mRNA_P-wetherbeei_contig20367.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20367.1.1
Unique NamemRNA_P-wetherbeei_contig20367.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig20367.1.1 vs. uniprot
Match: D8LAZ9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LAZ9_ECTSI)

HSP 1 Score: 232 bits (591), Expect = 6.870e-73
Identity = 115/140 (82.14%), Postives = 125/140 (89.29%), Query Frame = 1 
Query:    4 GLFKESTMRLIPAFEASPKGYADLYQTVLIDTPVGPYFSQFLSEQQENWGNAATVVVRNVLEEVEIEIIKNSLMKLYLEDFYHFCAGVGGDTAGVMCELLAARADRNAINITLNSFGGPLNEPHMRSTDRRRLYPSIGMV 423
            GLFK+STMRLIPAFEASPKGYADLYQTVL+DTP+GPYFSQFL +QQE   NAA V  R++LEEVEIEIIKNSLMKLYLEDF+ FC  VGGDT+ VMCELL ARADR AINITLNSFGGPLNEP MRSTDRRRLYP+IG +
Sbjct:  140 GLFKDSTMRLIPAFEASPKGYADLYQTVLVDTPIGPYFSQFLEQQQERLTNAAQV--RDILEEVEIEIIKNSLMKLYLEDFHRFCKSVGGDTSTVMCELLEARADRGAINITLNSFGGPLNEPSMRSTDRRRLYPAIGTL 277
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BLAST of mRNA_P-wetherbeei_contig20367.1.1 vs. uniprot
Match: A0A836CAY8_9STRA (V0 complex, c/d subunit of ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAY8_9STRA)

HSP 1 Score: 218 bits (554), Expect = 2.910e-67
Identity = 109/144 (75.69%), Postives = 121/144 (84.03%), Query Frame = 1 
Query:    4 GLFKESTMRLIPAFEASPKGYADLYQTVLIDTPVGPYFSQFLSEQQENWGNAATV----VVRNVLEEVEIEIIKNSLMKLYLEDFYHFCAGVGGDTAGVMCELLAARADRNAINITLNSFGGPLNEPHMRSTDRRRLYPSIGMV 423
            GLF  +TM+LIP FEASPKGYADLYQTVLIDTP+G YFS+FL E +    +AA      +VR+VLEEVEIEIIKNSLMKLYLEDFY FC  +GGDTA VMC LL ARADRNAINITLNSFGGPLNEPHMR+TDRRRLYP+IG +
Sbjct:  138 GLFAPATMKLIPLFEASPKGYADLYQTVLIDTPIGDYFSRFLEEHKPTGQDAAGAENAGMVRHVLEEVEIEIIKNSLMKLYLEDFYRFCEKIGGDTAEVMCALLGARADRNAINITLNSFGGPLNEPHMRTTDRRRLYPAIGTL 281
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BLAST of mRNA_P-wetherbeei_contig20367.1.1 vs. uniprot
Match: F0XZC2_AURAN (V-type proton ATPase subunit n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZC2_AURAN)

HSP 1 Score: 211 bits (538), Expect = 4.350e-65
Identity = 105/140 (75.00%), Postives = 119/140 (85.00%), Query Frame = 1 
Query:    4 GLFKESTMRLIPAFEASPKGYADLYQTVLIDTPVGPYFSQFLSEQQENWGNAATVVVRNVLEEVEIEIIKNSLMKLYLEDFYHFCAGVGGDTAGVMCELLAARADRNAINITLNSFGGPLNEPHMRSTDRRRLYPSIGMV 423
            G+F++STMR IP FE SPKGYADLYQTVL+DTPVGPYFS+FL E  E   +AA V  RNVLEEVE+EIIK+SLMKLYLEDFY+FC  VGGDTA +M E+L ARAD+ AINITLNSFG PLNEP MRSTDR+RLYPSIG +
Sbjct:  130 GMFRDSTMRSIPTFENSPKGYADLYQTVLVDTPVGPYFSRFLQESSEKLTSAAEV--RNVLEEVEMEIIKHSLMKLYLEDFYYFCCSVGGDTAEIMGEILKARADQRAINITLNSFGTPLNEPSMRSTDRKRLYPSIGFL 267
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BLAST of mRNA_P-wetherbeei_contig20367.1.1 vs. uniprot
Match: A0A7S3ZVT8_9STRA (V-type proton ATPase subunit n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZVT8_9STRA)

