mRNA_P-wetherbeei_contig20244.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20244.1.1
Unique NamemRNA_P-wetherbeei_contig20244.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20244.1.1 vs. uniprot
Match: A0A7W8E4P7_9BACT (ATP-dependent helicase HrpB n=1 Tax=Granulicella aggregans TaxID=474949 RepID=A0A7W8E4P7_9BACT)

HSP 1 Score: 318 bits (815), Expect = 5.080e-98
Identity = 192/400 (48.00%), Postives = 257/400 (64.25%), Query Frame = 1
Query:    1 EAPPGTGKTTRVPPALAEAFPGGKILVLEPRRLAARWSSQRVAQETGATWGREVGYQVRFEDRTQAETRLIYLTQGVFSRRLLRDPELKGIAVVVLDEFHERNLDNDLALAWLVRLHSQGLGPRVLVMSATLPAG-LSEKLGGPPTVMCEAPLFPVIQTYT-IPQGTLENSVREAVEKESPRQPGEHTLVFLPGMREIRACERELTSLATRRKAEIKILHGSLPVSEQDQVLAPCPDRCRWILATNVAETSLTIPGVSCVIDSGLARRHDQRPGKAAHILEVARISQFSARQRAGRAGRTGPGKCVRLFTQADFHNRPEADTPEILRTDLAEIGLFLARLSVSPL-ELPWLDSPTSERWESALGLLEALGALKGGGLTELGGHMADVPLHPRLSRFLLKA 1191
            EAPPG GKTTRVPPA+      G+++VLEPRR+AAR S++RVA E G   G  VGYQVRFE++T   TRL ++T+G+ +R L+ DP LKG+  V+LDEFHER+LD+DLALA L RL       R++VMSATL A  ++  L   P V  E  +FP+   YT      L   +R+AVE    +Q     L FLPG+ EIR   RE  ++A +    +  LHG L  +EQD+ + P P+R R ILATNVAE+S+T+ GV+ VIDSGLAR     P      L V RIS+ SA QRAGRAGRTGPG+ +RL+ + D+  RPE DTPEILR+DL+++ L L  + ++ L +L W+D P +E  +SA  LL+ +GA       ++   M   PL PRLSR +++A
Sbjct:   32 EAPPGAGKTTRVPPAIL-GLVRGEVIVLEPRRIAARMSARRVAWELGEEVGGTVGYQVRFEEKTGPATRLRFVTEGILTRGLISDPTLKGVDAVILDEFHERHLDSDLALALLKRLQQTRPTLRIIVMSATLDAAPIARFLNDCPVVRSEGRMFPLTVRYTPYSSEPLPIRMRKAVEVLMKQQHSGSILAFLPGIAEIRQSMRECEAVARQSGLIMLPLHGDLSPAEQDRAVLPSPER-RLILATNVAESSVTVEGVTAVIDSGLARHATYSPWTGLPTLHVGRISKASATQRAGRAGRTGPGEVMRLYPEEDYLLRPEHDTPEILRSDLSQLLLTLRAMKITHLTDLDWIDLPPAEAIQSAESLLDQIGATG-----DMAQRMTRYPLTPRLSRIVIEA 424          
BLAST of mRNA_P-wetherbeei_contig20244.1.1 vs. uniprot
Match: A0A3M1TWR1_9DELT (ATP-dependent helicase HrpB n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M1TWR1_9DELT)

HSP 1 Score: 318 bits (816), Expect = 1.720e-97
Identity = 199/416 (47.84%), Postives = 257/416 (61.78%), Query Frame = 1
Query:    1 EAPPGTGKTTRVPPALAEAFPGGKILVLEPRRLAARWSSQRVAQETGATWGREVGYQVRFEDRTQAETRLIYLTQGVFSRRLLRDPELKGIAVVVLDEFHERNLDNDLALAWLVRLHSQGLGPRVLVMSATLPAG-LSEKLGGPPTVMCEAPLFPVIQTYTIPQGT--LENSVREAVEKESPRQPGEHTLVFLPGMREIRACERELTSLATRRKAEIKILHGSLPVSEQDQVLAPCPDRCRWILATNVAETSLTIPGVSCVIDSGLARRHDQRPGKAAHILEVARISQFSARQRAGRAGRTGPGKCVRLFTQADFHNRPEADTPEILRTDLAEIGLFLARLSVSPLELPWLDSPTSERWESALGLLEALGALKGGG-LTELGGHMADVPLHPRLSRFLLK-----APGKRAVAVAV 1221
            +A PG GKTTRVPPAL EA  G ++LVLEPRR+AAR ++ RVA E G   G  VGY+ RF+ RT A+TRL Y+T+G+F RRLL DP L+G+  VVLDEFHER+L +DLALA L RL ++     V+VMSATL A  ++  LG  P +      +PV   +     T  LE  VR AV+      P    LVFLPG  EIR  +  L   A  R   +  LHGS+  + QD+VL P  DR + ILATNVAETS+TI GV  V+DSGL R     P      L++  IS+  A+QRAGRAGRT PG C+RL+T+ +   RP+   PEI R DL+E+ L  A L + P  LPWL++P     E+A  LL  LGA+  GG LT+ G  ++ +PLHPRL   +L+     AP + A+A A+
