mRNA_P-wetherbeei_contig2026.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig2026.3.1 vs. uniprot
Match: A0A836C840_9STRA (Glyco_transf_28 domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C840_9STRA) HSP 1 Score: 210 bits (535), Expect = 2.390e-62 Identity = 96/146 (65.75%), Postives = 118/146 (80.82%), Query Frame = 1
Query: 313 LNLALLVVGTSGDCQPFLILGAALRRQGHRVRIATHKEYEQEVRQHGFEYYPLGGNPRRLSQLMVEAGGRLLPLLWRSSDRRTLPEKISMLKEIIDSTWPACTEPDPADPEQRPFIADAIVSNPVTFAHVHCAEALSVPLVMMFPQ 750
+N+ +++VGT GD PF LG L++ GHRVRIATH E+E+EV+ GFE+YPLGG+PRRLS MVE GRLLP L S+R LPEK++ML EII STWPACT P+P+DP+Q PFIADAI+SNPVT+AH+HCAEALSVPL + FPQ
Sbjct: 1 MNIVIMIVGTRGDVHPFFGLGHLLQQDGHRVRIATHVEFEKEVKAEGFEFYPLGGDPRRLSAFMVETSGRLLPNLMNQSERAGLPEKMNMLNEIIQSTWPACTAPEPSDPKQTPFIADAIISNPVTYAHIHCAEALSVPLHLFFPQ 146
BLAST of mRNA_P-wetherbeei_contig2026.3.1 vs. uniprot
Match: A0A4D9CWR9_9STRA (PH domain-containing protein n=4 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CWR9_9STRA) HSP 1 Score: 177 bits (449), Expect = 4.600e-47 Identity = 92/190 (48.42%), Postives = 126/190 (66.32%), Query Frame = 1
Query: 190 DIEARGMAVLDPTDEVVDATTQEALRLARLHFLVSPLPLPALNLALLVVGTSGDCQPFLILGAALRRQGHRVRIATHKEYEQ-EVRQHGFEYYPLGGNPRRLSQLMVEAGGRLLPLLWRSSDRRT--LPEKISMLKEIIDSTWPACTEPDPADPEQRPFIADAIVSNPVTFAHVHCAEALSVPLVMMFPQ 750
D++ R + L P+ + + ++ A +A + F+ +P+P + + ++VVGT GD QPF+ LG AL+ QGHRVR+ATH Y V + G E+YPLGG+P +LS MV+ GR+ P T +PE+ +ML EII STWPACT PDP DP +R F ADAI+SNP + HVHCAEAL+VPL +MFPQ
Sbjct: 421 DLQHRSSS-LSPSSGLPMSGSESAAPMADVSFVPPSVPIPRMKVVMMVVGTRGDVQPFVTLGLALQAQGHRVRLATHAMYRPLVVEEAGLEFYPLGGDPLKLSAYMVKTAGRVFPFKLPDHQEMTKDVPEQRAMLSEIILSTWPACTAPDPEDPLKRGFRADAIISNPPVYGHVHCAEALNVPLHIMFPQ 609
BLAST of mRNA_P-wetherbeei_contig2026.3.1 vs. uniprot
Match: A0A7R9YMR4_DIALT (Hypothetical protein (Fragment) n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A7R9YMR4_DIALT) HSP 1 Score: 169 bits (427), Expect = 1.200e-46 Identity = 83/154 (53.90%), Postives = 112/154 (72.73%), Query Frame = 1
Query: 289 VSPLPLPALNLALLVVGTSGDCQPFLILGAALRRQGHRVRIATHKEYEQEVRQHGFEYYPLGGNPRRLSQLMVEAGGRLLPLLWRSSDRRTLPEKISMLKEIIDSTWPACTEPDPADPEQRPFIADAIVSNPVTFAHVHCAEALSVPLVMMFPQ 750
++P+ LPAL++A+LVVGT GD PF+ L AL+ +GHRVRIATH E+ + V +HG E+YPL G+P++LS+ MV +GG ++ +R P K+ ML+EI+ S WPA T DP D + RPF+ADAI++NPV F HVH AEAL VPL M+FPQ