HSP 1 Score: 204 bits (519), Expect = 3.130e-62
Identity = 102/140 (72.86%), Postives = 118/140 (84.29%), Query Frame = 1 
Query:    4 GLFKESTMRLIPAFEASPKGYADLYQTVLIDTPVGPYFSQFLSEQQENWGNAATVVVRNVLEEVEIEIIKNSLMKLYLEDFYHFCAGVGGDTAGVMCELLAARADRNAINITLNSFGGPLNEPHMRSTDRRRLYPSIGMV 423
            GLF++STMR IPAFE SPKGYADLYQ VL+DTPVGPYFSQFL+E  E  G+A+ V  R+VLEEVE+EI+K+SLMKLYLEDF  FC  +GGDTA VM E+L ARAD+ AIN+TLNSFG PLNEP MRS +RRRLYPSIG +
Sbjct:  131 GLFRDSTMRSIPAFENSPKGYADLYQLVLVDTPVGPYFSQFLAESAERIGSASEV--RHVLEEVELEIVKHSLMKLYLEDFAAFCQSIGGDTAEVMGEILNARADQRAINVTLNSFGTPLNEPQMRSRERRRLYPSIGFL 268
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BLAST of mRNA_P-wetherbeei_contig20367.1.1 vs. uniprot
Match: A0A7S3NM61_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3NM61_9STRA)

HSP 1 Score: 197 bits (502), Expect = 1.500e-60
Identity = 97/140 (69.29%), Postives = 114/140 (81.43%), Query Frame = 1 
Query:    4 GLFKESTMRLIPAFEASPKGYADLYQTVLIDTPVGPYFSQFLSEQQENWGNAATVVVRNVLEEVEIEIIKNSLMKLYLEDFYHFCAGVGGDTAGVMCELLAARADRNAINITLNSFGGPLNEPHMRSTDRRRLYPSIGMV 423
            GLF+E+TMR IP FE SPKGYADLYQTVL+DTP+G YF+QFL+E  E  G A  +  RNVLEEV +EIIKNSL+KLYLEDF+  C  +GG+TA +M E+L ARAD+ AINITLNSFG PLNEP MR TDR+RLYPSIG +
Sbjct:   56 GLFQEATMRSIPTFEHSPKGYADLYQTVLVDTPIGSYFAQFLAESSETIGTAGEM--RNVLEEVSMEIIKNSLVKLYLEDFFKLCQKIGGETAQIMGEILQARADQRAINITLNSFGTPLNEPSMRQTDRKRLYPSIGFL 193
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BLAST of mRNA_P-wetherbeei_contig20367.1.1 vs. uniprot
Match: A0A7S3HJ59_9STRA (V-type proton ATPase subunit n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3HJ59_9STRA)

HSP 1 Score: 196 bits (499), Expect = 3.570e-59
Identity = 95/140 (67.86%), Postives = 115/140 (82.14%), Query Frame = 1 
Query:    4 GLFKESTMRLIPAFEASPKGYADLYQTVLIDTPVGPYFSQFLSEQQENWGNAATVVVRNVLEEVEIEIIKNSLMKLYLEDFYHFCAGVGGDTAGVMCELLAARADRNAINITLNSFGGPLNEPHMRSTDRRRLYPSIGMV 423
            G+FKESTMR IP+FEASP+GYA+LY+TVL+DTPVG YF ++L +       A+ V  RN+LEEV+IEI+KNSLMKLYLEDFY FC  +GG+TA +MC LL+ARADRNAINITLNSFG PLN+P MR T R+ LYPSIG +
Sbjct:  135 GMFKESTMRNIPSFEASPRGYAELYETVLVDTPVGVYFQRYLDQSASRVSAASEV--RNILEEVQIEILKNSLMKLYLEDFYDFCENLGGETAEIMCGLLSARADRNAINITLNSFGTPLNDPAMRETHRKNLYPSIGAL 272
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BLAST of mRNA_P-wetherbeei_contig20367.1.1 vs. uniprot
Match: A0A1E7FHA0_9STRA (V-type proton ATPase subunit n=3 Tax=Bacillariaceae TaxID=33852 RepID=A0A1E7FHA0_9STRA)

