mRNA_P-wetherbeei_contig20223.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20223.1.1
Unique NamemRNA_P-wetherbeei_contig20223.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20223.1.1 vs. uniprot
Match: A0A363TKH2_9BRAD (3-oxoacyl-ACP reductase n=1 Tax=Bradyrhizobiaceae bacterium TaxID=2072420 RepID=A0A363TKH2_9BRAD)

HSP 1 Score: 373 bits (957), Expect = 4.230e-128
Identity = 191/266 (71.80%), Postives = 217/266 (81.58%), Query Frame = 1
Query:    1 MRLDGKIAIIVGGGQGPGEGLGNGRATAMRFAREGAKILVVDRDLASAXXXXXXXXXXXXXXXXXXXXVTNEATLADAIGFAHRRWGRIDILHNNVGVSIAGGDTPLLELTEATFDRISAINLRGTIMACKHVLPVMRAQQSGAIINISSIAAWAEYPLVVYKATKAAMIAFTQQLALQNAVYGIRANVILPGLMDTPMALESRVRASGKSRATIAAERDAQVPLRGKMGTAWDVANAALFLASDEAHFITGVALPVDGGALARIG 798
            MRL+ KIAI+VG GQ PGEGLGNGRATA+RFA+EGAK+  VDR+  SA                    VT+E TLA+A+  A R WGRIDILHNNVGVSIAGGD   L++TE  FDRISAINLRGTIMACKHVLP+MRAQ+SG IINISS+AAW +YP V YKATKAAMIA+T+Q+A+QNA YG+RANVILPGLMDTPMA+++R R SGKSRA IAA R+AQVPLRG+MGTAWDVANAALFLASDEA FITGVALPVDGG L +IG
Sbjct:    1 MRLENKIAIVVGAGQSPGEGLGNGRATALRFAQEGAKVFAVDRNFGSAEETVHAITRAGGTAVPFEADVTDERTLAEAVSAAQRHWGRIDILHNNVGVSIAGGDAGPLDITEEAFDRISAINLRGTIMACKHVLPIMRAQESGVIINISSVAAWHDYPTVAYKATKAAMIAYTRQIAIQNARYGVRANVILPGLMDTPMAVDTRARTSGKSRAEIAAARNAQVPLRGRMGTAWDVANAALFLASDEASFITGVALPVDGGTLVKIG 266          
BLAST of mRNA_P-wetherbeei_contig20223.1.1 vs. uniprot
Match: A0A317H4U1_9PROT (3-oxoacyl-ACP reductase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A317H4U1_9PROT)

HSP 1 Score: 369 bits (946), Expect = 2.140e-126
Identity = 193/266 (72.56%), Postives = 217/266 (81.58%), Query Frame = 1
Query:    1 MRLDGKIAIIVGGGQGPGEGLGNGRATAMRFAREGAKILVVDRDLASAXXXXXXXXXXXXXXXXXXXXVTNEATLADAIGFAHRRWGRIDILHNNVGVSIAGGDTPLLELTEATFDRISAINLRGTIMACKHVLPVMRAQQSGAIINISSIAAWAEYPLVVYKATKAAMIAFTQQLALQNAVYGIRANVILPGLMDTPMALESRVRASGKSRATIAAERDAQVPLRGKMGTAWDVANAALFLASDEAHFITGVALPVDGGALARIG 798
            +RL  KIAIIVG GQ PGEG+GNGRATA+RFAREGAKI  +DR+LASA                    VT+EATLA+A+  A  RWGRIDILHNNVGVSIAGGD   LE+TE  FDRI AINLRGT+MACKH LPVMR Q++G IINISSIAAWA YPLV YKATKA MIA+TQQ+A+QNA +GIRANVILPGLM+TPMA+E+RV+A  K+RA + AERDAQVPLR +MGTAWDVANAALFLASDEA FITGVALPVDGGALAR+G
Sbjct:    3 IRLADKIAIIVGAGQSPGEGMGNGRATALRFAREGAKIFALDRNLASAEETAALVRKEGGECVAFDADVTDEATLAEAMASAVERWGRIDILHNNVGVSIAGGDGSALEITEEAFDRICAINLRGTVMACKHALPVMRKQRAGVIINISSIAAWAGYPLVAYKATKAGMIAYTQQIAIQNAEFGIRANVILPGLMETPMAIENRVKAWNKTRAQVVAERDAQVPLRHRMGTAWDVANAALFLASDEADFITGVALPVDGGALARVG 268          
