mRNA_P-wetherbeei_contig204.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig204.1.1 vs. uniprot
Match: A0A5D6YC19_9STRA (3'-5' exonuclease domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YC19_9STRA) HSP 1 Score: 157 bits (398), Expect = 5.580e-35 Identity = 139/443 (31.38%), Postives = 203/443 (45.82%), Query Frame = 2
Query: 173 WAEDGIVRLLIIRLHAGENVETKAFLKPIFKFLQRG--QTSQND---VEMAFCYVSWLAQLADIGDPTRNLPPQPHLQPAYAFNTLVTCCQRGRRRESACRAYAEMLRRGYRPEFFVHTAMIDVLSRLGDPVAALQVYDWMKRSPEAAEVRPNVVTFATTIRVAAAVPAARSASAAPPVTASSLAVTAARMETPPILEAMLAVLQDAEESLGQPDAVVYNAALAGCEELAAADSATDGSGSIGPIGLADVTLHVLRQMRQTGAVPDAQTAALLRRIDESLVRRGMAPVLSDPAMTHGGCGGTLAGW----LETALHNIPPVALQSATATSAAQEDSGYLGCLGPSSSETLRDQVILHDLEKLAERLGQAGAGADANGVAAAAEGGPMTADGSASAVAGSNNGVRSIQTESLSRGDFETLIHQCRKRKWSYQVLLVLRAMETIS 1474
W +D R ++ +L GE +ET+AFL+PIF++++ G + D +E AF +V+W+ QL+ GD R L P LQP+YA NT+VT QR R A RA+ +L GY P+ F +TA+IDV+SR GD AA+++Y M+ + RPN+VTF T IR A + TAA +E L LQDA + +++ + A L C + + ++A VLR++ A + R E +VR + VL + L W L TA ++ + + SAA+ + G LG +S+++R VI HD+ +LAERL +GVA +S DFETLIHQCRKRKW V L L AM ++
Sbjct: 29 WEDDDFTRDIVEQLQRGEALETRAFLRPIFRWMKHGVHKNGARDAAMIEAAFAFVAWMVQLSTAGDAARGLAAMPELQPSYALNTIVTASQRAGSRVDAERAFRLLLAHGYEPDVFTYTALIDVMSRTGDVSAAMEMYAHMRTTKS----RPNIVTFTTLIR------------------AVGFSCTAAPLEC-------LRFLQDARQEERFDESLFWEA-LDACAQRRSVEAAG----------------AVLREL--------AGCEGSVARDSERVVR-ALTQVLREHERAEQ--DRVLEQWFAVLLVTAEERSRVLSADVSASASAARAAAKMGGFLGEQTSDSVRLAVIEHDITRLAERL--------RDGVA-------------------------------VSTNDFETLIHQCRKRKWKEGVALTLTAMRRMA 375
BLAST of mRNA_P-wetherbeei_contig204.1.1 vs. uniprot
Match: A0A2D4BS67_PYTIN (3'-5' exonuclease domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BS67_PYTIN) HSP 1 Score: 119 bits (297), Expect = 4.050e-23 Identity = 108/368 (29.35%), Postives = 166/368 (45.11%), Query Frame = 2
Query: 173 WAEDGIVRLLIIRLHAGENVETKAFLKPIFKFLQRG----QTSQND-VEMAFCYVSWLAQLADIGDPTRNLPPQPHLQPAYAFNTLVTCCQRGRRRESACRAYAEMLRRGYRPEFFVHTAMIDVLSRLGDPVAALQVYDWMKRSPEAAEVRPNVVTFATTIRVAAAVPAARSASAAPPVTASSLAVTAARMETPPILEAMLAVLQDAEESLGQPDAVVYNAALAGC---EELAAADSATDGSGSIGPIGLADVTLHVLRQMRQTGAVPDAQTAALLRRIDESLVRRGMAPVLSDPAMTHGGCGGTLAGWLETALHNIPPV-ALQSATATSAAQEDSGYLGCLGPSSSETLRDQVILHDLEKLAERLGQ 1249
W D + L+ L +G VET+AFL+PIFK+++ G QN+ +E AF +V W+ QL GD R +P LQP+YA NT+VT QR A RA+ + GY P+ F +TA+IDV++R D A++ Y+ M+ + +PN+VT T IR S+ T + P + AEE+ D +Y AL C ++LA A + L V +H + +R + + R D++ V WL+ L V A+++A+A+S S LGCLG +S+T+R V+ HD+ +L ER+ +
