mRNA_P-wetherbeei_contig20310.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20310.1.1 vs. uniprot
Match: A0A7V1LLE2_9BACT (Uncharacterized protein n=1 Tax=Caldithrix abyssi TaxID=187145 RepID=A0A7V1LLE2_9BACT) HSP 1 Score: 72.0 bits (175), Expect = 1.050e-13 Identity = 42/104 (40.38%), Postives = 64/104 (61.54%), Query Frame = 1
Query: 1 EVRKHENDHLMEAGEFAISGPLLDMTEQASNGKSYVTSGKVQINIAEVSGDPLKTIQKMKKIERASKKPDEPSDQDLKVAAEAGVKRQKAEIELAEKRRKAEED 312
EVR HE HL AG A GP DM E + K Y G V+I+ ++V GDP +TI+K ++I++A+ P +PS +D VAAEA ++ E+E ++ +K E++
Sbjct: 26 EVRSHEQAHLRAAGSLARGGPDFDM-ETGPDNKQYAVGGNVEIDTSKVEGDPQRTIEKARQIQKAALAPADPSSKDRNVAAEA----RRMELEAQKELKKMEQE 124
BLAST of mRNA_P-wetherbeei_contig20310.1.1 vs. uniprot
Match: A0A1T1HF26_OCELI (Uncharacterized protein n=1 Tax=Oceanospirillum linum TaxID=966 RepID=A0A1T1HF26_OCELI) HSP 1 Score: 70.5 bits (171), Expect = 2.500e-12 Identity = 42/97 (43.30%), Postives = 58/97 (59.79%), Query Frame = 1
Query: 1 EVRKHENDHLMEAGEFAISGPLLDMTEQASNGKSYVTSGKVQINIAEVSGDPLKTIQKMKKIERASKKPDEPSDQDLKVAAEAGVKRQKAEIELAEK 291
EVR HE H G +A S P DMTE +G+ Y G+V I+ + V DP T+ K + +ERA+ P +PS+QDLKVAAEA +A +E+ E+
Sbjct: 63 EVRAHEEAHASVGGRYA-SAPSYDMTE-GPDGREYAVGGQVTIDTSPVPDDPEATLDKSQVVERAALAPAQPSEQDLKVAAEARAMGNEARVEILER 157
BLAST of mRNA_P-wetherbeei_contig20310.1.1 vs. uniprot
Match: UPI000A027ED2 (hypothetical protein n=1 Tax=Methylomarinum vadi TaxID=438855 RepID=UPI000A027ED2) HSP 1 Score: 67.8 bits (164), Expect = 8.210e-12 Identity = 39/94 (41.49%), Postives = 54/94 (57.45%), Query Frame = 1
Query: 1 EVRKHENDHLMEAGEFAISGPLLDMTEQASNGKSYVTSGKVQINIAEVSGDPLKTIQKMKKIERASKKPDEPSDQDLKVAAEAGVKRQKAEIEL 282
EVR HE HL AG A+ G +GK Y G+V I+IAE++GDP T++K I RA+ P +PS QD +VA +A +A++EL
Sbjct: 63 EVRAHEQAHLGAAGNLALGGANFTYAT-GLDGKRYAIGGEVNIDIAEIAGDPEATLKKADMIRRAALAPSKPSSQDQRVAGKAAAMANQAQLEL 155
BLAST of mRNA_P-wetherbeei_contig20310.1.1 vs. uniprot
Match: UPI00145D45E4 (hypothetical protein n=1 Tax=Alteromonas ponticola TaxID=2720613 RepID=UPI00145D45E4) HSP 1 Score: 68.6 bits (166), Expect = 1.660e-11 Identity = 43/94 (45.74%), Postives = 61/94 (64.89%), Query Frame = 1
Query: 1 EVRKHENDHLMEAGEFAISGPLLDMTEQASNGKSYVTSGKVQINIAEVSGDPLKTIQKMKKIERASKKPDEPSDQDLKVAAEAGVKRQKAEIEL 282
EVR+HE H G++A S P + E+ +GK Y G+V I+I+E + P KTIQKM+++ A+ P++PS QDLKVAAEA K +A+ EL
