mRNA_P-wetherbeei_contig2043.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig2043.3.1
Unique NamemRNA_P-wetherbeei_contig2043.3.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig2043.3.1 vs. uniprot
Match: A0A6H5L0D9_9PHAE (PIG-H domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L0D9_9PHAE)

HSP 1 Score: 143 bits (361), Expect = 5.530e-40
Identity = 67/97 (69.07%), Postives = 84/97 (86.60%), Query Frame = 1 
Query:  112 RFSVREESLLVIQELGVQLTVKYADGREKSKFIDRAKIKAVIINEGVTMHRVVFYMAFVVEGSDCMIVAFEHLRPRLDALLRVYRGTRAAVFGEEED 402
            R  VREESLLV++ELGVQ+T  Y DGREKS F+D+AKIKA++INEG+TMHRVVFY+AFVV G D M+VAFE+L+PRL+ L+++YRGTRAA+ GE  D
Sbjct:   74 RSRVREESLLVVRELGVQVTTTYVDGREKSTFLDKAKIKAILINEGITMHRVVFYLAFVVAGRDKMVVAFENLQPRLNVLIKIYRGTRAAILGEAGD 170
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BLAST of mRNA_P-wetherbeei_contig2043.3.1 vs. uniprot
Match: A0A397THB2_9GLOM (GPI-GlcNAc transferase complex, PIG-H component-domain-containing protein n=1 Tax=Glomus cerebriforme TaxID=658196 RepID=A0A397THB2_9GLOM)

HSP 1 Score: 114 bits (284), Expect = 5.230e-30
Identity = 53/96 (55.21%), Postives = 74/96 (77.08%), Query Frame = 1 
Query:  121 VREESLLVIQELGVQLTVKYADGREKSKFIDRAKIKAVIINEGVTMHRVVFYMAFVVEGSDCMIVAFEHLRPRLDALLRVYRGTRAAVFGEEEDHS 408
            VREES+L ++++G+Q+   Y +GR  S+FIDR+KI  +IINEG+TM +V FYM  +VEG D M+V FEHL P+L+ LL+VYRGTR  +F E E++S
Sbjct:   13 VREESILSVRDVGIQVKTIYMNGRSVSRFIDRSKISDIIINEGITMLQVKFYMVIIVEGRDRMVVVFEHLLPKLNVLLQVYRGTRYVIFNEIEENS 108
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BLAST of mRNA_P-wetherbeei_contig2043.3.1 vs. uniprot
Match: A0A0H5RAZ1_9EUKA (PIG-H domain-containing protein n=1 Tax=Spongospora subterranea TaxID=70186 RepID=A0A0H5RAZ1_9EUKA)

HSP 1 Score: 115 bits (287), Expect = 6.430e-30
Identity = 64/133 (48.12%), Postives = 92/133 (69.17%), Query Frame = 1 
Query:    1 LLASVACYFALSHVSRQGFVIVCICLLVGGLSGLLVRRFSVREESLLVIQELGVQLTVKYADGREKSKFIDRAKIKAVIINEGVTMHRVVFYMAFVVEGSDCMIVAFEHLRPRLDALLRVYRGTRAAVFGEEE 399
            +L S+AC    S +    F+I+CICL+   ++ L+    +V EE+LLV+QELGVQ+T K   G+E   FID+ KI +++INEG+TM RV++YMAF+V G   M++AF +L PR+  LL +Y GTRAA +GE E
Sbjct:   41 ILISIAC--RQSIILTDPFLIICICLMTWRITSLMK---TVCEETLLVVQELGVQITRKSFSGKESHVFIDKDKISSIVINEGITMFRVIYYMAFIVNGQSDMVLAF-NLLPRMGVLLPIYVGTRAAFYGEPE 167
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BLAST of mRNA_P-wetherbeei_contig2043.3.1 vs. uniprot
Match: A0A015KF86_RHIIW (PIG-H domain-containing protein n=5 Tax=Rhizophagus TaxID=1129544 RepID=A0A015KF86_RHIIW)

HSP 1 Score: 113 bits (283), Expect = 6.710e-29
Identity = 53/96 (55.21%), Postives = 75/96 (78.12%), Query Frame = 1 
Query:  121 VREESLLVIQELGVQLTVKYADGREKSKFIDRAKIKAVIINEGVTMHRVVFYMAFVVEGSDCMIVAFEHLRPRLDALLRVYRGTRAAVFGEEEDHS 408
            V+EES+L I+++G+Q+   Y +GR  SKFID++KI  +IINEG+TM +V FYMA +V+G D M+V FEHL P+L+ LL+VYRGTR  +F E E++S
Sbjct:   93 VKEESILSIRDVGIQVKTIYMNGRSVSKFIDKSKISDIIINEGITMLQVKFYMAIIVDGQDRMVVVFEHLLPKLNILLQVYRGTRYVIFNEIEENS 188
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BLAST of mRNA_P-wetherbeei_contig2043.3.1 vs. uniprot
Match: D3BEJ0_POLPP (Putative glycosyltransferase n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BEJ0_POLPP)

