mRNA_P-wetherbeei_contig20361.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20361.2.1
Unique NamemRNA_P-wetherbeei_contig20361.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20361.2.1 vs. uniprot
Match: A0A5Q2RK18_9ACTN (Guanylate cyclase domain-containing protein n=1 Tax=Actinomarinicola tropica TaxID=2789776 RepID=A0A5Q2RK18_9ACTN)

HSP 1 Score: 160 bits (405), Expect = 1.460e-46
Identity = 88/171 (51.46%), Postives = 109/171 (63.74%), Query Frame = 1
Query:   40 VSGTLVFTDLAGFTAFTAERGDDAALALVERFESIVTELLPDDARVVKQLGDGLFLYVPNAHEAVSAAWAFSERCANESTSDAPLWVRTGVHVGTAIARGTDLIGHDVNIASRITALAAPSEVLASDATRRAVEHELLDAPGACLDVLFETVGPVFVKGIDDPIRLSRVLP 552
            V GT+VFTD+ GFTAFTA+ GDD AL L+   E  V  LLPD ARVVK+LGDGL L+ P+   A++ A A     A+      PLW+R G H GT   R  DL+GHDVN+A+RI  LA P E+L S+ATRRA+        G  +DV F  VGPVFVKG+ DP+ +  V P
Sbjct:   10 VVGTVVFTDIVGFTAFTADEGDDRALELLAVQERAVERLLPDGARVVKELGDGLMLWFPDPVGAITTALALHATLADHDLDGFPLWIRAGAHHGTQRRRRDDLLGHDVNVAARIVDLAGPGELLVSEATRRAIG-------GGLVDVEFREVGPVFVKGLADPVWIHHVEP 173          
BLAST of mRNA_P-wetherbeei_contig20361.2.1 vs. uniprot
Match: A0A1F8RUR4_9CHLR (Guanylate cyclase domain-containing protein n=1 Tax=Chloroflexi bacterium RBG_16_68_14 TaxID=1797660 RepID=A0A1F8RUR4_9CHLR)

HSP 1 Score: 159 bits (401), Expect = 4.100e-46
Identity = 85/169 (50.30%), Postives = 112/169 (66.27%), Query Frame = 1
Query:   46 GTLVFTDLAGFTAFTAERGDDAALALVERFESIVTELLPDDARVVKQLGDGLFLYVPNAHEAVSAAWAFSERCANEST-SDAPLWVRTGVHVGTAIARGTDLIGHDVNIASRITALAAPSEVLASDATRRAVEHELLDAPGACLDVLFETVGPVFVKGIDDPIRLSRVL 549
            GT+VFTD+ GFT +TA RGD+ AL L+   E +V E+LP +AR+VK+LGDGL L+ P+A +A+ A     ER   ES+ S  PLWVR G+H G    RG DL+GHDVN+ASR+  +A P EVL SDAT   ++  L D       V FE +GPV +KG+ DP+RL R +
Sbjct:   16 GTVVFTDIVGFTEYTALRGDEEALGLLAAQERLVQEVLPPEARIVKELGDGLLLWFPDACQALEATLRLQERFEEESSESMLPLWVRVGMHSGRQTRRGDDLVGHDVNVASRVVDVAGPGEVLLSDATLAQIDDRLPD-------VAFEELGPVVMKGLPDPVRLYRAM 177          
BLAST of mRNA_P-wetherbeei_contig20361.2.1 vs. uniprot
Match: A0A6G0A6N3_9ACTN (Adenylate/guanylate cyclase domain-containing protein n=2 Tax=Bacteria TaxID=2 RepID=A0A6G0A6N3_9ACTN)