Sbjct:   32 QAEPGAGKTTRVPPALLEAVEG-EVLVLEPRRIAARMAATRVAAERGEPVGEGVGYRTRFDRRTSAKTRLTYVTEGLFIRRLLADPTLRGVGAVVLDEFHERSLHSDLALAVLRRLQAERPDLTVVVMSATLHAEPVARFLGDAPVLAAPGRCYPVDVRHLSKPATRPLEVEVRAAVKALCRELPEGDLLVFLPGAAEIRRAQAALEEYARARSLLLLPLHGSMSPAAQDRVLRPA-DRRKVILATNVAETSVTIDGVRAVVDSGLFRMAGHSPFSGLPTLQLRGISKAQAQQRAGRAGRTAPGLCLRLYTEHELRTRPDHHPPEIRRADLSELLLTTAALGIDPERLPWLEAPPPAALEAARVLLTRLGAIDAGGHLTDRGRDISKLPLHPRLGVLVLEGAARGAPYEAALAAAL 445          
BLAST of mRNA_P-wetherbeei_contig20244.1.1 vs. uniprot
Match: A0A239MEV8_9BACT (ATP-dependent helicase HrpB n=2 Tax=Granulicella rosea TaxID=474952 RepID=A0A239MEV8_9BACT)

HSP 1 Score: 316 bits (810), Expect = 2.600e-97
Identity = 190/399 (47.62%), Postives = 254/399 (63.66%), Query Frame = 1
Query:    1 EAPPGTGKTTRVPPALAEAFPGGKILVLEPRRLAARWSSQRVAQETGATWGREVGYQVRFEDRTQAETRLIYLTQGVFSRRLLRDPELKGIAVVVLDEFHERNLDNDLALAWLVRLHSQGLGPRVLVMSATLPAG-LSEKLGGPPTVMCEAPLFPVIQTYT-IPQGTLENSVREAVEKESPRQPGEHTLVFLPGMREIRACERELTSLATRRKAEIKILHGSLPVSEQDQVLAPCPDRCRWILATNVAETSLTIPGVSCVIDSGLARRHDQRPGKAAHILEVARISQFSARQRAGRAGRTGPGKCVRLFTQADFHNRPEADTPEILRTDLAEIGLFLARLSVSPLELPWLDSPTSERWESALGLLEALGALKGGGLTELGGHMADVPLHPRLSRFLLKA 1191
            EA PG GKTTRVP AL E    G+++VLEPRR+AAR +++RVA E     G  VGYQVRFE+ +  +TRL ++T+G+ SRRLL DP LKG+  VVLDEFHER+LD+DLALA L RL       +++VMSATL AG ++  LGG P +  E   FP+   Y       L   VR+A+E         H L FLPG+ EIR   RE+  +A      +  LHG L  +EQD+ +AP  +R + ILATNVAE+S+T+ GV+ VID GLAR     P      LEV R+S+ SA+QRAGRAGRTGPG+ +RL+ + D+  R E D PEI R DL+++ L L  + ++P E+ WLD+P +E   +A  LL+ LGA   G + E    +A  PL PRL+R L+++
Sbjct:   29 EAAPGAGKTTRVPAALLELV-AGEVVVLEPRRIAARMAARRVAWERNEEAGETVGYQVRFEEVSGPKTRLRFVTEGILSRRLLSDPALKGVDAVVLDEFHERHLDSDLALALLKRLQKTRPELKIVVMSATLDAGPIARYLGGCPVLRSEGRAFPLAVQYAPYTADALPVQVRKAMELLVKEGHAGHVLTFLPGLAEIRRTAREVEGVARAAGFAVLPLHGDLTPAEQDRAVAPSTER-KLILATNVAESSVTVEGVTAVIDGGLARIATHSPWTGLPTLEVGRVSRASAQQRAGRAGRTGPGRVLRLYPEEDYMRRAEHDLPEIARADLSQLCLSLRVMGIAPGEIEWLDAPPAEALANAEALLDRLGAA--GAMAE---KLARYPLPPRLARILVES 420          
BLAST of mRNA_P-wetherbeei_contig20244.1.1 vs. uniprot
Match: A0A6B9YVP7_9BACT (ATP-dependent helicase HrpB n=2 Tax=Edaphobacter sp. 12200R-103 TaxID=2703788 RepID=A0A6B9YVP7_9BACT)

HSP 1 Score: 314 bits (804), Expect = 1.820e-96
Identity = 198/408 (48.53%), Postives = 257/408 (62.99%), Query Frame = 1
Query:    1 EAPPGTGKTTRVPPALAEAFPGGKILVLEPRRLAARWSSQRVAQETGATWGREVGYQVRFEDRTQAETRLIYLTQGVFSRRLLRDPELKGIAVVVLDEFHERNLDNDLALAWLVRLHSQGLGPRVLVMSATLP-AGLSEKLGGPPTVMCEAPLFPVIQTYTIPQGT--LENSVREAVEKESPRQPGEHTLVFLPGMREIRACERELTSLATRRKAEIKILHGSLPVSEQDQVLAPCPDRCRWILATNVAETSLTIPGVSCVIDSGLARRHDQRPGKAAHILEVARISQFSARQRAGRAGRTGPGKCVRLFTQADFHNRPEADTPEILRTDLAEIGLFLARLSVSPL-ELPWLDSPTSERWESALGLLEALGALKGGGLTELGGHMADVPLHPRLSRFLLKAPGKRAVA 1212