Sbjct: 129 EVRRHEEAHASVGGQYAGS-PQYEY-EEGPDGKRYAVGGEVSIDISEAA-TPEKTIQKMEQVRAAALAPEQPSQQDLKVAAEAQQKSAEAKAEL 219
BLAST of mRNA_P-wetherbeei_contig20310.1.1 vs. uniprot
Match: UPI001F48C5C3 (hypothetical protein n=1 Tax=Pseudomonas guryensis TaxID=2759165 RepID=UPI001F48C5C3) HSP 1 Score: 65.5 bits (158), Expect = 8.820e-11 Identity = 38/96 (39.58%), Postives = 58/96 (60.42%), Query Frame = 1
Query: 1 EVRKHENDHLMEAGEFAISGPLLDMTEQASNGKSYVTSGKVQINIAEVSGDPLKTIQKMKKIERASKKPDEPSDQDLKVAAEAGVKRQKAEIELAE 288
EVR HE H G +A G ++ +GKSYV SG+V I+++ + DP T++KM+ ++RA+ P EPS QD +VAA+A +A +LA+
Sbjct: 40 EVRAHEQAHAAVGGAYA--GAPAYTYKRGPDGKSYVVSGEVSIDVSPIPNDPQATLRKMEVVQRAALAPAEPSSQDRRVAAQAQALAAQARTDLAQ 133
BLAST of mRNA_P-wetherbeei_contig20310.1.1 vs. uniprot
Match: A0A4Q6YSB7_9GAMM (Catalase n=3 Tax=Pseudoalteromonadaceae TaxID=267888 RepID=A0A4Q6YSB7_9GAMM) HSP 1 Score: 66.6 bits (161), Expect = 9.090e-11 Identity = 41/95 (43.16%), Postives = 57/95 (60.00%), Query Frame = 1
Query: 1 EVRKHENDHLMEAGEFAISGPLLDMTEQASNGKSYVTSGKVQINIAEVSGDPLKTIQKMKKIERASKKPDEPSDQDLKVAAEAGVKRQKAEIELA 285
EVR HE H G++A S P + ++ +G +Y G+VQI++AEVSGDP TI KM+ + A+ P EPS D +AA+A K A+ ELA
Sbjct: 124 EVRVHEQAHASVGGKYAGS-PSYEY-QRGPDGTNYAVGGEVQIDVAEVSGDPQATIDKMQTVRAAALAPQEPSSADRAIAADATQKLAAAQAELA 216
BLAST of mRNA_P-wetherbeei_contig20310.1.1 vs. uniprot
Match: A0A0N1MSB9_9GAMM (Catalase n=4 Tax=Pseudoalteromonadaceae TaxID=267888 RepID=A0A0N1MSB9_9GAMM) HSP 1 Score: 66.2 bits (160), Expect = 1.260e-10 Identity = 40/95 (42.11%), Postives = 57/95 (60.00%), Query Frame = 1
Query: 1 EVRKHENDHLMEAGEFAISGPLLDMTEQASNGKSYVTSGKVQINIAEVSGDPLKTIQKMKKIERASKKPDEPSDQDLKVAAEAGVKRQKAEIELA 285
EVR HE H G++A S P D ++ +G +Y G+VQI++AE+ GDP TI+KM+ + A+ P EPS D +AA+A K A+ ELA
Sbjct: 124 EVRIHEQAHASVGGQYAGS-PSYDY-QRGPDGTNYAVGGEVQIDVAEIEGDPKATIEKMQTVRAAALAPAEPSGADRSIAADATQKLAAAQAELA 216
BLAST of mRNA_P-wetherbeei_contig20310.1.1 vs. uniprot
Match: A0A0W1L147_9GAMM (Catalase n=3 Tax=unclassified Pseudoalteromonas TaxID=194690 RepID=A0A0W1L147_9GAMM) HSP 1 Score: 65.9 bits (159), Expect = 1.780e-10 Identity = 38/94 (40.43%), Postives = 58/94 (61.70%), Query Frame = 1
Query: 1 EVRKHENDHLMEAGEFAISGPLLDMTEQASNGKSYVTSGKVQINIAEVSGDPLKTIQKMKKIERASKKPDEPSDQDLKVAAEAGVKRQKAEIEL 282
EVR HE H G++A S P + ++ +G++Y G+VQI++AE+ GDP TI+KM+ + A+ P EPS D +AA+A K A++EL
