mRNA_P-wetherbeei_contig20529.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20529.1.1 vs. uniprot
Match: A0A3C2B6R9_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C2B6R9_9ACTN) HSP 1 Score: 231 bits (588), Expect = 6.200e-73 Identity = 121/191 (63.35%), Postives = 146/191 (76.44%), Query Frame = 1
Query: 1 SGAVPDSQWRRFAAAVGDLSEQLAVRRMVALGAYPFAAPHTRPARLSSTSPSAQVSASVPYLKNSVDVPAGMGAVLEHELHGRGITALGLWAQVPHYVSSMSYPDASVALLTGLREMAGLEIDGAATRTEAERQRRRLDQLVAGNEEHQGMVRQLEELYDTSAQQTLSLGIADIPSGDQIAAEFEAFLRDQ 573
SG PDSQW+RFAA+V +L+ +L V +MVALGAYPF PHTRP RLSS+SPSA V A+VPYLK+SVDVPAGM AVLEH L G+ +LG+W QVPHYVS+MSYP+ASVALL GLRE+ G+ + + QR R+D+LV N++H MVR LE YD A Q+LSLG AD+PSGD +AAEFE FLRDQ
Sbjct: 98 SGPEPDSQWKRFAASVAELATRLGVYQMVALGAYPFGCPHTRPPRLSSSSPSADVVANVPYLKSSVDVPAGMSAVLEHALTEAGVPSLGVWVQVPHYVSAMSYPEASVALLAGLREVTGITVRTDDLAADGALQRARIDRLVEANDDHATMVRGLEVAYDALADQSLSLGSADLPSGDDLAAEFERFLRDQ 288
BLAST of mRNA_P-wetherbeei_contig20529.1.1 vs. uniprot
Match: A0A7K1B822_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A7K1B822_9ACTN) HSP 1 Score: 222 bits (566), Expect = 1.910e-69 Identity = 122/198 (61.62%), Postives = 144/198 (72.73%), Query Frame = 1
Query: 1 SGAVPDSQWRRFAAAVGDLSEQLAVRRMVALGAYPFAAPHTRPARLSSTSPSAQVSASVPYLKNSVDVPAGMGAVLEHELHGRGITALGLWAQVPHYVSSMSYPDASVALLTGLREMAGLEIDGAATRTEAERQRRRLDQLVAGNEEHQGMVRQLEELYDTSAQQTLSLGI-----ADIPSGDQIAAEFEAFLRDQDD 579
SG PD+ WRRFA DL+ +L VR V LGAYPFAAPHTRP+RLSS+SPSA++ A+VP+LKNSVDVPAGMGAVLEH +G+ ALG+WAQVPHY+ +MS+P ASVALL GL ++ GL ID A EAE QR R+DQLV GN EH+ MV QLE +YD S T S ++PSGD IAAE E FLRDQ D
Sbjct: 105 SGPEPDAAWRRFADLATDLAIELGVRIAVVLGAYPFAAPHTRPSRLSSSSPSAELIATVPFLKNSVDVPAGMGAVLEHAFVAKGVPALGIWAQVPHYLGAMSHPAASVALLDGLEQVTGLVIDRATLAGEAEIQRLRVDQLVEGNAEHRAMVEQLETVYDASEPATASAAFDAALSGELPSGDDIAAEVERFLRDQGD 302
BLAST of mRNA_P-wetherbeei_contig20529.1.1 vs. uniprot
Match: A0A6I3WN72_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6I3WN72_9ACTN) HSP 1 Score: 221 bits (562), Expect = 9.280e-68 Identity = 117/200 (58.50%), Postives = 147/200 (73.50%), Query Frame = 1
Query: 1 SGAVPDSQWRRFAAAVGDLSEQLAVRRMVALGAYPFAAPHTRPARLSSTSPSAQVSASVPYLKNSVDVPAGMGAVLEHELHGRGITALGLWAQVPHYVSSMSYPDASVALLTGLREMAGLEIDGAATRTEAERQRRRLDQLVAGNEEHQGMVRQLEELYDTSAQQTLSLGI-------ADIPSGDQIAAEFEAFLRDQDD 579
+G PD W+RF L +L V+RMVALGA+PFA+PHTR ARLS +SPS + + LKNS+DVPAG+ AVLEH H +GI ALG+W QVPHY+SSM+YP A+VALLTGL + AGL IDGAA R E QR+RLD+LVAGN+EH+ MV +LE+LYD S QQTL + A+IP+GD++AAE E +LRDQ+D