HSP 1 Score: 152 bits (384), Expect = 1.200e-43
Identity = 85/173 (49.13%), Postives = 112/173 (64.74%), Query Frame = 1
Query:   40 VSGTLVFTDLAGFTAFTAERGDDAALALVERFESIVTELLPDDARVVKQLGDGLFLYVPNAHEAVSAAWAFSERCANESTSDA-PLWVRTGVHVGTAIARGTDLIGHDVNIASRITALAAPSEVLASDATRRAVEHELLDAPGACLD-VLFETVGPVFVKGIDDPIRLSRVLP 552
            ++GT+VFTD+ GFT FTAE+GD+ ALA+V   E +V E LP+ ARVVK+LGDGL ++  +   A+  +     R  +E+   A PLWVR G H G  +A   DL+G+DVN+A+RI A+AAP EVL S AT        LDA G  +D VLFE +GP  +KG+ DPI L R  P
Sbjct:    7 LNGTVVFTDIVGFTLFTAEQGDEHALAMVSTQEKLVREALPERARVVKELGDGLMIWFSDPSRAIGTSVELKVRFEDENAGGAFPLWVRMGAHHGRQLAHKDDLVGNDVNVAARIAAIAAPREVLVSQAT--------LDAAGGAVDGVLFEEIGPAIMKGLPDPIWLLRATP 171          
BLAST of mRNA_P-wetherbeei_contig20361.2.1 vs. uniprot
Match: A0A3A0FP94_9BACT (Adenylate/guanylate cyclase domain-containing protein n=2 Tax=Bacteria TaxID=2 RepID=A0A3A0FP94_9BACT)

HSP 1 Score: 145 bits (366), Expect = 6.880e-41
Identity = 86/172 (50.00%), Postives = 109/172 (63.37%), Query Frame = 1
Query:   37 TVSGTLVFTDLAGFTAFTAERGDDAALALVERFESIVTELLPDDARVVKQLGDGLFLYVPNAHEAVSAAWAFSERCANESTSD---APLWVRTGVHVGTAIARGTDLIGHDVNIASRITALAAPSEVLASDATRRAVEHELLDAPGACLDVLFETVGPVFVKGIDDPIRLSR 543
            TV+G  +FTD+ GFT +TA RGDD AL L+   E IV E LP+ ARVVK+LGDGL L+ P+A  AV+ A     +C  E  S+   APLWVR GVH G    R  D++GHDVNIASR+  +A P EV+ S+AT  A        PG    V FE +GPVF+KG+ + +RL R
Sbjct:   10 TVTGATMFTDIVGFTEYTALRGDDEALRLLALQEEIVREELPEGARVVKELGDGLLLWFPDAGAAVATAVRL--QCRFEQASEELEAPLWVRIGVHYGRQTVRRGDVLGHDVNIASRVVGIAGPGEVVVSEATVAAA------GPGLA-GVCFEEIGPVFMKGLPEAVRLYR 172          
BLAST of mRNA_P-wetherbeei_contig20361.2.1 vs. uniprot
Match: A0A6I1QKE8_9CHLR (Guanylate cyclase domain-containing protein n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A6I1QKE8_9CHLR)

HSP 1 Score: 145 bits (367), Expect = 8.510e-41
Identity = 86/171 (50.29%), Postives = 108/171 (63.16%), Query Frame = 1
Query:   40 VSGTLVFTDLAGFTAFTAERGDDAALALVERFESIVTELLPDDARVVKQLGDGLFLYVPNAHEAVSAAWAFSERCANESTSDA-PLWVRTGVHVGTAIARGTDLIGHDVNIASRITALAAPSEVLASDATRRAVEHELLDAPGACLDVLFETVGPVFVKGIDDPIRLSRVL 549
            V G +VFTD+ GFT +TA RGD+AALAL+   E +V E LP DARVVK+LGDGL L+  +A  A+        R   ES +   PLWVR G+H G  +ARG DLIGH VN+A+RI ++A P EV+ S  TR  V   L +       V FE +GPV +KGI DP+RL R L
Sbjct:   12 VRGAVVFTDIVGFTEYTAFRGDEAALALLALQERVVHETLPADARVVKELGDGLLLWFADACAALRCCLLLRYRFEEESDAMMMPLWVRIGMHFGQQVARGDDLIGHCVNVAARIVSIAGPGEVVLSADTRAEVASGLPE-------VSFEELGPVVMKGIPDPVRLFRAL 175          
BLAST of mRNA_P-wetherbeei_contig20361.2.1 vs. uniprot
Match: A0A521WUK3_9CHLR (Adenylate/guanylate cyclase domain-containing protein n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A521WUK3_9CHLR)

