mRNA_P-wetherbeei_contig2026.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig2026.2.1 vs. uniprot
Match: A0A6H5KNH6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNH6_9PHAE) HSP 1 Score: 152 bits (383), Expect = 1.420e-34 Identity = 94/278 (33.81%), Postives = 148/278 (53.24%), Query Frame = 1
Query: 349 RARTEAPANGRTVLTYADKIEIFKLFDQRSHKRP*LGVVR*DQLLSLLFSSGGTLCEIASSFCVQIDPLSVCKIKGNQAKIEAQLRKPGKHAAAAVKICLPASPAVKLAVLSSIDMVRSLGMPINRFTLQRFAVMAKNDLLASDKLGDEEDKRFVDFSGGLSWAKWFVQRYALSSTVLHGLGGGVDKAAIKAGIAAICAALVDHDFENIYNVDETGLF-RILPTVTYLSQHDDRKSARGAKGMKVKDRITLFVCTYATGRQEVPLSIIGTAKNTRCFK 1179
+A +A + RT L + ++E+ KL D+++ T EIA + + +S+ IKG + ++E Q + + P ++ VL+ I+ R + +PI R T++ F + ++ L+A+ + +R F W + V R+ L+S VLHG G +D A G+AAI A + ENI+NVDETG++ R+LP TYLS + RK+ARG KGMK KDR++ ++CT ATG +VP++IIG AKN RCF+
Sbjct: 93 KAAGKAGKSTRTRLNFGQQLEVLKLLDEKT-----------------------TYAEIARRYSISTSAISL--IKGKRQQLE-QAAATNARSTTSKSSRRGDFPELEKDVLALIEEARRVPLPITRATIESFGIAVRDKLVAAPSTPADAKERLRMFGASEKWVRNLVNRHNLTSFVLHGEAGSLDAEAAAEGMAAIRRACSKYKVENIFNVDETGMYYRLLPKRTYLSTTEKRKTARGTKGMKAKDRVSAYMCTNATGTAKVPMAIIGRAKNPRCFR 344
BLAST of mRNA_P-wetherbeei_contig2026.2.1 vs. uniprot
Match: A0A6H5LCM9_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCM9_9PHAE) HSP 1 Score: 124 bits (312), Expect = 7.330e-26 Identity = 70/175 (40.00%), Postives = 98/175 (56.00%), Query Frame = 1
Query: 658 PAVKLAVLSSIDMVRSLGMPINRFTLQRFAVMAKNDLLASDKLGDEEDKRFVDFSGGLSWAKWFVQRYALSSTVLHGLGGGVDKAAIKAGIAAICAALVDHDFENIYNVDETGL-FRILPTVTYLSQHDDRKSARGAKGMKVKDRITLFVCTYATGRQEVPLSIIGTAKNTRCFK 1179
PAV+ L ++ R MP+ R L+ F A+ LL E R DF G WA+ FV+R + S HG G VDK AI+A + + A + I+NVDETGL ++++P TYLS +++K+ARG+KGM KDR++ + A G VP++IIG AK RCFK
Sbjct: 121 PAVEAIALDLLEKARKAKMPVTREVLRSFGRSARATLLGDPAASKEVKARVQDFKAGERWAQNFVKRNNIQSARPHGEAGSVDKEAIEAAMEELKALCAKYSARFIFNVDETGLQWKLMPRRTYLSTSEEQKTARGSKGMFFKDRLSAIMSANADGTANVPMAIIGKAKEPRCFK 295
BLAST of mRNA_P-wetherbeei_contig2026.2.1 vs. uniprot
Match: A0A6H5JUU2_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUU2_9PHAE) HSP 1 Score: 119 bits (298), Expect = 9.440e-26 Identity = 72/175 (41.14%), Postives = 98/175 (56.00%), Query Frame = 1
Query: 664 VKLAVLSSIDMVRSLGMPINRFTLQRFAVMAKNDLLASDKLGDEEDKRFVDFSGGLSWAKWFVQRYALSSTVLHGLGGGVDKAAIKAGIAAICAALVDHDFENIYNVDETGL-FRILPTVTYLSQHDDRKSARGAKGMKVKDRITLFVCTYATGRQEVPLSIIGTAKNTRCFKGR 1185