BLAST of mRNA_P-wetherbeei_contig20223.1.1 vs. uniprot
Match: A0A537QCB1_9PROT (SDR family oxidoreductase n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537QCB1_9PROT)

HSP 1 Score: 365 bits (937), Expect = 4.670e-125
Identity = 188/266 (70.68%), Postives = 213/266 (80.08%), Query Frame = 1
Query:    1 MRLDGKIAIIVGGGQGPGEGLGNGRATAMRFAREGAKILVVDRDLASAXXXXXXXXXXXXXXXXXXXXVTNEATLADAIGFAHRRWGRIDILHNNVGVSIAGGDTPLLELTEATFDRISAINLRGTIMACKHVLPVMRAQQSGAIINISSIAAWAEYPLVVYKATKAAMIAFTQQLALQNAVYGIRANVILPGLMDTPMALESRVRASGKSRATIAAERDAQVPLRGKMGTAWDVANAALFLASDEAHFITGVALPVDGGALARIG 798
            MRL GKIAI+VG GQ PGEGLGNGRAT +RFA+EGA++L VDRDLASA                    VT E TLA A+  A RRWGR+DILH NVGVSI  GD PL E++EA FDRI AINLRG +MA KH +PVMR Q+SG I+N+SS+AAW  YP V YKATKAAMIAFTQQ+A+QNA +GIRANVILPGLMDTPMA+++R R SGKSRA IAA+RDA+VPLR +MGTAWDVANAALFLASDEA+FITGVALPVDGGAL RIG
Sbjct:    1 MRLAGKIAIVVGAGQSPGEGLGNGRATVLRFAQEGARVLAVDRDLASAEETAGLAAKDGGACVAFAADVTQERTLAAAVAEARRRWGRVDILHYNVGVSIGAGDAPLAEISEAVFDRICAINLRGAVMAAKHAVPVMREQRSGVILNVSSVAAWEHYPYVAYKATKAAMIAFTQQVAIQNAEFGIRANVILPGLMDTPMAVDTRARVSGKSRAEIAAQRDARVPLRHRMGTAWDVANAALFLASDEANFITGVALPVDGGALVRIG 266          
BLAST of mRNA_P-wetherbeei_contig20223.1.1 vs. uniprot
Match: A0A537VA82_9PROT (SDR family oxidoreductase n=4 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A537VA82_9PROT)

HSP 1 Score: 365 bits (937), Expect = 4.830e-125
Identity = 191/267 (71.54%), Postives = 216/267 (80.90%), Query Frame = 1
Query:    1 MRLDGKIAIIVGGGQGPGEGLGNGRATAMRFAREGAKILVVDRDLASAXXXXXXXXXXXXXXXXXXXXVTNEATLADAIGFAHRRWGRIDILHNNVGVSIAGGDTPLLELTEATFDRISAINLRGTIMACKHVLPVMRAQQSGAIINISSIAAWAE-YPLVVYKATKAAMIAFTQQLALQNAVYGIRANVILPGLMDTPMALESRVRASGKSRATIAAERDAQVPLRGKMGTAWDVANAALFLASDEAHFITGVALPVDGGALARIG 798
            MRL+GKIAI++G GQ PGEG+GNGRAT +RFA+EGA+IL VDRDLASA                    VT EATLA A+  A  RWGRIDILHNNVGVS+ GGD P+ EL+E  FDR+SAINLRGTIMACKH L +MR Q+SGAI+NISS+AA+   YPLV YK TKA M+AFTQQLALQNA YGIRAN ILPGLMDTPMA+++R RAS +SRA IAAERDA+VPLRGKMGT WDVANAALFLASDEA+FITGVALPVDGGAL +IG
Sbjct:    1 MRLEGKIAIVIGAGQSPGEGIGNGRATVLRFAQEGARILAVDRDLASAEETAALARQEGGECVAFEADVTREATLATAMQSAIDRWGRIDILHNNVGVSVGGGDKPIEELSEEAFDRVSAINLRGTIMACKHALSIMRRQRSGAIVNISSVAAFENSYPLVTYKVTKAGMVAFTQQLALQNAPYGIRANCILPGLMDTPMAVDTRARASNRSRAEIAAERDAKVPLRGKMGTGWDVANAALFLASDEANFITGVALPVDGGALVKIG 267          