Sbjct: 42 LAPVELPALSVAILVVGTHGDVLPFVSLAIALQAKGHRVRIATHVEHRKLVLKHGVEHYPLAGDPKQLSRWMVASGGTII-----GEAKRYEPAKLGMLREIVHSLWPAVTAKDPYDFDARPFVADAIIANPVCFGHVHVAEALGVPLHMIFPQ 190
BLAST of mRNA_P-wetherbeei_contig2026.3.1 vs. uniprot
Match: A0A7S4BKR0_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BKR0_CHRCT) HSP 1 Score: 172 bits (436), Expect = 1.460e-46 Identity = 83/151 (54.97%), Postives = 105/151 (69.54%), Query Frame = 1
Query: 298 LPLPALNLALLVVGTSGDCQPFLILGAALRRQGHRVRIATHKEYEQEVRQHGFEYYPLGGNPRRLSQLMVEAGGRLLPLLWRSSDRRTLPEKISMLKEIIDSTWPACTEPDPADPEQRPFIADAIVSNPVTFAHVHCAEALSVPLVMMFPQ 750
LPLP+L + L+VGT GD PFL L L+ +GHRVR+ATH + V QH E+YPL G+PR LS+ MVE+GG ++ + T K++MLK+I+ S W ACT PDP DPE PF+ADAI++NP TF H+HCAEAL VPL MMFPQ
Sbjct: 192 LPLPSLRIVFLIVGTHGDVLPFLSLAQMLKSRGHRVRLATHGVHRAMVLQHAIEFYPLAGDPRTLSKWMVESGGTIIGEVRTFKSANT---KLAMLKDIVHSLWYACTAPDPYDPEASPFVADAIIANPPTFGHIHCAEALGVPLHMMFPQ 339
BLAST of mRNA_P-wetherbeei_contig2026.3.1 vs. uniprot
Match: A0A7S0SQ85_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0SQ85_9STRA) HSP 1 Score: 171 bits (434), Expect = 4.570e-45 Identity = 80/151 (52.98%), Postives = 106/151 (70.20%), Query Frame = 1
Query: 298 LPLPALNLALLVVGTSGDCQPFLILGAALRRQGHRVRIATHKEYEQEVRQHGFEYYPLGGNPRRLSQLMVEAGGRLLPLLWRSSDRRTLPEKISMLKEIIDSTWPACTEPDPADPEQRPFIADAIVSNPVTFAHVHCAEALSVPLVMMFPQ 750
LP+P L++ L+ VGT GD QPF +G L++ GHRVRIATH Y + GFE+YPLGG+P +LS+ MV+ G ++P L + +P+ ++ML EII S W AC PDP D +R FIADAI+SNPVT+ H+HCAEAL +PL +MFPQ
Sbjct: 226 LPIPKLSIVLMAVGTRGDIQPFTQIGRRLQQDGHRVRIATHSCYRDYITASGFEFYPLGGDPHKLSEFMVKTHGNIIPSLADLINE--VPKNLAMLSEIIHSCWGACVNPDPDDETKRQFIADAIISNPVTYGHIHCAEALGIPLHLMFPQ 374
BLAST of mRNA_P-wetherbeei_contig2026.3.1 vs. uniprot
Match: A0A8J5XPE0_DIALT (Glyco_transf_28 domain-containing protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XPE0_DIALT) HSP 1 Score: 169 bits (427), Expect = 3.500e-44 Identity = 83/154 (53.90%), Postives = 112/154 (72.73%), Query Frame = 1
Query: 289 VSPLPLPALNLALLVVGTSGDCQPFLILGAALRRQGHRVRIATHKEYEQEVRQHGFEYYPLGGNPRRLSQLMVEAGGRLLPLLWRSSDRRTLPEKISMLKEIIDSTWPACTEPDPADPEQRPFIADAIVSNPVTFAHVHCAEALSVPLVMMFPQ 750
