mRNA_P-wetherbeei_contig2046.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig2046.2.1
Unique NamemRNA_P-wetherbeei_contig2046.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig2046.2.1 vs. uniprot
Match: D7G567_ECTSI (Glyco_trans_2-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G567_ECTSI)

HSP 1 Score: 931 bits (2406), Expect = 0.000e+0
Identity = 465/727 (63.96%), Postives = 560/727 (77.03%), Query Frame = 2
Query:  404 VVQAVGQEVMSPLRITDKFNSSRG------------------GGA-YIRGEMLTPSPPANW--HPTPLFQSKSGGMHLGATGEVDRAPLDALAGAEGDPEAGATTKKDERNNHYINYLTVTITHLVIAYALGIQIYKIVMDALDSGVYITCIALAWYPAAYVFMLFSIDYLVAQIIYSLGPVAHMQQNSKYFSAVPCPRPDVLPKITIQMPVYKESLPETILPTIQSLTTAILHYKKVGGEANLLVCDDGLQLISQEERDARLYAYKKHGVSYVARPENSKRERKGLFKKASNMNYSLNVALRVEELCDREGA--SDPVAALELVKAEFAHEFLGAGDVRIGEVILLVDSDTRIPEDCLAKVSGEFALYGEVGFLQCKSTAIRINDNYWENMISHFTNDVYAVGIAMAVSSGDPAPLVGHNVFIRWAAIRDCSQVDPDDGERKFWSEKHVSEDFDLALRLQAHGFVGRYCTYTGNGFQEGVSLTAADEVIRLRKYAYGSCEIMLNKFVDWPCSGPVTSMFRRYLFASGVPGPAKIRMIAYLSTYVAMAFSFYGIVGYLAVWIEAPEVLKYLVNPFDILITVCFVFGALSVFGAAMITYRGGTGAKVGIFRAFLEQIKNAPIMLLFFSHVLFHLTVVCFRYFFSMSVQWTASVKESDHLDFFTEVKNTFKRYVGMYLTMLFFAGVVAAAIWYFQLSWDVRIFVAPAVYIGTHLFGPFLLNPIIMRGYY 2515
            VV  VG + +SP+ ++    +S G                  G A Y+R EMLTPSPP NW  H     + + G M      E  RA   A+   E D E G +   + R   YINY+TVT+TH++I   LG + Y IV D L  G Y+ C+A  +Y  AYVFMLFSIDYL+AQ IY+LGP+AHMQ+NSKYFS+ PCPRP V+P++TIQMPVYKE+L ETILP+IQS+ TA+LHYKK+GGEANL + DDGLQ+IS++ER+AR++AYK+HGVSYVARP  S R RKGLFKKASN+NY LNVA+RVEE+    G   +DPV AL+LV  EF  EF   GDVRIG+++LLVDSDTR+PEDCL+K SGEF  Y +VGF+QCK+T+IRI++N+WENMI+ FTNDVY+VGIAMAVSSGDPAPLVGHN F+RW+AIR+ S VD  DGERKFWSE HVSEDFDLALRLQA G++GRYCTYTG GFQEGVSLTAADEVIRLRKYAYGSCEIMLNKF  WPCSGP+TSMF RYL A GVP PAKIRMIAYL TY++MAF+FYGIVGYLAVWI  P  LK+LVNPFDILITVCFVFG  SVFG  MITYR G   +  + R+FL+Q+ NAPIMLLFFSHVL+HLTVVCFRYFF M+V+W+ASVKE    DF+TEV NTF+RY   +L M+  AG+    +WYF++ WD+R+++   +YIG+H+ GPFLLNP+IMRGYY
Sbjct:  119 VVHRVGMDCLSPINVSRAEGASSGVITPLHSGKSGLSCTTSIGPAQYMREEMLTPSPPPNWGQHFATTTEREPGEMEFKDEEERARA---AMTDREADLELGDSGWCEVRKTRYINYITVTLTHVLIFLVLGTRGYTIVRDTLSDGYYLRCVAFLYYLPAYVFMLFSIDYLLAQFIYALGPIAHMQENSKYFSSKPCPRPAVMPRVTIQMPVYKENLVETILPSIQSVMTAVLHYKKMGGEANLYINDDGLQVISEKERNARVFAYKRHGVSYVARPPASIRPRKGLFKKASNLNYGLNVAIRVEEIMAESGGQVTDPVEALQLVSGEFNDEFFAGGDVRIGDIVLLVDSDTRVPEDCLSKSSGEFERYPQVGFMQCKTTSIRIHNNFWENMIARFTNDVYSVGIAMAVSSGDPAPLVGHNAFLRWSAIREVSWVDSKDGERKFWSEAHVSEDFDLALRLQARGYIGRYCTYTGEGFQEGVSLTAADEVIRLRKYAYGSCEIMLNKFTKWPCSGPITSMFWRYLLAGGVPFPAKIRMIAYLCTYISMAFAFYGIVGYLAVWIVLPAALKFLVNPFDILITVCFVFGGCSVFGVGMITYRNGYSRRASLLRSFLDQLVNAPIMLLFFSHVLWHLTVVCFRYFFGMTVEWSASVKEVSQNDFWTEVVNTFRRYGRTFLMMMLLAGLFVGVMWYFEVGWDIRVYLPTFIYIGSHILGPFLLNPVIMRGYY 842          
BLAST of mRNA_P-wetherbeei_contig2046.2.1 vs. uniprot
Match: A0A6H5LE92_9PHAE (Glyco_trans_2-like domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LE92_9PHAE)

HSP 1 Score: 624 bits (1609), Expect = 1.100e-205
Identity = 320/658 (48.63%), Postives = 434/658 (65.96%), Query Frame = 2
Query:  545 FQSKSGGMHLGATGEVDRAPLDALAGAEGDPEAGATTKKDERNNHYINYLTVTITHLVIAYALGIQIYKIVMDALDSGVYITCIALAWYPAAYVFMLFSIDYLVAQIIYSLGPVAHMQQNSKYFSAVPCPRPDVLPKITIQMPVYKESLPETILPTIQSLTTAILHYKKVGGEANLLVCDDGLQLISQEERDARLYAYKKHGVSYVARPENSKRERKGLFKKASNMNYSLNVALRVEELCDREGASDPVAALELVKAEFAHEFLGAGDVRIGEVILLVDSDTRIPEDCLAKVSGEFALYGEVGFLQCKSTAIRINDNYWENMISHFTNDVYAVGIAMAVSSGDPAPLVGHNVFIRWAAIRDCSQVDPDDGERKFWSEKHVSEDFDLALRLQAHGFVGRYCTYTGNGFQEGVSLTAADEVIRLRKYAYGSCEIMLNKFVDWPCSGPVTSMFRRYLFASGVPGPAKIRMIAYLSTYVAMAFSFYGIVGYLAVWIEAPEVLKYLVNPFDILITVCFVFGALSVFGAAMITYRGGTGAKVGIFRAFLEQIKNAPIMLLFFSHVLFHLTVVCFRYFFSMSVQWTASVKESDHLDFFTEVKNTFKRYVGMYLTMLFFAGV-VAAAIWYFQLSWDVRIFVAPAVYIGTHLFGPFLLNPIIMRGYY 2515
            F S SG   +G++   D          E   +  +  K   R    INY T TI  + I     + ++K+V   LD G +   + + + PA  +FMLF + + + QI+ +LGPVAHMQ NS++FSA+   R    P ITIQMPVYKESL   ILP+I SL  A+ HY+K GG A + + DDGLQL+ +++R+AR+  Y+ H ++YVARP +  + RKGLFKKASNMNY L+V+ R   + + +G SDP  AL +V+     EFL  GD+ +G +ILLVDSDTR+PEDCL KV GEF     +GF+QC++T +R  DNYWE+MI+HFT ++Y +GIA++VS GDPAPLVGHN F+RW A++  S  +  DG  KFWSE HVSEDFD++LRLQ +GF+GRY TYTG GFQEGVSLT  DEVIRLRKYAYG+CE++LNKF  WPC GP+TS+F  YL A G+P P+K++M  YL TY+AMA+S  GI  Y+ + +    + + + N +D+ ITV FVFG + +FGA  I YR G    V IF+A+  +++NAP M +F+SH+L+H+T  C+ YF+ + + W A+ KES    F+ E K T  RY GMY+ +    GV V   IW  Q   D R+    + Y+ TH  GPFLLNP++ RGYY
