mRNA_P-wetherbeei_contig20277.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20277.1.1 vs. uniprot
Match: A0A075B3L7_ROZAC (Integrase, catalytic core domain-containing protein n=1 Tax=Rozella allomycis (strain CSF55) TaxID=988480 RepID=A0A075B3L7_ROZAC) HSP 1 Score: 130 bits (326), Expect = 6.520e-30 Identity = 63/121 (52.07%), Postives = 83/121 (68.60%), Query Frame = 1
Query: 577 VPQSVAEALEGPEGTEWMAAMQEELSAHNRNKTWRRSSHVPHGRNVIGCRWVFAKKRAADGAILRYKARLVAQGFSQRPGVDYGATFAPVMSADAMRFIFALAAEFDFEVHQMDVVTAYLN 939
+P++V EAL G E EW AM+ E + NKTW+ +P R +GCRWVFAKK ++G + RYKARLVAQGFSQRPG+D T+APV ++R + AL + D+ +HQMD+VTAYLN
Sbjct: 372 IPRNVKEALSGAEANEWKQAMETEYKSLEENKTWK-LCELPASRTAVGCRWVFAKKFDSEGKLQRYKARLVAQGFSQRPGIDVEQTYAPVTRIQSVRILIALGVQLDWHMHQMDMVTAYLN 491
BLAST of mRNA_P-wetherbeei_contig20277.1.1 vs. uniprot
Match: A0A0A1WXQ3_ZEUCU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Zeugodacus cucurbitae TaxID=28588 RepID=A0A0A1WXQ3_ZEUCU) HSP 1 Score: 127 bits (320), Expect = 4.400e-29 Identity = 62/124 (50.00%), Postives = 86/124 (69.35%), Query Frame = 1
Query: 568 DGPVPQSVAEALEGPEGTEWMAAMQEELSAHNRNKTWRRSSHVPHGRNVIGCRWVFAKKRAADGAILRYKARLVAQGFSQRPGVDYGATFAPVMSADAMRFIFALAAEFDFEVHQMDVVTAYLN 939
DG P S+ AL PE +W AM+EE+ +H NKTW + +P G+ I +WVF KR A+GA +RYKARLV +G SQ+ G+DY TF+PV+ +++RF+FA+AA+ D VHQ+D VTA+LN
Sbjct: 767 DGDDPVSLEAALNSPEAGDWKRAMKEEIDSHKSNKTWVLTK-LPKGKRAINSKWVFKTKRNAEGAFVRYKARLVVKGCSQKQGIDYSETFSPVVRYNSLRFLFAMAAKHDLSVHQLDAVTAFLN 889
BLAST of mRNA_P-wetherbeei_contig20277.1.1 vs. uniprot
Match: A0A0C9RAA9_9HYME (POLX_4 protein (Fragment) n=1 Tax=Fopius arisanus TaxID=64838 RepID=A0A0C9RAA9_9HYME) HSP 1 Score: 127 bits (318), Expect = 6.510e-29 Identity = 60/120 (50.00%), Postives = 86/120 (71.67%), Query Frame = 1
Query: 580 PQSVAEALEGPEGTEWMAAMQEELSAHNRNKTWRRSSHVPHGRNVIGCRWVFAKKRAADGAILRYKARLVAQGFSQRPGVDYGATFAPVMSADAMRFIFALAAEFDFEVHQMDVVTAYLN 939
P ++ EAL PE +W AM+EE+ +H N+TW + +P G+ I +WVF KR A+GA++RYKARLV +G SQ+ GVDY TF+PV+ +++RF+FA+AA+ D VHQ+D VTA+LN
Sbjct: 233 PVNLEEALNSPEADDWKRAMKEEIESHKTNRTWVLTK-LPEGKRAINTKWVFKTKRNAEGALVRYKARLVVKGCSQKQGVDYSETFSPVVRYNSLRFLFAMAAKHDLSVHQLDAVTAFLN 351
BLAST of mRNA_P-wetherbeei_contig20277.1.1 vs. uniprot
Match: A0A034VP70_BACDO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Bactrocera dorsalis TaxID=27457 RepID=A0A034VP70_BACDO) HSP 1 Score: 127 bits (318), Expect = 7.820e-29 Identity = 60/120 (50.00%), Postives = 86/120 (71.67%), Query Frame = 1
Query: 580 PQSVAEALEGPEGTEWMAAMQEELSAHNRNKTWRRSSHVPHGRNVIGCRWVFAKKRAADGAILRYKARLVAQGFSQRPGVDYGATFAPVMSADAMRFIFALAAEFDFEVHQMDVVTAYLN 939
P ++ EAL PE +W AM+EE+ +H N+TW + +P G+ I +WVF KR A+GA++RYKARLV +G SQ+ GVDY TF+PV+ +++RF+FA+AA+ D VHQ+D VTA+LN