HSP 1 Score: 113 bits (282), Expect = 8.130e-29
Identity = 54/101 (53.47%), Postives = 79/101 (78.22%), Query Frame = 1 
Query:  100 LLVRRFSVREESLLVIQELGVQLTVKYADGREKSKFIDRAKIKAVIINEGVTMHRVVFYMAFVVEGSDCMIVAFEHLRPRLDALLRVYRGTRAAVFGEEED 402
            L ++ F VREESL VI+ELGVQL  KY    E ++FI++ KI+++IINEG++ +RV FYMAF+VEG   M++AF+ L PR++ LL++YRGTR+ ++GE E+
Sbjct:   98 LFLKLFIVREESLTVIRELGVQLRKKYYFIGESTRFIEKPKIQSIIINEGISRYRVTFYMAFLVEGKQKMVLAFDDLIPRINVLLKIYRGTRSLMYGEPEE 198
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BLAST of mRNA_P-wetherbeei_contig2043.3.1 vs. uniprot
Match: UPI0006450F5E (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006450F5E)

HSP 1 Score: 110 bits (275), Expect = 3.630e-28
Identity = 53/100 (53.00%), Postives = 79/100 (79.00%), Query Frame = 1 
Query:  100 LLVRRFSVREESLLVIQELGVQLTVKYADGREKSKFIDRAKIKAVIINEGVTMHRVVFYMAFVVEGSDCMIVAFEHLRPRLDALLRVYRGTRAAVFGEEE 399
            L ++ F +REESL VI+ELG+QL  KY   +E  +FI++++I ++IINEG++ +RVV+YMAF+VEG   MI+AF+ L PR++ LL++YRGTRA ++GE E
Sbjct:   65 LCLKMFIIREESLTVIRELGIQLRKKYLL-KETVEFIEKSRISSIIINEGISRYRVVYYMAFIVEGKQKMILAFDDLIPRINVLLKIYRGTRALMYGENE 163
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BLAST of mRNA_P-wetherbeei_contig2043.3.1 vs. uniprot
Match: A0A6B2LLF0_9EUKA (PIG-H domain-containing protein n=1 Tax=Arcella intermedia TaxID=1963864 RepID=A0A6B2LLF0_9EUKA)

HSP 1 Score: 107 bits (267), Expect = 2.080e-27
Identity = 49/90 (54.44%), Postives = 70/90 (77.78%), Query Frame = 1 
Query:  121 VREESLLVIQELGVQLTVKYADGREKSKFIDRAKIKAVIINEGVTMHRVVFYMAFVVEGSDCMIVAFEHLRPRLDALLRVYRGTRAAVFG 390
            V+EESLLVI++LGVQ+  KY  G   S+FIDR KIK++IINEG+TM  ++FYMA +V   + M++ F+ LRPR+D LL +++G+RA +FG
Sbjct:   36 VKEESLLVIRDLGVQINTKYYSGGGTSEFIDRKKIKSIIINEGITMGDIIFYMAIIVRKKEKMVIVFKTLRPRIDTLLDIFKGSRAIMFG 125
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BLAST of mRNA_P-wetherbeei_contig2043.3.1 vs. uniprot
Match: A0A397VZ59_9GLOM (GPI-GlcNAc transferase complex, PIG-H component-domain-containing protein (Fragment) n=1 Tax=Gigaspora rosea TaxID=44941 RepID=A0A397VZ59_9GLOM)

HSP 1 Score: 106 bits (264), Expect = 3.150e-27
Identity = 47/93 (50.54%), Postives = 71/93 (76.34%), Query Frame = 1 
Query:  124 REESLLVIQELGVQLTVKYADGREKSKFIDRAKIKAVIINEGVTMHRVVFYMAFVVEGSDCMIVAFEHLRPRLDALLRVYRGTRAAVFGEEED 402
            ++ES+L I+++G+Q+   Y +GR  S+FI+R+KI  +IINEG+TM +V FYMA +VEG D M+V F+HL P+   L++VYRGTR+ +F E E+
Sbjct:    1 QKESILSIRDIGIQVETVYINGRTVSRFIERSKISDIIINEGITMLQVKFYMAIIVEGQDKMVVVFQHLLPKYSILIQVYRGTRSIIFNESEE 93
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BLAST of mRNA_P-wetherbeei_contig2043.3.1 vs. uniprot
Match: A0A8H4AU32_GIGMA (GPI-GlcNAc transferase complex, PIG-H component-domain-containing protein n=3 Tax=Gigaspora margarita TaxID=4874 RepID=A0A8H4AU32_GIGMA)