V+ V+ + R+L M + R +Q F A+ L + D E ++ F+ W K FV+R L S LHG G VD AI + I + E +YN DETGL +RI+P TYL+ + RK+ RG KGM+ KDR+T ++ T A+GR+ VPLS IGTAK RCFK R
Sbjct: 15 VEQVVMEMLVQARALRMLVKRDAIQAFGRKARR-ALENAAPTDTERVQYSGFNASEGWVKKFVKRNNLHSRTLHGEAGSVDDEAIADRLRVIRETCAQYTPECVYNADETGLCYRIMPKATYLAPSELRKTVRGVKGMRAKDRVTAYMATSASGRK-VPLSFIGTAKEPRCFKIR 187
BLAST of mRNA_P-wetherbeei_contig2026.2.1 vs. uniprot
Match: A0A6H5L4D9_9PHAE (DDE-1 domain-containing protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4D9_9PHAE) HSP 1 Score: 123 bits (309), Expect = 1.120e-25 Identity = 71/175 (40.57%), Postives = 97/175 (55.43%), Query Frame = 1
Query: 655 SPAVKLAVLSSIDMVRSLGMPINRFTLQRFAVMAKNDLLASDKLGDEEDKRFVDFSGGLSWAKWFVQRYALSSTVLHGLGGGVDKAAIKAGIAAICAALVDHDFENIYNVDETGL-FRILPTVTYLSQHDDRKSARGAKGMKVKDRITLFVCTYATGRQEVPLSIIGTAKNTRCF 1176
+P V L ++ R MP+ R L+ F A+ LLA E R DF G WA+ FV+R ++ S LHG G V+K AIK + + A + I NVDETGL ++++P YLS +DRK+ARG+KGM KDR++ +C A G +V +SIIG AK RCF
Sbjct: 55 NPEVDAIALDLLEKARKTKMPVTRDVLRSFGRAARATLLADPAASKEVKARVEDFKAGERWARNFVKRNSIDSVRLHGEAGSVNKEAIKEAMEELKALCAKYLARLIVNVDETGLQWKLMPRRMYLSNLEDRKTARGSKGMFFKDRLSAIMCANADGTAKVDMSIIGKAKGPRCF 229
BLAST of mRNA_P-wetherbeei_contig2026.2.1 vs. uniprot
Match: A0A6H5JM90_9PHAE (HTH CENPB-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM90_9PHAE) HSP 1 Score: 114 bits (284), Expect = 1.870e-24 Identity = 67/159 (42.14%), Postives = 90/159 (56.60%), Query Frame = 1
Query: 712 MPINRFTLQRFAVMAKNDLLASDKLGDEEDKRFVDFSGGLSWAKWFVQRYALSSTVLHGLGGGVDKAAIKAGIAAICAALVDHDFENIYNVDETGL-FRILPTVTYLSQHDDRKSARGAKGMKVKDRITLFVCTYATGRQEVPLSIIGTAKNTRCFKGR 1185
MP+NR +Q F A+ L + D E ++ F+ W K FV+R L S LHG G VD AI + I + E +YN DET L +RI+P TYL+ + +K+ RG K M+ KDR+T ++ T A+GR+ VPLS IGTAK RCFK R
Sbjct: 1 MPVNRDAIQAFGRKARR-ALENAASTDAERVQYSGFNASEGWVKKFVKRNTLHSRTLHGKAGSVDDEAIADRLRVIRETCAQYAPEWVYNADETRLCYRIMPKATYLAPSELKKTVRGVKRMRAKDRVTAYMATSASGRK-VPLSFIGTAKEPRCFKIR 157
BLAST of mRNA_P-wetherbeei_contig2026.2.1 vs. uniprot
Match: A0A6H5K258_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K258_9PHAE) HSP 1 Score: 108 bits (269), Expect = 6.800e-22 Identity = 67/175 (38.29%), Postives = 90/175 (51.43%), Query Frame = 1