Sbjct:  164 FNSSSGMYSMGSSEAFD---------VEDANQRISAPKGPVRVTRRINYFTQTIVLVFILSTSALFVWKMVGLCLDDGYWGRMVNVGFLPAVVIFMLFIVHFGITQIVCALGPVAHMQTNSQFFSALAPARALTYPDITIQMPVYKESLEAVILPSIVSLEAAMSHYRKAGGFAKIFINDDGLQLLDEKDREARVSVYRAHRIAYVARPPHGVKIRKGLFKKASNMNYCLDVSDRTMGVMEEQGLSDPALALSMVQEAAQGEFLAGGDLTMGSIILLVDSDTRVPEDCLTKVVGEFQECPNLGFVQCRTTPLRAEDNYWEDMIAHFTENIYDIGIALSVSGGDPAPLVGHNAFLRWNAMKAVSWKE--DGMTKFWSEAHVSEDFDMSLRLQTNGFIGRYATYTGPGFQEGVSLTCVDEVIRLRKYAYGACEMLLNKFKHWPCRGPITSLFWSYLGARGIPWPSKLQMAGYLGTYLAMAYSVVGICSYIVLRMFYGVLQEDITNTYDVFITVVFVFGVIGIFGAGTIRYRMGFAGDVTIFQAYWIELRNAPAMTMFWSHILWHITTACWCYFWDLDIVWGATAKESTRSTFWVEFKETLARYRGMYICLTLLFGVYVFGMIWTGQEWTDQRLSFPLSFYVATHFLGPFLLNPVLTRGYY 810          
BLAST of mRNA_P-wetherbeei_contig2046.2.1 vs. uniprot
Match: A0A7S0PX07_9STRA (Hypothetical protein n=1 Tax=Asterionellopsis glacialis TaxID=33640 RepID=A0A7S0PX07_9STRA)

HSP 1 Score: 407 bits (1046), Expect = 2.120e-122
Identity = 230/573 (40.14%), Postives = 342/573 (59.69%), Query Frame = 2
Query:  830 MLFSIDYLVAQIIYSLGPVAHMQQNSKYFSAVPCPRPDVLPKITIQMPVYKESLPETILPTIQSLTTAILHYKKVGGEANLLVCDDGLQLISQEERDARLYAYKKHGVSYVARPENSKRERKGLFKKASNMNYSLNVALRVEELCDREGASDPVAALELVKAEFAHEFLGAGDVRIG--EVILLVDSDTRIPEDCLAKVSGEFALYGEVGFLQCKSTAIRINDNYWENMISHFTNDVYAVGIAMAVSSGDPAPLVGHNVFIRWAAIRDCSQVDPDDGERKFWSEKHVSEDFDLALRLQAHGFVGRYCTYTGNGFQEGVSLTAADEVIRLRKYAYGSCEIMLNKFVDWPCSGPVTSMFRRYLFASGVPGPAKIRMIAYLSTYVAMAFS--FYGIVGYLAVWIEAPEVLKYLVNPFDILITVCFVFGALSVFGAAMITYRGGTGAKVGIFRAFLEQIKNAPIMLLFFSHVLFHLTVVCFRYFFSMSVQWTASVKESDHLD-----FFTEVKNTFKRYVGMYLTMLFFAGVVAAAIWYFQ-----LSWDVRIFVAPAVYIGTHLFGPFLLNPIIMR 2506
            M+F    +   I+   G   ++Q+NSKY SA P P P  LP + +QMPVYKES  ETILP++ S+  AI +Y  +GG+A++ V DDGLQLI ++ER+ R+  Y ++ ++Y+ARP +   +R GLFKKASNMN+ LN A+ V++  +  G S   A   ++ A   +  L  G + IG  E +LLVDSDTR+PE CL +  GEF +   +GF+Q   + +R+ +NYWE M++H+T  +Y + I M  ++G+PAPLVGHN  + W  +++ S  D +   RKFWSE HVSEDFDL+LRLQ+ G++GRY  Y G GFQEGVSLT  DE+I+L+K+AYG+ E+M NKF  W   GP   +   YL    +P  A++ M+AY  T+ AMA+   F  +  +L+      +V+      ++  I V   F  +   G  ++ +  G      ++ AF+++I  AP++ +F++ V +H+    FRY F M  +W A+VKE D  D     F+TEVKNT K Y  MYL  +   G ++  IW++      + ++  +      +IG H   P LLNP  MR
Sbjct:    1 MMFPFKLVFFNILSIFGSWRNIQKNSKYHSAFPPPVPAELPPVCVQMPVYKESFDETILPSLISIYRAIDYYTAMGGDAHMFVNDDGLQLIDEKEREERIRFYHENEIAYIARPSHDILKRHGLFKKASNMNFCLNFAIDVQKAEEEFGLSKQEAIQHVIDAR-PYPVLAGGPIGIGTVEYVLLVDSDTRVPEKCLYQTVGEFVITPTLGFIQHTMSVLRVGNNYWEEMLAHWTWTLYNLFIPMGTANGEPAPLVGHNATLNWRLVKEVSTFDEEVNYRKFWSESHVSEDFDLSLRLQSKGYIGRYAMYCGMGFQEGVSLTVFDEIIKLKKFAYGAGEMMFNKFRYWCWKGPFAPLIIDYLRTKEIPLAARVNMVAYFFTFFAMAWGVLFLPLSFFLSTITPYEQVMA---TAWENYIGVMLSFLVVGTAGTIVLKFLMGIYGS--LWAAFIDEIWRAPLIAVFYAGVQWHMFTGFFRYMFDMKAEWGATVKELDDTDISFKTFYTEVKNTVKAYWFMYLFPVL--GQMSFFIWFYMFGPEHIKYNGYVLAPFFSFIGAHFLMPILLNPNAMR 565          
BLAST of mRNA_P-wetherbeei_contig2046.2.1 vs. uniprot
Match: G4TGE2_SERID (Glyco_trans_2-like domain-containing protein n=1 Tax=Serendipita indica (strain DSM 11827) TaxID=1109443 RepID=G4TGE2_SERID)

HSP 1 Score: 390 bits (1001), Expect = 2.930e-115
Identity = 244/632 (38.61%), Postives = 353/632 (55.85%), Query Frame = 2
Query:  812 PAAYVFMLFSIDYLVAQIIYSLGPVAHMQQNSKYFSAV-PCPRPDV---LPKITIQMPVYKESLPETILPTIQSLTTAILHYKKVGGEANLLVCDDGLQLISQEERDARLYAYKKHGVSYVARPENSKR----ERKGLFKKASNMNYSLNVALRVEELCDREGASDPVA-------------------------------------------------ALELVKAEFAHEFL--GAGD--VRIGEVILLVDSDTRIPEDCLAKVSGEFALYGEVGFLQCKSTAIRINDNYWENMISHFTNDVYAVGIAMAVSSGDPAPLVGHNVFIRWAAIRDCSQVDPDDGERKFWSEKHVSEDFDLALRLQAHGFVGRYCTYTGNGFQEGVSLTAADEVIRLRKYAYGSCEIMLNKFVDWPCSGPVTSMFRRYLFASGVPGPAKIRMIAYLSTYVAMAFSFY-GIVGYLAVWIEAPEVLKYLVNPFDILITVCFVFGALSVFGAAMITYRGGTGAKVGIFRAFLEQIKNAPIMLLFFSHVLFHLTVVCFRYFFSMSVQWTASVKESDHLDFFTEVKNTFKRY-VGMYLTMLFFAGVVAAAIWYFQLSWDV-----RIFVAPAVYIGTHLFGPFLLNPIIM 2503
            P  +   LF  ++++  +  S+GPVA   QNSKY+SA+ P P PDV   LP ITIQMPVYKESL ETI P+ +SL  A+  Y + GG +++++CDDG+QL+     + R   Y  HG+ +VARP +S      +R G FKKASNMNY+LN++L++EE   R   SDP A                                                 A++ V AE  + F   GAG   +R+GE+IL+VDSDT +PEDCL   + E A   E+G +Q +S  ++++ +Y+EN I+HFT  V    I+ A ++G+ A  VGHN F+RW+AI+D S +DP DGERK WSE +VSEDFD+ALRLQ  G++ R+ +Y+  GF+EGVSLT  DE+ R  KY+YG  E++ N FV W   GP+    R +++ S  P   KI M+AY+ +Y  +A SF   ++ YLAV    P    YL   F+I ++V FVF         ++ YR G   + G+  AF+E +   P  ++FF  +  HL+     + FS ++ W A+ KE +  +FF EV     R+ V + L +L   G++A  +  F L W +      +    A+ I +HL  P LLNP +M
