mRNA_P-wetherbeei_contig20460.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20460.1.1 vs. uniprot
Match: A0A7Y3GKR2_9DELT (Response regulator n=1 Tax=Desulfobacterales bacterium TaxID=2044940 RepID=A0A7Y3GKR2_9DELT) HSP 1 Score: 110 bits (276), Expect = 4.520e-29 Identity = 56/116 (48.28%), Postives = 78/116 (67.24%), Query Frame = 1
Query: 1 KVLIVDDDESMRLMLLHKLNKLGYEVHLASNGFEALTLQKEHGVDLLLTDILMPDKDGLELISEFQNNYPNVKLIAMSGGSRISAQLYLKMATLMGPVGLLPKPFSMGDLELALAE 348
++LI+DD+E MR ML L + GYEV A++G E L + H V+L++TD++MPDK+GLE I EF+ NYP+VK+IAMSGG +I YL +A G L KPF M D+ A+ +
Sbjct: 3 RILIIDDEEMMRGMLRQLLEREGYEVVDAADGAEGLNIHGRHPVELVITDLIMPDKEGLETILEFKQNYPDVKVIAMSGGGKIGPDNYLNLAEKFGAQCTLTKPFLMKDVLEAVGQ 118
BLAST of mRNA_P-wetherbeei_contig20460.1.1 vs. uniprot
Match: A0A7C1VE42_9BACE (Response regulator n=1 Tax=Bacteroides sp. TaxID=29523 RepID=A0A7C1VE42_9BACE) HSP 1 Score: 110 bits (275), Expect = 6.590e-29 Identity = 58/116 (50.00%), Postives = 77/116 (66.38%), Query Frame = 1
Query: 1 KVLIVDDDESMRLMLLHKLNKLGYEVHLASNGFEALTLQKEHGVDLLLTDILMPDKDGLELISEFQNNYPNVKLIAMSGGSRISAQLYLKMATLMGPVGLLPKPFSMGDLELALAE 348
K+LI+DD+ + LML L K GYEV+LASNG E + L ++ DL++TDI+MPDK+GLELI E + P +K+IAMSGG RIS + YL+ A G + KPF DL A+ E
Sbjct: 3 KILIIDDEPYILLMLKKMLEKAGYEVNLASNGREGMALFEKASADLVITDIIMPDKEGLELILEMKKQRPALKIIAMSGGGRISPESYLECAKHFGAEKVFQKPFRQKDLISAVKE 118
BLAST of mRNA_P-wetherbeei_contig20460.1.1 vs. uniprot
Match: A0A0S8KI36_9BACE (Response regulatory domain-containing protein n=1 Tax=Bacteroides sp. SM1_62 TaxID=1703351 RepID=A0A0S8KI36_9BACE) HSP 1 Score: 110 bits (275), Expect = 6.590e-29 Identity = 58/116 (50.00%), Postives = 78/116 (67.24%), Query Frame = 1
Query: 1 KVLIVDDDESMRLMLLHKLNKLGYEVHLASNGFEALTLQKEHGVDLLLTDILMPDKDGLELISEFQNNYPNVKLIAMSGGSRISAQLYLKMATLMGPVGLLPKPFSMGDLELALAE 348
KVLI+DD+ + LML L K GYEV LASNG E L L ++ DL++TDI+MPDK+GLE+I E + P++K+IA+SGG RIS + YL+ AT G + KPF +L A+ E
Sbjct: 3 KVLIIDDEPYILLMLKKMLEKAGYEVDLASNGKEGLDLFGKNAADLVITDIIMPDKEGLEIILEMKKQRPDLKIIAISGGGRISPESYLECATHFGASRVFQKPFKQKELVSAVNE 118
BLAST of mRNA_P-wetherbeei_contig20460.1.1 vs. uniprot
Match: A0A7C2QVT4_9BACE (Response regulator n=1 Tax=Bacteroides sp. TaxID=29523 RepID=A0A7C2QVT4_9BACE) HSP 1 Score: 110 bits (274), Expect = 1.020e-28 Identity = 53/116 (45.69%), Postives = 81/116 (69.83%), Query Frame = 1
Query: 1 KVLIVDDDESMRLMLLHKLNKLGYEVHLASNGFEALTLQKEHGVDLLLTDILMPDKDGLELISEFQNNYPNVKLIAMSGGSRISAQLYLKMATLMGPVGLLPKPFSMGDLELALAE 348
K+LI+DD+ + +ML L K GYE LASNG E + L K+ DL++TDI+MP+K+GLE I E + +P++K+IAMSGG +ISA+ YL+ A++ G ++ KPF+ ++ A+ E