Sbjct: 752 PVNLEEALNSPEADDWKRAMKEEIESHKTNRTWVLTK-LPEGKRAINTKWVFKTKRNAEGALVRYKARLVVKGCSQKQGVDYSETFSPVVRYNSLRFLFAMAAKHDLSVHQLDAVTAFLN 870
BLAST of mRNA_P-wetherbeei_contig20277.1.1 vs. uniprot
Match: A0A5S6QFS2_TRIMR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6QFS2_TRIMR) HSP 1 Score: 119 bits (298), Expect = 2.220e-28 Identity = 58/110 (52.73%), Postives = 81/110 (73.64%), Query Frame = 1
Query: 610 PEGTEWMAAMQEELSAHNRNKTWRRSSHVPHGRNVIGCRWVFAKKRAADGAILRYKARLVAQGFSQRPGVDYGATFAPVMSADAMRFIFALAAEFDFEVHQMDVVTAYLN 939
PE +EW+AA+ EEL+AH RN++W S++P G+ I RWVF K ADG + + KARLVA+G+ Q+ G+DY TFAP++S ++R + ALA + DF V+QMDVVTA+LN
Sbjct: 4 PETSEWLAAVDEELAAHYRNRSWE-ISNLPKGKKAIKSRWVFKTKCKADGTVEKRKARLVAKGYLQKAGIDYEETFAPILSYSSLRLLLALAVQNDFYVNQMDVVTAFLN 112
BLAST of mRNA_P-wetherbeei_contig20277.1.1 vs. uniprot
Match: A0A0A9WI29_LYGHE (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Lygus hesperus TaxID=30085 RepID=A0A0A9WI29_LYGHE) HSP 1 Score: 122 bits (306), Expect = 2.720e-28 Identity = 62/120 (51.67%), Postives = 84/120 (70.00%), Query Frame = 1
Query: 580 PQSVAEALEGPEGTEWMAAMQEELSAHNRNKTWRRSSHVPHGRNVIGCRWVFAKKRAADGAILRYKARLVAQGFSQRPGVDYGATFAPVMSADAMRFIFALAAEFDFEVHQMDVVTAYLN 939
P++ +A+EGPE W AAM+EEL++ K W + +P G+ IG +WVF K ADG + RYKARLVAQGF+Q+PGVDY T++PV+S A+R +F LA ++ +HQMDV TAYLN
Sbjct: 26 PKTFKQAMEGPESDLWKAAMEEELTSLEVMKVWE-FTELPPGKTAIGSKWVFKIKYMADGTVERYKARLVAQGFTQKPGVDYEETYSPVISLPAIRLLFKLAVNNNWIIHQMDVKTAYLN 144
BLAST of mRNA_P-wetherbeei_contig20277.1.1 vs. uniprot
Match: A0A1M2VBJ6_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VBJ6_TRAPU) HSP 1 Score: 125 bits (313), Expect = 3.210e-28 Identity = 68/132 (51.52%), Postives = 87/132 (65.91%), Query Frame = 1
Query: 544 LTAAAAAVDGPVPQSVAEALEGPEGTEWMAAMQEELSAHNRNKTWRRSSHVPHGRNVIGCRWVFAKKRAADGAILRYKARLVAQGFSQRPGVDYGATFAPVMSADAMRFIFALAAEFDFEVHQMDVVTAYLN 939
+ A A V+G P+S+AEA PE W AM+EEL+A ++TWR P G NV+ CRWVF K+ A G + RY+ARLVA+GFSQ PGVD+ T+APV ++R A AA DFEVHQ+DV +AYLN
Sbjct: 462 MAAQMAEVEGLDPRSLAEAKRRPEWPRWEEAMEEELTALEAHRTWRLEKPPP-GANVVSCRWVFHAKKDASGNVYRYRARLVARGFSQIPGVDFFDTYAPVAKTASIRIALAFAARHDFEVHQVDVKSAYLN 592
BLAST of mRNA_P-wetherbeei_contig20277.1.1 vs. uniprot
Match: A0A060SJQ5_PYCCI (Uncharacterized protein (Fragment) n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SJQ5_PYCCI) HSP 1 Score: 124 bits (311), Expect = 6.900e-28 Identity = 77/163 (47.24%), Postives = 99/163 (60.74%), Query Frame = 1
Query: 484 AFPLPLASEAQQYSAA-------TAEILTAAAAA----VDGPVPQSVAEALEGPEGTEWMAAMQEELSAHNRNKTWRRSSHVPHGRNVIGCRWVFAKKRAADGAILRYKARLVAQGFSQRPGVDYGATFAPVMSADAMRFIFALAAEFDFEVHQMDVVTAYLN 939