BLAST of mRNA_P-wetherbeei_contig20223.1.1 vs. uniprot
Match: A0A535AYI9_9DELT (SDR family oxidoreductase n=2 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A535AYI9_9DELT)

HSP 1 Score: 358 bits (920), Expect = 1.800e-122
Identity = 188/266 (70.68%), Postives = 212/266 (79.70%), Query Frame = 1
Query:    1 MRLDGKIAIIVGGGQGPGEGLGNGRATAMRFAREGAKILVVDRDLASAXXXXXXXXXXXXXXXXXXXXVTNEATLADAIGFAHRRWGRIDILHNNVGVSIAGGDTPLLELTEATFDRISAINLRGTIMACKHVLPVMRAQQSGAIINISSIAAWAEYPLVVYKATKAAMIAFTQQLALQNAVYGIRANVILPGLMDTPMALESRVRASGKSRATIAAERDAQVPLRGKMGTAWDVANAALFLASDEAHFITGVALPVDGGALARIG 798
            MRL+GK AI++G GQGPGEG+GNGRAT +RFA+EGAK++ VDRDL SA                    VT EATLA AI  A +RWG IDILH NVGVSIAGGD PLL+ TE  FDRISAINLRG IMACKHV+P+MR Q++GAI  ISS+AA  +YP V YKATKAAMIAF QQ+A+QNA YGIRANVILPGLMDTPMA+++R R SGKSRA +AAERDA+VPLR KMGTAWDVANAALFLASDEA+FITGVAL VDGGA   IG
Sbjct:    1 MRLEGKTAIVIGAGQGPGEGMGNGRATVLRFAQEGAKVMAVDRDLRSAEETVSMVEQEGGECVAFEADVTKEATLAAAIAAAQKRWGCIDILHYNVGVSIAGGDAPLLDFTEEAFDRISAINLRGAIMACKHVVPIMRQQRAGAITMISSLAALEKYPFVAYKATKAAMIAFIQQVAIQNAEYGIRANVILPGLMDTPMAVDTRARVSGKSRAQVAAERDARVPLRRKMGTAWDVANAALFLASDEANFITGVALLVDGGAALNIG 266          
BLAST of mRNA_P-wetherbeei_contig20223.1.1 vs. uniprot
Match: A0A1Q7BR90_9PROT (3-oxoacyl-ACP reductase n=5 Tax=unclassified Alphaproteobacteria TaxID=33807 RepID=A0A1Q7BR90_9PROT)

HSP 1 Score: 355 bits (912), Expect = 2.960e-121
Identity = 185/265 (69.81%), Postives = 208/265 (78.49%), Query Frame = 1
Query:    1 MRLDGKIAIIVGGGQGPGEGLGNGRATAMRFAREGAKILVVDRDLASAXXXXXXXXXXXXXXXXXXXXVTNEATLADAIGFAHRRWGRIDILHNNVGVSIAGGDTPLLELTEATFDRISAINLRGTIMACKHVLPVMRAQQSGAIINISSIAAWAEYPLVVYKATKAAMIAFTQQLALQNAVYGIRANVILPGLMDTPMALESRVRASGKSRATIAAERDAQVPLRGKMGTAWDVANAALFLASDEAHFITGVALPVDGGALARI 795
            MRL  KIAI+VG GQ PGEG+GNGRAT +RF +EGAK+L VD +LASA                    VT E TLA     A RRWGRID+LH NVGVSIAGGD PL E++E   DRI  INLRG IMACKHVLP+MRAQ+SG II ISS+AAW +YP V YKA+KAAMIAFTQQ+A+QNA +GIRANVILPGLMDTPMA+++R RASGKSRA +AA RDA+VPLR KMGTAWDVANAALFLASDEA+FITGVALPVDGGAL  I
Sbjct:    1 MRLKDKIAIVVGAGQSPGEGMGNGRATVLRFVQEGAKVLAVDNNLASAEETVAMVRQSGGECAAFEADVTKETTLAAMAEAARRRWGRIDVLHYNVGVSIAGGDAPLAEISETAVDRIMTINLRGAIMACKHVLPIMRAQRSGVIITISSVAAWEQYPNVAYKASKAAMIAFTQQIAIQNAEFGIRANVILPGLMDTPMAVDTRARASGKSRADVAASRDARVPLRHKMGTAWDVANAALFLASDEANFITGVALPVDGGALVHI 265          
BLAST of mRNA_P-wetherbeei_contig20223.1.1 vs. uniprot