Sbjct:  291 PFLFCVSLFFYNFVIILVAQSIGPVAQYHQNSKYYSAIKPAPNPDVDRHLPHITIQMPVYKESLTETIAPSCESLKKAMQTYARQGGTSSIMICDDGMQLLDPALAEERKRYYADHGIGWVARPAHSGASDGFKRAGRFKKASNMNYALNISLKMEEHLGRF-MSDPKALENARMARRLSKAATGDRLYGEGLSTQGWWHLDLDEEIEESLEDLALRAAMDEVYAESGNRFQPWGAGGRALRVGEIILIVDSDTIVPEDCLRDAAREMAECPELGVIQHESDVMQVSRDYFENGIAHFTRRVNKA-ISFAAANGEVAAFVGHNAFLRWSAIQDVSFIDPVDGERKIWSESNVSEDFDMALRLQLGGYIVRWASYSDGGFKEGVSLTCDDELNRWEKYSYGCSELIFNPFVQWFTKGPINKQLRTFVW-SNAPVHYKISMMAYMFSYYGLAASFVLSLINYLAVGWALPLDGMYL-QSFEIWVSVIFVFPLCGNIAHTLLEYRLG---QKGLIAAFIENVLWMPFFVIFFGGLSIHLSKAILAHLFSYNITWGATKKEVERSNFFLEVPKILVRFRVALILCVLTIGGMIALTVPIFPLDWRIPYSNWSVVTPLAISIVSHLAYPILLNPYLM 915          
BLAST of mRNA_P-wetherbeei_contig2046.2.1 vs. uniprot
Match: G2QML7_MYCTT (Glyco_trans_2-like domain-containing protein n=2 Tax=Chaetomiaceae TaxID=35718 RepID=G2QML7_MYCTT)

HSP 1 Score: 388 bits (997), Expect = 5.070e-115
Identity = 242/668 (36.23%), Postives = 373/668 (55.84%), Query Frame = 2
Query:  572 LGATGEVDRAPLDALAGAEGDPEAGATTKKDERNNHYINYLTVTITHLVIAYALGIQIYKIVMDALDSGVYITCIALAWYPAAYVFMLFSIDYLVAQIIYSLGPVAHMQQNSKYFSAVPCPR--PDVLPKITIQMPVYKESLPETILPTIQSLTTAILHYKKVGGEANLLVCDDGLQLISQEERDARLYAYKKHGVSYVARPENSKR--ERKGLFKKASNMNYSLNVALRVEELCDREGAS------DPVAALELVKAEFAHEFLGA---GDVRIGEVILLVDSDTRIPEDCLAKVSGEFALYGEVGFLQCKSTAIRINDNYWENMISHFTNDVYAVGIAMAVSSGDPAPLVGHNVFIRWAAIRDCSQVDPDDGERKFWSEKHVSEDFDLALRLQAHGFVGRYCTYTGNGFQEGVSLTAADEVIRLRKYAYGSCEIMLNKFVDWPCSGPVTSMFRRYLFASGVPGPAKIRMIAYLSTYVAMAFSF------YGIVGYLAVWIEAPEVLKYLVNPFDILITVCFVFGALSVFGAAMITYRGGTGAKVGIFRAFLEQIKNAPIMLLFFSHVLFHLTVVCFRYFFSMSVQWTASVKESDHLDFFTEVKNTFKRY-VGMYLTMLFFAGVVAAAIWYF-QLSWDVRIFVA---PAVYIGTHLFGPFLLNPIIM 2503
            +GA    D   + A+   E D E+G   K ++R  H +N   V+++ +++  +LG    ++ ++    G Y+    +A +P    F LF    +V  +    GP+  +  NSK++SA P PR    VLP +T+Q PVYKE L   I PT++S+  A+  Y+  GG AN+ + DDGLQLIS+E+R AR+  Y  + + +VARP++ +   +R+G FKKASNMN++L ++ +VE+       +      D   A E    E   E   A   G++RIG+ ILLVDSDTR+P DCL     E  L  +VG +Q  S  +++   Y+EN I+ FTN +Y+  I   VS+GD AP VGHN  +RW+AI+  S  D +DG  KFWSE HVSEDFD++LRLQ  G++ R   + G+GF+EGVSLT  DE+ R  KYAYG  E++ +    W   GP T +FRR+LF S +   +K+ +I+Y+ TY A+A ++      Y I+G+   +++     KY V+ + +  ++  VF  L     A++ YR G   +  I  A  E  K   ++ +F   +  HL+     + F + + W A+ KE++  +FF EV    K++ + M    +F AG++  A+  F   SW ++ FVA    A    +HL  P +LNP +M
Sbjct:  227 VGAEDNEDEKGVAAVEEPEVDEESGEL-KPEKRPVHLLNAYLVSLSLILVTVSLGAAFRQLAIEVSVDGNYVRLALVALFPVQMFFTLFFAQVIVGCLAQIFGPIRQLTVNSKFYSARPPPRLRSSVLPHVTVQCPVYKEGLNAVIAPTVKSIKQAMSTYELQGGSANMFINDDGLQLISEEDRRARIEFYADNSIGWVARPKHGENGFQRRGKFKKASNMNFALMISCKVEDKLAAIQRTPDWTQHDEALAYERALKEVLEEDGRAWADGNIRIGDYILLVDSDTRVPADCLLDAVSEMELSPDVGIMQFSSGVMQVVHTYFENGITFFTNLIYSA-IRYTVSNGDVAPFVGHNAILRWSAIQQVSYED-EDGYEKFWSESHVSEDFDMSLRLQCAGYIIRLAAWAGDGFKEGVSLTVYDELARWEKYAYGCNELLFHPIRKWIYKGPFTPLFRRFLF-SNIRFTSKVTVISYIGTYYAIAAAWIMTSINYFIMGWFNGYLD-----KYYVDSWQVWFSIILVFNGLGNIALAVMRYRVG---ERSILYALYENFKWTFLLAVFLGGLSLHLSQALLAHMFEIDMTWGATAKEAEFSNFFIEVPKVLKKFKISMLFATIFIAGMIILAVAPFIPYSWHIKDFVAILPMATVAASHLLLPLVLNPALM 882          
BLAST of mRNA_P-wetherbeei_contig2046.2.1 vs. uniprot
Match: A0A1Y2FNJ2_PROLT (Glycosyl transferase family group 2-domain-containing protein (Fragment) n=1 Tax=Protomyces lactucae-debilis TaxID=2754530 RepID=A0A1Y2FNJ2_PROLT)

HSP 1 Score: 385 bits (989), Expect = 7.480e-115
Identity = 236/625 (37.76%), Postives = 354/625 (56.64%), Query Frame = 2
Query:  662 DERNNHYINYLTVTITHLVIAYALGIQIYKIVMDALDSGVYITCIALAWYPAAYVFMLFSIDYLVAQIIYSLGPVAHMQQNSKYFSAVPCPR-PDVLPKITIQMPVYKESLPETILPTIQSLTTAILHYKKVGGEANLLVCDDGLQLISQEERDARLYAYKKHGVSYVARPENSKRE--RKGLFKKASNMNYSLNVALRVEELCDREGASDPVA------ALELVKAE-FAHEFLGAGDVRIGEVILLVDSDTRIPEDCLAKVSGEFALYGEVGFLQCKSTAIRINDNYWENMISHFTNDVYAVGIAMAVSSGDPAPLVGHNVFIRWAAIRDCSQVDPDDGERKFWSEKHVSEDFDLALRLQAHGFVGRYCTYTGNGFQEGVSLTAADEVIRLRKYAYGSCEIMLNKFVDWPCSGPVTSMFRRYLFASGVPGPAKIRMIAYLSTYVAMAFSF-YGIVGYLAVWIEAPEVLKYLVNPFDILITVCFVFGALSVFGAAMITYRGGTGAKVGIFRAFLEQIKNAPIMLLFFSHVLFHLTVVCFRYFFSMSVQWTASVKESDHLDFFTEVKNTFKRYVGMYLTMLFFAGVVAAAIWYFQLSWDVRIFVAP---AVYIGTHLFGPFLLNP 2494