Sbjct: 6 WERDELTXDLVSELQSGVVVETRAFLRPIFKWMKTGIRKNGXKQNEPIEKAFAFVHWMVQLTREGDAARGIPRLERLQPSYALNTIVTSSQRAGSLPEAQRAFDLLHEYGYEPDVFTYTALIDVIARNHDIRGAIKRYEEMRLTKS----KPNIVTITTMIR--------------------SIGFT---HDVDPSVCLTFLEHARAEEAF---DEALYVDALDVCAIRQDLATARAV-----------LQQVAVHAMA-LRDSDRLVKVLAKFFRPRDDQAEVTTA---------------------WLKDGLLTQTEVDAMENASASSTNCNGSKTLGCLGNQTSDTVRQAVVQHDINRLVERIAE 310
BLAST of mRNA_P-wetherbeei_contig204.1.1 vs. uniprot
Match: A0A067BQL3_SAPPC (3'-5' exonuclease domain-containing protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BQL3_SAPPC) HSP 1 Score: 117 bits (292), Expect = 1.580e-22 Identity = 118/405 (29.14%), Postives = 166/405 (40.99%), Query Frame = 2
Query: 287 SQNDVEMAFCYVSWLAQLADIGDPTRNLPPQPHLQPAYAFNTLVTCCQRGRRRESACRAYAEMLRRGYRPEFFVHTAMIDVLSRLGDPVAALQVYDWMKRSPEAAEVRPNVVTFATTIRVAAAVPAARSASAAPPVTASSLAVTAARMETPPILEAMLAVLQDAEESLGQPDAVVYNAALAGCEELAAADSATDGSGSIGPIGLADVTLHVLRQMRQTGAVPDAQTAALLRRIDESLVRRG------MAPVLSDPAMTHGGCGGTLAGW-LETALHNIPPVALQSATATSAAQEDSGYLGCLGPSSSETLRDQVILHDLEKLAERLGQAGAGADANGVAAAAEGGPMTADGSASAVAGSNNGVRSIQTESLSRGDFETLIHQCRKRKWSYQVLLVLRAMETISGD 1480
++ + E A+ YV WL QL GD ++P QP +Q YA NTL+T QR + A RA+ + G+ P+ F +TA+IDVL R L +Y M A +V+PN+VTF T IRV A M + +L VL+ A D +Y AL C + A D V VL+Q RR+D L G + V+ DP+ T+ W L+ L L S + +S++ D Y GCLG + ++R VILHD+++L ER+ V+ + + DFETLIHQCRKRKW QV +V AM T++ D
Sbjct: 39 AKREPEKAYAYVLWLLQLHAAGD--GDIPAQPTIQANYAINTLITASQRCGKAMEAQRAFDLLALHGFTPDVFAYTALIDVLGRGQQADVGLAMYKQML----ATDVQPNIVTFTTIIRVLA-------------------------MSDTVDVTYVLKVLEHARLLDKTCDPSLYTEALETCAKRKALD----------------VITGVLQQ----------------RRLDYGLELLGDKSISAIGRVVRDPSSMP-----TVDAWVLDGLLDAADKARLFSTSTSSSSVTDDKYQGCLGYETPASVRQSVILHDIDRLIERV------------------------------------VKGVLPTKM---DFETLIHQCRKRKWRDQVHVVFNAMTTLAHD 336
BLAST of mRNA_P-wetherbeei_contig204.1.1 vs. uniprot
Match: T0Q0N9_SAPDV (3'-5' exonuclease domain-containing protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0Q0N9_SAPDV) HSP 1 Score: 113 bits (283), Expect = 1.820e-21 Identity = 111/397 (27.96%), Postives = 162/397 (40.81%), Query Frame = 2