HSP 1 Score: 192 bits (489), Expect = 1.130e-57
Identity = 92/140 (65.71%), Postives = 114/140 (81.43%), Query Frame = 1 
Query:    4 GLFKESTMRLIPAFEASPKGYADLYQTVLIDTPVGPYFSQFLSEQQENWGNAATVVVRNVLEEVEIEIIKNSLMKLYLEDFYHFCAGVGGDTAGVMCELLAARADRNAINITLNSFGGPLNEPHMRSTDRRRLYPSIGMV 423
            G+FK+STMR IP FE S KGY+DLY TVL+DTPVGPYFS+FL E   + G ++    RNVLEEVEIEIIK+SL+K +LEDFY+FC  +GGDT  +MC++L  RAD NAINITLNSFG PLNEP MR++DR+RLYP++G +
Sbjct:  139 GMFKDSTMRSIPTFENSAKGYSDLYTTVLVDTPVGPYFSKFLQESSVHRGTSS----RNVLEEVEIEIIKSSLIKFWLEDFYNFCYSMGGDTGEIMCDILKVRADTNAINITLNSFGTPLNEPGMRTSDRKRLYPAVGYL 274
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BLAST of mRNA_P-wetherbeei_contig20367.1.1 vs. uniprot
Match: A0A7S2CIC4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CIC4_9STRA)

HSP 1 Score: 190 bits (482), Expect = 1.580e-56
Identity = 96/144 (66.67%), Postives = 115/144 (79.86%), Query Frame = 1 
Query:    4 GLFKESTMRLIPAFEASPKGYADLYQTVLIDTPVGPYFSQFLSEQQENWGNAATVVVRNVLEEVEIEIIKNSLMKLYLEDFYHFCAGVGGDTAGVMCELLAARADRNAINITLNSFGGPLNEPHMRSTD----RRRLYPSIGMV 423
            G+FKESTMRL  AF+ SPKGY+DLYQTVL++TPVG YFS+ L+++     NA  V  RNVLEEVEIEI+KNSLMKLYLEDFY+FC  +GG+TA +MCELL A++D+ AINITLNSFG PLNEP MR  D    R+ LYPSIG +
Sbjct:  138 GMFKESTMRLCTAFDNSPKGYSDLYQTVLVETPVGKYFSEILAQKSAMLENAGEV--RNVLEEVEIEILKNSLMKLYLEDFYYFCQEIGGETAPLMCELLKAKSDQRAINITLNSFGTPLNEPSMRDGDGWPTRKSLYPSIGFL 279
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BLAST of mRNA_P-wetherbeei_contig20367.1.1 vs. uniprot
Match: B5Y3H8_PHATC (V-type proton ATPase subunit n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B5Y3H8_PHATC)

HSP 1 Score: 189 bits (481), Expect = 1.970e-56
Identity = 95/138 (68.84%), Postives = 110/138 (79.71%), Query Frame = 1 
Query:    4 GLFKESTMRLIPAFEASPKGYADLYQTVLIDTPVGPYFSQFLSEQQENWGNAATVVVRNVLEEVEIEIIKNSLMKLYLEDFYHFCAGVGGDTAGVMCELLAARADRNAINITLNSFGGPLNEPHMRSTDRRRLYPSIG 417
            G+FKESTMR IP FE S +GYADLYQTVL+DTPVGPYF+ FL E  E+    +    RNVLEEVEIEIIK+SL+K +LEDFY F   +GGDT+ +M ELL  RAD NAINITLNSFG PLNEP MRS+DR+RLYPS+G
Sbjct:  139 GMFKESTMRSIPTFENSSRGYADLYQTVLVDTPVGPYFAMFLQESSEHRDGDS----RNVLEEVEIEIIKSSLIKYWLEDFYQFAMKIGGDTSQIMGELLKVRADTNAINITLNSFGTPLNEPSMRSSDRKRLYPSVG 272
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BLAST of mRNA_P-wetherbeei_contig20367.1.1 vs. uniprot
Match: A0A7S3QEL7_9STRA (V-type proton ATPase subunit n=2 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3QEL7_9STRA)