            DER N  I    +    +++A+ + + I K+V++    G       LA+ P  Y++  F    L   +    GP++ M  NS+++SA+P  R  + LP ITIQ PVYKESL + I+PT+ SL  A+  Y+  GG A L   DDG+QL+ +EER+AR   Y  + +++VARP + K    R G FKKASNMNY LN+++ VE+  D +  S  V       A+ L K+E F     GAGD+RIGE+ILL+DSDTR+P DCL   + EFAL   +G LQ  S  +++  ++WEN I+HFTN +Y   I  A +SGD +P VGHN F+RWAAI++ +  +   G +++WSE+HVSEDF+++L++Q  G++ R   Y+   F+EGVSLT  DE+ R +KYAYG  E++ N F DW   GP+T +FR +L  S +   AK  M+AY++TY A+A      I+ Y  +   +  V ++ V  FD+ + +  VF  +  F  A + +R     +   F+A LE  K   +M +F   +  HLT     + FS++V W A+ K  ++  F  E+   +K++  MYL +     ++ A  +     W +   V     A  I TH   P  LNP
Sbjct:  176 DERPNLVIVSALIAGAIILLAWFVAVNIKKLVIEIRVDGNMTRLALLAYVPFTYLWTSFFAIVLTGFLFQVFGPISQMSSNSRFYSALPPKRLTENLPDITIQCPVYKESLDQVIMPTVASLKMAVATYESQGGRAFLFFNDDGMQLLDEEEREARQKFYLANDIAWVARPAHGKDGFVRAGRFKKASNMNYCLNLSMLVEDEMDAQEDSGRVLDAEAALAVALEKSESFGPRAEGAGDIRIGELILLIDSDTRVPTDCLIDAASEFALSPSLGILQHASGVMQVTHDFWENGITHFTNGIY-FAIRYACASGDASPFVGHNAFLRWAAIQEIAH-ETKQGLQQWWSEEHVSEDFEMSLKIQMKGYIVRLAAYSNGEFKEGVSLTVYDELARWQKYAYGCSELVFNPFKDWFRKGPITPIFRLFL-RSNMKSFAKFTMMAYIATYYAIAVGAGLTIINYFVMGWFSSTVDQFYVQSFDLFVPIIIVFNVVWPFVNAFLRFRV---KEASFFKALLENYKWGMMMSVFMGGLSIHLTTALLSHLFSINVNWGATSKTLENSSFSREIPKIWKQFRWMYLFLFILVAMMIAIAFGVPEDWKITGLVPTICLAWLIVTHALLPVALNP 794          
BLAST of mRNA_P-wetherbeei_contig2046.2.1 vs. uniprot
Match: A0A194URL9_9PEZI (Glucans biosynthesis glucosyltransferase H n=2 Tax=Valsa mali TaxID=105487 RepID=A0A194URL9_9PEZI)

HSP 1 Score: 385 bits (989), Expect = 3.620e-114
Identity = 242/649 (37.29%), Postives = 358/649 (55.16%), Query Frame = 2
Query:  632 DPEAGATTKKDERNNHYINYLTVTITHLVIAYALGIQIYKIVMDALDSGVYITCIALAWYPAAYVFMLFSIDYLVAQIIYSLGPVAHMQQNSKYFSAVPCPR--PDVLPKITIQMPVYKESLPETILPTIQSLTTAILHYKKVGGEANLLVCDDGLQLISQEERDARLYAYKKHGVSYVARPENSKR--ERKGLFKKASNMNYSLNVALRVEELCD--REG------ASDPV--AALELVKAEFAHEFLGAGDVRIGEVILLVDSDTRIPEDCLAKVSGEFALYGEVGFLQCKSTAIRINDNYWENMISHFTNDVYAVGIAMAVSSGDPAPLVGHNVFIRWAAIRDCSQVDPDDGERKFWSEKHVSEDFDLALRLQAHGFVGRYCTYTGNGFQEGVSLTAADEVIRLRKYAYGSCEIMLNKFVDWPCSGPVTSMFRRYLFASGVPGPAKIRMIAYLSTYVAMAFSF------YGIVGYLAVWIEAPEVLKYLVNPFDILITVCFVFGALSVFGAAMITYRGGTGAKVGIFRAFLEQIKNAPIMLLFFSHVLFHLTVVCFRYFFSMSVQWTASVKESDHLDFFTEVKNTFKRY-VGMYLTMLFFA-GVVAAAIWYFQLSWDVRIFVA---PAVYIGTHLFGPFLLNPIIM 2503
            D E G   K ++R  H  N + V++T   I  +LG    +I ++       +    ++ +P    F LF    +   +    GP+  ++ NSKYFSA   PR     LP +TIQ PVYKE L   I PTI+SL TAI  Y+  GG ANL V DDGLQL+ +E+R+AR+  Y ++G+ +VARP +     +R+G FKKASNMNY+L ++ RVEE     R G      A   V   AL+ V  E        G++RIG+ ILLVDSDTR+PEDCL     E     EVG LQ  S  +++ D Y+EN I+ FTN +Y+  I   V++GD AP VGHN  +RW+AI+  S  D +DG  KFWSE HVSEDFD++LRLQ  G++ R   + G GF+EGVSLT  DE+ R  KYAYG  E++ +    W   GP T +FR++L  SG+P  +K+ +I+Y+ TY A+  ++      Y + G+ + +++     +Y V+ + +  ++  VF  L   G AM+ YR G   +   F+A +E  K   ++ +F   +  HL+     + F +++ W A+ KE++  +FF E     K++   M  ++ F A  ++     +    W +  FVA    A    +H+  P  LNP +M
Sbjct:  218 DEETGKI-KPEKRPLHLQNSVLVSVTLSAITLSLGAAFRQIAVETQTDSTLLRVALVSLFPIQVFFTLFFCQVIWGSLAQCCGPIRQLETNSKYFSAKKSPRLQSSTLPHVTIQCPVYKEGLAGVIAPTIKSLKTAITTYELQGGSANLFVNDDGLQLLPEEDREARIDFYSENGIGWVARPRHGDNGFQRRGRFKKASNMNYALMISCRVEEKLAPARRGPGWGQHAESEVYSKALQEVSDEMKGRAWMDGNIRIGDYILLVDSDTRVPEDCLLDAVSEMEQSPEVGILQFSSGVMQVVDTYFENGITFFTNLIYSA-IRYTVANGDVAPFVGHNAMLRWSAIQSVS-YDDEDGYDKFWSESHVSEDFDMSLRLQCAGYIIRLAAWAGEGFKEGVSLTVYDELARWEKYAYGCNELLFHPVHRWITRGPFTPLFRKFL-RSGIPVTSKVTVISYIGTYYAIGAAWIMTSVNYFLYGWFSDYLD-----RYYVDSWQVWFSIIIVFNGLGNIGLAMMRYRNG---EKNFFKALVENFKWMVLLAIFLGGLSLHLSQALLSHMFDINMTWGATSKEAEFSNFFIEAPKVMKKFRYSMVFSLSFIAIMIILGCAPFIPYDWRITDFVAILPMATVAMSHMLLPIALNPALM 854          
BLAST of mRNA_P-wetherbeei_contig2046.2.1 vs. uniprot
Match: G0S0Q5_CHATD (Glyco_trans_2-like domain-containing protein n=1 Tax=Chaetomium thermophilum (strain DSM 1495 / CBS 144.50 / IMI 039719) TaxID=759272 RepID=G0S0Q5_CHATD)

HSP 1 Score: 385 bits (990), Expect = 4.090e-114
Identity = 242/659 (36.72%), Postives = 365/659 (55.39%), Query Frame = 2
Query:  608 DALAGAEGDPEAGATT---KKDERNNHYINYLTVTITHLVIAYALGIQIYKIVMDALDSGVYITCIALAWYPAAYVFMLFSIDYLVAQIIYSLGPVAHMQQNSKYFSAVPCPR--PDVLPKITIQMPVYKESLPETILPTIQSLTTAILHYKKVGGEANLLVCDDGLQLISQEERDARLYAYKKHGVSYVARPENSKR--ERKGLFKKASNMNYSLNVALRVEE-LCDREGAS-----DPVAALELVKAEFAHEFLGA---GDVRIGEVILLVDSDTRIPEDCLAKVSGEFALYGEVGFLQCKSTAIRINDNYWENMISHFTNDVYAVGIAMAVSSGDPAPLVGHNVFIRWAAIRDCSQVDPDDGERKFWSEKHVSEDFDLALRLQAHGFVGRYCTYTGNGFQEGVSLTAADEVIRLRKYAYGSCEIMLNKFVDWPCSGPVTSMFRRYLFASGVPGPAKIRMIAYLSTYVAMAFSF------YGIVGYLAVWIEAPEVLKYLVNPFDILITVCFVFGALSVFGAAMITYRGGTGAKVGIFRAFLEQIKNAPIMLLFFSHVLFHLTVVCFRYFFSMSVQWTASVKESDHLDFFTEVKNTFKRY-VGMYLTMLFFAG-VVAAAIWYFQLSWDVRIFVA---PAVYIGTHLFGPFLLNPIIM 2503