Sbjct: 189 TGPEPDMAWQRFGREAASLGVRLGVKRMVALGAHPFASPHTRQARLSISSPSPALVEELRMLKNSIDVPAGVAAVLEHSFHQQGIDALGIWVQVPHYISSMAYPAATVALLTGLNQAAGLRIDGAAARQETVIQRQRLDELVAGNDEHRAMVAELEKLYDNSEQQTLQGALPTTQFTAAEIPTGDELAAELEQYLRDQND 388
BLAST of mRNA_P-wetherbeei_contig20529.1.1 vs. uniprot
Match: A0A6I3EXW6_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A6I3EXW6_9ACTN) HSP 1 Score: 207 bits (527), Expect = 1.400e-63 Identity = 113/202 (55.94%), Postives = 143/202 (70.79%), Query Frame = 1
Query: 1 SGAVPDSQWRRFAAAVGDLSEQLAVRRMVALGAYPFAAPHTRPARLSSTSPSAQVSASVPYLKNSVDVPAGMGAVLEHELHGRGITALGLWAQVPHYVSSMSYPDASVALLTGLREMAGLEIDGAATRTEAERQRRRLDQLVAGNEEHQGMVRQLEELYDTSAQQTLS---------LGIADIPSGDQIAAEFEAFLRDQDD 579
+G PDSQW+ FA+AV L+ QL V +MV+LGAYPFA+PHTR +R+S TSPSA + A+ PY K+++DVPAGM AVLEH L G+ +LGLW Q+PHYVS+MSYP ASV LL GL E G++I EA QR+R+DQLV N+EH MVRQLE LYD + +Q + L D+P+GD +AAEFE FLRDQD+
Sbjct: 99 TGPEPDSQWKTFASAVTQLALQLGVYQMVSLGAYPFASPHTRASRMSCTSPSADLIANSPYEKSTLDVPAGMSAVLEHALTEAGVPSLGLWVQIPHYVSAMSYPAASVVLLRGLGEATGIDIPYHELEREALVQRQRIDQLVESNDEHGAMVRQLEALYDQAERQAVQQAADQARDELASGDLPTGDDLAAEFERFLRDQDE 300
BLAST of mRNA_P-wetherbeei_contig20529.1.1 vs. uniprot
Match: A0A848UH62_9ACTN (PAC2 family protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A848UH62_9ACTN) HSP 1 Score: 206 bits (524), Expect = 3.540e-63 Identity = 109/195 (55.90%), Postives = 138/195 (70.77%), Query Frame = 1
Query: 1 SGAVPDSQWRRFAAAVGDLSEQLAVRRMVALGAYPFAAPHTRPARLSSTSPSAQVSASVPYLKNSVDVPAGMGAVLEHELHGRGITALGLWAQVPHYVSSMSYPDASVALLTGLREMAGLEIDGAATRTEAERQRRRLDQLVAGNEEHQGMVRQLEELYDTSAQQTLSLGIA---DIPSGDQIAAEFEAFLRDQD 576
+G PD W RF AVG+++ QL VR+MV LGAYPFA PHTR RLS +SPS V + V +L++S+DVPAG+ A LE E+H R + ALG+WAQVPHY+S MSYP ASVALL GLRE GL DGA R+E Q +RLDQLVAGN EH+ M+ QLE++YD S + + ++ SGD++A E + FLRDQD
Sbjct: 102 AGPEPDMAWHRFTRAVGEVATQLGVRQMVHLGAYPFAVPHTRSPRLSVSSPSQDVLSRVSFLRSSIDVPAGVAAALEREMHDRSVPALGIWAQVPHYISGMSYPAASVALLDGLREATGLVFDGATLRSEVLIQGQRLDQLVAGNAEHEQMLEQLEQIYDASDDTISTFDVGPGLEMRSGDELAEELQQFLRDQD 296
BLAST of mRNA_P-wetherbeei_contig20529.1.1 vs. uniprot
Match: A0A7K0VK32_9ACTN (Uncharacterized protein n=2 Tax=root TaxID=1 RepID=A0A7K0VK32_9ACTN) HSP 1 Score: 206 bits (523), Expect = 5.010e-63 Identity = 110/195 (56.41%), Postives = 142/195 (72.82%), Query Frame = 1
Query: 4 GAVPDSQWRRFAAAVGDLSEQLAVRRMVALGAYPFAAPHTRPARLSSTSPSAQVSASVPYLKNSVDVPAGMGAVLEHELHGRGITALGLWAQVPHYVSSMSYPDASVALLTGLREMAGLEIDGAATRTEAERQRRRLDQLVAGNEEHQGMVRQLEELYDTSAQQTLS---LGIADIPSGDQIAAEFEAFLRDQDD 579