++P+ LPAL++A+LVVGT GD PF+ L AL+ +GHRVRIATH E+ + V +HG E+YPL G+P++LS+ MV +GG ++ +R P K+ ML+EI+ S WPA T DP D + RPF+ADAI++NPV F HVH AEAL VPL M+FPQ
Sbjct: 21 LAPVELPALSVAILVVGTHGDVLPFVSLAIALQAKGHRVRIATHVEHRKLVLKHGVEHYPLAGDPKQLSRWMVASGGTII-----GEAKRYEPAKLGMLREIVHSLWPAVTAKDPYDFDARPFVADAIIANPVCFGHVHVAEALGVPLHMIFPQ 169
BLAST of mRNA_P-wetherbeei_contig2026.3.1 vs. uniprot
Match: A0A7S4BL28_CHRCT (Hypothetical protein (Fragment) n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4BL28_CHRCT) HSP 1 Score: 160 bits (406), Expect = 4.290e-42 Identity = 82/152 (53.95%), Postives = 104/152 (68.42%), Query Frame = 1
Query: 295 PLPLPALNLALLVVGTSGDCQPFLILGAALRRQGHRVRIATHKEYEQEVRQHGFEYYPLGGNPRRLSQLMVEAGGRLLPLLWRSSDRRTLPEKISMLKEIIDSTWPACTEPDPADPEQRPFIADAIVSNPVTFAHVHCAEALSVPLVMMFPQ 750
PLP+P L +A+L+VGT GD PF+ L AL+ GHRVRIATH + + V H E+YPL G+P++LS MV++GG L L R +K+ MLK+II+S WPA TE DPAD PF A+AI++NP TF H+H AEAL VPL MMFPQ
Sbjct: 240 PLPIPTLQIAILIVGTHGDVLPFIGLAKALQSLGHRVRIATHAIHRKLVHSHNVEFYPLEGDPKQLSAWMVKSGGTLQGEL-----RNPSAKKLEMLKDIIESLWPAVTERDPADEFALPFTAEAIIANPPTFGHIHVAEALGVPLHMMFPQ 386
BLAST of mRNA_P-wetherbeei_contig2026.3.1 vs. uniprot
Match: A0A7R9VJ26_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9VJ26_9STRA) HSP 1 Score: 153 bits (387), Expect = 1.110e-41 Identity = 74/152 (48.68%), Postives = 102/152 (67.11%), Query Frame = 1
Query: 298 LPLPALNLALLVVGTSGDCQPFLILGAALRRQGHRVRIATHKEYEQEVRQHGFEYYPLGGNPRRLSQLMVEAGGRLLPLLWRSSDRR-TLPEKISMLKEIIDSTWPACTEPDPADPEQRPFIADAIVSNPVTFAHVHCAEALSVPLVMMFPQ 750
LP+P+LN+ +++ GT GD PF+ L L+R GHRVRIATH+ + + V G E+YPL G+P+ LSQ MV+ GG + W + +PEK +M+KEI+ S+WPA T+ DP DP PF+AD I+SNP H+H AEAL +P +MFPQ
Sbjct: 35 LPMPSLNVCVMICGTHGDVLPFVGLAHELQRLGHRVRIATHENHRETVVSKGVEFYPLAGDPKSLSQWMVQTGGSV----WGEAKHPGMIPEKTAMVKEIMLSSWPAATDSDPEDPGACPFVADVIISNPPVMGHIHVAEALGIPCHIMFPQ 182
BLAST of mRNA_P-wetherbeei_contig2026.3.1 vs. uniprot
Match: A0A6S8J3L1_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A6S8J3L1_9STRA) HSP 1 Score: 161 bits (407), Expect = 1.550e-41 Identity = 80/152 (52.63%), Postives = 103/152 (67.76%), Query Frame = 1
Query: 298 LPLPALNLALLVVGTSGDCQPFLILGAALRRQGHRVRIATHKEYEQEVRQHGFEYYPLGGNPRRLSQLMVEAGGRLLPLLWRSSDRRTL-PEKISMLKEIIDSTWPACTEPDPADPEQRPFIADAIVSNPVTFAHVHCAEALSVPLVMMFPQ 750