Query: 664 VKLAVLSSIDMVRSLGMPINRFTLQRFAVMAKNDLLASDKLGDEEDKRFVDFSGGLSWAKWFVQRYALSSTVLHGLGGGVDKAAIKAGIAAICAALVDHDFENIYNVDETGL-FRILPTVTYLSQHDDRKSARGAKGMKVKDRITLFVCTYATGRQEVPLSIIGTAKNTRCFKGR 1185
V+ AV+ + R L MP+NR +Q F ++ W K FV+R L S LHG G VD AI + I + E +YN D TGL +RI+P TYL+ + +K+ RG KGM+ KDR+T ++ T +GR+ VPLS IGTAK RCFK R
Sbjct: 15 VEQAVMEMLVQARVLRMPVNRDAIQAFGGCNASE----------------------GWVKKFVKRNNLHSRTLHGEAGSVDDEAIADRLRVIRETCAQYAPEGVYNADGTGLCYRIMPKATYLAPSELKKTVRGVKGMRAKDRVTAYMATSGSGRK-VPLSFIGTAKEPRCFKIR 166
BLAST of mRNA_P-wetherbeei_contig2026.2.1 vs. uniprot
Match: A0A7S3XL47_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XL47_HETAK) HSP 1 Score: 107 bits (268), Expect = 6.990e-22 Identity = 57/132 (43.18%), Postives = 82/132 (62.12%), Query Frame = 1
Query: 808 FVDFSGGLSWAKWFVQRYALSSTVLHGLGGGV-DKAAIKAGIAAICAALVDHDFENIYNVDETGLF-RILPTVTYLSQHDDRKSARGAKGMKVKDRITLFVCTYATGRQEVPLSIIGTAKNTRCFKGRLPSV 1197
+ DF W + F+ R+ L S LHG G V ++ +KA ++L D E+IYN+DETGLF R+LP TY+ Q +++K+ RG K MK KDR+T+ VC +ATG +VPL IG + + RCF+ R P +
Sbjct: 5 YKDFQASQGWVQKFIIRHGLRSDNLHGEAGDVKEEDHVKAIGELQASSLAKTDPEDIYNMDETGLFYRLLPRRTYVLQSEEKKTTRGTKAMKAKDRLTVIVCCHATGTDKVPLMDIGKSADPRCFRLRKPKI 136
BLAST of mRNA_P-wetherbeei_contig2026.2.1 vs. uniprot
Match: A0A6H5JML3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JML3_9PHAE) HSP 1 Score: 108 bits (271), Expect = 4.190e-21 Identity = 62/139 (44.60%), Postives = 79/139 (56.83%), Query Frame = 1
Query: 766 LLASDKLGDEEDKRFVDFSGGLSWAKWFVQRYALSSTVLHGLGGGVDKAAIKAGIAAICAALVDHDFENIYNVDETGL-FRILPTVTYLSQHDDRKSARGAKGMKVKDRITLFVCTYATGRQEVPLSIIGTAKNTRCFK 1179
LLA R DF G WAK FV+R + S HG G VDK AIK G+ I + I+NVDETGL ++++P TYLS DRK+ARG+K M KDR++ +C A G +V ++IIG AK RCFK
Sbjct: 168 LLADTATSAAVRDRVEDFKAGERWAKNFVKRNKIQSMRFHGEAGSVDKEAIKEGLEEIRDLCEKYPARFIFNVDETGLQWKLMPRRTYLSTSYDRKTARGSKSMHFKDRLSAIMCCNADGTAKVDMTIIGRAKEPRCFK 306
BLAST of mRNA_P-wetherbeei_contig2026.2.1 vs. uniprot
Match: A0A6H5JLL8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLL8_9PHAE) HSP 1 Score: 105 bits (263), Expect = 4.870e-20 Identity = 64/150 (42.67%), Postives = 87/150 (58.00%), Query Frame = 1
Query: 742 FAVMAKNDLLASDKLGDEEDKRFVD-FSGGLSWAKWFVQRYALSSTVLHGLGGGVDKAAIKAGIAAICAALVDHDFENIYNVDETGL-FRILPTVTYLSQHDDRKSARGAKGMKVKDRITLFVCTYATGRQEVPLSIIGTAKNTRCFKGR 1185