G PD WR FA V L L VRRMVALGAYPFA+PHTRPARLS ++PSA++ AS+ KNSVDVPAG+ +VLEH H I +LGLW QVPHY+++M++P A+V+LLTGL + G+ +DGAA R E QR RLD+LVAGN++H+ MVRQLE +YD+ S A+IP+GD++AAE E +LRDQ++
Sbjct: 101 GPEPDMAWRCFAREVAALGVALGVRRMVALGAYPFASPHTRPARLSVSAPSAELVASLHLQKNSVDVPAGVASVLEHAFHDASIESLGLWVQVPHYIATMAFPAATVSLLTGLGQYGGVRVDGAAPRQETAIQRERLDELVAGNDDHREMVRQLEAVYDSVENHPSSDRRFTDAEIPTGDELAAELEQYLRDQNE 295
BLAST of mRNA_P-wetherbeei_contig20529.1.1 vs. uniprot
Match: A0A2E3TV48_9ACTN (Uncharacterized protein n=1 Tax=Ilumatobacter sp. TaxID=1967498 RepID=A0A2E3TV48_9ACTN) HSP 1 Score: 205 bits (522), Expect = 9.230e-63 Identity = 110/196 (56.12%), Postives = 137/196 (69.90%), Query Frame = 1
Query: 4 GAVPDSQWRRFAAAVGDLSEQLAVRRMVALGAYPFAAPHTRPARLSSTSPSAQVSASVPYLKNSVDVPAGMGAVLEHELHGRGITALGLWAQVPHYVSSMSYPDASVALLTGLREMAGLEIDGAATRTEAERQRRRLDQLVAGNEEHQGMVRQLEELYDTSAQQTLSLGIAD----IPSGDQIAAEFEAFLRDQDD 579
G PD WRRF+ A+GD++ +L V M+ GAYPFAAPHTR RLS +SPS V A+VP+ ++SVDVPAGM A LEH +H R I ALG+WAQVPHYVSSM+YP +SVALL GL E G+ I GA+ R E + QR R+DQ+VA N +HQ MV QLE L+D + + A + SGD+IAAE + FLRDQ D
Sbjct: 109 GPEPDMNWRRFSNAIGDIAVELGVTHMIGFGAYPFAAPHTRTPRLSCSSPSVDVLANVPFARSSVDVPAGMAAALEHTMHDRKIPALGIWAQVPHYVSSMTYPASSVALLDGLAEATGVRIAGASLRNEIDIQRERIDQMVADNVDHQLMVTQLESLHDAAVEDDADAADAAAEMRLKSGDEIAAEIQEFLRDQPD 304
BLAST of mRNA_P-wetherbeei_contig20529.1.1 vs. uniprot
Match: A0A4P5QZ74_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A4P5QZ74_9ACTN) HSP 1 Score: 205 bits (521), Expect = 1.100e-62 Identity = 106/191 (55.50%), Postives = 140/191 (73.30%), Query Frame = 1
Query: 1 SGAVPDSQWRRFAAAVGDLSEQLAVRRMVALGAYPFAAPHTRPARLSSTSPSAQVSASVPYLKNSVDVPAGMGAVLEHELHGRGITALGLWAQVPHYVSSMSYPDASVALLTGLREMAGLEIDGAATRTEAERQRRRLDQLVAGNEEHQGMVRQLEELYDTSAQQTLSLGIADIPSGDQIAAEFEAFLRDQ 573
+G PDS+W +FAA+VG+L+ QL VR+M+ LGAYPFA PHTR LS TSPS+ S+PY+++SVDVPAG+ AVLEH L GRGI ++G+WAQVPHY ++M YP A+VALL + + G+ +D +A R +A R RLD LVA N EH ++ QLE YD + Q+ ADIPSGD++AA+FEA+LRDQ
Sbjct: 108 TGHEPDSRWNQFAASVGELATQLGVRKMIGLGAYPFATPHTRAVNLSCTSPSSDAIVSLPYVRSSVDVPAGIEAVLEHVLTGRGIPSIGIWAQVPHYATTMPYPAATVALLGAVCDTGGISLDVSAARADASAHRERLDTLVASNPEHAQLLSQLESAYDAAHQRDDDT--ADIPSGDELAAQFEAYLRDQ 296
BLAST of mRNA_P-wetherbeei_contig20529.1.1 vs. uniprot
Match: A0A7W1HHL9_9ACTN (PAC2 family protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W1HHL9_9ACTN) HSP 1 Score: 203 bits (516), Expect = 5.540e-62 Identity = 112/198 (56.57%), Postives = 134/198 (67.68%), Query Frame = 1