HSP 1 Score: 108 bits (269), Expect = 6.930e-27
Identity = 48/94 (51.06%), Postives = 72/94 (76.60%), Query Frame = 1 
Query:  121 VREESLLVIQELGVQLTVKYADGREKSKFIDRAKIKAVIINEGVTMHRVVFYMAFVVEGSDCMIVAFEHLRPRLDALLRVYRGTRAAVFGEEED 402
            V++ES+L I+++G+Q+   Y +GR  S+FI+R+KI  +IINEG+TM +V FYMA +VEG D M+V F+HL P+   L++VYRGTR+ +F E E+
Sbjct:   92 VKQESILSIRDIGIQVETVYINGRTVSRFIERSKISDIIINEGITMLQVKFYMAIIVEGQDRMVVVFQHLLPKYSILIQVYRGTRSIIFNESEE 185
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BLAST of mRNA_P-wetherbeei_contig2043.3.1 vs. uniprot
Match: A0A151ZSC7_9MYCE (PIG-H domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZSC7_9MYCE)

HSP 1 Score: 105 bits (263), Expect = 2.750e-26
Identity = 51/97 (52.58%), Postives = 71/97 (73.20%), Query Frame = 1 
Query:  109 RRFSVREESLLVIQELGVQLTVKYADGREKSKFIDRAKIKAVIINEGVTMHRVVFYMAFVVEGSDCMIVAFEHLRPRLDALLRVYRGTRAAVFGEEE 399
            + +  +EESL+V++ELGVQL  KY    E  +FID+ KI+ +IINEG+T H V+FYM F+VEG + M++AFE L PR D LL++YRGT A ++G  E
Sbjct:   70 KLYIAKEESLIVMRELGVQLKRKYYFRPEIIEFIDKTKIEQIIINEGITHHSVIFYMCFLVEGKNKMVLAFEDLVPRRDVLLQIYRGTLALMYGNSE 166
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2043.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5L0D9_9PHAE5.530e-4069.07PIG-H domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A397THB2_9GLOM5.230e-3055.21GPI-GlcNAc transferase complex, PIG-H component-do... [more]
A0A0H5RAZ1_9EUKA6.430e-3048.12PIG-H domain-containing protein n=1 Tax=Spongospor... [more]
A0A015KF86_RHIIW6.710e-2955.21PIG-H domain-containing protein n=5 Tax=Rhizophagu... [more]
D3BEJ0_POLPP8.130e-2953.47Putative glycosyltransferase n=1 Tax=Polysphondyli... [more]
UPI0006450F5E3.630e-2853.00hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A6B2LLF0_9EUKA2.080e-2754.44PIG-H domain-containing protein n=1 Tax=Arcella in... [more]
A0A397VZ59_9GLOM3.150e-2750.54GPI-GlcNAc transferase complex, PIG-H component-do... [more]
A0A8H4AU32_GIGMA6.930e-2751.06GPI-GlcNAc transferase complex, PIG-H component-do... [more]
A0A151ZSC7_9MYCE2.750e-2652.58PIG-H domain-containing protein n=1 Tax=Tieghemost... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig2043contigP-wetherbeei_contig2043:4154..4803 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FTR8
Preferred namePIGH
PFAMsPIG-H
Model size408
Max annot lvl2759|Eukaryota
KEGG koko:K03858,ko:K14650
KEGG ReactionR05916
KEGG Pathwayko00563,ko01100,ko03022,ko05168,map00563,map01100,map03022,map05168
Hectar predicted targeting categorysignal peptide
GOsGO:0000506,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006497,GO:0006505,GO:0006506,GO:0006629,GO:0006643,GO:0006644,GO:0006650,GO:0006661,GO:0006664,GO:0006793,GO:0006796,GO:0006807,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009059,GO:0009247,GO:0009987,GO:0012505,GO:0016020,GO:0016254,GO:0019538,GO:0019637,GO:0031984,GO:0032991,GO:0034645,GO:0036211,GO:0042157,GO:0042158,GO:0042175,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046467,GO:0046474,GO:0046486,GO:0046488,GO:0071704,GO:0090407,GO:0098796,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1903509,GO:1990234
Exons2
Evalue1.22e-40
EggNOG OGsKOG4551@1|root,KOG4551@2759|Eukaryota
Ec32 ortholog descriptionGPI-GlcNAc transferase complex, PIG-H component, conserved domain
Ec32 orthologEc-14_001090.1
Descriptionphosphatidylinositol N-acetylglucosaminyltransferase activity
Cds size408
COG categoryS
BRITEko00000,ko00001,ko03021
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186199.5880532-CDS-P-wetherbeei_contig2043:4153..43571683186199.5880532-CDS-P-wetherbeei_contig2043:4153..4357Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2043 4154..4357 -
1683186199.6030376-CDS-P-wetherbeei_contig2043:4599..48031683186199.6030376-CDS-P-wetherbeei_contig2043:4599..4803Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2043 4600..4803 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig2043.3.1prot_P-wetherbeei_contig2043.3.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig2043 4154..4803 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig2043.3.1