HSP 1 Score: 188 bits (478), Expect = 5.140e-56
Identity = 93/138 (67.39%), Postives = 110/138 (79.71%), Query Frame = 1 
Query:    4 GLFKESTMRLIPAFEASPKGYADLYQTVLIDTPVGPYFSQFLSEQQENWGNAATVVVRNVLEEVEIEIIKNSLMKLYLEDFYHFCAGVGGDTAGVMCELLAARADRNAINITLNSFGGPLNEPHMRSTDRRRLYPSIG 417
            G+FKESTMR IP FE + KG+ADLYQTVL+DTPVGPYF+ FL E   + G      VRNV+EEVEIEIIK+SLMK ++EDF  +C  +GGDTA +M ELL  RAD NAINITLNSFG PLNEP MRS+DR+RLYP++G
Sbjct:  137 GMFKESTMRSIPTFEPNAKGFADLYQTVLVDTPVGPYFAMFLQEHSNSLGGE----VRNVIEEVEIEIIKSSLMKYWMEDFAQYCNKLGGDTAEIMGELLKTRADTNAINITLNSFGTPLNEPAMRSSDRKRLYPAVG 270
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20367.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LAZ9_ECTSI6.870e-7382.14Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A836CAY8_9STRA2.910e-6775.69V0 complex, c/d subunit of ATPase n=1 Tax=Tribonem... [more]
F0XZC2_AURAN4.350e-6575.00V-type proton ATPase subunit n=1 Tax=Aureococcus a... [more]
A0A7S3ZVT8_9STRA3.130e-6272.86V-type proton ATPase subunit n=1 Tax=Pelagomonas c... [more]
A0A7S3NM61_9STRA1.500e-6069.29Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
A0A7S3HJ59_9STRA3.570e-5967.86V-type proton ATPase subunit n=1 Tax=Spumella elon... [more]
A0A1E7FHA0_9STRA1.130e-5765.71V-type proton ATPase subunit n=3 Tax=Bacillariacea... [more]
A0A7S2CIC4_9STRA1.580e-5666.67Hypothetical protein (Fragment) n=2 Tax=Florenciel... [more]
B5Y3H8_PHATC1.970e-5668.84V-type proton ATPase subunit n=1 Tax=Phaeodactylum... [more]
A0A7S3QEL7_9STRA5.140e-5667.39V-type proton ATPase subunit n=2 Tax=Chaetoceros d... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20367contigP-wetherbeei_contig20367:80..1094 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D8LAZ9
Preferred nameATP6V0D2
PFAMsvATP-synt_AC39
Model size432
Max annot lvl2759|Eukaryota
KEGG koko:K02146,ko:K18164
KEGG TC3.A.2.2
KEGG Pathwayko00190,ko01100,ko04142,ko04145,ko04714,ko04721,ko04966,ko05110,ko05120,ko05152,ko05203,ko05323,map00190,map01100,map04142,map04145,map04714,map04721,map04966,map05110,map05120,map05152,map05203,map05323
KEGG ModuleM00160
Hectar predicted targeting categoryother localisation
GOsGO:0000041,GO:0000220,GO:0000322,GO:0000323,GO:0000324,GO:0000325,GO:0000329,GO:0000331,GO:0001654,GO:0001655,GO:0001763,GO:0001822,GO:0001947,GO:0002009,GO:0003002,GO:0003007,GO:0003143,GO:0003406,GO:0003674,GO:0003824,GO:0005215,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005764,GO:0005765,GO:0005768,GO:0005769,GO:0005773,GO:0005774,GO:0005794,GO:0005886,GO:0005911,GO:0006810,GO:0006811,GO:0006812,GO:0006826,GO:0006873,GO:0006875,GO:0006879,GO:0006885,GO:0006950,GO:0006986,GO:0006996,GO:0007034,GO:0007035,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007368,GO:0007389,GO:0007399,GO:0007423,GO:0007424,GO:0007430,GO:0007507,GO:0008021,GO:0008057,GO:0008104,GO:0008150,GO:0008286,GO:0008324,GO:0008544,GO:0008553,GO:0008593,GO:0009506,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009790,GO:0009798,GO:0009799,GO:0009855,GO:0009887,GO:0009888,GO:0009894,GO:0009913,GO:0009966,GO:0009987,GO:0010008,GO:0010033,GO:0010035,GO:0010038,GO:0010243,GO:0010506,GO:0010646,GO:0012505,GO:0012506,GO:0015031,GO:0015075,GO:0015077,GO:0015078,GO:0015318,GO:0015399,GO:0015405,GO:0015662,GO:0015672,GO:0015682,GO:0015833,GO:0015988,GO:0015991,GO:0016020,GO:0016021,GO:0016043,GO:0016050,GO:0016241,GO:0016324,GO:0016462,GO:0016469,GO:0016471,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017111,GO:0019222,GO:0019725,GO:0019829,GO:0022008,GO:0022607,GO:0022804,GO:0022853,GO:0022857,GO:0022890,GO:0023051,GO:0023052,GO:0030001,GO:0030003,GO:0030004,GO:0030030,GO:0030031,GO:0030054,GO:0030133,GO:0030139,GO:0030154,GO:0030182,GO:0030424,GO:0030641,GO:0030659,GO:0030666,GO:0030670,GO:0030855,GO:0030968,GO:0031090,GO:0031164,GO:0031224,GO:0031323,GO:0031329,GO:0031410,GO:0031982,GO:0032009,GO:0032438,GO:0032501,GO:0032502,GO:0032868,GO:0032869,GO:0032870,GO:0032991,GO:0033036,GO:0033059,GO:0033176,GO:0033177,GO:0033179,GO:0033181,GO:0033267,GO:0033554,GO:0033572,GO:0034220,GO:0034620,GO:0034976,GO:0035050,GO:0035239,GO:0035295,GO:0035315,GO:0035675,GO:0035966,GO:0035967,GO:0036295,GO:0036296,GO:0036442,GO:0036498,GO:0039022,GO:0042221,GO:0042490,GO:0042592,GO:0042623,GO:0042625,GO:0042626,GO:0042886,GO:0042995,GO:0043005,GO:0043010,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043434,GO:0043473,GO:0043492,GO:0043679,GO:0044085,GO:0044306,GO:0044422,GO:0044424,GO:0044425,GO:0044433,GO:0044437,GO:0044440,GO:0044444,GO:0044446,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0044769,GO:0044782,GO:0044877,GO:0045177,GO:0045184,GO:0045202,GO:0045335,GO:0045851,GO:0046688,GO:0046916,GO:0046961,GO:0048468,GO:0048513,GO:0048562,GO:0048568,GO:0048583,GO:0048598,GO:0048666,GO:0048699,GO:0048729,GO:0048731,GO:0048753,GO:0048754,GO:0048793,GO:0048856,GO:0048869,GO:0048878,GO:0048880,GO:0048882,GO:0048884,GO:0048886,GO:0048925,GO:0050789,GO:0050794,GO:0050801,GO:0050896,GO:0051179,GO:0051234,GO:0051452,GO:0051453,GO:0051716,GO:0055044,GO:0055065,GO:0055067,GO:0055072,GO:0055076,GO:0055080,GO:0055082,GO:0055085,GO:0060041,GO:0060271,GO:0060429,GO:0060446,GO:0060541,GO:0060562,GO:0060972,GO:0061138,GO:0061371,GO:0065007,GO:0065008,GO:0070382,GO:0070482,GO:0070887,GO:0070925,GO:0070986,GO:0071310,GO:0071375,GO:0071417,GO:0071453,GO:0071495,GO:0071702,GO:0071705,GO:0071840,GO:0071944,GO:0072001,GO:0072073,GO:0072176,GO:0072359,GO:0072512,GO:0090662,GO:0097458,GO:0097708,GO:0098588,GO:0098590,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0098793,GO:0098796,GO:0098797,GO:0098805,GO:0098852,GO:0099131,GO:0099132,GO:0099503,GO:0120025,GO:0120031,GO:0120036,GO:0120038,GO:0150034,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902600
Exons3
Evalue5.37e-69
EggNOG OGsCOG1527@1|root,KOG2957@2759|Eukaryota
Descriptionproton-exporting ATPase activity, phosphorylative mechanism
Cds size408
COG categoryC
BiGG ReactioniMM904.YLR447C,iND750.YLR447C
BRITEko00000,ko00001,ko00002,ko03029
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186197.7082853-UTR-P-wetherbeei_contig20367:79..1031683186197.7082853-UTR-P-wetherbeei_contig20367:79..103Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig20367 80..103 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186197.7247422-CDS-P-wetherbeei_contig20367:103..2201683186197.7247422-CDS-P-wetherbeei_contig20367:103..220Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20367 104..220 +
1683186197.7405941-CDS-P-wetherbeei_contig20367:472..5591683186197.7405941-CDS-P-wetherbeei_contig20367:472..559Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20367 473..559 +
1683186197.753086-CDS-P-wetherbeei_contig20367:890..10941683186197.753086-CDS-P-wetherbeei_contig20367:890..1094Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20367 891..1094 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20367.1.1prot_P-wetherbeei_contig20367.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20367 104..1094 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20367.1.1