            EAPPG GKTTRVPP L      G++LVLEPRR+AAR ++ RVA+E G   G  VGYQVRFE+ +   TRL Y+T+G   RR++ DPELKG+  V+LDEFHERNLD D ALA L RL  +     +LVMSATL  A ++  LG  P +  E  +F V  T+ +P     L N V +AV+     +   H LVFLPG  EIR   RE   +A +    +  LHG L V EQD+VL P  +R + ILATNVAETS+T+ GV+ VIDSGLAR            L + RIS+ SA+QRAGRAGRTGPG+ +RL+ + D+  RPE D PEILR+DL+ + L +  +SV+   EL WLD+P +    +A  LL+ LGA+ G    +    +A  PL PRLSR + +A  +R+VA
Sbjct:   21 EAPPGAGKTTRVPP-LVLTLVRGEVLVLEPRRIAARTAALRVAEEMGERLGDTVGYQVRFEEVSGPRTRLRYVTEGTLLRRMVADPELKGVDAVILDEFHERNLDGDFALALLNRLQQRRPELLILVMSATLDGAPVAAYLGNCPVLRSEGRMFEVTVTH-LPYSPKPLANQVSDAVQLLIADENAGHILVFLPGTAEIRQAMRECQQVADKNDMLVLPLHGGLSVEEQDRVLKPA-ERKKLILATNVAETSVTVDGVTAVIDSGLARSSSASRWTGLPTLHLGRISKASAKQRAGRAGRTGPGRVLRLYAEEDYARRPEYDAPEILRSDLSGLCLAIRAMSVAGWKELEWLDAPPAVAVVNAEALLDRLGAVTG----DAAARLARYPLTPRLSRIVEEAI-RRSVA 420          
BLAST of mRNA_P-wetherbeei_contig20244.1.1 vs. uniprot
Match: A0A7C6E9B3_9BACT (ATP-dependent helicase HrpB n=1 Tax=Candidatus Solibacter sp. TaxID=2068625 RepID=A0A7C6E9B3_9BACT)

HSP 1 Score: 314 bits (804), Expect = 3.400e-96
Identity = 198/406 (48.77%), Postives = 251/406 (61.82%), Query Frame = 1
Query:    1 EAPPGTGKTTRVPPALAEAFPGGKILVLEPRRLAARWSSQRVAQETGATWGREVGYQVRFEDRTQAETRLIYLTQGVFSRRLLRDPELKGIAVVVLDEFHERNLDNDLALAWLVRLHSQGLGP--RVLVMSATLPAGLSEKLGGPPTVMCEAPLFPVIQTYT-IPQGTLENSVREAVEKESPRQPGEHTLVFLPGMREIRACERELTSLATRRKAEIKILHGSLPVSEQDQVLAPCPDRCRWILATNVAETSLTIPGVSCVIDSGLARRHDQRPGKAAHILEVARISQFSARQRAGRAGRTGPGKCVRLFTQADFHNRPEADTPEILRTDLAEIGLFLARLSVSPLELPWLDSPTSERWESALGLLEALGALKG-GGLTELGGHMADVPLHPRLSRFLLKAPGKRA 1206
            +APPG GKTTRVPPAL E   GGK+LVLEPRRLAAR +++RVA E G   G+ VGYQVRFE+ T  +TRL+++T GV  RRLL DP L+ ++ VVLDEFHER L++DLALA L RL  Q   P  R++VMSATL A     L G   +   A  FP++  YT +    LE  V  A+++          LVFLPG  EIR   R    LA R    +  LHG LPV EQ++ +AP P R + I +TNVAE+S+TI G++ VIDSGLAR     P      LEV RIS+ SA         TGPG+ VRL+   DF  RPE DTPEILR DL+   L L  +   P +L +LD+P  + WE+A  LL  LGAL   G +T +G  MA +PL PRL++ +L+A  + A
Sbjct:   21 QAPPGAGKTTRVPPALLEL--GGKVLVLEPRRLAARLAARRVAFERGEKPGQSVGYQVRFEEATGPDTRLVFMTDGVLLRRLLADPCLREVSCVVLDEFHERRLESDLALALLRRLQ-QTTRPELRLVVMSATLNAAPLAALLGCQVLQASARQFPLVIHYTPLSSEPLEIQVTAALQRLLSEGLEGDVLVFLPGAAEIRRAMRACEGLARRASLLLLPLHGDLPVEEQERAIAPAPQR-KVIFSTNVAESSVTIEGITAVIDSGLARVASHSPWSGLPRLEVRRISKASAXXXXXXXXXTGPGQVVRLYPLEDFARRPEHDTPEILREDLSSALLTLRAMRFEPCQLEFLDAPPQQAWEAAERLLVRLGALDELGRITAIGAEMARLPLEPRLAKLVLEADRRGA 422          
BLAST of mRNA_P-wetherbeei_contig20244.1.1 vs. uniprot
Match: A0A7X2PSX3_9BACT (ATP-dependent helicase HrpB n=1 Tax=Bryobacterales bacterium TaxID=2026791 RepID=A0A7X2PSX3_9BACT)