            D  A   G+PE    +   K ++R  H +N   VT+T +++  ++G    ++ ++    G Y+    LA  P    F LF    +V  +    GP+  +  NSK++SA P PR    VLP +TIQ PVYKE L   I PT++S+  A+  Y+  GG ANL + DDGLQLIS+EER AR+  Y  H + +VARP++ +   +R+G FKKASNMN++L ++ +VE+ L   E        D   A E    E   E   A   G++RIG+ ILL+DSDTR+P DCL     E  L  +VG +Q  S  +++   Y+EN I+ FTN +Y+  I   VS+GD AP VGHN  +RW+AI+  S VD +DG  KFWSE HVSEDFD++LRLQ +G++ R   + G+GF+EGVSLT  DE+ R  KYAYG  E++ +    W   GP T +FRR+LF S +   +K+ +I+Y+ TY A+  ++      Y ++G+   +++     KY ++ + +  ++  VF  L     A++ YR G   +  I  A  E  K   ++ +F   +  H++     + F + +QW A+ KE +  +FF EV    +++   M  +M F  G ++ A   +   SW +  FVA    A    +HL  P  LNP +M
Sbjct:  226 DEKATGRGEPEIDEESGEIKPEKRPVHLMNTYLVTLTLILVTVSIGAAGRQLAIEVSVDGNYVRLALLALAPVQIFFTLFFCQVIVGCLAQIFGPIRQLTINSKFYSAKPPPRLRSAVLPHVTIQCPVYKEGLQTVIAPTVKSIKQAMSTYELQGGSANLFINDDGLQLISEEERRARIEFYADHSIGWVARPKDGENGFKRRGKFKKASNMNFALMISCKVEDKLAQIERGPEWTQHDEAQAYEKALKEVLEEDGRAWADGNIRIGDYILLIDSDTRVPADCLLDAVSEMELSPDVGIMQFSSGVMQVVHTYFENGITFFTNLIYSA-IRYTVSNGDVAPFVGHNAILRWSAIQQVSYVD-EDGYEKFWSESHVSEDFDMSLRLQCNGYIIRLAAWAGDGFKEGVSLTVYDELARWEKYAYGCNELLFHPIRTWLWKGPFTPLFRRFLF-SNIRFTSKVTVISYIGTYYAIGAAWIMTSVNYFLMGWFNGYLD-----KYYLDSWQVWFSIILVFNGLGNIALAVMRYRVG---ERSILYALYENFKWTIMLAIFLGGLSLHISQALLAHMFEIDMQWGATAKEVEFSNFFIEVPKVLRKFKFSMLFSMAFIVGMIILATAPFIPYSWHITDFVAILPMATVAASHLLLPIALNPALM 873          
BLAST of mRNA_P-wetherbeei_contig2046.2.1 vs. uniprot
Match: A0A8J9WQ03_9CHLO (Probable cellulase/esterase CelE at C-terminar half n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WQ03_9CHLO)

HSP 1 Score: 398 bits (1022), Expect = 5.400e-114
Identity = 246/627 (39.23%), Postives = 352/627 (56.14%), Query Frame = 2
Query:  698 VTITHLVIAYALGIQIYKIVMDALDSGVYITCIA-LAWYPAAYVFMLFSIDYLVAQIIYSLGPVAHMQQNSKYFSAV-PCPRPDVLPKITIQMPVYKESLPETILPTIQSLTTAILHYKKVGGEANLLVCDDGLQLISQEERDARLYAYKKHGVSYVARPENSKR--ERKGLFKKASNMNYSLNVALRVEELCDREGASDPVAALELVK-----AEFAHEFLGAGDVRIGEVILLVDSDTRIPEDCLAKVSGEFALYGEVGFLQCKSTAIRINDNYWENMISHFTNDVYAVGIAMAVSSGDPAPLVGHNVFIRWAAIRDCSQVDPDDGERKFWSEKHVSEDFDLALRLQAHGFVGRYCTYTGNGFQEGVSLTAADEVIRLRKYAYGSCEIMLNKFVDWPCSGPVTSMFRRYLFASGVPGPAKIRMIAYLSTYVAMAFSFYGIVGYLAVWIEAPEVLKYLVNP------------FDILITVCFVFGALSVFGAAMITYRGGTGAKVGIFRAFLEQIKNAPIMLLFFSHVLFHLTVVCFRYFFSMSVQWTASVKESDHLDFFTEVKNTFKRYVGMY-------LTMLFFAGVVAAAIWYFQLSWDVR--IFVAPAVY-IGTHLFGPFL 2485
            V I   +I   LG  +   + DA++ G +    A +A+ P   V  +F +  +V  II +LGP+AH++QNS+ +SAV P      LP++T+QMPVY E     I P+I S   AI  Y+  GG A++ V DDGLQL++ E+R+ R+  Y+ H + YVARP + +   ER+G FKKASNMNY L V+ +VE +    G  D   AL+ V+     A   H FL  GDVR+GE ILLVDSDTR+P+DC+  V  E  +   V F Q  +T +++  +Y+EN ++ FTN +Y   I ++VS GD +PLVGHN F+RW+AI++C+ VDPDDG+ KFWS+ HVSEDFD+A+R Q  GF+GRY TYTG  F+EG+SLT  DE+ R RKYA+G  E++ N    W   GP++ +FRRYL     P   K+ ++AY+  Y+A+A +          W  A   L Y +N             F+I +T   VF  L+  G   + YR G      I RA    IK   +   FF+ + FHL+     +     + W ++ KE    +FF E++ TF  Y  MY       L M+   GV+   +     +W +R  I + P  + IG HL  P +
Sbjct:  565 VIIACCIIMGVLGSGVGYAIRDAVEDGSWWKVAARVAFTPVISVLAMFGVIAIVCCIIVTLGPIAHVEQNSRTYSAVKPLRWRGKLPRVTVQMPVYLEGFEFVIKPSIFSYEAAIAAYRAEGGSASIFVNDDGLQLLNDEDREERIEFYRAHDIGYVARPPHGRAGFERRGRFKKASNMNYCLEVSRQVENIMAETGV-DQYEALQAVRLATQAATPEHAFLAGGDVRMGEFILLVDSDTRVPQDCMLPVVTELMMSPNVAFTQHFTTPLQVAHDYFENAMAFFTNTIYNA-IMVSVSGGDISPLVGHNAFLRWSAIKECAFVDPDDGKTKFWSDVHVSEDFDIAMRFQVKGFIGRYITYTGPEFKEGLSLTVHDEITRWRKYAFGCSELVFNPLKQWWYRGPLSPLFRRYLCNKCTPVTNKLTIVAYICIYIALAIA----------WPVAC--LTYFLNSKCEWYATAFEGTFEISMTCLVVFSILTPIGNTFLLYRLGVTT---IPRAAWLNIKYVVVFFFFFNGLSFHLSAAFASHLLGFRMSWGSTSKEVVDTNFFKEMRATFTNYRSMYIVFTCLALMMVVMTGVIPHTV---PPAWQIRDAILMTPLAFLIGGHLLAPLV 1171          
BLAST of mRNA_P-wetherbeei_contig2046.2.1 vs. uniprot
Match: A0A383VWK9_TETOB (Glyco_trans_2-like domain-containing protein n=2 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VWK9_TETOB)

HSP 1 Score: 380 bits (975), Expect = 1.530e-113
Identity = 245/697 (35.15%), Postives = 364/697 (52.22%), Query Frame = 2