HSP 1 Score: 142 bits (357), Expect = 1.820e-39
Identity = 85/170 (50.00%), Postives = 102/170 (60.00%), Query Frame = 1
Query:   40 VSGTLVFTDLAGFTAFTAERGDDAALALVERFESIVTELLPDDARVVKQLGDGLFLYVPNAHEAVSAAWAFSERCANESTS-DAPLWVRTGVHVGTAIARGTDLIGHDVNIASRITALAAPSEVLASDATRRAVEHELLDAPGACLDVLFETVGPVFVKGIDDPIRLSRV 546
            V GT++FTD+ GFT F A RGD  A+ L+   E IV   L +D+R+VK+LGDGL L+  +   A+       ER   ES   DAPLWVR GVH G    RG DLIGHDVN+ASRI  LA   EVLAS+ T R  +  L D       V FE +GPV +KGI  PI L RV
Sbjct:   12 VEGTVMFTDIVGFTEFNALRGDAEAIELLALQERIVRSELAEDSRIVKELGDGLMLWFADPCAAIETGLRLQERFEEESLGIDAPLWVRIGVHAGRQTCRGDDLIGHDVNVASRIMNLANSGEVLASEQTVRRADDRLSD-------VDFEQLGPVVMKGIPTPINLYRV 174          
BLAST of mRNA_P-wetherbeei_contig20361.2.1 vs. uniprot
Match: A0A7V9BYL4_9ACTN (Adenylate/guanylate cyclase domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V9BYL4_9ACTN)

HSP 1 Score: 140 bits (352), Expect = 7.260e-39
Identity = 78/166 (46.99%), Postives = 100/166 (60.24%), Query Frame = 1
Query:   46 GTLVFTDLAGFTAFTAERGDDAALALVERFESIVTELLPDDARVVKQLGDGLFLYVPNAHEAVSAAWAFSERCANESTSDAPLWVRTGVHVGTAIARGTDLIGHDVNIASRITALAAPSEVLASDATRRAVEHELLDAPGACLDVLFETVGPVFVKGIDDPIRLSR 543
            G + FTD+ GFT FTAERGD  ALA ++  + IV + LP  ARVVK+LGDGL L+ P+A  A+        R    ++  APLWVR G+H G   ARG DLIG+DVN+A+RI  +A P E+L S       EH          DV FE +GPV +KGI +P+ L R
Sbjct:    6 GAIAFTDIVGFTEFTAERGDADALAALDLQDQIVRDTLPPGARVVKELGDGLMLWFPDAATALRTCLDLHHRLEEAASDTAPLWVRMGMHWGCPTARGDDLIGNDVNLAARIVDMAGPGELLVS-------EHVRAQITSGREDVRFEELGPVVMKGIPEPVGLFR 164          
BLAST of mRNA_P-wetherbeei_contig20361.2.1 vs. uniprot
Match: A0A539DUP9_9ACTN (Adenylate cyclase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A539DUP9_9ACTN)

HSP 1 Score: 138 bits (347), Expect = 6.220e-38
Identity = 78/169 (46.15%), Postives = 101/169 (59.76%), Query Frame = 1
Query:   43 SGTLVFTDLAGFTAFTAERGDDAALALVERFESIVTELLPDDARVVKQLGDGLFLYVPNAHEAVSAAWAFSERCANESTSDAPLWVRTGVHVGTAIARGTDLIGHDVNIASRITALAAPSEVLASDATRRAVEHELLDAPGACLDVLFETVGPVFVKGIDDPIRLSRVL 549
            SG +VFTD+ GFT  T   GDD AL LV+  + +V  LL   +RVVK+LGDG+ L+   A +A+SA+     R  +      P+WVR G H GT   RG DLIG DVN+ASRI A+AAP EV+ S A    +  E   A G  L   F ++G VFVKGI +P+ L R +
Sbjct:    6 SGAIVFTDIVGFTELTELHGDDVALKLVDAHDVVVRSLLGPGSRVVKELGDGMLLWFDRALDAISASLELQRRLHDTEVETLPMWVRVGAHFGTPRRRGPDLIGRDVNLASRIAAVAAPGEVVCSSAFVEQMGFESRSA-GDDLPATFASLGSVFVKGIAEPVPLYRAI 173          
BLAST of mRNA_P-wetherbeei_contig20361.2.1 vs. uniprot
Match: A0A536LRK6_9CHLR (Adenylate/guanylate cyclase domain-containing protein n=3 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A536LRK6_9CHLR)