HSP 1 Score: 311 bits (797), Expect = 1.380e-95
Identity = 199/403 (49.38%), Postives = 250/403 (62.03%), Query Frame = 1
Query:    1 EAPPGTGKTTRVPPALAEAFPGGKILVLEPRRLAARWSSQRVAQETGATWGREVGYQVRFEDRTQAETRLIYLTQGVFSRRLLRDPELKGIAVVVLDEFHERNLDNDLALAWLVRLHSQGLGP-RVLVMSATLPAG-LSEKLGGPPTVMCEAPLFPVIQTYTIPQGT-LENSVREAVEKESPRQPGEHTLVFLPGMREIRACERELTSLATRRKAEIKILHGSLPVSEQDQVLAPCPDRCRWILATNVAETSLTIPGVSCVIDSGLARRHDQRPGKAAHILEVARISQFSARQRAGRAGRTGPGKCVRLFTQADFHNRPEADTPEILRTDLAEIGLFLARLSVSPLELPWLDSPTSERWESALGLLEALGALKGGGLTELGGHMADVPLHPRLSRFLLKAPGK 1200
            EA PG GKTTRVPPAL     G ++LVLEPRRLAAR +++RVA E     G  VGYQVRFE     +TRL +LT+GV +RRLL DPELKG+  VVLDEFHER+LD DLALA L RL        R+ VMSATL  G ++  LG  P V  E  L+ +   YT      LE  V EA+E           LVFLPG  EIR   R L SLA R    +  LHG L  ++QD+ + P P R + IL+TNVAE+S+TI GV+ VIDSGLAR     P      L++ RISQ SA QRAGRAGRT PG+ +RL+T  D H RP ADTPEILR +L+++ L L  +++  LE  WLD+P +  + +A  LL+ LGA            MA++PL PRL++ +L+A  +
Sbjct:   26 EAAPGAGKTTRVPPALLPLVKG-EVLVLEPRRLAARMAARRVAAERKERVGETVGYQVRFESMGGPDTRLRFLTEGVLTRRLLDDPELKGVGAVVLDEFHERHLDGDLALALLRRLQKTSRPTLRLAVMSATLATGPVASFLGDCPVVRSEGRLYHLRVAYTPHSAAALEEQVFEAIESLLREGLDGDVLVFLPGAAEIRRSARALESLAARNGFLVLPLHGDLSPADQDRAVMPGPRR-KVILSTNVAESSVTIEGVTAVIDSGLARVAADSPWTGLPSLDIQRISQASAIQRAGRAGRTAPGRVIRLYTADDLHRRPAADTPEILRRELSQMVLQLRAMNMENLE--WLDAPPAAAFAAANALLDQLGASP---------RMAEMPLPPRLAKLVLEAAAR 415          
BLAST of mRNA_P-wetherbeei_contig20244.1.1 vs. uniprot
Match: A0A7I9VSG2_9DELT (ATP-dependent helicase HrpB n=1 Tax=Anaeromyxobacter sp. Red267 TaxID=2590199 RepID=A0A7I9VSG2_9DELT)

HSP 1 Score: 312 bits (799), Expect = 7.120e-95
Identity = 193/405 (47.65%), Postives = 246/405 (60.74%), Query Frame = 1
Query:    1 EAPPGTGKTTRVPPALAEA--FPGGKILVLEPRRLAARWSSQRVAQETGATWGREVGYQVRFEDRTQAETRLIYLTQGVFSRRLLRDPELKGIAVVVLDEFHERNLDNDLALAWLVRLHSQGLGPRVLVMSATLPAGLSEKLGGPPTVMCEAPLFPVIQTYTIPQGT-----LENSVREAVEKESPRQPGEHTLVFLPGMREIRACERELTSLATRRKAEIKILHGSLPVSEQDQVLAPCPDRCRWILATNVAETSLTIPGVSCVIDSGLARRHDQRPGKAAHILEVARISQFSARQRAGRAGRTGPGKCVRLFTQADFHNRPEADTPEILRTDLAEIGLFLARLSVSPLELPWLDSPTSERWESALGLLEALGALKGGG-LTELGGHMADVPLHPRLSRFLLKA 1191
            EAPPG GKTTR+PPAL  A     G+++VLEPRRLAAR +++RVA E G   G  VG+QVRFED +   TRL Y+T+ + +RRLL  PEL G+  VVLDEFHER+LD DLALA L RL ++    +++VMSATL AG   +  G P++  E   FPV   +  P+       LE  V  AV +    +P  H LVFLPG  EIR     L+ L     AE+  LHG LP  EQD+ + P   R + IL+TNVAETS+TI GV+ V+DSGLAR     P      LE+ ++S+ SA         T  G+C+RL+T+ D   RPE D PEI R DLA   L LA+L V+  E  WLD+P    WE+A  LL  LGAL   G +T LG  +A  PLHPRL+R ++ A
