mRNA_P-wetherbeei_contig20461.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20461.1.1 vs. uniprot
Match: A0A1X2H908_SYNRA (Thioredoxin n=1 Tax=Syncephalastrum racemosum TaxID=13706 RepID=A0A1X2H908_SYNRA) HSP 1 Score: 68.9 bits (167), Expect = 7.410e-14 Identity = 30/54 (55.56%), Postives = 37/54 (68.52%), Query Frame = 1
Query: 1 MREVRDAADFATLINSGPLVVLDFTATWCGPCKRVSPLFDALAPRYPDCTFAKV 162
MREV+D +F LI S + +DFTATWCGPCK + P+F+ LA YPD T KV
Sbjct: 1 MREVKDLEEFNELIKSDKVTAVDFTATWCGPCKVIGPIFEKLAEEYPDYTCIKV 54
BLAST of mRNA_P-wetherbeei_contig20461.1.1 vs. uniprot
Match: A0A7S2TE80_PROMC (Thioredoxin n=1 Tax=Prorocentrum micans TaxID=2945 RepID=A0A7S2TE80_PROMC) HSP 1 Score: 67.4 bits (163), Expect = 3.070e-13 Identity = 27/54 (50.00%), Postives = 39/54 (72.22%), Query Frame = 1
Query: 1 MREVRDAADFATLINSGPLVVLDFTATWCGPCKRVSPLFDALAPRYPDCTFAKV 162
+R++ +F TL++ G +V++DFTATWCGPCK +SP F+ L+ Y D TF KV
Sbjct: 2 VRQIATLEEFNTLVSEGKVVMIDFTATWCGPCKMISPEFERLSGEYTDITFVKV 55
BLAST of mRNA_P-wetherbeei_contig20461.1.1 vs. uniprot
Match: A0A4D9D704_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9D704_9STRA) HSP 1 Score: 70.1 bits (170), Expect = 1.050e-12 Identity = 28/54 (51.85%), Postives = 40/54 (74.07%), Query Frame = 1
Query: 1 MREVRDAADFATLINSGPLVVLDFTATWCGPCKRVSPLFDALAPRYPDCTFAKV 162
++E+ A+ ++ SG LVV+DFTA+WCGPC+ +P F+A+A RYPD FAKV
Sbjct: 2 VQEITSGAELRRMVGSGRLVVIDFTASWCGPCRMAAPQFEAMARRYPDVVFAKV 55
BLAST of mRNA_P-wetherbeei_contig20461.1.1 vs. uniprot
Match: A0A4R0RA33_9APHY (Thioredoxin n=1 Tax=Steccherinum ochraceum TaxID=92696 RepID=A0A4R0RA33_9APHY) HSP 1 Score: 65.9 bits (159), Expect = 1.240e-12 Identity = 27/46 (58.70%), Postives = 37/46 (80.43%), Query Frame = 1
Query: 25 DFATLINSGPLVVLDFTATWCGPCKRVSPLFDALAPRYPDCTFAKV 162
+F TLINSG +VV+DF ATWCGPC+ +SP+F+ LA ++P+ F KV
Sbjct: 11 EFQTLINSGKVVVVDFWATWCGPCRVISPIFEKLAAQFPNIEFRKV 56
BLAST of mRNA_P-wetherbeei_contig20461.1.1 vs. uniprot
Match: A0A507FKZ5_9FUNG (Thioredoxin domain-containing protein n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507FKZ5_9FUNG) HSP 1 Score: 67.0 bits (162), Expect = 1.740e-12 Identity = 27/51 (52.94%), Postives = 36/51 (70.59%), Query Frame = 1
Query: 10 VRDAADFATLINSGPLVVLDFTATWCGPCKRVSPLFDALAPRYPDCTFAKV 162
+ ++F IN L V+DFTATWCGPCK V+P F+ALA ++P+C F KV
Sbjct: 8 ITSESEFTRYINGSKLTVVDFTATWCGPCKAVAPRFEALAGKFPNCNFIKV 58
BLAST of mRNA_P-wetherbeei_contig20461.1.1 vs. uniprot
Match: A0A370PLY1_ASPPH (Thioredoxin n=8 Tax=Aspergillus TaxID=5052 RepID=A0A370PLY1_ASPPH) HSP 1 Score: 65.1 bits (157), Expect = 2.490e-12 Identity = 29/53 (54.72%), Postives = 37/53 (69.81%), Query Frame = 1
Query: 10 VRDAADFATLINSGPLVVLDFTATWCGPCKRVSPLFDALA--PRYPDCTFAKV 162
+ +DF TLINSG +V++DF ATWCGPCK +SP F+ LA P + FAKV
Sbjct: 6 IESISDFRTLINSGDVVIIDFWATWCGPCKMISPFFEQLASRPEFSAIKFAKV 58