>prot_P-wetherbeei_contig20367.1.1 ID=prot_P-wetherbeei_contig20367.1.1|Name=mRNA_P-wetherbeei_contig20367.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=136bp
MRLIPAFEASPKGYADLYQTVLIDTPVGPYFSQFLSEQQENWGNAATVVV
RNVLEEVEIEIIKNSLMKLYLEDFYHFCAGVGGDTAGVMCELLAARADRN
AINITLNSFGGPLNEPHMRSTDRRRLYPSIGMVRL*
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mRNA from alignment at P-wetherbeei_contig20367:80..1094+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20367.1.1 ID=mRNA_P-wetherbeei_contig20367.1.1|Name=mRNA_P-wetherbeei_contig20367.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1015bp|location=Sequence derived from alignment at P-wetherbeei_contig20367:80..1094+ (Phaeothamnion wetherbeei SAG_119_79)
CAGGGCCTGTTCAAGGAGTCCACGATGCGGCTTATCCCGGCATTCGAGGC
ATCGCCGAAAGGCTATGCCGACCTCTACCAGACGGTGCTCATCGACACGC
CCGTCGGGCCCTACTTCAGCCAGTTCCTCTCCGAACAGCAGGTGAAGCGA
GAGACCTGCCTGTTTACGGACAAATGGCTTTGTCGAGAAGGACCAGACAG
CAGGGAATGGTAGACCAGCGCTTTTGGCTGCCGGTGGGACGAAACTGTGT
AAGCTGCGGCCGCCGGCAAGGGCGGGCTGATGCATGCATGCTTGTTTTTC
TGCCGTTCTCCGTTTTGTTCGCTCCTATGCAGTGCCCTTTTGTGCGGTCT
GACCTTTCGGTTGTCCAATTTCGTGCTTCTCCGTCTGCGGCAGGAGAACT
GGGGAAACGCGGCGACGGTGGTGGTGCGCAACGTGCTTGAGGAGGTGGAG
ATTGAAATAATCAAGAACTCACTCATGAAGGTACGTACGAAAGAAAGTTC
CTGGAAGGTCTCCCACTCAGTCCTGGAGGGGAGAGGAGTGTGTGCTCGCG
GCTGTTCTATCCCCTTTCTGTACCGCGGTTGACTCGCACGGCCAGCCGCT
GTACGCTATCCTCGCCCCGGCTGCTGCCTGCGACCTGCTGTGTTTTGCCC
CACCGTTCCGTCTGCTGCGGCCTGCTGTCTTACACTGCCGCCGCTGCTTC
GTCGCCGGCGCCGCTGTTACCCACCACCGCTTGCTGCTGTCCTGCGCTGC
CGCCGTCGCCGCCAAAATGTACTGATCGGCCCTTCCGAAACCCCTCTCAA
TCCGCTTCCAGCTATACCTGGAGGACTTCTACCACTTCTGTGCGGGCGTC
GGCGGCGACACTGCGGGCGTCATGTGCGAGCTGTTGGCGGCGCGCGCCGA
CCGCAACGCCATCAATATCACGCTCAACTCGTTCGGCGGGCCGCTCAACG
AGCCGCATATGCGGTCGACGGACCGCCGCCGCCTCTACCCATCCATCGGC
ATGGTGCGACTCTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20367:80..1094+

>mRNA_P-wetherbeei_contig20367.1.1 ID=mRNA_P-wetherbeei_contig20367.1.1|Name=mRNA_P-wetherbeei_contig20367.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=408bp|location=Sequence derived from alignment at P-wetherbeei_contig20367:80..1094+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCGGCTTATCCCGGCATTCGAGGCATCGCCGAAAGGCTATGCCGACCT
CTACCAGACGGTGCTCATCGACACGCCCGTCGGGCCCTACTTCAGCCAGT
TCCTCTCCGAACAGCAGGAGAACTGGGGAAACGCGGCGACGGTGGTGGTG
CGCAACGTGCTTGAGGAGGTGGAGATTGAAATAATCAAGAACTCACTCAT
GAAGCTATACCTGGAGGACTTCTACCACTTCTGTGCGGGCGTCGGCGGCG
ACACTGCGGGCGTCATGTGCGAGCTGTTGGCGGCGCGCGCCGACCGCAAC
GCCATCAATATCACGCTCAACTCGTTCGGCGGGCCGCTCAACGAGCCGCA
TATGCGGTCGACGGACCGCCGCCGCCTCTACCCATCCATCGGCATGGTGC
GACTCTGA
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