Query: 287 SQNDVEMAFCYVSWLAQLADIGDPTRNLPPQPHLQPAYAFNTLVTCCQRGRRRESACRAYAEMLRRGYRPEFFVHTAMIDVLSRLGDPVAALQVYDWMKRSPEAAEVRPNVVTFATTIRVAAAVPAARSASAAPPVTASSLAVTAARMETPPILEAMLAVLQDAEESLGQPDAVVYNAALAGCEELAAADSATDGSGSIGPIGLADVTLHVLRQMRQTGAVPDAQTAALLRRIDESLVRRGMAPVLSDPAMTHGGCGGTLA-GWLETALHNIPPVALQSATATSAAQEDSGYLGCLGPSSSETLRDQVILHDLEKLAERLGQAGAGADANGVAAAAEGGPMTADGSASAVAGSNNGVRSIQTESLSRGDFETLIHQCRKRKWSYQVLLVLRAMETIS 1474
++ + E A+ YV WL QL + GD ++P QP +Q YA NTL+T QR + A RA+ + G+ P+ F +TA+IDVL R L +Y M A +V+PN+VTF T IRV A M + +L VL+ A D +Y AL C + A D V VL+Q RR+D L G +L+ + + GW+ L + ++S++ D Y GCLG + ++R VILHD+++L ER+ ++ + + DFETLIHQCRKRKW QV +V AM T++
Sbjct: 39 AKREPEKAYAYVVWLLQLHETGD--GDIPAQPTIQANYAINTLITASQRCGKAMEAQRAFDLLGVHGFTPDVFAYTALIDVLGRGQQAEIGLAMYKQML----ATDVQPNIVTFTTIIRVLA-------------------------MSDTVDVSYVLNVLEHARLLDKTCDPSLYTEALETCAKRKAID----------------VITGVLQQ----------------RRLDYGLELLGDKSILAISRVAREPSNARIVDGWVADGLLDAADKTRLFLASSSSSVTDDKYQGCLGYETPASVRQSVILHDIDRLIERV------------------------------------LKGVLPTKM---DFETLIHQCRKRKWREQVHVVFDAMTTLA 333
BLAST of mRNA_P-wetherbeei_contig204.1.1 vs. uniprot
Match: A0A662Y620_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y620_9STRA) HSP 1 Score: 106 bits (264), Expect = 1.130e-20 Identity = 64/163 (39.26%), Postives = 93/163 (57.06%), Query Frame = 2
Query: 173 WAEDGIVRLLIIRLHAG-ENVETKAFLKPIFKFLQRGQTSQND-----VEMAFCYVSWLAQLADIGDPTRNLPPQPHLQPAYAFNTLVTCCQRGRRRESACRAYAEMLRRGYRPEFFVHTAMIDVLSRLGDPVAALQVYDWMKRSPEAAEVRPNVVTFATTIR 643
W +D + L+ +L G E ET+AFL+PIF++++ G + +E AF +V WL LA GD R +P P LQP+YA NT+VT QR A RA+ + GY P+ F +TA+IDV +R GD AA++ M+ S +PN+VT+ T +R
Sbjct: 12 WEDDDVAGPLVQKLLGGAETWETRAFLRPIFRWMKLGVHKDGNRDAEPIEKAFAFVEWLVLLATQGDAARGIPVLPLLQPSYALNTIVTASQRAGSAIDAQRAFNLLGHYGYEPDVFTYTALIDVTARNGDLPAAIEE---MRLSSS----KPNIVTYTTLVR 167
BLAST of mRNA_P-wetherbeei_contig204.1.1 vs. uniprot
Match: K3WMK1_GLOUD (3'-5' exonuclease domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WMK1_GLOUD) HSP 1 Score: 104 bits (259), Expect = 1.320e-18 Identity = 51/127 (40.16%), Postives = 77/127 (60.63%), Query Frame = 2
Query: 173 WAEDGIVRLLIIRLHAGENVETKAFLKPIFKFLQRGQTSQND-----VEMAFCYVSWLAQLADIGDPTRNLPPQPHLQPAYAFNTLVTCCQRGRRRESACRAYAEMLRRGYRPEFFVHTAMIDVLSR 538
W + R ++ +L +G+++ET+AFLKPIF++++ G D V+ AF + W+ QL IGD R +P LQP+YA NT+VT QR A RA+ + + GY P+ F HTA+IDV++R
Sbjct: 20 WEHEEPTRTIVHQLQSGQSLETRAFLKPIFRWMKHGIRKNGDKDTEMVDKAFAFAEWMVQLQTIGDAEREIPVLEKLQPSYALNTIVTASQRVGSMPDALRAFDLLNKHGYEPDVFTHTALIDVIAR 146
BLAST of mRNA_P-wetherbeei_contig204.1.1 vs. uniprot