A PLP E ++ A T EI AA AA V+G P+S+AEA++ PE W AM+EEL A +KTWR P N++ CRWVF K+ A G + RY+ARLVA+GFSQ PGVD+ T+APV ++R A AA +FEVHQ+DV +AYLN
Sbjct: 973 AAPLPTVQERREAEEARAVEDLLTEEIGGAAMAAHMAEVEGLDPRSLAEAMQRPEWPRWEEAMEEELRALEAHKTWRLERPPPDA-NIVSCRWVFHAKKDASGNVYRYRARLVARGFSQVPGVDFFDTYAPVAKTASIRVSLAFAARHNFEVHQLDVKSAYLN 1134
BLAST of mRNA_P-wetherbeei_contig20277.1.1 vs. uniprot
Match: A0A1M2VVQ8_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=2 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VVQ8_TRAPU) HSP 1 Score: 123 bits (309), Expect = 8.270e-28 Identity = 68/132 (51.52%), Postives = 85/132 (64.39%), Query Frame = 1
Query: 544 LTAAAAAVDGPVPQSVAEALEGPEGTEWMAAMQEELSAHNRNKTWRRSSHVPHGRNVIGCRWVFAKKRAADGAILRYKARLVAQGFSQRPGVDYGATFAPVMSADAMRFIFALAAEFDFEVHQMDVVTAYLN 939
+ A A V+G P S+AEA PE W AM+EEL A +KTWR P G N++ CRWVF K+ A G + RY+ARLVA+GFSQ PGVD+ T+APV ++R A AA DFEVHQ+DV +AYLN
Sbjct: 391 MAAQMAEVEGLDPCSLAEAKRRPEWPHWEEAMEEELHALEAHKTWRLEKPPP-GANIVSCRWVFHAKKDASGNVYRYRARLVARGFSQIPGVDFFDTYAPVAKTASIRIALAFAARHDFEVHQVDVKSAYLN 521
BLAST of mRNA_P-wetherbeei_contig20277.1.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM) HSP 1 Score: 122 bits (305), Expect = 1.850e-27 Identity = 69/129 (53.49%), Postives = 84/129 (65.12%), Query Frame = 1
Query: 553 AAAAVDGPVPQSVAEALEGPEGTEWMAAMQEELSAHNRNKTWRRSSHVPHGRNVIGCRWVFAKKRAADGAILRYKARLVAQGFSQRPGVDYGATFAPVMSADAMRFIFALAAEFDFEVHQMDVVTAYLN 939
AA DG P++V EA E +W AA+++EL + TW + P G NV+G WVF KR A GAI +YKARLVAQGFSQ PGVDY TFAPV ++R + ALAA FD+E+HQMDV AYLN
Sbjct: 21 AAGGGDGVEPRTVDEAKASGEWPQWEAAIEDELGRMKKMGTWELAEKPP-GANVVGSWWVFKIKRDASGAIAKYKARLVAQGFSQIPGVDYTDTFAPVAKLSSIRILAALAARFDWELHQMDVKNAYLN 148 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20277.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20277.1.1 >prot_P-wetherbeei_contig20277.1.1 ID=prot_P-wetherbeei_contig20277.1.1|Name=mRNA_P-wetherbeei_contig20277.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=307bp MEANTPQTAAPGTAADAERSNADVGAVAEVAAIAGEGDVIPPLDISRLIPback to top mRNA from alignment at P-wetherbeei_contig20277:6..944- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20277.1.1 ID=mRNA_P-wetherbeei_contig20277.1.1|Name=mRNA_P-wetherbeei_contig20277.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=939bp|location=Sequence derived from alignment at P-wetherbeei_contig20277:6..944- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20277:6..944- >mRNA_P-wetherbeei_contig20277.1.1 ID=mRNA_P-wetherbeei_contig20277.1.1|Name=mRNA_P-wetherbeei_contig20277.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=921bp|location=Sequence derived from alignment at P-wetherbeei_contig20277:6..944- (Phaeothamnion wetherbeei SAG_119_79)back to top |