>prot_P-wetherbeei_contig2043.3.1 ID=prot_P-wetherbeei_contig2043.3.1|Name=mRNA_P-wetherbeei_contig2043.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=136bp
LLASVACYFALSHVSRQGFVIVCICLLVGGLSGLLVRRFSVREESLLVIQ
ELGVQLTVKYADGREKSKFIDRAKIKAVIINEGVTMHRVVFYMAFVVEGS
DCMIVAFEHLRPRLDALLRVYRGTRAAVFGEEEDHS
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mRNA from alignment at P-wetherbeei_contig2043:4154..4803-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig2043.3.1 ID=mRNA_P-wetherbeei_contig2043.3.1|Name=mRNA_P-wetherbeei_contig2043.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=650bp|location=Sequence derived from alignment at P-wetherbeei_contig2043:4154..4803- (Phaeothamnion wetherbeei SAG_119_79)
TTGCTGGCGTCTGTGGCGTGCTATTTCGCGCTTTCTCACGTCAGCAGGCA
GGGATTTGTCATTGTTTGTATCTGCCTTCTCGTTGGCGGGCTGAGTGGCC
TCCTCGTGCGTCGCTTCAGCGTCCGCGAAGAGTCCCTCCTCGTCATCCAG
GAGCTGGGAGTGCAGCTTACGGTGAAATATGCGGACGGCAGGGAGAAGAG
CAAGGTGCGTGGATGGTTTTGCATTCCCACTGCTTCGCCAGTTGGGCACT
TTTCTGAGCCTTTTCTCTGAGAGCTGTGCCTCTTCCGACATATTCAAGAC
CTCTGTGCCTCTCTCAATCCATTTCAAACGTTTTCTTTCTTCATCTGCCG
CTGCCCAGCTTTGCCTCTGCATGCCACCCCTCCACACCGCCCGTCCTGCC
CCAATCCATTCGGTCGACCGGCCTGGCTGCCCCACCGGTGGAGCAGTTCA
TCGACCGCGCCAAAATCAAGGCCGTCATAATCAATGAAGGCGTCACAATG
CACCGCGTCGTCTTCTATATGGCATTTGTGGTGGAGGGCAGCGACTGCAT
GATTGTCGCCTTTGAGCACCTCCGCCCACGCCTTGACGCCCTGCTGCGCG
TCTACCGCGGCACGCGCGCCGCCGTCTTTGGGGAGGAGGAGGACCATTCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig2043:4154..4803-

>mRNA_P-wetherbeei_contig2043.3.1 ID=mRNA_P-wetherbeei_contig2043.3.1|Name=mRNA_P-wetherbeei_contig2043.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=408bp|location=Sequence derived from alignment at P-wetherbeei_contig2043:4154..4803- (Phaeothamnion wetherbeei SAG_119_79)
TTGCTGGCGTCTGTGGCGTGCTATTTCGCGCTTTCTCACGTCAGCAGGCA
GGGATTTGTCATTGTTTGTATCTGCCTTCTCGTTGGCGGGCTGAGTGGCC
TCCTCGTGCGTCGCTTCAGCGTCCGCGAAGAGTCCCTCCTCGTCATCCAG
GAGCTGGGAGTGCAGCTTACGGTGAAATATGCGGACGGCAGGGAGAAGAG
CAAGTTCATCGACCGCGCCAAAATCAAGGCCGTCATAATCAATGAAGGCG
TCACAATGCACCGCGTCGTCTTCTATATGGCATTTGTGGTGGAGGGCAGC
GACTGCATGATTGTCGCCTTTGAGCACCTCCGCCCACGCCTTGACGCCCT
GCTGCGCGTCTACCGCGGCACGCGCGCCGCCGTCTTTGGGGAGGAGGAGG
ACCATTCC
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