Match: A0A537NKP8_9PROT (SDR family oxidoreductase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537NKP8_9PROT)

HSP 1 Score: 352 bits (902), Expect = 9.840e-120
Identity = 184/265 (69.43%), Postives = 208/265 (78.49%), Query Frame = 1
Query:    1 MRLDGKIAIIVGGGQGPGEGLGNGRATAMRFAREGAKILVVDRDLASAXXXXXXXXXXXXXXXXXXXXVTNEATLADAIGFAHRRWGRIDILHNNVGVSIAGGDTPLLELTEATFDRISAINLRGTIMACKHVLPVMRAQQSGAIINISSIAAWAEYPLVVYKATKAAMIAFTQQLALQNAVYGIRANVILPGLMDTPMALESRVRASGKSRATIAAERDAQVPLRGKMGTAWDVANAALFLASDEAHFITGVALPVDGGALARI 795
            MRL  KIAI+VG GQ PGEGLGNGRAT +RFA EGAK+L VD D+ SA                    V NE TLA     A +RWGRIDILH NVGVSIAGGD PL E+TE  FDRI++INLRG IMACK V+P+MRAQ+SG I+ ISS+AAW +YP V YKATKAAMIAFTQQLA+QNA +GIRANVILPGLMDTPMA+++R R SGK+RA +A+ RDA+VPLR KMGTAWDVANAALFLASDEA+FITGVALPVDGGAL  I
Sbjct:    1 MRLKDKIAIVVGAGQSPGEGLGNGRATVLRFAEEGAKVLAVDNDIRSADETVGMARAGGGECAAFEADVRNEKTLAAMAQDARQRWGRIDILHYNVGVSIAGGDAPLDEITEEAFDRIASINLRGAIMACKQVVPIMRAQRSGVILTISSVAAWEQYPNVAYKATKAAMIAFTQQLAIQNAQFGIRANVILPGLMDTPMAVDTRARTSGKTRAEVASARDARVPLRHKMGTAWDVANAALFLASDEANFITGVALPVDGGALVHI 265          
BLAST of mRNA_P-wetherbeei_contig20223.1.1 vs. uniprot
Match: A0A5C8PJ33_9HYPH (SDR family oxidoreductase n=2 Tax=Hyphomicrobiales TaxID=356 RepID=A0A5C8PJ33_9HYPH)

HSP 1 Score: 344 bits (883), Expect = 7.620e-117
Identity = 179/266 (67.29%), Postives = 205/266 (77.07%), Query Frame = 1
Query:    1 MRLDGKIAIIVGGGQGPGEGLGNGRATAMRFAREGAKILVVDRDLASAXXXXXXXXXXXXXXXXXXXXVTNEATLADAIGFAHRRWGRIDILHNNVGVSIAGGDTPLLELTEATFDRISAINLRGTIMACKHVLPVMRAQQSGAIINISSIAAWAEYPLVVYKATKAAMIAFTQQLALQNAVYGIRANVILPGLMDTPMALESRVRASGKSRATIAAERDAQVPLRGKMGTAWDVANAALFLASDEAHFITGVALPVDGGALARIG 798
            MRL  KIAI+VG GQ         RATA+RFA+EGAK+L VDR LASA                    VT EA LA  +  A RRWGRIDILHNNVGVSI+GGD P  E+TE  FDR+ AINLRGT+MACKHVLP+MR QQ+G IINISS+AAW +YP V YKATK+AMIAFT+QLA+QNA YG+RANVILPGLMDTPMA+++R R   +SRA +AAERDA+VPLR KMGTAWDVANAALFLASDEA+FITGVALPVDGG+  R+G
Sbjct:    1 MRLANKIAIVVGAGQXXXXXXXXXRATALRFAQEGAKVLSVDRSLASAQETADMIAKAGGTAAAFEADVTKEAMLAAMVADAQRRWGRIDILHNNVGVSISGGDAPPTEITEEAFDRVVAINLRGTVMACKHVLPIMRQQQAGVIINISSMAAWTDYPFVAYKATKSAMIAFTEQLAIQNAPYGVRANVILPGLMDTPMAVDTRARTGNRSRADVAAERDAKVPLRRKMGTAWDVANAALFLASDEANFITGVALPVDGGSSVRVG 266          
BLAST of mRNA_P-wetherbeei_contig20223.1.1 vs. uniprot
Match: UPI001081FEF7 (SDR family oxidoreductase n=1 Tax=Crenalkalicoccus roseus TaxID=1485588 RepID=UPI001081FEF7)

