mRNA_P-wetherbeei_contig2022.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig2022.1.1
Unique NamemRNA_P-wetherbeei_contig2022.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig2022.1.1 vs. uniprot
Match: D7FK35_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FK35_ECTSI)

HSP 1 Score: 297 bits (761), Expect = 8.630e-89
Identity = 227/465 (48.82%), Postives = 272/465 (58.49%), Query Frame = 1
Query:  223 QGAGKKGAPATKDVHEDDDVLLDEAIQSIAIAANQASSAGNGNDGGADDV------PYSAAFQCDTRNLSIAKELRQRFGGAAXXXXXXXXXXXXXXXXXXXXXXX-----------------MMAGAM-RKLLLGLPADDWPKPPSFIGGGLGMVK--TAAPAYLPPWQAAAHGAGCTWFAFQASDVYKQLQASFLAQARYELAQATMDPNVLVVFASQSPHHAEALLQLGMVLAHTGQMDRASDLVRRCLYVVECAYAEGFGAAVARGAARLDACLPENATYFAALFRHMQMAGMRGCPRTAAEVCRLLLSLDPLGDPNGALLFLDHFALASKQPDLILALHDSGLPIGLAPGALATSATAGAASGDAXXXVEXXSPAAGGGVPAAPGVTVADLPGLNFSRAIALLDKNGKDRLAALSAMRDALLSFPAAVEPLLSKAGIDVRSTRNAHNWGGVLRHRLFASA 1539
            +G  K+ AP  +D   DDD  LD  I  +A  A  A+ AG G+    D++      P +   +CD R L + +ELR++FGG  XXXXXXXXXXXXXXXXXXXXXXX                 + A  M ++L++  P DDWPKPPSF+GGGLGM +    APAYLP WQ  AH  G  WF F+ S   +QLQ  F      E  Q   DPN L  FAS++P+HA+ALLQLGMV AHTGQMDRAS+ V R LYV+E A  E F      GA RLDA L  N TYFAA+FRHMQMAGM G  RTA EV RLLLSLDPLGDP G LL LD  AL S+Q   ++ LH S LP+G +P   A +  +GA                  GV    GVTV DLPGL+ S  +A LD  G D  AA  AM   +L FP  +EPLL K G+  RST   H+W  V++H  F  A
Sbjct:   99 EGGRKQTAPGVED---DDDEYLDSIISELARKA-AAAEAGEGSP--TDNLKLGASSPLALLLRCDPRCLKLDQELRRKFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSASLMLKRLVVSAPKDDWPKPPSFVGGGLGMKRCEAGAPAYLPRWQLDAHQ-GAEWFVFERSSSLEQLQRKF------EAIQGMHDPNFLASFASRAPYHADALLQLGMVFAHTGQMDRASEFVGRSLYVLESATMEAFRPV--DGACRLDATLEVNKTYFAAMFRHMQMAGMVGGARTALEVGRLLLSLDPLGDPMGCLLALDSHALTSRQGGFLIELHRSKLPVGRSPSRAAEAFASGA------------------GVDGDVGVTVQDLPGLSMSVCLATLDTTG-DSTAAREAMASTMLRFPIMLEPLLEKCGVTPRSTTYPHDWKSVMQHPHFGRA 529          
BLAST of mRNA_P-wetherbeei_contig2022.1.1 vs. uniprot
Match: A0A6H5LA68_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LA68_9PHAE)