Match: UPI0012AE94E6 (exonuclease mut-7 homolog isoform X2 n=2 Tax=Cercopithecinae TaxID=9528 RepID=UPI0012AE94E6) HSP 1 Score: 79.3 bits (194), Expect = 1.240e-11 Identity = 78/241 (32.37%), Postives = 98/241 (40.66%), Query Frame = 2
Query: 3920 VVGVDAEWQPYRTGQPPSKVALLQLACEGRVFLLDLLALQGSCNATAAGACRCSCTDGGDGGSCGDSTMWTPPTTAAAAATDGCWQTFVLDLFGHSGITKLGLRPAGDLRRLAQSYSGLAALAAPPLAEPPSAPTAAXAAVAGPAAARWLDMASEYSAWLGPASGKGSRGXXXXXXXXXXXFGKHAAAASIGLAEVVATVLRRRLDKRMQASDWGRRPLTSDQLMYAALDAYCLLLVHERM 4642
VVGVD EW P + +LLQ+A EGRVFLLD+LAL PPT A A + V L ITKLG GDL++L S LA + L V R + +A+ ++ G KG R GL+ +V VL LDK Q S+W RRPL +QL+YAA DAYCLL VH+ +
Sbjct: 136 VVGVDLEWTPVFVAGGRPRPSLLQVAVEGRVFLLDVLALS------------------------------QPPTGQGAQA----FSRLVAQLLSDPSITKLGYGMVGDLQKLGASCPALAHVEKQILG-----------GVDLLLVHRQMRVANMPTS--GTDRAKGLR----------------------GLSLLVQQVLGTALDKTQQLSNWDRRPLCEEQLIYAAADAYCLLEVHQAL 307
BLAST of mRNA_P-wetherbeei_contig204.1.1 vs. uniprot
Match: UPI0012AD9438 (exonuclease mut-7 homolog isoform X1 n=1 Tax=Papio anubis TaxID=9555 RepID=UPI0012AD9438) HSP 1 Score: 79.3 bits (194), Expect = 1.560e-11 Identity = 78/241 (32.37%), Postives = 98/241 (40.66%), Query Frame = 2
Query: 3920 VVGVDAEWQPYRTGQPPSKVALLQLACEGRVFLLDLLALQGSCNATAAGACRCSCTDGGDGGSCGDSTMWTPPTTAAAAATDGCWQTFVLDLFGHSGITKLGLRPAGDLRRLAQSYSGLAALAAPPLAEPPSAPTAAXAAVAGPAAARWLDMASEYSAWLGPASGKGSRGXXXXXXXXXXXFGKHAAAASIGLAEVVATVLRRRLDKRMQASDWGRRPLTSDQLMYAALDAYCLLLVHERM 4642
VVGVD EW P + +LLQ+A EGRVFLLD+LAL PPT A A + V L ITKLG GDL++L S LA + L V R + +A+ ++ G KG R GL+ +V VL LDK Q S+W RRPL +QL+YAA DAYCLL VH+ +
Sbjct: 163 VVGVDLEWTPVFVAGGRPRPSLLQVAVEGRVFLLDVLALS------------------------------QPPTGQGAQA----FSRLVAQLLSDPSITKLGYGMVGDLQKLGASCPALAHVEKQILG-----------GVDLLLVHRQMRVANMPTS--GTDRAKGLR----------------------GLSLLVQQVLGTALDKTQQLSNWDRRPLCEEQLIYAAADAYCLLEVHQAL 334
BLAST of mRNA_P-wetherbeei_contig204.1.1 vs. uniprot
Match: A0A8C9HJY9_9PRIM (Exonuclease 3'-5' domain containing 3 n=3 Tax=Piliocolobus tephrosceles TaxID=591936 RepID=A0A8C9HJY9_9PRIM) HSP 1 Score: 80.9 bits (198), Expect = 1.750e-11 Identity = 77/242 (31.82%), Postives = 97/242 (40.08%), Query Frame = 2
Query: 3920 VVGVDAEWQPYRTGQPPSKVALLQLACEGRVFLLDLLALQGSCNATAAGACRCSCTDGGDGGSCGDSTMWTPPTTAAAAATDGCWQTFVLDLFGHSGITKLGLRPAGDLRRLAQSYSGLAALAAPPLAEPPSAPTAAXAAVAGPAAARWLDMASEYSAWLGPASG-KGSRGXXXXXXXXXXXFGKHAAAASIGLAEVVATVLRRRLDKRMQASDWGRRPLTSDQLMYAALDAYCLLLVHERM 4642
