 232 SCRRIRAMMLFVVAVYVGTMYPRLNHTTANLTEMSGAAFFNVWCVLFAVISATPSFVVDRRVALEEMLNGAYGPATHCLAQFVASMPFTAASAFIYQAIFHFIVGFNDSFESYMFASLLTITLLLMME 615
S ++R ++ ++A+++GT+Y R+ +T N+ E++GAAFF+++ +LF ++ DR V + + + +T LAQF A++P+T A A +YQ IFH++ G NDSF S+++ LL + L +ME
Sbjct: 317 SVYQMRILLYAIMAIFLGTLYLRIGESTNNVPEIAGAAFFSIYVILFFSVANVAVHSFDRFVMVNGYASNQFALSTWSLAQFTAALPYTLAGALVYQLIFHWLAGLNDSFASFIYQVLLAMVLQWVME 444
BLAST of mRNA_P-wetherbeei_contig2055.4.1 vs. uniprot
Match: A9UYA4_MONBE (Predicted protein n=1 Tax=Monosiga brevicollis TaxID=81824 RepID=A9UYA4_MONBE) HSP 1 Score: 97.8 bits (242), Expect = 1.210e-17 Identity = 45/123 (36.59%), Postives = 78/123 (63.41%), Query Frame = 1
Query: 247 RAMMLFVVAVYVGTMYPRLNHTTANLTEMSGAAFFNVWCVLFAVISATPSFVVDRRVALEEMLNGAYGPATHCLAQFVASMPFTAASAFIYQAIFHFIVGFNDSFESYMFASLLTITLLLMME 615
RA+ V+A+++GT++ RL+HTTA + E+SGAAFF ++ ++F +S+ + DR V + Y T LAQF+ ++P+T A +Q +FH++ G NDSF+++++ L + L +ME
Sbjct: 895 RAVAYIVLALFLGTLFLRLDHTTARIPEISGAAFFAIYMIMFVTVSSVATHTSDRFVMAHAYASNQYKLKTWTLAQFLGALPYTVLGAVAFQVVFHWLGGLNDSFDAFIYQVLANVVLQWVME 1017
BLAST of mRNA_P-wetherbeei_contig2055.4.1 vs. uniprot
Match: A0A7S3XXQ9_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXQ9_HETAK) HSP 1 Score: 92.0 bits (227), Expect = 1.940e-17 Identity = 48/111 (43.24%), Postives = 71/111 (63.96%), Query Frame = 1
Query: 283 GTMYPRLNHTTANLTEMSGAAFFNVWCVLFAVISATPSFVVDRRVALEEMLNGAYGPATHCLAQFVASMPFTAASAFIYQAIFHFIVGFNDSFESYMFASLLTITLLLMME 615
GT++ R+ H T L E+SGA F+N+WC +FA ++A P++ V RR L+E+L GAY +AQ VAS + A A +YQAI H++VGFND+ + + + LLLM +
Sbjct: 1 GTIFLRVPHRTGWLLEISGAFFWNIWCAVFACLAAAPTYCVVRRQVLQEVLAGAYPMHMANVAQAVASFVYNGAIALVYQAIMHYLVGFNDAGGVFGYFVAQSWQLLLMFD 111
BLAST of mRNA_P-wetherbeei_contig2055.4.1 vs. uniprot
Match: A0A7S2UVT5_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UVT5_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 1.880e-7 Identity = 30/61 (49.18%), Postives = 40/61 (65.57%), Query Frame = 1
Query: 433 LNGAYGPATHCLAQFVASMPFTAASAFIYQAIFHFIVGFNDSFESYMFASLLTITLLLMME 615
+NGAY T A FVAS+PF + YQAIFH++VGFNDSFE Y + LT+ +++E
Sbjct: 1 INGAYSVHTWAAANFVASLPFILGVSIFYQAIFHYLVGFNDSFEVYACSVFLTVLTQVIVE 61
BLAST of mRNA_P-wetherbeei_contig2055.4.1 vs. uniprot
Match: A0A165M4B6_9APHY (Uncharacterized protein n=1 Tax=Daedalea quercina L-15889 TaxID=1314783 RepID=A0A165M4B6_9APHY) HSP 1 Score: 57.0 bits (136), Expect = 8.710e-5 Identity = 33/123 (26.83%), Postives = 58/123 (47.15%), Query Frame = 1
Query: 244 IRAMMLFVVAVYVGTMYPRLNHTTANLTEMSGAAFFNVWCVLFAVISATPSFVVDRRVALEEMLNGAYGPATHCLAQFVASMPFTAASAFIYQAIFHFIVGFNDS----FESYMFASLLTITL 600
I+AM + A+ VGT++ RL +TTA G FF++ + ++ P+ + R + Y P LA + +P TA + ++ I +F+VG + F +F +TIT+
Sbjct: 533 IQAMSFVLQAIIVGTIFLRLQNTTATFFSKGGVLFFSLLFAALSTMAEIPALFIQRPIVQRHARAAMYHPFVEALALTLVDVPMTAITLILFCVILYFLVGLQVNPGKFFTFLLFVFTMTITM 655 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2055.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig2055.4.1 >prot_P-wetherbeei_contig2055.4.1 ID=prot_P-wetherbeei_contig2055.4.1|Name=mRNA_P-wetherbeei_contig2055.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=196bp MPIPSCRRIRAMMLFVVAVYVGTMYPRLNHTTANLTEMSGAAFFNVWCVLback to top mRNA from alignment at P-wetherbeei_contig2055:3503..6060- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig2055.4.1 ID=mRNA_P-wetherbeei_contig2055.4.1|Name=mRNA_P-wetherbeei_contig2055.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2558bp|location=Sequence derived from alignment at P-wetherbeei_contig2055:3503..6060- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig2055:3503..6060- >mRNA_P-wetherbeei_contig2055.4.1 ID=mRNA_P-wetherbeei_contig2055.4.1|Name=mRNA_P-wetherbeei_contig2055.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=588bp|location=Sequence derived from alignment at P-wetherbeei_contig2055:3503..6060- (Phaeothamnion wetherbeei SAG_119_79)back to top |