Sbjct:   26 EAPPGAGKTTRLPPALLTAGLAGDGEVVVLEPRRLAARMAARRVAAELGERPGETVGWQVRFEDVSGPRTRLRYVTEALLTRRLLATPELPGVGAVVLDEFHERHLDGDLALALLARLAARRPDLKLVVMSATLDAGPVARFLGAPSLRSEGRAFPVELEHLSPEEAARDQRLEERVASAVRRALRDEPDGHVLVFLPGAAEIRRAREALSGLTL---AEVLPLHGDLPPEEQDRAVGPSARR-KVILSTNVAETSVTIEGVAAVVDSGLARVAAHSPWSGLPTLELRKVSRASAAXXXXXXXXTRAGRCLRLYTRHDHDARPEFDLPEIRREDLAGTALALAQLGVAAGEGFWLDAPPPAAWEAAHALLRDLGALDAAGRITALGRRLARFPLHPRLARLVVAA 426          
BLAST of mRNA_P-wetherbeei_contig20244.1.1 vs. uniprot
Match: A0A7W0V1E6_9BACT (ATP-dependent helicase HrpB n=1 Tax=Pyrinomonadaceae bacterium TaxID=2283092 RepID=A0A7W0V1E6_9BACT)

HSP 1 Score: 311 bits (797), Expect = 1.620e-94
Identity = 197/411 (47.93%), Postives = 252/411 (61.31%), Query Frame = 1
Query:    1 EAPPGTGKTTRVPPALAEA--FPGGKILVLEPRRLAARWSSQRVAQETGATWGREVGYQVRFEDRTQAETRLIYLTQGVFSRRLLRDPELKGIAVVVLDEFHERNLDNDLALAWLVRLHSQGLGP-RVLVMSATLPAG-LSEKLGGPPTVMCEAPLFPV-IQTYTIPQGTL-ENSVREAVEKESPRQPGEHTLVFLPGMREIRACERELTSLATRRKAEIKILHGSLPVSEQDQVLAPCPDRCRWILATNVAETSLTIPGVSCVIDSGLARRHDQRPGKAAHILEVARISQFSARQRAGRAGRTGPGKCVRLFTQADFHNRPEADTPEILRTDLAEIGLFLARLSVSPLE-LPWLDSPTSERWESALGLLEALGALKGGG-LTELGGHMADVPLHPRLSRFLLKAPGKRAV 1209
            EA PG GKTTRVP AL +A    GG++ VLEPRRLAAR S++RVA++ G   G  VGYQVRF++ +   TRL +LT+G+ +RRLL DP+L  + VV+LDEFHER+L  DLALA L RL  +     R++ MSATL AG ++  LG   TV  E   F V ++    P   L E  V  AV +          LVFLPG  EIR  +     LA++    +  LHG LP +EQD+ L P   R + IL+TNVAETS+TI GV  VIDSGLARR    P      L   RISQ SA QRAGRAGRT PGKC+RL+T+ DF  RP  +TPEI R DLAE  L L    ++ L    W +SP+ +   +A  LL+ L A+ G G +T LG  M  +PLHPRL+R +++A  +  +
Sbjct:   26 EATPGAGKTTRVPIALLDAGLAGGGEVWVLEPRRLAARMSARRVAEDRGEQLGETVGYQVRFDEVSSQRTRLRFLTEGILTRRLLHDPQLSAVGVVILDEFHERHLQADLALALLRRLQRETRPDLRIIAMSATLDAGSIALYLGNCQTVSAEGRRFEVAVEHLDRPDDRLLEAQVEGAVSRLISDNLDGDVLVFLPGAAEIRRAQEACAGLASKADLLVVPLHGELPAAEQDRALRPAGQR-KIILSTNVAETSVTIEGVVAVIDSGLARRPGHSPWSGLPTLNTGRISQASATQRAGRAGRTRPGKCLRLYTRQDFVARPAHETPEINRLDLAEPALELHAAGITDLNNFEWFESPSIDALSAAETLLQRLSAVDGSGRVTTLGSRMLRLPLHPRLARVVVEAESRGVI 435          
BLAST of mRNA_P-wetherbeei_contig20244.1.1 vs. uniprot
Match: A0A1H5TD24_9BACT (ATP-dependent helicase HrpB n=1 Tax=Bryocella elongata TaxID=863522 RepID=A0A1H5TD24_9BACT)

HSP 1 Score: 309 bits (792), Expect = 1.710e-94
Identity = 203/417 (48.68%), Postives = 257/417 (61.63%), Query Frame = 1
Query:    1 EAPPGTGKTTRVPPALAEAFPGGKILVLEPRRLAARWSSQRVAQETGATWGREVGYQVRFEDRTQAETRLIYLTQGVFSRRLLRDPELKGIAVVVLDEFHERNLDNDLALAWLVRLHSQGLGP--RVLVMSATLP-AGLSEKLGGPPTVMCEAPLFPV-IQTYTIPQGTLENSVREAVEKESPRQPGEHTLVFLPGMREIRACERELTSLATRRKAEIKILHGSLPVSEQDQVLAPCPDRCRWILATNVAETSLTIPGVSCVIDSGLARRHDQRPGKAAHILEVARISQFSARQRAGRAGRTGPGKCVRLFTQADFHNRPEADTPEILRTDLAEIGLFLARLSVSPLE-LPWLDSPTSERWESALGLLEALGALKGGGLTELGGHMADVPLHPRLSRFLL-----KAPGKRAVAVAV 1221