HSP 1 Score: 340 bits (872), Expect = 3.590e-115
Identity = 175/266 (65.79%), Postives = 206/266 (77.44%), Query Frame = 1
Query:    1 MRLDGKIAIIVGGGQGPGEGLGNGRATAMRFAREGAKILVVDRDLASAXXXXXXXXXXXXXXXXXXXXVTNEATLADAIGFAHRRWGRIDILHNNVGVSIAGGDTPLLELTEATFDRISAINLRGTIMACKHVLPVMRAQQSGAIINISSIAAWAEYPLVVYKATKAAMIAFTQQLALQNAVYGIRANVILPGLMDTPMALESRVRASGKSRATIAAERDAQVPLRGKMGTAWDVANAALFLASDEAHFITGVALPVDGGALARIG 798
            MRL  +IA+++G GQGPG+G+GNGRATA+RFA+EGA++L  DRDLASA                     T EATLA A+  A RRWGR+D+LH NVGVSIAGGD P  E+TE  FDRI+AINLRG +M+ KH LPVMR QQSG I++ISS AA   YP V YK TKAAM+AFT+Q+A+QNA YGIR N ILPGLMDTPMA+++R RA+G+ R  +AAERDA+VPLR +MGTAWDVANAALFLASDEA FITGVALPVDGG L RIG
Sbjct:    1 MRLKDRIALVIGAGQGPGQGIGNGRATALRFAQEGARVLCADRDLASAEETVRMIAEAGGESAAFEADATREATLAAAVAEAVRRWGRLDVLHYNVGVSIAGGDAPPEEITEEAFDRITAINLRGFVMSVKHALPVMRRQQSGVILSISSAAAVESYPYVAYKCTKAAMVAFTEQVAIQNAEYGIRCNTILPGLMDTPMAVDTRARATGRPREEVAAERDAKVPLRRRMGTAWDVANAALFLASDEAGFITGVALPVDGGRLVRIG 266          
BLAST of mRNA_P-wetherbeei_contig20223.1.1 vs. uniprot
Match: A0A1T4NAS9_9HYPH (NAD(P)-dependent dehydrogenase, short-chain alcohol dehydrogenase family n=1 Tax=Enhydrobacter aerosaccus TaxID=225324 RepID=A0A1T4NAS9_9HYPH)

HSP 1 Score: 338 bits (867), Expect = 2.060e-114
Identity = 180/266 (67.67%), Postives = 203/266 (76.32%), Query Frame = 1
Query:    1 MRLDGKIAIIVGGGQGPGEGLGNGRATAMRFAREGAKILVVDRDLASAXXXXXXXXXXXXXXXXXXXXVTNEATLADAIGFAHRRWGRIDILHNNVGVSIAGGDTPLLELTEATFDRISAINLRGTIMACKHVLPVMRAQQSGAIINISSIAAWAEYPLVVYKATKAAMIAFTQQLALQNAVYGIRANVILPGLMDTPMALESRVRASGKSRATIAAERDAQVPLRGKMGTAWDVANAALFLASDEAHFITGVALPVDGGALARIG 798
            MRL  K+AI+VG GQ PGEG GNGRATA+ FAREGAK+L VDRDL SA                    VT    L D +  A R WGRIDILHNNVGVS+AGGD  LLE+T+  FDR  AINLRGTIMACKHV+PVMR Q+SGAI+NISS+AA   YP V YKATK+AMIAFT+QLA QNA YG+RANVILPGLM+TPMA+++R R   KSRA + AERDA+VPLRGKMGTA DVANAALFLASDEA+FITGV LPVDGGA  + G
Sbjct:    1 MRLKDKVAIVVGAGQSPGEGTGNGRATALTFAREGAKVLCVDRDLESAQETVKMITDGDGYAEGFRADVTRSDQLKDMVEEAQRLWGRIDILHNNVGVSLAGGDAELLEITDEAFDRCVAINLRGTIMACKHVIPVMRRQKSGAIVNISSMAAITTYPYVAYKATKSAMIAFTEQLAYQNARYGVRANVILPGLMNTPMAVDTRARTFKKSRAEVEAERDAKVPLRGKMGTARDVANAALFLASDEANFITGVTLPVDGGASVQTG 266          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20223.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A363TKH2_9BRAD4.230e-12871.803-oxoacyl-ACP reductase n=1 Tax=Bradyrhizobiaceae ... [more]