HSP 1 Score: 137 bits (346), Expect = 1.560e-37
Identity = 78/172 (45.35%), Postives = 104/172 (60.47%), Query Frame = 1
Query:   37 TVSGTLVFTDLAGFTAFTAERGDDAALALVERFESIVTELLPDDARVVKQLGDGLFLYVPNAHEAVSAAWAFSERCANESTSD-APLWVRTGVHVGTAIARGTDLIGHDVNIASRITALAAPSEVLASDATRRAVEHELLDAPGACLDVLFETVGPVFVKGIDDPIRLSRVL 549
            T  G +VFTDLAGFT FTA +GD+AAL L+   + +V EL+    RVVK+LGDGL L+  +   A+  A    ER   +S  +  PLWVR GVH G    RG+DL+GHDVN+A+R+  LAAP EVL S+A    V   +         V FE +GP  +KGI +P+ + R +
Sbjct:   35 TAEGAIVFTDLAGFTEFTAIQGDEAALDLLGVQDQVVGELIEGRGRVVKELGDGLMLWFDDPCHAIETALELQERFDEQSAKENLPLWVRIGVHYGRPAKRGSDLVGHDVNVAARVADLAAPGEVLISEAAAERVAERMEG-------VWFEEMGPTVMKGIPEPVGIYRCV 199          
BLAST of mRNA_P-wetherbeei_contig20361.2.1 vs. uniprot
Match: A0A535DP98_9CHLR (Adenylate/guanylate cyclase domain-containing protein (Fragment) n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535DP98_9CHLR)

HSP 1 Score: 127 bits (319), Expect = 3.120e-34
Identity = 73/136 (53.68%), Postives = 89/136 (65.44%), Query Frame = 1
Query:   19 TARSSTTVSGTLVFTDLAGFTAFTAERGDDAALALVERFESIVTELLPDDARVVKQLGDGLFLYVPNAHEAVSAAWAFSERCANESTS-DAPLWVRTGVHVGTAIARGTDLIGHDVNIASRITALAAPSEVLASDA 423
            TA  + T  G +VFTD+ GFT FTA +GD+AAL L+   + IV + + D  RVVK LGDGL L+  +A +AV +A    ER    S S D PLWVR GVH G    RG DLIGHDVN+A+RI  LAAP EVL S+A
Sbjct:    6 TAAGARTAEGAIVFTDIVGFTEFTALQGDEAALELLAVQDRIVQDTVDDHGRVVKALGDGLMLWFVDACDAVQSALTLQERFEKHSMSADVPLWVRIGVHYGRPALRGEDLIGHDVNVAARIVDLAAPGEVLVSEA 141          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20361.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5Q2RK18_9ACTN1.460e-4651.46Guanylate cyclase domain-containing protein n=1 Ta... [more]
A0A1F8RUR4_9CHLR4.100e-4650.30Guanylate cyclase domain-containing protein n=1 Ta... [more]
A0A6G0A6N3_9ACTN1.200e-4349.13Adenylate/guanylate cyclase domain-containing prot... [more]
A0A3A0FP94_9BACT6.880e-4150.00Adenylate/guanylate cyclase domain-containing prot... [more]
A0A6I1QKE8_9CHLR8.510e-4150.29Guanylate cyclase domain-containing protein n=1 Ta... [more]
A0A521WUK3_9CHLR1.820e-3950.00Adenylate/guanylate cyclase domain-containing prot... [more]
A0A7V9BYL4_9ACTN7.260e-3946.99Adenylate/guanylate cyclase domain-containing prot... [more]
A0A539DUP9_9ACTN6.220e-3846.15Adenylate cyclase n=1 Tax=Acidimicrobiaceae bacter... [more]
A0A536LRK6_9CHLR1.560e-3745.35Adenylate/guanylate cyclase domain-containing prot... [more]
A0A535DP98_9CHLR3.120e-3453.68Adenylate/guanylate cyclase domain-containing prot... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20361contigP-wetherbeei_contig20361:612..1190 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1380390.JIAT01000009_gene831
PFAMsGuanylate_cyc
Model size579
Max annot lvl201174|Actinobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.56e-23
EggNOG OGsCOG2114@1|root,COG2114@2|Bacteria,2IEX3@201174|Actinobacteria
DescriptionAdenylyl- / guanylyl cyclase, catalytic domain
Cds size573
COG categoryT
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186197.5870433-UTR-P-wetherbeei_contig20361:611..6171683186197.5870433-UTR-P-wetherbeei_contig20361:611..617Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig20361 612..617 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186197.6076846-CDS-P-wetherbeei_contig20361:617..11901683186197.6076846-CDS-P-wetherbeei_contig20361:617..1190Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20361 618..1190 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20361.2.1prot_P-wetherbeei_contig20361.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20361 618..1190 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20361.2.1