F AK L A K E++R +D F+ WAK F+ R+ L S HG G VD AI + + + +D ENI N DET L +R+ P +Y + +D+ + RG KGM K+RITL+V A+GR+ +PLSIIG AKN RCF+ R
Sbjct: 150 FGRKAKTSLAA--KASTAEERRRLDAFNASEGWAKHFISRHNLRSKSQHGQAGSVDDEAIADELRKLREVIAKYDPENIINCDETALQYRMSPRRSYTTPGEDKSTVRGVKGMSFKERITLYVAADASGRK-LPLSIIGHAKNPRCFRLR 296
BLAST of mRNA_P-wetherbeei_contig2026.2.1 vs. uniprot
Match: A0A6H5JB59_9PHAE (DDE-1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB59_9PHAE) HSP 1 Score: 102 bits (254), Expect = 1.450e-19 Identity = 87/249 (34.94%), Postives = 117/249 (46.99%), Query Frame = 3
Query: 1296 DQAKARLDQRVFAAWFASVFLPHVRRLTSKKVILLLDSCSGYGALVDPRMPVTVTALPLNCTARHQPMDQGVIAALKVRYRTALQDKKVRPRAPATSSAPPPRRSGCQLLLWASPRVTSRTSWTPWR*RQQH---GRRWTRGVWRAAGPRPASCRRRCRLSSKRFKAAAHNLVHPPSRCGLRGCARGLQVGAAGARAEDEDIAEALLALQVGDGASRAAAM---VQRWMQLEEEDDVAEALRADLRDEL 2024
Q A D RVF W++ VFLPHVR +TS+KV L++D+ S + LVDP+ V + LP NCT++HQPMD G+IAA KVRYRT L +V TS+A QL A R R Q H W+ P R + + K + L R L DED+ EAL L + GA+ A VQ W+++EE++ +AEA DL+D+L
Sbjct: 66 SQKNACSDARVFKLWWSQVFLPHVRSVTSEKVFLIMDNHSSHADLVDPKEQVKILDLPPNCTSKHQPMDAGIIAAWKVRYRTKLLGIRV---DTMTSAA--------QLREQAKERRVIRGCMGLAEGAQPHILDAAELGLEAWKEVLPETIK-RGDVGKNIRNKKESLEELTDLVQRLSLE----------TKKTTVDEDLGEALKGLGLAPGATPTQASMKAVQTWLRVEEKEGIAEANIEDLKDDL 292 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2026.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig2026.2.1 >prot_P-wetherbeei_contig2026.2.1 ID=prot_P-wetherbeei_contig2026.2.1|Name=mRNA_P-wetherbeei_contig2026.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=208bp MVRSLGMPINRFTLQRFAVMAKNDLLASDKLGDEEDKRFVDFSGGLSWAKback to top mRNA from alignment at P-wetherbeei_contig2026:254..2688+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig2026.2.1 ID=mRNA_P-wetherbeei_contig2026.2.1|Name=mRNA_P-wetherbeei_contig2026.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2435bp|location=Sequence derived from alignment at P-wetherbeei_contig2026:254..2688+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig2026:254..2688+ >mRNA_P-wetherbeei_contig2026.2.1 ID=mRNA_P-wetherbeei_contig2026.2.1|Name=mRNA_P-wetherbeei_contig2026.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=624bp|location=Sequence derived from alignment at P-wetherbeei_contig2026:254..2688+ (Phaeothamnion wetherbeei SAG_119_79)back to top |