A0A317H4U1_9PROT2.140e-12672.563-oxoacyl-ACP reductase n=1 Tax=Proteobacteria bac... [more]
A0A537QCB1_9PROT4.670e-12570.68SDR family oxidoreductase n=2 Tax=Alphaproteobacte... [more]
A0A537VA82_9PROT4.830e-12571.54SDR family oxidoreductase n=4 Tax=unclassified Alp... [more]
A0A535AYI9_9DELT1.800e-12270.68SDR family oxidoreductase n=2 Tax=Deltaproteobacte... [more]
A0A1Q7BR90_9PROT2.960e-12169.813-oxoacyl-ACP reductase n=5 Tax=unclassified Alpha... [more]
A0A537NKP8_9PROT9.840e-12069.43SDR family oxidoreductase n=1 Tax=Alphaproteobacte... [more]
A0A5C8PJ33_9HYPH7.620e-11767.29SDR family oxidoreductase n=2 Tax=Hyphomicrobiales... [more]
UPI001081FEF73.590e-11565.79SDR family oxidoreductase n=1 Tax=Crenalkalicoccus... [more]
A0A1T4NAS9_9HYPH2.060e-11467.67NAD(P)-dependent dehydrogenase, short-chain alcoho... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20223contigP-wetherbeei_contig20223:420..1220 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1380394.JADL01000001_gene2359
PFAMsadh_short_C2
Model size801
Max annot lvl204441|Rhodospirillales
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.39e-127
EggNOG OGsCOG1028@1|root,COG1028@2|Bacteria,1MUFX@1224|Proteobacteria,2TRWN@28211|Alphaproteobacteria,2JWA5@204441|Rhodospirillales
DescriptionEnoyl-(Acyl carrier protein) reductase
Cds size801
COG categoryIQ
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186193.9450574-CDS-P-wetherbeei_contig20223:419..12201683186193.9450574-CDS-P-wetherbeei_contig20223:419..1220Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20223 420..1220 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20223.1.1prot_P-wetherbeei_contig20223.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20223 420..1220 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20223.1.1

>prot_P-wetherbeei_contig20223.1.1 ID=prot_P-wetherbeei_contig20223.1.1|Name=mRNA_P-wetherbeei_contig20223.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=267bp
MRLDGKIAIIVGGGQGPGEGLGNGRATAMRFAREGAKILVVDRDLASARE
TADLVAKEGAEGVPFEADVTNEATLADAIGFAHRRWGRIDILHNNVGVSI
AGGDTPLLELTEATFDRISAINLRGTIMACKHVLPVMRAQQSGAIINISS
IAAWAEYPLVVYKATKAAMIAFTQQLALQNAVYGIRANVILPGLMDTPMA
LESRVRASGKSRATIAAERDAQVPLRGKMGTAWDVANAALFLASDEAHFI
TGVALPVDGGALARIG*