            EA PG GKTTRVPPAL      G+ILVLEPRR+AAR +++RVA E     G  VGYQVRFE+ +   TRL +LT+GV +RRLL D EL+G+++V+LDEFHER+LD DLALA L RL  Q   P  ++LVMSATL  A ++  LG  P +  E  +FP+ I+        LE  +  AV++ +    G HTLVFLPG  EIR        +A R   E+  LHG L   EQD+ +AP   R + ILATNVAE+S+TI GV+ VIDSGLAR     P      LEVARISQ SARQRAGRAGRTGPG  +RL+ + D   R   D PEILR DL+++ L L  L ++ ++ L WLD P     E+A  LL+ +GA       +    +A  PL PRL+R L+     K P    VAVA+
Sbjct:   46 EAAPGAGKTTRVPPALLPHV-DGEILVLEPRRIAARLAARRVAYELHEEPGETVGYQVRFENVSGPRTRLRFLTEGVLTRRLLTDRELRGVSLVILDEFHERHLDTDLALALLRRLQ-QTTRPDLKLLVMSATLDTAPIAHFLGDAPVLRSEGRIFPLAIEHLPYSPAPLEQQIASAVDQAARTSTG-HTLVFLPGAAEIRRANTTCDPIARRFDLELLPLHGDLTPVEQDRAVAPSTKR-KVILATNVAESSITIDGVTTVIDSGLARIATVSPWTGLPTLEVARISQASARQRAGRAGRTGPGVVLRLYPEEDLRQRAAHDLPEILRADLSQLALALRVLGIAHMQQLEWLDHPPQVAMEAAAALLDRMGATG-----QQAAEIARYPLPPRLARVLVEGQHRKVPHNACVAVAL 453          
BLAST of mRNA_P-wetherbeei_contig20244.1.1 vs. uniprot
Match: A0A841K2F2_9BACT (ATP-dependent helicase HrpB n=2 Tax=Silvibacterium bohemicum TaxID=1577686 RepID=A0A841K2F2_9BACT)

HSP 1 Score: 307 bits (787), Expect = 6.480e-94
Identity = 189/400 (47.25%), Postives = 249/400 (62.25%), Query Frame = 1
Query:    1 EAPPGTGKTTRVPPALAEAFPGGKILVLEPRRLAARWSSQRVAQETGATWGREVGYQVRFEDRTQAETRLIYLTQGVFSRRLLRDPELKGIAVVVLDEFHERNLDNDLALAWLVRLHSQGLGPRVLVMSATLPAG-LSEKLGGPPTVMCEAPLFPV-IQTYTIPQGTLENSVREAVEKESPRQPGEHTLVFLPGMREIRACERELTSLATRRKAEIKILHGSLPVSEQDQVLAPCPDRCRWILATNVAETSLTIPGVSCVIDSGLARRHDQRPGKAAHILEVARISQFSARQRAGRAGRTGPGKCVRLFTQADFHNRPEADTPEILRTDLAEIGLFLARLSVSPLE-LPWLDSPTSERWESALGLLEALGALKGGGLTELGGHMADVPLHPRLSRFLLKA 1191
            EAPPG GKTTRVPPAL +    G+++VLEPRR+AAR ++QRVA E G   G   GYQVR E+     TR+ YLT+G+ +RRLL DPELKG+  VVLDEFHER+L++D ALA L RL       +V+VMSATL A  +++ LGG P +  E   F + I+        L+  V  AVE+     P  H LVFLPG  EIR   RE   +A R    +  LHG L  +EQD+ ++P   R + ILATNVAE+S+T+ GV+ VIDSGLAR     P      L + R+S+ SA QRAGRAGRTGPG  +RL+ + D+  RP+ D PEI+R+DL+++ L L  + +   + + WLD+P     ESA  LL+ L A       E+   +A  PL PRLSR L++A
Sbjct:   29 EAPPGAGKTTRVPPALLKNI-RGEVVVLEPRRIAARLAAQRVAAELGEKVGETAGYQVRLEEAIGPRTRIRYLTEGILTRRLLSDPELKGVDAVVLDEFHERHLESDFALALLKRLQRTRPELQVVVMSATLDAAPVAKYLGGCPMLRSEGRRFELSIEHLPYSPEPLQKQVSSAVERLVRESPTGHILVFLPGAAEIRRAMRECEPVAHRTGLLLLALHGDLSSAEQDRAVSPSSQR-KVILATNVAESSVTVEGVTAVIDSGLARYATYSPWTGLPSLHIGRVSKASAIQRAGRAGRTGPGSVLRLYPEEDYLRRPDHDAPEIVRSDLSQLCLALRSMRIPHFDSIEWLDAPPVAAIESAESLLDRLNASG-----EMAKKLARYPLPPRLSRILVEA 421          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20244.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7W8E4P7_9BACT5.080e-9848.00ATP-dependent helicase HrpB n=1 Tax=Granulicella a... [more]
A0A3M1TWR1_9DELT1.720e-9747.84ATP-dependent helicase HrpB n=1 Tax=Deltaproteobac... [more]
A0A239MEV8_9BACT2.600e-9747.62ATP-dependent helicase HrpB n=2 Tax=Granulicella r... [more]