Sbjct: 3 KILIIDDEPYILMMLKKMLEKAGYETDLASNGKEGMDLFKKDPSDLVITDIIMPEKEGLETIREMKRIHPHLKIIAMSGGGKISAENYLETASIFGATRIIEKPFTQNEMVSAVNE 118
BLAST of mRNA_P-wetherbeei_contig20460.1.1 vs. uniprot
Match: A0A524NY87_9BACT (Response regulator n=1 Tax=Bacteroidia bacterium TaxID=2044936 RepID=A0A524NY87_9BACT) HSP 1 Score: 108 bits (269), Expect = 1.000e-27 Identity = 55/116 (47.41%), Postives = 78/116 (67.24%), Query Frame = 1
Query: 1 KVLIVDDDESMRLMLLHKLNKLGYEVHLASNGFEALTLQKEHGVDLLLTDILMPDKDGLELISEFQNNYPNVKLIAMSGGSRISAQLYLKMATLMGPVGLLPKPFSMGDLELALAE 348
++LI+DDD + LM+ L + GYEV LASNG E + L K DL++TDI+MP+K+GLE I E + P++K+IAMSGG +ISA YL+ A + G +L KPFS + LA+ +
Sbjct: 3 RILIIDDDHHILLMIKKMLERAGYEVDLASNGSEGMELFKRIHADLVITDIIMPEKEGLETIREMKRLRPDLKIIAMSGGGKISADNYLETAKIFGASLVLEKPFSQKTMVLAVID 118
BLAST of mRNA_P-wetherbeei_contig20460.1.1 vs. uniprot
Match: A0A2N2KQZ1_9DELT (Response regulator n=1 Tax=Deltaproteobacteria bacterium HGW-Deltaproteobacteria-10 TaxID=2013737 RepID=A0A2N2KQZ1_9DELT) HSP 1 Score: 107 bits (267), Expect = 1.390e-27 Identity = 50/119 (42.02%), Postives = 79/119 (66.39%), Query Frame = 1
Query: 4 VLIVDDDESMRLMLLHKLNKLGYEVHLASNGFEALTLQKEHGVDLLLTDILMPDKDGLELISEFQNNYPNVKLIAMSGGSRISAQLYLKMATLMGPVGLLPKPFSMGDLELALAEATRV 360
+L++DDD+ +R ML L GY V +A++G EA+ LQ+ + DL+LTDI+MPD +G+E+I+E + YP ++IAMSGG RI+A YL +A +G KPF ++ A++E ++
Sbjct: 8 ILVIDDDDMLRAMLKKLLGNAGYAVDVAADGIEAMKLQQLNPADLILTDIIMPDMEGIEVITELRKKYPATQIIAMSGGGRINADQYLTIARRLGAQKTFVKPFKSSEMLAAVSELLKI 126
BLAST of mRNA_P-wetherbeei_contig20460.1.1 vs. uniprot
Match: A0A353GEU3_9BACT (Response regulator n=1 Tax=Candidatus Sumerlaeota bacterium TaxID=2107588 RepID=A0A353GEU3_9BACT) HSP 1 Score: 107 bits (266), Expect = 2.850e-27 Identity = 46/111 (41.44%), Postives = 77/111 (69.37%), Query Frame = 1
Query: 1 KVLIVDDDESMRLMLLHKLNKLGYEVHLASNGFEALTLQKEHGVDLLLTDILMPDKDGLELISEFQNNYPNVKLIAMSGGSRISAQLYLKMATLMGPVGLLPKPFSMGDLE 333
++L+VDDD+ +R +L H L +LG+EV A+NG EAL L K+ D++ D++MP K+G+E I++F+ +P+ K++AMSGG R+ + YL +A +G + KPF+ G ++
Sbjct: 24 RILVVDDDDQVRTLLQHMLERLGHEVVAATNGNEALRLYKQAPTDMIFMDLIMPGKEGIETITDFRREFPDAKIVAMSGGGRMGPENYLDLAKKLGAQRTMSKPFTFGQVQ 134
BLAST of mRNA_P-wetherbeei_contig20460.1.1 vs. uniprot
Match: D3RNM7_ALLVD (Response regulator receiver protein n=1 Tax=Allochromatium vinosum (strain ATCC 17899 / DSM 180 / NBRC 103801 / NCIMB 10441 / D) TaxID=572477 RepID=D3RNM7_ALLVD) HSP 1 Score: 105 bits (263), Expect = 4.360e-27 Identity = 59/118 (50.00%), Postives = 75/118 (63.56%), Query Frame = 1
Query: 1 KVLIVDDDESMRLMLLHKLNKLGYEVHLASNGFEALTLQKEHGVDLLLTDILMPDKDGLELISEFQNNYPNVKLIAMSGGSR-ISAQLYLKMATLMGPVGLLPKPFSMGDLELALAEA 351