Query:  467 SRGGGAYIRGEMLTPSPPANWHPTPLFQSKSGGMHLGATGEVDRAPLDALAGAEGDPEAGATTKKDERNNHYINYLTVTITHLV---IAYALGIQIYKIVMDALDSGVYITCIALAWYPAAYVFMLFSIDYLVAQII-YSLGPVAHMQQNSKYFSAV--PCPRPDVLPKITIQMPVYKESLPETILPTIQSLTTAILHYKKVGGEANLLVCDDGLQLISQEERDARLYAYKKHGVSYVARPENSKRERKGLFKKASNMNYSLNVALRVEELCDREGASDPVAALELVKAEFAHEFLGAGDVRIGE--VILLVDSDTRIPEDCLAKVSGEFALYGEVGFLQCKSTAI-RINDNYWENMISHFTNDVYAVGIAMAVSSGDPAPLVGHNVFIRWAAIRDCSQVDPD--DGERKFWSEKHVSEDFDLALRLQAHGFVGRYCTYTGNGFQEGVSLTAADEVIRLRKYAYGSCEIMLNKFVDWPCSGPVTSMFRRYLFASGVPGPAKIRMIAYLSTYVAMAFSFYGIV--GYLAVWIEAPEVLKYLVNPFDILITVCFVFGALSVF-GAAMITYRGGTGAKV-GIFRAFLEQIKNAPIMLLFFSHVLFHLTVVCFRYFFSMSVQWTASVKESDHLDFFTEVKNTFKRYVGMYLTMLFFAGVVAAAIWYFQLS----WDVRIFVAPAVYIGTHLFGPFLLNPII 2500
            SR GG+       +P+  +   P P+ +  S    L   GE+ +  +  +A     P A     + E       +  + I  +V   +A  L +  Y  +   L    +   + L   P    F  F+++  V  +    LG  + + QN++ +S++  P PR   LP+I +QMPVYKESL ETI  +  ++  A+ +Y   GG    +VCDDG Q+IS +E  AR   Y KHG++YVARP  ++R   G FKKASN+NY L ++  V  L  ++      AALE V  ++  EF+  GD+ + +  +ILL+D+DT++PE C+    GEF    EV + Q  +T     N NYWE  +S+FT  +Y  GIA++ + GD +PLVGHN F+RW+A+R     D     GE K W E  VSEDFD+ +RL + G  GRY  YTG+ FQEG+SLT  DEV++ +K+AYG+CE++ N F +W   GP+   FR Y+    +    K  M+AYLS+Y+AMA +FY  V  G ++V ++A     +++  FD+++T   +F  +  F G     +R     +   IF+   + IK  P   LFF+ VLF +T VCF YFF M   W A+ KE  +   +  +  T   Y   YL      G  +  +W F L     W +  F         H+ GP LLNP I
Sbjct:   43 SRSGGSSXX--XXSPARNSLRQPDPMRRVDSSSSLLHYFGEIKKLDMSVVASEIEGPTAAKPEPEPEVPPRITVHTKMHINAMVCAGLAAVLIMSYYGSITTILRYKRWYAVVVLLLVPVGAYFFSFAVNTAVCGVFSVFLGGTSPLVQNTQNYSSIKTPIPRGAKLPQIIVQMPVYKESLEETIQLSYHNVKRAMDYYTSKGGRVKFIVCDDGFQVISPDEAVARSNFYTKHGIAYVARPAANRR---GTFKKASNLNYQLAISQLVASLMKQQPGLTAEAALEAVWEQWGREFVAQGDLTMDDDCLILLIDADTKVPEACMYNTVGEFLQCPEVAYTQHYTTPFTEQNRNYWEGYVSNFTRTIYFQGIAVSTAFGDTSPLVGHNAFLRWSALRAIGYTDETCRPGEVKVWGEDSVSEDFDMYIRLASVGSFGRYVMYTGDEFQEGISLTYMDEVVKFKKFAYGACELLFNPFREWISKGPINKKFRLYMANKNIRWYQKSSMLAYLSSYLAMASAFYFCVLEGVMSV-VDASWHDYFMMRGFDVMLTCTIIFAGIGTFAGGIFYQWRCKAAEQTPSIFKLCWDNIKWMPATALFFASVLFPVTEVCFIYFFGMKASWGATAKEVQNKTSWQALSETLLGYKWEYLLYFVMLGAYSVCLWKFDLGLYKGWSMMSFCCG------HILGPILLNPTI 727          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2046.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G567_ECTSI0.000e+063.96Glyco_trans_2-like domain-containing protein n=2 T... [more]
A0A6H5LE92_9PHAE1.100e-20548.63Glyco_trans_2-like domain-containing protein n=2 T... [more]
A0A7S0PX07_9STRA2.120e-12240.14Hypothetical protein n=1 Tax=Asterionellopsis glac... [more]
G4TGE2_SERID2.930e-11538.61Glyco_trans_2-like domain-containing protein n=1 T... [more]
G2QML7_MYCTT5.070e-11536.23Glyco_trans_2-like domain-containing protein n=2 T... [more]
A0A1Y2FNJ2_PROLT7.480e-11537.76Glycosyl transferase family group 2-domain-contain... [more]
A0A194URL9_9PEZI3.620e-11437.29Glucans biosynthesis glucosyltransferase H n=2 Tax... [more]
G0S0Q5_CHATD4.090e-11436.72Glyco_trans_2-like domain-containing protein n=1 T... [more]
A0A8J9WQ03_9CHLO5.400e-11439.23Probable cellulase/esterase CelE at C-terminar hal... [more]
A0A383VWK9_TETOB1.530e-11335.15Glyco_trans_2-like domain-containing protein n=2 T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig2046contigP-wetherbeei_contig2046:2178..6070 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G567
PFAMsGlyco_trans_2_3
Model size3485
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue0.0
EggNOG OGs28KUH@1|root,2QTAT@2759|Eukaryota
Ec32 ortholog descriptionNucleotide-diphospho-sugar transferases
Ec32 orthologEc-14_006400.1
DescriptionGlycosyl transferase family group 2
Cds size2358
COG categoryS
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186200.3281517-UTR-P-wetherbeei_contig2046:2177..23371683186200.3281517-UTR-P-wetherbeei_contig2046:2177..2337Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig2046 2178..2337 +
1683186200.3694282-UTR-P-wetherbeei_contig2046:5103..60701683186200.3694282-UTR-P-wetherbeei_contig2046:5103..6070Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig2046 5104..6070 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186200.3457642-CDS-P-wetherbeei_contig2046:2337..30751683186200.3457642-CDS-P-wetherbeei_contig2046:2337..3075Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2046 2338..3075 +