HSP 1 Score: 285 bits (728), Expect = 4.570e-86
Identity = 176/338 (52.07%), Postives = 209/338 (61.83%), Query Frame = 1
Query:  538 MRKLLLGLPADDWPKPPSFIGGGLGMVK--TAAPAYLPPWQAAAHGAGCTWFAFQASDVYKQLQASFLAQARYELAQATMDPNVLVVFASQSPHHAEALLQLGMVLAHTGQ--MDRASDLVRRCLYVVECAYAEGFGAAVARGAARLDACLPENATYFAALFRHMQMAGMRGCPRTAAEVCRLLLSLDPLGDPNGALLFLDHFALASKQPDLILALHDSGLPIGLAPGALATSATAGAASGDAXXXVEXXSPAAGGGVPAAPGVTVADLPGLNFSRAIALLDKNGKDRLAALSAMRDALLSFPAAVEPLLSKAGIDVRSTRNAHNWGGVLRHRLFASA 1539
            +++L++  P +DWPKPPSF+GGGLGM +    APAYLP WQ  AH  G  WF F+ S   +QLQ  F      E  Q   DPN L  FAS++P+HA+ALLQLGMV AHTGQ  MDRAS+ V R LYV+E A  E F      GA RLDA L  N TYFAA+FRHMQMAGM G  RTA EVCRLLLSLDPLGDP G LL LD  ALAS+Q + ++ LH S LP+G +P   A +  +GA        V+       GGV     VTV DLPGL+ S  +A LD  G D  AA  AM   LL FP  +EPLL K G+  RST   H+W  V++H  F  A
Sbjct:   18 LKRLVVSAPKEDWPKPPSFVGGGLGMKRCEAGAPAYLPKWQLDAHQ-GAEWFVFERSSSLEQLQRKF------EAIQGMHDPNFLASFASRAPYHADALLQLGMVFAHTGQASMDRASEFVGRSLYVLESATMEAFRPV--DGACRLDATLEVNKTYFAAMFRHMQMAGMVGGARTALEVCRLLLSLDPLGDPMGCLLALDSHALASRQGEFLIELHRSKLPVGRSPSRAAEAFASGA-------DVD-------GGVC----VTVQDLPGLSMSVCLATLDTTG-DSTAAREAMASTLLRFPIMLEPLLEKCGVTPRSTTYPHDWKSVMQHPHFGRA 327          
BLAST of mRNA_P-wetherbeei_contig2022.1.1 vs. uniprot
Match: A0A835ZGE8_9STRA (Transcriptional repressor TCF25-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGE8_9STRA)

HSP 1 Score: 267 bits (683), Expect = 2.250e-77
Identity = 169/334 (50.60%), Postives = 200/334 (59.88%), Query Frame = 1
Query:  568 DDWPKPPSFIGGGLGMVKTAAPAYLPPWQAAAHGAGCTWFAFQASDVYKQLQASFLAQARYELAQATMDPNVLVVFASQSPHHAEALLQLGMVLAHTGQMDRASDLVRRCLYVVECAYAEGFGAAVARGAARLDACLPENATYFAALFRHMQMAGMRGCPRTAAEVCRLLLSLDPLGDPNGALLFLDHFALASKQPDLILALHDSGLPIGLAPGALATSATAGAASG--------DAXXXVEXXSPAAGGGVP-AAPGVTVADLPGLNFSRAIALLDKNGKDRLAALSAMRDALLSFPAAVEPLLSKAGID-VRSTRNAHNWGGVLRHRLFASA 1539
            +DW +PPS +GGGLGM + A PA+LP  Q AAHG G  WFA++ S+ Y +      AQ R+E AQAT DPN + +   Q+PHHA+ALLQLGMV AHTGQMD AS+ VRRCLYV+ECA  E     +A G  R+D   P NAT F ALFRH Q   M GC RTA EV  LLLSLDP+GDP GALL +D  ALA K+   +L+L  SGLPIG +P  L     A   S         D        S A G  V   AP VTVADLPGL  S A+A LD    D  AA +A R AL  FPAA+EPLL+ AG    R+  +  +W  V R   F  A
Sbjct:  235 EDWSRPPSLVGGGLGMERAAPPAWLPRRQRAAHGGGAQWFAYRWSEEYAR------AQQRFEAAQATADPNNVALLLWQAPHHADALLQLGMVYAHTGQMDHASEFVRRCLYVLECAVLEP--CKLASGRVRMDVTHPPNATLFGALFRHAQQCSMMGCRRTAMEVSHLLLSLDPIGDPMGALLCVDCHALACKEGRFVLSLAASGLPIGFSPALLEMDWAARGGSXXXXXXXALDPSDASPDTSTAGGSDVSDGAPLVTVADLPGLALSAALAHLDAG--DAAAARAAARRALRRFPAALEPLLAAAGAPHARTQAHPVDWKSVFRSAHFGGA 558          
BLAST of mRNA_P-wetherbeei_contig2022.1.1 vs. uniprot
Match: A0A5D6XJL8_9STRA (EDR2_C domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XJL8_9STRA)