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mRNA from alignment at P-wetherbeei_contig20223:420..1220-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20223.1.1 ID=mRNA_P-wetherbeei_contig20223.1.1|Name=mRNA_P-wetherbeei_contig20223.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=801bp|location=Sequence derived from alignment at P-wetherbeei_contig20223:420..1220- (Phaeothamnion wetherbeei SAG_119_79)
ATGCGCCTCGACGGAAAAATAGCGATCATCGTCGGCGGCGGCCAGGGTCC GGGCGAAGGTCTTGGCAATGGCCGCGCGACGGCAATGCGTTTTGCCCGGG AAGGCGCGAAAATTCTCGTGGTGGACAGGGATCTCGCGTCAGCGCGCGAA ACCGCCGACCTGGTCGCGAAAGAAGGCGCGGAAGGCGTGCCGTTCGAGGC GGACGTGACCAACGAAGCCACGCTCGCCGACGCGATCGGCTTCGCTCACA GACGCTGGGGCCGCATCGACATCCTGCACAACAACGTCGGCGTGAGCATT GCGGGCGGCGACACGCCGCTCCTGGAACTAACCGAGGCGACGTTCGATCG CATCAGCGCCATCAATTTGCGCGGCACCATCATGGCCTGCAAGCACGTGC TGCCCGTCATGCGCGCGCAGCAAAGCGGCGCCATCATCAACATCTCGTCC ATCGCGGCGTGGGCGGAGTATCCGCTCGTCGTCTACAAGGCCACCAAGGC GGCGATGATCGCCTTTACGCAACAGCTGGCGCTGCAGAATGCGGTCTATG GCATCCGCGCAAACGTCATCCTGCCGGGGTTGATGGATACGCCGATGGCG CTCGAGAGCCGCGTGCGCGCCAGCGGCAAGTCCCGCGCGACAATTGCGGC CGAGCGCGACGCCCAGGTGCCGCTGCGCGGCAAGATGGGCACGGCATGGG ATGTTGCCAACGCCGCCCTGTTCCTCGCCTCCGACGAAGCCCACTTCATC ACCGGCGTGGCCCTGCCGGTCGACGGCGGCGCGCTGGCGCGTATCGGCTA G
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20223:420..1220-

>mRNA_P-wetherbeei_contig20223.1.1 ID=mRNA_P-wetherbeei_contig20223.1.1|Name=mRNA_P-wetherbeei_contig20223.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=801bp|location=Sequence derived from alignment at P-wetherbeei_contig20223:420..1220- (Phaeothamnion wetherbeei SAG_119_79)
ATGCGCCTCGACGGAAAAATAGCGATCATCGTCGGCGGCGGCCAGGGTCC
GGGCGAAGGTCTTGGCAATGGCCGCGCGACGGCAATGCGTTTTGCCCGGG
AAGGCGCGAAAATTCTCGTGGTGGACAGGGATCTCGCGTCAGCGCGCGAA
ACCGCCGACCTGGTCGCGAAAGAAGGCGCGGAAGGCGTGCCGTTCGAGGC
GGACGTGACCAACGAAGCCACGCTCGCCGACGCGATCGGCTTCGCTCACA
GACGCTGGGGCCGCATCGACATCCTGCACAACAACGTCGGCGTGAGCATT
GCGGGCGGCGACACGCCGCTCCTGGAACTAACCGAGGCGACGTTCGATCG
CATCAGCGCCATCAATTTGCGCGGCACCATCATGGCCTGCAAGCACGTGC
TGCCCGTCATGCGCGCGCAGCAAAGCGGCGCCATCATCAACATCTCGTCC
ATCGCGGCGTGGGCGGAGTATCCGCTCGTCGTCTACAAGGCCACCAAGGC
GGCGATGATCGCCTTTACGCAACAGCTGGCGCTGCAGAATGCGGTCTATG
GCATCCGCGCAAACGTCATCCTGCCGGGGTTGATGGATACGCCGATGGCG
CTCGAGAGCCGCGTGCGCGCCAGCGGCAAGTCCCGCGCGACAATTGCGGC
CGAGCGCGACGCCCAGGTGCCGCTGCGCGGCAAGATGGGCACGGCATGGG
ATGTTGCCAACGCCGCCCTGTTCCTCGCCTCCGACGAAGCCCACTTCATC
ACCGGCGTGGCCCTGCCGGTCGACGGCGGCGCGCTGGCGCGTATCGGCTA
G
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