Query: 1 SGAVPDSQWRRFAAAVGDLSEQLAVRRMVALGAYPFAAPHTRPARLSSTSPSAQVSASVPYLKNSVDVPAGMGAVLEHELHGRGITALGLWAQVPHYVSSMSYPDASVALLTGLREMAGLEIDGAATRTEAERQRRRLDQLVAGNEEHQGMVRQLEELYDTSAQQTLSL-------GIADIPSGDQIAAEFEAFLRDQ 573
SG PD W RFAA +G+L+ L VRRM ALGAYPFA PHTRP +LS+TSPS V A +P+ +SVDVPAGM A LE LH RGI A+G+WAQVPHYV++MSYP ASVALL GL G+ I R EA QR RLDQL+ GNEEH MV Q E LYD + + + G ++ SGD++AAE E FLR+Q
Sbjct: 92 SGPEPDMAWHRFAATIGELAAGLNVRRMAALGAYPFATPHTRPVQLSATSPSKDVLAGLPFRTSSVDVPAGMAAALEQSLHDRGIPAIGVWAQVPHYVATMSYPAASVALLDGLATATGIAIGAGDLRREAVLQRERLDQLIEGNEEHLAMVSQFERLYDAALESDGAPDEGQPGDGELEMRSGDELAAEVERFLREQ 289
BLAST of mRNA_P-wetherbeei_contig20529.1.1 vs. uniprot
Match: A0A4P5RD62_9ACTN (Uncharacterized protein n=5 Tax=Actinobacteria TaxID=201174 RepID=A0A4P5RD62_9ACTN) HSP 1 Score: 202 bits (514), Expect = 9.880e-62 Identity = 105/193 (54.40%), Postives = 135/193 (69.95%), Query Frame = 1
Query: 1 SGAVPDSQWRRFAAAVGDLSEQLAVRRMVALGAYPFAAPHTRPARLSSTSPSAQVSASVPYLKNSVDVPAGMGAVLEHELHGRGITALGLWAQVPHYVSSMSYPDASVALLTGLREMAGLEIDGAATRTEAERQRRRLDQLVAGNEEHQGMVRQLEELYDTS-AQQTLSLGI-ADIPSGDQIAAEFEAFLRDQ 573
+G PD+ W FA + D+S Q VRRM+ +GAYPFA PHTR +S TSP + +S+PYLK+SVDVPAGM A +EH LHGR I AL LWA+VPHYV+SM YP AS ALL L + G+ +D ++ R +A+ QR RLDQL++GN EH M+ QLE+ +D A T + A IPSGD+IAAEFE +LRD+
Sbjct: 99 TGPEPDTHWNLFAETIADISVQFGVRRMIGIGAYPFATPHTRAVYISCTSPDKDLVSSLPYLKSSVDVPAGMAAAIEHSLHGRKIQALSLWARVPHYVASMPYPAASAALLAALCDTGGISLDASSMREQAKTQRERLDQLISGNNEHSQMLTQLEQAFDEQIANGTTEINFGAPIPSGDEIAAEFEKYLRDR 291 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20529.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20529.1.1 >prot_P-wetherbeei_contig20529.1.1 ID=prot_P-wetherbeei_contig20529.1.1|Name=mRNA_P-wetherbeei_contig20529.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=194bp SGAVPDSQWRRFAAAVGDLSEQLAVRRMVALGAYPFAAPHTRPARLSSTSback to top mRNA from alignment at P-wetherbeei_contig20529:3..584+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20529.1.1 ID=mRNA_P-wetherbeei_contig20529.1.1|Name=mRNA_P-wetherbeei_contig20529.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=582bp|location=Sequence derived from alignment at P-wetherbeei_contig20529:3..584+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20529:3..584+ >mRNA_P-wetherbeei_contig20529.1.1 ID=mRNA_P-wetherbeei_contig20529.1.1|Name=mRNA_P-wetherbeei_contig20529.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=582bp|location=Sequence derived from alignment at P-wetherbeei_contig20529:3..584+ (Phaeothamnion wetherbeei SAG_119_79)back to top |