A0A6B9YVP7_9BACT1.820e-9648.53ATP-dependent helicase HrpB n=2 Tax=Edaphobacter s... [more]
A0A7C6E9B3_9BACT3.400e-9648.77ATP-dependent helicase HrpB n=1 Tax=Candidatus Sol... [more]
A0A7X2PSX3_9BACT1.380e-9549.38ATP-dependent helicase HrpB n=1 Tax=Bryobacterales... [more]
A0A7I9VSG2_9DELT7.120e-9547.65ATP-dependent helicase HrpB n=1 Tax=Anaeromyxobact... [more]
A0A7W0V1E6_9BACT1.620e-9447.93ATP-dependent helicase HrpB n=1 Tax=Pyrinomonadace... [more]
A0A1H5TD24_9BACT1.710e-9448.68ATP-dependent helicase HrpB n=1 Tax=Bryocella elon... [more]
A0A841K2F2_9BACT6.480e-9447.25ATP-dependent helicase HrpB n=2 Tax=Silvibacterium... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20244contigP-wetherbeei_contig20244:16..1236 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog278963.ATWD01000002_gene777
PFAMsDEAD,HA2,Helicase_C,HrpB_C
Model size1221
Max annot lvl204432|Acidobacteriia
KEGG koko:K03579
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.3e-96
EggNOG OGsCOG1643@1|root,COG1643@2|Bacteria,3Y38N@57723|Acidobacteria,2JHKA@204432|Acidobacteriia
EC3.6.4.13
DescriptionATP-dependent helicase HrpB
Cds size1221
COG categoryL
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186194.472105-CDS-P-wetherbeei_contig20244:15..12361683186194.472105-CDS-P-wetherbeei_contig20244:15..1236Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20244 16..1236 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20244.1.1prot_P-wetherbeei_contig20244.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20244 16..1236 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20244.1.1

>prot_P-wetherbeei_contig20244.1.1 ID=prot_P-wetherbeei_contig20244.1.1|Name=mRNA_P-wetherbeei_contig20244.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=407bp
EAPPGTGKTTRVPPALAEAFPGGKILVLEPRRLAARWSSQRVAQETGATW
GREVGYQVRFEDRTQAETRLIYLTQGVFSRRLLRDPELKGIAVVVLDEFH
ERNLDNDLALAWLVRLHSQGLGPRVLVMSATLPAGLSEKLGGPPTVMCEA
PLFPVIQTYTIPQGTLENSVREAVEKESPRQPGEHTLVFLPGMREIRACE
RELTSLATRRKAEIKILHGSLPVSEQDQVLAPCPDRCRWILATNVAETSL
TIPGVSCVIDSGLARRHDQRPGKAAHILEVARISQFSARQRAGRAGRTGP
GKCVRLFTQADFHNRPEADTPEILRTDLAEIGLFLARLSVSPLELPWLDS
PTSERWESALGLLEALGALKGGGLTELGGHMADVPLHPRLSRFLLKAPGK
RAVAVAV
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mRNA from alignment at P-wetherbeei_contig20244:16..1236-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20244.1.1 ID=mRNA_P-wetherbeei_contig20244.1.1|Name=mRNA_P-wetherbeei_contig20244.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1221bp|location=Sequence derived from alignment at P-wetherbeei_contig20244:16..1236- (Phaeothamnion wetherbeei SAG_119_79)
