mRNA_P-wetherbeei_contig20236.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20236.1.1
Unique NamemRNA_P-wetherbeei_contig20236.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20236.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20236contigP-wetherbeei_contig20236:243..1226 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1282360.ABAC460_15160
PFAMsDUF4347,HemolysinCabind,Hint_2,VCBS
Model size984
Max annot lvl2|Bacteria
KEGG koko:K01406
KEGG Pathwayko01503,map01503
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.74e-15
EggNOG OGsCOG2931@1|root,COG2931@2|Bacteria
EC3.4.24.40
Descriptioncalcium- and calmodulin-responsive adenylate cyclase activity
Cds size984
COG categoryQ
BRITEko00000,ko00001,ko01000,ko01002
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186194.1408844-CDS-P-wetherbeei_contig20236:242..12261683186194.1408844-CDS-P-wetherbeei_contig20236:242..1226Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20236 243..1226 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20236.1.1prot_P-wetherbeei_contig20236.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20236 243..1226 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20236.1.1

>prot_P-wetherbeei_contig20236.1.1 ID=prot_P-wetherbeei_contig20236.1.1|Name=mRNA_P-wetherbeei_contig20236.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=328bp
ASVDPGTPLDYVVRFDNGAWLRLDSFSMGLSNSGSIGGSSGAGTGKVSVS
DVSLRLGSSAALIDLTHALLSGDQFKTIEIEAYANTGLGKALVDEFRYDN
AQLSSLSTNNGIDNSLTFNYDSFVHGHVDQKSKGAGIPSAEGWDFAANQA
IAAPALPVADAAKILPADEVSPYDQLTYYVKFGTDGWLKLDGFGLGLQNS
STAGSAGGGAGAGKSSASDVGLRLGSSNELLALTDALNKGTHITNVEIES
YLNSGSKGPQLVDEFKFSDVAITSLSSFNATLNALTFDFAQYSHGHVAQD
AKGGTTSSVTGWDFATNTASGGPVPTAD
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mRNA from alignment at P-wetherbeei_contig20236:243..1226+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20236.1.1 ID=mRNA_P-wetherbeei_contig20236.1.1|Name=mRNA_P-wetherbeei_contig20236.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=984bp|location=Sequence derived from alignment at P-wetherbeei_contig20236:243..1226+ (Phaeothamnion wetherbeei SAG_119_79)
GCCAGCGTCGATCCGGGGACGCCGCTGGACTATGTCGTGCGTTTCGACAA
TGGCGCCTGGCTGCGACTCGATTCTTTCAGCATGGGCCTGTCGAACAGCG
GCTCGATTGGAGGCTCAAGCGGAGCGGGTACCGGCAAGGTTTCCGTCTCG
GACGTGAGCCTGCGACTCGGCTCGAGCGCAGCGCTGATCGACCTGACCCA
CGCATTGCTGAGCGGCGATCAGTTCAAGACCATCGAGATCGAGGCCTACG
CGAACACCGGCCTGGGCAAGGCGCTGGTGGACGAATTCCGCTACGACAAT
GCGCAGCTGAGCTCCCTTAGCACCAACAACGGCATCGACAACTCGCTGAC
CTTCAACTACGACAGCTTCGTCCATGGCCATGTCGACCAGAAGTCCAAGG
GTGCGGGCATCCCCAGCGCAGAGGGTTGGGACTTCGCCGCCAACCAGGCC
ATTGCCGCACCGGCACTGCCCGTGGCCGATGCCGCGAAGATACTGCCGGC
AGACGAGGTTTCGCCCTACGACCAGCTCACTTACTACGTGAAATTTGGCA
CGGACGGCTGGCTCAAACTCGATGGGTTCGGATTAGGCCTGCAAAACAGC
AGCACGGCCGGCAGCGCGGGCGGTGGTGCCGGGGCGGGCAAGTCGTCGGC
GTCCGATGTCGGCTTGAGGCTCGGGTCGAGCAATGAACTCCTGGCGCTGA
CTGACGCGCTGAACAAGGGCACCCACATCACCAACGTCGAGATCGAGTCT
TACCTCAATTCGGGCTCGAAGGGACCGCAACTGGTCGACGAGTTCAAGTT
CAGCGACGTGGCGATTACCTCTCTTTCCAGCTTCAATGCGACGCTCAACG
CGTTGACCTTCGACTTCGCCCAGTACAGCCACGGCCATGTTGCGCAGGAC
GCCAAGGGCGGGACGACCAGCAGCGTCACCGGCTGGGACTTTGCGACGAA
CACCGCCTCAGGCGGACCCGTGCCGACCGCCGAT
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20236:243..1226+

>mRNA_P-wetherbeei_contig20236.1.1 ID=mRNA_P-wetherbeei_contig20236.1.1|Name=mRNA_P-wetherbeei_contig20236.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=984bp|location=Sequence derived from alignment at P-wetherbeei_contig20236:243..1226+ (Phaeothamnion wetherbeei SAG_119_79)
GCCAGCGTCGATCCGGGGACGCCGCTGGACTATGTCGTGCGTTTCGACAA
TGGCGCCTGGCTGCGACTCGATTCTTTCAGCATGGGCCTGTCGAACAGCG
GCTCGATTGGAGGCTCAAGCGGAGCGGGTACCGGCAAGGTTTCCGTCTCG
GACGTGAGCCTGCGACTCGGCTCGAGCGCAGCGCTGATCGACCTGACCCA
CGCATTGCTGAGCGGCGATCAGTTCAAGACCATCGAGATCGAGGCCTACG
CGAACACCGGCCTGGGCAAGGCGCTGGTGGACGAATTCCGCTACGACAAT
GCGCAGCTGAGCTCCCTTAGCACCAACAACGGCATCGACAACTCGCTGAC
CTTCAACTACGACAGCTTCGTCCATGGCCATGTCGACCAGAAGTCCAAGG
GTGCGGGCATCCCCAGCGCAGAGGGTTGGGACTTCGCCGCCAACCAGGCC
ATTGCCGCACCGGCACTGCCCGTGGCCGATGCCGCGAAGATACTGCCGGC
AGACGAGGTTTCGCCCTACGACCAGCTCACTTACTACGTGAAATTTGGCA
CGGACGGCTGGCTCAAACTCGATGGGTTCGGATTAGGCCTGCAAAACAGC
AGCACGGCCGGCAGCGCGGGCGGTGGTGCCGGGGCGGGCAAGTCGTCGGC
GTCCGATGTCGGCTTGAGGCTCGGGTCGAGCAATGAACTCCTGGCGCTGA
CTGACGCGCTGAACAAGGGCACCCACATCACCAACGTCGAGATCGAGTCT
TACCTCAATTCGGGCTCGAAGGGACCGCAACTGGTCGACGAGTTCAAGTT
CAGCGACGTGGCGATTACCTCTCTTTCCAGCTTCAATGCGACGCTCAACG
CGTTGACCTTCGACTTCGCCCAGTACAGCCACGGCCATGTTGCGCAGGAC
GCCAAGGGCGGGACGACCAGCAGCGTCACCGGCTGGGACTTTGCGACGAA
CACCGCCTCAGGCGGACCCGTGCCGACCGCCGAT
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