1683186200.3607895-CDS-P-wetherbeei_contig2046:3483..51031683186200.3607895-CDS-P-wetherbeei_contig2046:3483..5103Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2046 3484..5103 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig2046.2.1prot_P-wetherbeei_contig2046.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig2046 2338..5103 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig2046.2.1

>prot_P-wetherbeei_contig2046.2.1 ID=prot_P-wetherbeei_contig2046.2.1|Name=mRNA_P-wetherbeei_contig2046.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=786bp
MEEGGDRGRRASSSAGGPATAAPALPARALERKMSSRGKMVHRRGSSSGK
QSSGDMAAAAVQASAGGDARNRPRKASEPQSVVQAVGQEVMSPLRITDKF
NSSRGGGAYIRGEMLTPSPPANWHPTPLFQSKSGGMHLGATGEVDRAPLD
ALAGAEGDPEAGATTKKDERNNHYINYLTVTITHLVIAYALGIQIYKIVM
DALDSGVYITCIALAWYPAAYVFMLFSIDYLVAQIIYSLGPVAHMQQNSK
YFSAVPCPRPDVLPKITIQMPVYKESLPETILPTIQSLTTAILHYKKVGG
EANLLVCDDGLQLISQEERDARLYAYKKHGVSYVARPENSKRERKGLFKK
ASNMNYSLNVALRVEELCDREGASDPVAALELVKAEFAHEFLGAGDVRIG
EVILLVDSDTRIPEDCLAKVSGEFALYGEVGFLQCKSTAIRINDNYWENM
ISHFTNDVYAVGIAMAVSSGDPAPLVGHNVFIRWAAIRDCSQVDPDDGER
KFWSEKHVSEDFDLALRLQAHGFVGRYCTYTGNGFQEGVSLTAADEVIRL
RKYAYGSCEIMLNKFVDWPCSGPVTSMFRRYLFASGVPGPAKIRMIAYLS
TYVAMAFSFYGIVGYLAVWIEAPEVLKYLVNPFDILITVCFVFGALSVFG
AAMITYRGGTGAKVGIFRAFLEQIKNAPIMLLFFSHVLFHLTVVCFRYFF
SMSVQWTASVKESDHLDFFTEVKNTFKRYVGMYLTMLFFAGVVAAAIWYF
QLSWDVRIFVAPAVYIGTHLFGPFLLNPIIMRGYY*
back to top

mRNA from alignment at P-wetherbeei_contig2046:2178..6070+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig2046.2.1 ID=mRNA_P-wetherbeei_contig2046.2.1|Name=mRNA_P-wetherbeei_contig2046.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=3893bp|location=Sequence derived from alignment at P-wetherbeei_contig2046:2178..6070+ (Phaeothamnion wetherbeei SAG_119_79)
TTCGACCGCTCGAGACTTGCCTTTCGCCAACTGTCAGCGAAGGGATTTTG AAAAGTCGGACGTCGGGTCACGGCGCCGGTTGGGCGCTGGAACAGCCTCC CGCGCCGTCGGCTGACCTTTGTAAAGGAATCCCAGCGGCTTGGAGCGCAG CGAGTCGATCATGGAGGAGGGAGGGGACCGAGGAAGGCGAGCGTCGTCGT CGGCCGGAGGACCGGCGACAGCGGCGCCGGCGCTTCCGGCCCGCGCGCTG GAGCGGAAGATGTCTTCGAGAGGGAAGATGGTGCATCGACGGGGTTCGTC GTCGGGCAAGCAATCGAGCGGGGACATGGCGGCGGCGGCGGTGCAAGCTT CGGCCGGGGGGGATGCACGGAATCGGCCACGGAAGGCGAGTGAGCCGCAG TCAGTAGTGCAGGCGGTGGGTCAGGAGGTCATGAGCCCGCTGCGCATCAC GGACAAGTTCAACAGCAGCCGGGGCGGAGGGGCCTACATCCGCGGCGAGA TGCTGACGCCGTCGCCACCGGCCAACTGGCATCCGACGCCGCTCTTCCAG AGCAAGTCGGGGGGCATGCACCTGGGAGCGACGGGAGAGGTCGACCGCGC GCCCTTGGACGCACTGGCGGGCGCCGAGGGTGACCCTGAGGCCGGCGCCA CGACGAAAAAGGACGAGCGCAACAACCACTACATCAACTACCTGACGGTG ACCATCACTCACCTGGTGATCGCCTACGCGCTGGGCATCCAAATCTACAA GATCGTCATGGATGCGCTGGACTCGGGCGTGTACATTACGTGCATCGCCC TGGCTTGGTACCCCGCCGCCTACGTCTTCATGCTCTTCAGCATCGACTAC CTCGTCGCCCAGATCATCTACTCCCTCGGGCCCGTCGCCCATATGCAGGT ACGGTTCGATTTACAGGCCGGGCGGTCGGGCGATCATACAGTCAGTGAAT GTTTTTTCCCTGTCTTTTGGGGTTTTGCCGCCGCCGACGCCAATTGCTTT GGAAAAGGCCATCCTCGCCGAGGCTTTAATCGGCAACGATCGCTTGGGGA ACCTTTGTGAGCATCCGGGGCTGCTGTGGTGTTGCTTTCACGCTCGTTCT TCAATAGAAAGAGGCTAACCTTTCTGTAAAGCCAGCGAGAAGAAAAAGAG GGTTTTATGGGGACGAATGCAGCTGCTGTAATCGCTAGAAGACTCACCGC TTTCCTTCCTTCCTTCTCTTTCCGCTCTTGTTCCTTCTCCTCCTCCGTCC GCGTCTTTCCTTTCTCTTCTGTTGTCGTTCCCTTTTCCAAAATGAAACAC GCGCAGCAAAACTCCAAGTACTTCAGCGCGGTGCCGTGCCCGCGGCCGGA CGTGTTGCCGAAAATCACCATCCAGATGCCTGTCTACAAGGAATCGCTGC CCGAGACCATCCTGCCGACCATCCAGTCCCTGACGACTGCCATCCTCCAC TACAAGAAAGTCGGCGGCGAGGCCAACCTTCTTGTCTGCGACGATGGCCT GCAGCTCATCTCGCAGGAGGAGCGCGACGCGCGCCTCTACGCATACAAAA AGCACGGCGTCTCGTATGTTGCCCGCCCCGAAAACTCCAAGCGCGAGCGC AAGGGGCTCTTCAAGAAAGCCTCCAACATGAACTACTCGCTCAACGTGGC GCTGCGCGTGGAGGAGCTCTGCGACCGCGAAGGCGCGTCGGACCCCGTCG CGGCGCTGGAGCTGGTCAAGGCGGAGTTTGCGCACGAGTTCCTTGGTGCG GGCGACGTCCGCATCGGCGAAGTCATCCTTCTAGTGGACTCGGACACGCG CATCCCGGAAGACTGCCTGGCGAAGGTGTCCGGCGAGTTCGCGCTGTACG GCGAGGTGGGCTTCTTGCAGTGCAAGTCGACGGCCATCCGCATCAACGAC AACTACTGGGAGAACATGATCAGCCACTTCACCAACGACGTCTACGCCGT CGGTATCGCCATGGCCGTGTCATCGGGCGACCCGGCGCCGCTCGTCGGCC ACAACGTCTTCATCCGCTGGGCGGCCATCCGCGACTGCTCGCAGGTCGAC CCGGACGACGGCGAGCGCAAGTTCTGGTCGGAGAAGCATGTCTCAGAGGA CTTCGACCTCGCGCTGCGGCTGCAAGCGCACGGCTTCGTCGGGCGCTACT GCACCTACACGGGCAACGGCTTCCAGGAGGGCGTGTCGCTGACGGCGGCC GACGAGGTGATTCGGCTGCGCAAGTACGCCTACGGCAGCTGCGAGATCAT GCTCAACAAGTTCGTCGACTGGCCGTGCTCTGGCCCCGTCACGTCCATGT TTCGGCGCTACCTGTTCGCATCCGGCGTGCCGGGCCCGGCCAAGATCCGC ATGATTGCGTACCTGTCGACGTACGTCGCCATGGCCTTCTCGTTCTACGG CATCGTGGGCTACCTGGCGGTGTGGATCGAGGCGCCCGAGGTGCTCAAGT