GAGGCGCCACCCGGCACCGGCAAGACGACGCGCGTCCCCCCTGCCCTGGC CGAAGCTTTTCCCGGCGGCAAGATTTTGGTGCTCGAGCCTCGTCGTCTCG CCGCCCGTTGGTCGAGCCAACGCGTGGCTCAGGAGACCGGAGCCACCTGG GGGCGAGAAGTTGGCTACCAGGTCCGCTTCGAGGACCGCACGCAAGCAGA GACCCGCCTCATCTACCTGACGCAGGGCGTTTTTTCGCGTCGACTTCTGC GCGATCCTGAGCTGAAGGGAATCGCTGTCGTCGTCCTCGATGAATTTCAC GAGCGTAACCTGGATAACGATCTGGCGCTTGCGTGGCTGGTCCGGCTGCA CTCGCAGGGGCTCGGGCCGCGTGTACTGGTCATGTCGGCGACTTTGCCCG CGGGTCTCTCCGAGAAACTGGGCGGCCCTCCGACAGTGATGTGCGAGGCG CCACTCTTTCCCGTTATCCAGACCTACACAATTCCCCAAGGGACGCTGGA AAATAGCGTGCGCGAAGCCGTCGAGAAAGAAAGCCCGCGCCAGCCCGGAG AGCACACTCTGGTCTTCTTGCCAGGGATGCGCGAGATCCGCGCCTGTGAA CGCGAACTCACCAGTCTGGCCACGCGACGCAAGGCTGAAATCAAGATTCT CCACGGCTCTCTCCCCGTCAGCGAGCAAGACCAGGTGCTCGCTCCATGCC CTGATCGCTGCCGCTGGATTCTGGCCACCAATGTGGCCGAGACCTCCCTG ACGATTCCAGGAGTGAGCTGCGTTATCGACAGCGGGTTGGCCCGTCGCCA TGATCAAAGGCCCGGCAAGGCGGCCCACATCCTTGAGGTGGCTCGCATCT CCCAATTTTCTGCCCGCCAGCGGGCCGGCCGCGCGGGTCGCACCGGCCCC GGCAAGTGCGTGCGCCTCTTCACGCAGGCCGATTTTCACAACCGTCCCGA GGCCGACACGCCCGAAATCTTGCGCACAGACCTGGCGGAGATAGGTCTCT TCCTGGCTCGCTTGAGCGTGTCTCCCCTCGAGCTTCCTTGGCTCGACAGC CCCACATCCGAACGGTGGGAAAGCGCGCTCGGCTTACTGGAAGCCCTGGG GGCCCTCAAGGGCGGAGGTCTCACCGAACTGGGTGGACACATGGCGGATG TGCCCCTGCATCCGCGACTCTCTCGATTTCTTCTCAAGGCCCCCGGCAAG CGCGCGGTCGCGGTTGCCGTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20244:16..1236-

>mRNA_P-wetherbeei_contig20244.1.1 ID=mRNA_P-wetherbeei_contig20244.1.1|Name=mRNA_P-wetherbeei_contig20244.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1221bp|location=Sequence derived from alignment at P-wetherbeei_contig20244:16..1236- (Phaeothamnion wetherbeei SAG_119_79)
GAGGCGCCACCCGGCACCGGCAAGACGACGCGCGTCCCCCCTGCCCTGGC
CGAAGCTTTTCCCGGCGGCAAGATTTTGGTGCTCGAGCCTCGTCGTCTCG
CCGCCCGTTGGTCGAGCCAACGCGTGGCTCAGGAGACCGGAGCCACCTGG
GGGCGAGAAGTTGGCTACCAGGTCCGCTTCGAGGACCGCACGCAAGCAGA
GACCCGCCTCATCTACCTGACGCAGGGCGTTTTTTCGCGTCGACTTCTGC
GCGATCCTGAGCTGAAGGGAATCGCTGTCGTCGTCCTCGATGAATTTCAC
GAGCGTAACCTGGATAACGATCTGGCGCTTGCGTGGCTGGTCCGGCTGCA
CTCGCAGGGGCTCGGGCCGCGTGTACTGGTCATGTCGGCGACTTTGCCCG
CGGGTCTCTCCGAGAAACTGGGCGGCCCTCCGACAGTGATGTGCGAGGCG
CCACTCTTTCCCGTTATCCAGACCTACACAATTCCCCAAGGGACGCTGGA
AAATAGCGTGCGCGAAGCCGTCGAGAAAGAAAGCCCGCGCCAGCCCGGAG
AGCACACTCTGGTCTTCTTGCCAGGGATGCGCGAGATCCGCGCCTGTGAA
CGCGAACTCACCAGTCTGGCCACGCGACGCAAGGCTGAAATCAAGATTCT
CCACGGCTCTCTCCCCGTCAGCGAGCAAGACCAGGTGCTCGCTCCATGCC
CTGATCGCTGCCGCTGGATTCTGGCCACCAATGTGGCCGAGACCTCCCTG
ACGATTCCAGGAGTGAGCTGCGTTATCGACAGCGGGTTGGCCCGTCGCCA
TGATCAAAGGCCCGGCAAGGCGGCCCACATCCTTGAGGTGGCTCGCATCT
CCCAATTTTCTGCCCGCCAGCGGGCCGGCCGCGCGGGTCGCACCGGCCCC
GGCAAGTGCGTGCGCCTCTTCACGCAGGCCGATTTTCACAACCGTCCCGA
GGCCGACACGCCCGAAATCTTGCGCACAGACCTGGCGGAGATAGGTCTCT
TCCTGGCTCGCTTGAGCGTGTCTCCCCTCGAGCTTCCTTGGCTCGACAGC
CCCACATCCGAACGGTGGGAAAGCGCGCTCGGCTTACTGGAAGCCCTGGG
GGCCCTCAAGGGCGGAGGTCTCACCGAACTGGGTGGACACATGGCGGATG
TGCCCCTGCATCCGCGACTCTCTCGATTTCTTCTCAAGGCCCCCGGCAAG
CGCGCGGTCGCGGTTGCCGTC
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