BLAST of mRNA_P-wetherbeei_contig20461.1.1 vs. uniprot
Match: A0A7S2T243_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A7S2T243_9CHLO) HSP 1 Score: 65.5 bits (158), Expect = 2.760e-12 Identity = 25/51 (49.02%), Postives = 36/51 (70.59%), Query Frame = 1
Query: 10 VRDAADFATLINSGPLVVLDFTATWCGPCKRVSPLFDALAPRYPDCTFAKV 162
++ A F ++ G VV+DFTATWCGPC+R++P F+ L+ +YP TF KV
Sbjct: 31 IKSEAQFNDIVAKGGAVVIDFTATWCGPCQRIAPFFEELSTKYPSVTFVKV 81
BLAST of mRNA_P-wetherbeei_contig20461.1.1 vs. uniprot
Match: C1EA57_MICCC (Thioredoxin n=2 Tax=Micromonas TaxID=38832 RepID=C1EA57_MICCC) HSP 1 Score: 64.7 bits (156), Expect = 3.450e-12 Identity = 25/54 (46.30%), Postives = 37/54 (68.52%), Query Frame = 1
Query: 1 MREVRDAADFATLINSGPLVVLDFTATWCGPCKRVSPLFDALAPRYPDCTFAKV 162
++ + A +FATL V++DFTA+WCGPCK++ P F+ LA +YPD F K+
Sbjct: 2 VKMIESAEEFATLKKGDKPVLVDFTASWCGPCKKIGPFFEELAAKYPDVVFVKI 55
BLAST of mRNA_P-wetherbeei_contig20461.1.1 vs. uniprot
Match: A0A5B8MYQ1_9CHLO (Thioredoxin n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8MYQ1_9CHLO) HSP 1 Score: 64.7 bits (156), Expect = 4.480e-12 Identity = 25/51 (49.02%), Postives = 36/51 (70.59%), Query Frame = 1
Query: 10 VRDAADFATLINSGPLVVLDFTATWCGPCKRVSPLFDALAPRYPDCTFAKV 162
++ F +I +G VV+DFTATWCGPC+R++P F+ L+ +YP TF KV
Sbjct: 16 IKSEEQFNEIIGAGKPVVIDFTATWCGPCQRIAPFFEELSTKYPSVTFVKV 66
BLAST of mRNA_P-wetherbeei_contig20461.1.1 vs. uniprot
Match: A0A1L0D2J4_9ASCO (CIC11C00000005658 n=2 Tax=[Candida] intermedia TaxID=45354 RepID=A0A1L0D2J4_9ASCO) HSP 1 Score: 65.1 bits (157), Expect = 5.790e-12 Identity = 29/53 (54.72%), Postives = 38/53 (71.70%), Query Frame = 1
Query: 7 EVRDAADFATLI-NSGPLVVLDFTATWCGPCKRVSPLFDALAPRYPDCTFAKV 162
EVRD FA+++ N V+DF ATWCGPCK ++P+FDALA R P+ FA+V
Sbjct: 36 EVRDLKQFASIVANKEKATVVDFYATWCGPCKAIAPVFDALAERVPEAQFARV 88 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20461.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20461.1.1 >prot_P-wetherbeei_contig20461.1.1 ID=prot_P-wetherbeei_contig20461.1.1|Name=mRNA_P-wetherbeei_contig20461.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=54bp MREVRDAADFATLINSGPLVVLDFTATWCGPCKRVSPLFDALAPRYPDCTback to top mRNA from alignment at P-wetherbeei_contig20461:37..198- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20461.1.1 ID=mRNA_P-wetherbeei_contig20461.1.1|Name=mRNA_P-wetherbeei_contig20461.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=162bp|location=Sequence derived from alignment at P-wetherbeei_contig20461:37..198- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20461:37..198- >mRNA_P-wetherbeei_contig20461.1.1 ID=mRNA_P-wetherbeei_contig20461.1.1|Name=mRNA_P-wetherbeei_contig20461.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=162bp|location=Sequence derived from alignment at P-wetherbeei_contig20461:37..198- (Phaeothamnion wetherbeei SAG_119_79)back to top |