Sbjct: 127 EVRVHEQAHASVGGQYAGS-PSYEY-QRGPDGQNYAVGGEVQIDVAEIEGDPQATIEKMQTVRAAALAPAEPSGADRAIAADATQKLSAAQVEL 218
BLAST of mRNA_P-wetherbeei_contig20310.1.1 vs. uniprot
Match: A0A7W4D917_9PSED (Uncharacterized protein n=1 Tax=Pseudomonas guryensis TaxID=2759165 RepID=A0A7W4D917_9PSED) HSP 1 Score: 65.5 bits (158), Expect = 1.810e-10 Identity = 38/96 (39.58%), Postives = 58/96 (60.42%), Query Frame = 1
Query: 1 EVRKHENDHLMEAGEFAISGPLLDMTEQASNGKSYVTSGKVQINIAEVSGDPLKTIQKMKKIERASKKPDEPSDQDLKVAAEAGVKRQKAEIELAE 288
EVR HE H G +A G ++ +GKSYV SG+V I+++ + DP T++KM+ ++RA+ P EPS QD +VAA+A +A +LA+
Sbjct: 96 EVRAHEQAHAAVGGAYA--GAPAYTYKRGPDGKSYVVSGEVSIDVSPIPNDPQATLRKMEVVQRAALAPAEPSSQDRRVAAQAQALAAQARTDLAQ 189
BLAST of mRNA_P-wetherbeei_contig20310.1.1 vs. uniprot
Match: A0A3S0IGX6_9GAMM (Uncharacterized protein n=1 Tax=Shewanella atlantica TaxID=271099 RepID=A0A3S0IGX6_9GAMM) HSP 1 Score: 65.9 bits (159), Expect = 2.720e-10 Identity = 43/98 (43.88%), Postives = 58/98 (59.18%), Query Frame = 1
Query: 1 EVRKHENDHLMEAGEFAISGPLLDMTEQASNGKSYVTSGKVQINIAEVSGDPLKTIQKMKKIERASKKPDEPSDQDLKVAAEAGVKRQKAEIELAEKR 294
EV+ HE+ H G A S P E+ S+G Y G+V I+I+ V GDPL TI KM+K+ A+ P PS D++VAA+A K +A+ EL EKR
Sbjct: 251 EVKAHEHAHSSVGGSLAQS-PQFSY-ERGSDGNRYAVDGEVSIDISIVQGDPLATINKMRKVYAAAMAPANPSMADIRVAADALRKINQAQSELVEKR 346 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20310.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20310.1.1 >prot_P-wetherbeei_contig20310.1.1 ID=prot_P-wetherbeei_contig20310.1.1|Name=mRNA_P-wetherbeei_contig20310.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=99bp MEAGEFAISGPLLDMTEQASNGKSYVTSGKVQINIAEVSGDPLKTIQKMKback to top mRNA from alignment at P-wetherbeei_contig20310:1..327+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20310.1.1 ID=mRNA_P-wetherbeei_contig20310.1.1|Name=mRNA_P-wetherbeei_contig20310.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=327bp|location=Sequence derived from alignment at P-wetherbeei_contig20310:1..327+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20310:1..327+ >mRNA_P-wetherbeei_contig20310.1.1 ID=mRNA_P-wetherbeei_contig20310.1.1|Name=mRNA_P-wetherbeei_contig20310.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=297bp|location=Sequence derived from alignment at P-wetherbeei_contig20310:1..327+ (Phaeothamnion wetherbeei SAG_119_79)back to top |