KVLIVDDDE R ML + + GY+V A+NG EAL + DL++TDILMP+KDG+ELI E + +IA+SGG R IS + L+ A LMG LPKPF+ DL A+ EA
Sbjct: 3 KVLIVDDDELFRAMLTEMVQREGYQVSTATNGNEALAAIEHSRPDLVITDILMPEKDGIELIMELAQRESRIPIIAVSGGRRSISLEFNLESAKLMGVRATLPKPFTREDLRRAITEA 120
BLAST of mRNA_P-wetherbeei_contig20460.1.1 vs. uniprot
Match: A0A7C1I439_9BACE (Response regulator n=1 Tax=Bacteroides sp. TaxID=29523 RepID=A0A7C1I439_9BACE) HSP 1 Score: 105 bits (262), Expect = 6.920e-27 Identity = 51/116 (43.97%), Postives = 80/116 (68.97%), Query Frame = 1
Query: 1 KVLIVDDDESMRLMLLHKLNKLGYEVHLASNGFEALTLQKEHGVDLLLTDILMPDKDGLELISEFQNNYPNVKLIAMSGGSRISAQLYLKMATLMGPVGLLPKPFSMGDLELALAE 348
K+LI+DD+ + +ML L K GY+V LASNG E + L ++ L++TDI+MP+K+GLE I E + P++K+IAMSGG +ISA+ YL+ A++ G ++ KPF+ ++ A+ E
Sbjct: 4 KILIIDDEPYILMMLKKMLEKAGYDVDLASNGREGMELFQKEPACLVITDIIMPEKEGLETIREMKRLSPDLKIIAMSGGGKISAENYLETASIFGATKIIEKPFTQNEMVSAVKE 119
BLAST of mRNA_P-wetherbeei_contig20460.1.1 vs. uniprot
Match: UPI0004043300 (response regulator n=1 Tax=Desulfogranum mediterraneum TaxID=160661 RepID=UPI0004043300) HSP 1 Score: 105 bits (261), Expect = 1.010e-26 Identity = 49/110 (44.55%), Postives = 72/110 (65.45%), Query Frame = 1
Query: 1 KVLIVDDDESMRLMLLHKLNKLGYEVHLASNGFEALTLQKEHGVDLLLTDILMPDKDGLELISEFQNNYPNVKLIAMSGGSRISAQLYLKMATLMGPVGLLPKPFSMGDL 330
++L+VDD+E +R ML L + GYEVH A NG + ++ +H DL++TD++MP KDGL+ I E +YP +K++A+SGG I A+ YL MA +G + L KPF L
Sbjct: 3 RILVVDDEEQIRTMLTQMLEQEGYEVHTAENGEDGMSQVGQHFFDLVITDMIMPVKDGLKFIMELVRDYPELKILAISGGGAIKAERYLTMAGYLGDIATLEKPFKRESL 112 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20460.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20460.1.1 >prot_P-wetherbeei_contig20460.1.1 ID=prot_P-wetherbeei_contig20460.1.1|Name=mRNA_P-wetherbeei_contig20460.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=111bp MRLMLLHKLNKLGYEVHLASNGFEALTLQKEHGVDLLLTDILMPDKDGLEback to top mRNA from alignment at P-wetherbeei_contig20460:17..379- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20460.1.1 ID=mRNA_P-wetherbeei_contig20460.1.1|Name=mRNA_P-wetherbeei_contig20460.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=363bp|location=Sequence derived from alignment at P-wetherbeei_contig20460:17..379- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20460:17..379- >mRNA_P-wetherbeei_contig20460.1.1 ID=mRNA_P-wetherbeei_contig20460.1.1|Name=mRNA_P-wetherbeei_contig20460.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=333bp|location=Sequence derived from alignment at P-wetherbeei_contig20460:17..379- (Phaeothamnion wetherbeei SAG_119_79)back to top |