VVGVD EW P + +LLQ+A EGRVFLLD+LAL PPT A A + V L + ITKLG GDL++L S LA + L L + + P +G G+RG GL+ +V VL LDK Q S+W RRPL +QL+YAA DAYCLL VH+ +
Sbjct: 447 VVGVDLEWTPVFVAGGRPRPSLLQVAVEGRVFLLDVLALS------------------------------QPPTGQGAQA----FSRLVAQLLSDASITKLGYGMVGDLQKLGTSCPALAHVEKQILG-----------------GVDLLLVHRQMRVANMPTTGVDGARGLR-------------------GLSLLVQQVLGTALDKTQQLSNWDRRPLCEEQLIYAAADAYCLLEVHQAL 618
BLAST of mRNA_P-wetherbeei_contig204.1.1 vs. uniprot
Match: UPI000E6AE97D (exonuclease mut-7 homolog isoform X1 n=3 Tax=Piliocolobus tephrosceles TaxID=591936 RepID=UPI000E6AE97D) HSP 1 Score: 80.9 bits (198), Expect = 1.800e-11 Identity = 77/242 (31.82%), Postives = 97/242 (40.08%), Query Frame = 2
Query: 3920 VVGVDAEWQPYRTGQPPSKVALLQLACEGRVFLLDLLALQGSCNATAAGACRCSCTDGGDGGSCGDSTMWTPPTTAAAAATDGCWQTFVLDLFGHSGITKLGLRPAGDLRRLAQSYSGLAALAAPPLAEPPSAPTAAXAAVAGPAAARWLDMASEYSAWLGPASG-KGSRGXXXXXXXXXXXFGKHAAAASIGLAEVVATVLRRRLDKRMQASDWGRRPLTSDQLMYAALDAYCLLLVHERM 4642
VVGVD EW P + +LLQ+A EGRVFLLD+LAL PPT A A + V L + ITKLG GDL++L S LA + L L + + P +G G+RG GL+ +V VL LDK Q S+W RRPL +QL+YAA DAYCLL VH+ +
Sbjct: 435 VVGVDLEWTPVFVAGGRPRPSLLQVAVEGRVFLLDVLALS------------------------------QPPTGQGAQA----FSRLVAQLLSDASITKLGYGMVGDLQKLGTSCPALAHVEKQILG-----------------GVDLLLVHRQMRVANMPTTGVDGARGLR-------------------GLSLLVQQVLGTALDKTQQLSNWDRRPLCEEQLIYAAADAYCLLEVHQAL 606 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig204.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig204.1.1 >prot_P-wetherbeei_contig204.1.1 ID=prot_P-wetherbeei_contig204.1.1|Name=mRNA_P-wetherbeei_contig204.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=1556bp MAGDPTTLVDLERLTSSRAAAEERCPFVGGEWAEDGIVRLLIIRLHAGENback to top mRNA from alignment at P-wetherbeei_contig204:292..6039- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig204.1.1 ID=mRNA_P-wetherbeei_contig204.1.1|Name=mRNA_P-wetherbeei_contig204.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=5748bp|location=Sequence derived from alignment at P-wetherbeei_contig204:292..6039- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig204:292..6039- >mRNA_P-wetherbeei_contig204.1.1 ID=mRNA_P-wetherbeei_contig204.1.1|Name=mRNA_P-wetherbeei_contig204.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=4668bp|location=Sequence derived from alignment at P-wetherbeei_contig204:292..6039- (Phaeothamnion wetherbeei SAG_119_79)back to top |