ACCTTGTCAACCCGTTCGACATCCTTATCACCGTCTGCTTCGTCTTCGGC GCGCTGTCGGTCTTCGGTGCCGCCATGATCACGTACCGCGGCGGCACCGG CGCCAAGGTCGGCATCTTCCGCGCCTTCCTCGAGCAGATCAAGAACGCGC CCATCATGCTCCTTTTCTTCTCACACGTCCTCTTCCACCTGACGGTGGTC TGCTTCCGCTACTTCTTCAGCATGTCGGTGCAGTGGACGGCCTCCGTCAA GGAGTCGGACCACCTCGACTTCTTCACCGAGGTCAAGAACACCTTCAAGC GCTACGTCGGCATGTATCTCACCATGCTCTTCTTTGCTGGTGTCGTCGCC GCCGCCATATGGTACTTCCAGCTGTCGTGGGACGTCCGGATTTTCGTGGC GCCGGCGGTCTACATTGGCACGCACCTCTTCGGGCCATTCCTGCTCAACC CCATCATCATGCGCGGCTACTACTGAACCAGCCATCAGGCGTGCAGGCGA AGGGCAGAGCGGGTCGGGCGTTTCGGCCGGTTCGGCCGGCCGGCTGTTCA AGGGTGCCTTTTGCGGCGGTTCAGGGGGGCCTTTAGGCGGCCCGATGGCG GCGTCGGCTTGGCGACGGCGGCGGCGGTGCTGACGGCAGCGTTGCTGGCG GCGGGCAGCTGCAACGGCGGCAGCGGCGGCAGTTGCTGCAGTGATAGACC GGCGGCCGCGGATATAGCGGTGCGGCGGTGGCGGAGGCGAAGGCGCCAGT TGCCGCCCGGCGCTTGCGGCGGCCGCCGCGGCATGAAAATGCGCGCTGAG GCCTTGGCTTTGGCTCGTGCGCTGCCGCGGCATTTTGAGGGGAGAGATAG CGGCGGCGACGGTGGACGGCAACGCTGCCGCCATTGCTGCCGCCATTGCC GCTGCCGCGGCTACTGGCTGCCCCAGAGAGGGGCCAAAACGGGAGTGGAG GAGGCGGGCAGGCGGCTTGCGCGGCGCCATAGCGGCGCTGCCTAGCCGGC GGCAGCGGCGCGCGACTGGAGACGATGCATCTAGCGGCAAACTTATCGAG GAGCGGCGGCACGGCCTGCCTTCGGATGTCTTATCGCACTGGAGAGAGCA GGAGGCTGTGGCAGCACCAGCAGCAGCGGCGGCGGAGCCGCTAGTTCGGA AATTCTTCGTGGCGGGGCCTCTCCCAAAAGGCGGTGAGAGGAAGGAGTTG AGGAGGATGGGACAGGGGACCCATCTTAAGCGTTTCATTCCAGTTTGCGC CGATTATTGCGTCAAAGGCGGCTGGGGCGGCGCGGCACCGCGCCCTCAGC AGCCCGATGGTACGGCTGTGCCCCTCGGCAGCGTTAGCGTTCTTTGAGAG ACAACTGACTGCTGGCGCTTACAGCAGGAGATTAGCAAGAGACGAAACCC GGGGCTGCGGTGGCGGACGGCATTGGACGCTCCATGTCCGTTG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig2046:2178..6070+

>mRNA_P-wetherbeei_contig2046.2.1 ID=mRNA_P-wetherbeei_contig2046.2.1|Name=mRNA_P-wetherbeei_contig2046.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2358bp|location=Sequence derived from alignment at P-wetherbeei_contig2046:2178..6070+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGAGGAGGGAGGGGACCGAGGAAGGCGAGCGTCGTCGTCGGCCGGAGG
ACCGGCGACAGCGGCGCCGGCGCTTCCGGCCCGCGCGCTGGAGCGGAAGA
TGTCTTCGAGAGGGAAGATGGTGCATCGACGGGGTTCGTCGTCGGGCAAG
CAATCGAGCGGGGACATGGCGGCGGCGGCGGTGCAAGCTTCGGCCGGGGG
GGATGCACGGAATCGGCCACGGAAGGCGAGTGAGCCGCAGTCAGTAGTGC
AGGCGGTGGGTCAGGAGGTCATGAGCCCGCTGCGCATCACGGACAAGTTC
AACAGCAGCCGGGGCGGAGGGGCCTACATCCGCGGCGAGATGCTGACGCC
GTCGCCACCGGCCAACTGGCATCCGACGCCGCTCTTCCAGAGCAAGTCGG
GGGGCATGCACCTGGGAGCGACGGGAGAGGTCGACCGCGCGCCCTTGGAC
GCACTGGCGGGCGCCGAGGGTGACCCTGAGGCCGGCGCCACGACGAAAAA
GGACGAGCGCAACAACCACTACATCAACTACCTGACGGTGACCATCACTC
ACCTGGTGATCGCCTACGCGCTGGGCATCCAAATCTACAAGATCGTCATG
GATGCGCTGGACTCGGGCGTGTACATTACGTGCATCGCCCTGGCTTGGTA
CCCCGCCGCCTACGTCTTCATGCTCTTCAGCATCGACTACCTCGTCGCCC
AGATCATCTACTCCCTCGGGCCCGTCGCCCATATGCAGCAAAACTCCAAG
TACTTCAGCGCGGTGCCGTGCCCGCGGCCGGACGTGTTGCCGAAAATCAC
CATCCAGATGCCTGTCTACAAGGAATCGCTGCCCGAGACCATCCTGCCGA
CCATCCAGTCCCTGACGACTGCCATCCTCCACTACAAGAAAGTCGGCGGC
GAGGCCAACCTTCTTGTCTGCGACGATGGCCTGCAGCTCATCTCGCAGGA
GGAGCGCGACGCGCGCCTCTACGCATACAAAAAGCACGGCGTCTCGTATG
TTGCCCGCCCCGAAAACTCCAAGCGCGAGCGCAAGGGGCTCTTCAAGAAA
GCCTCCAACATGAACTACTCGCTCAACGTGGCGCTGCGCGTGGAGGAGCT
CTGCGACCGCGAAGGCGCGTCGGACCCCGTCGCGGCGCTGGAGCTGGTCA
AGGCGGAGTTTGCGCACGAGTTCCTTGGTGCGGGCGACGTCCGCATCGGC
GAAGTCATCCTTCTAGTGGACTCGGACACGCGCATCCCGGAAGACTGCCT
GGCGAAGGTGTCCGGCGAGTTCGCGCTGTACGGCGAGGTGGGCTTCTTGC
AGTGCAAGTCGACGGCCATCCGCATCAACGACAACTACTGGGAGAACATG
ATCAGCCACTTCACCAACGACGTCTACGCCGTCGGTATCGCCATGGCCGT
GTCATCGGGCGACCCGGCGCCGCTCGTCGGCCACAACGTCTTCATCCGCT
GGGCGGCCATCCGCGACTGCTCGCAGGTCGACCCGGACGACGGCGAGCGC
AAGTTCTGGTCGGAGAAGCATGTCTCAGAGGACTTCGACCTCGCGCTGCG
GCTGCAAGCGCACGGCTTCGTCGGGCGCTACTGCACCTACACGGGCAACG
GCTTCCAGGAGGGCGTGTCGCTGACGGCGGCCGACGAGGTGATTCGGCTG
CGCAAGTACGCCTACGGCAGCTGCGAGATCATGCTCAACAAGTTCGTCGA
CTGGCCGTGCTCTGGCCCCGTCACGTCCATGTTTCGGCGCTACCTGTTCG
CATCCGGCGTGCCGGGCCCGGCCAAGATCCGCATGATTGCGTACCTGTCG
ACGTACGTCGCCATGGCCTTCTCGTTCTACGGCATCGTGGGCTACCTGGC
GGTGTGGATCGAGGCGCCCGAGGTGCTCAAGTACCTTGTCAACCCGTTCG
ACATCCTTATCACCGTCTGCTTCGTCTTCGGCGCGCTGTCGGTCTTCGGT
GCCGCCATGATCACGTACCGCGGCGGCACCGGCGCCAAGGTCGGCATCTT
CCGCGCCTTCCTCGAGCAGATCAAGAACGCGCCCATCATGCTCCTTTTCT
TCTCACACGTCCTCTTCCACCTGACGGTGGTCTGCTTCCGCTACTTCTTC
AGCATGTCGGTGCAGTGGACGGCCTCCGTCAAGGAGTCGGACCACCTCGA
CTTCTTCACCGAGGTCAAGAACACCTTCAAGCGCTACGTCGGCATGTATC
TCACCATGCTCTTCTTTGCTGGTGTCGTCGCCGCCGCCATATGGTACTTC
CAGCTGTCGTGGGACGTCCGGATTTTCGTGGCGCCGGCGGTCTACATTGG
CACGCACCTCTTCGGGCCATTCCTGCTCAACCCCATCATCATGCGCGGCT
ACTACTGA
back to top