>prot_P-wetherbeei_contig20361.2.1 ID=prot_P-wetherbeei_contig20361.2.1|Name=mRNA_P-wetherbeei_contig20361.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=191bp
MTATTARSSTTVSGTLVFTDLAGFTAFTAERGDDAALALVERFESIVTEL
LPDDARVVKQLGDGLFLYVPNAHEAVSAAWAFSERCANESTSDAPLWVRT
GVHVGTAIARGTDLIGHDVNIASRITALAAPSEVLASDATRRAVEHELLD
APGACLDVLFETVGPVFVKGIDDPIRLSRVLPGVVDDCAG*
back to top

mRNA from alignment at P-wetherbeei_contig20361:612..1190+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20361.2.1 ID=mRNA_P-wetherbeei_contig20361.2.1|Name=mRNA_P-wetherbeei_contig20361.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=579bp|location=Sequence derived from alignment at P-wetherbeei_contig20361:612..1190+ (Phaeothamnion wetherbeei SAG_119_79)
CTGGGCATGACCGCGACGACGGCCCGGTCATCGACGACGGTGTCGGGCAC GTTGGTGTTCACCGACCTCGCCGGCTTCACCGCGTTCACCGCCGAGCGCG GCGACGATGCAGCGCTCGCGCTGGTCGAGCGGTTCGAGTCGATCGTCACC GAACTGCTGCCGGACGACGCCCGAGTCGTCAAGCAGCTCGGCGACGGCCT GTTCCTGTACGTGCCCAACGCGCACGAGGCCGTCTCGGCGGCATGGGCGT TCAGCGAGCGCTGCGCCAACGAGTCGACGTCGGATGCGCCACTCTGGGTG CGTACCGGCGTGCACGTGGGCACCGCGATCGCCCGCGGCACCGATCTCAT CGGTCACGACGTCAACATCGCATCGCGCATCACCGCGCTCGCGGCACCGT CGGAGGTGCTCGCCTCGGACGCGACACGCCGGGCGGTCGAGCACGAACTG CTCGACGCGCCCGGCGCGTGCCTTGATGTCCTGTTCGAAACAGTCGGCCC CGTGTTCGTCAAGGGCATCGACGATCCGATCAGGTTGTCCCGCGTGCTTC CCGGCGTGGTTGACGACTGCGCCGGCTGA
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig20361:612..1190+

>mRNA_P-wetherbeei_contig20361.2.1 ID=mRNA_P-wetherbeei_contig20361.2.1|Name=mRNA_P-wetherbeei_contig20361.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=573bp|location=Sequence derived from alignment at P-wetherbeei_contig20361:612..1190+ (Phaeothamnion wetherbeei SAG_119_79)
ATGACCGCGACGACGGCCCGGTCATCGACGACGGTGTCGGGCACGTTGGT
GTTCACCGACCTCGCCGGCTTCACCGCGTTCACCGCCGAGCGCGGCGACG
ATGCAGCGCTCGCGCTGGTCGAGCGGTTCGAGTCGATCGTCACCGAACTG
CTGCCGGACGACGCCCGAGTCGTCAAGCAGCTCGGCGACGGCCTGTTCCT
GTACGTGCCCAACGCGCACGAGGCCGTCTCGGCGGCATGGGCGTTCAGCG
AGCGCTGCGCCAACGAGTCGACGTCGGATGCGCCACTCTGGGTGCGTACC
GGCGTGCACGTGGGCACCGCGATCGCCCGCGGCACCGATCTCATCGGTCA
CGACGTCAACATCGCATCGCGCATCACCGCGCTCGCGGCACCGTCGGAGG
TGCTCGCCTCGGACGCGACACGCCGGGCGGTCGAGCACGAACTGCTCGAC
GCGCCCGGCGCGTGCCTTGATGTCCTGTTCGAAACAGTCGGCCCCGTGTT
CGTCAAGGGCATCGACGATCCGATCAGGTTGTCCCGCGTGCTTCCCGGCG
TGGTTGACGACTGCGCCGGCTGA
back to top