LPLPA+N+ ++VVGT GD PF L AL+ GHRVRIATH+ + + V G EYYP+ G+P+ LS MVE GG + W + R L PEK M+ +++ S+WPA TE DP DPE +PF+ADAI+SNP H+H AEAL VP +MFPQ
Sbjct: 38 LPLPAMNVCIMVVGTHGDVAPFCGLAKALQASGHRVRIATHETHRKLVTSRGIEYYPMAGDPKTLSGWMVETGGSI----WGEARRPDLIPEKNKMVLDMMRSSWPAATEADPEDPEAQPFLADAIISNPPVIGHIHVAEALGVPCHIMFPQ 185
BLAST of mRNA_P-wetherbeei_contig2026.3.1 vs. uniprot
Match: A0A7S4IAD7_9STRA (Hypothetical protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IAD7_9STRA) HSP 1 Score: 161 bits (407), Expect = 1.560e-41 Identity = 84/208 (40.38%), Postives = 125/208 (60.10%), Query Frame = 1
Query: 130 LVPSSEKTPAFTMPEPRCGGDIEARGMAVLDPTDEVVDATTQEALRLARLHFLVSPLPLPALNLALLVVGTSGDCQPFLILGAALRRQGHRVRIATHKEYEQEVRQHGFEYYPLGGNPRRLSQLMVEAGGRLLPLLWR-SSDRRTLPEKISMLKEIIDSTWPACTEPDPADPEQRPFIADAIVSNPVTFAHVHCAEALSVPLVMMFPQ 750
++P + TPA T + G AVL DE D ++ A + F LP+P +N+ +L+VGT GD PF L L+ GHRVR+ATH + + V + ++YPL G+P++LS MVE GG + W +++ + +PEK +M+K+II S WPA T+ DP DP+ PF+ADA+++NP H+H EAL++PL +MFPQ
Sbjct: 10 VIPQVKATPA-TEAADELRRKVRKAGRAVLKLDDEDDDVECGKSGASAIVEFKGLKLPVPKMNICILIVGTHGDVMPFCGLARELQSLGHRVRVATHTMHRKTVVSNDLDFYPLAGDPKQLSAWMVETGGSI----WNEAANPKLIPEKTAMMKDIIKSCWPAVTQKDPGDPDGEPFVADAVIANPPVIGHIHVCEALAIPLHIMFPQ 212 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2026.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig2026.3.1 >prot_P-wetherbeei_contig2026.3.1 ID=prot_P-wetherbeei_contig2026.3.1|Name=mRNA_P-wetherbeei_contig2026.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=236bp MEDSKNEPSDEEEISSLSTLQLAWSPRSLVPSSEKTPAFTMPEPRCGGDIback to top mRNA from alignment at P-wetherbeei_contig2026:3927..5709+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig2026.3.1 ID=mRNA_P-wetherbeei_contig2026.3.1|Name=mRNA_P-wetherbeei_contig2026.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1783bp|location=Sequence derived from alignment at P-wetherbeei_contig2026:3927..5709+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig2026:3927..5709+ >mRNA_P-wetherbeei_contig2026.3.1 ID=mRNA_P-wetherbeei_contig2026.3.1|Name=mRNA_P-wetherbeei_contig2026.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=708bp|location=Sequence derived from alignment at P-wetherbeei_contig2026:3927..5709+ (Phaeothamnion wetherbeei SAG_119_79)back to top |