HSP 1 Score: 193 bits (491), Expect = 6.710e-50
Identity = 132/349 (37.82%), Postives = 178/349 (51.00%), Query Frame = 1
Query:  532 GAMRKLLLGLPADDWPKPPSFIGGGLGMVKTAAPAYLPPWQAAAHGAGCTWFAFQASDVYKQLQASFLAQARYELAQATMDPNVLVVFASQSPHHAEALLQLGMVLAHTGQMDRASDLVRRCLYVVECAYAEGFGAAVARGAARLDACLPENATYFAALFRHMQMAGMRGCPRTAAEVCRLLLSLDPLGDPNGALLFLDHFALASKQPDLILALHDSGLPIGLAPGALATSATAGAASGDAXXXVEXXSPAAGGGVPA-APGV------------TVADLPGLNFSRAIALLDKNGKDRLAALSAMRDALLSFPAAVEPLLSKAGIDVRSTRNAHNWGGVLRHRLFASA 1539
            G  RK+ +  P D+WP+PP+F+GGG+   +   PA  P W +A H    TW     S  YK+      A   +EL Q T DPN++  F  + P+H +ALLQ+  V  H GQMD A+D ++RC+Y +E A+A+ F   VARG  R+D     NA +F ALF  M+  G RGC R+A E  +LLL LDPLGDP   LL +D++AL S+Q   IL LH +                       A   V+   PA  G  P  +PGV            +V+ LP L FS A+A       D  AA   +  ALL FP+ ++PLL K   +  S      W  VL  R+FA+A
Sbjct:  390 GTTRKVQIVTPLDEWPRPPTFVGGGIRWTRANKPAG-PGWSSACHYFEVTW-----SIAYKK------AHEEFELVQRTHDPNIMGHFLQRYPYHIDALLQMSEVFQHHGQMDHAADCIKRCMYALELAWADQFD--VARGECRMDISTEHNAGFFRALFLLMKQVGRRGCMRSAFETAKLLLGLDPLGDPMHVLLAVDYYALTSRQCQFILDLHAA-----------------------AQEAVDRFPPADAGSAPKKSPGVVKAGTTRSDKAASVSALPNLQFSLALAHFFMGNAD--AAKEQLAKALLQFPSVLKPLLEKISANTSSA----TWKPVLASRVFANA 695          
BLAST of mRNA_P-wetherbeei_contig2022.1.1 vs. uniprot
Match: A0A6G0PRE5_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6G0PRE5_9STRA)

HSP 1 Score: 187 bits (474), Expect = 2.300e-48
Identity = 124/341 (36.36%), Postives = 181/341 (53.08%), Query Frame = 1
Query:  535 AMRKLLLGLPADDWPKPPSFIGGGLGMVKTAAPAYLPPWQAAAHGAGCTWFAFQASDVYKQLQASFLAQARYELAQATMDPNVLVVFASQSPHHAEALLQLGMVLAHTGQMDRASDLVRRCLYVVECAYAEGFGAAVARGAARLDACLPENATYFAALFRHMQMAGMRGCPRTAAEVCRLLLSLDPLGDPNGALLFLDHFALASKQPDLILALHDSGLPI--GLAPGALATSATAGAASGDAXXXVEXXSPAAGGGVPAAPGVTVADLPGLNFSRAIALL----DKNGKDRLAALSAMRDALLSFPAAVEPLLSKAGIDVRSTRNAHNWGGVLRHRLFASA 1539
            A +K+++  P D+WP+PP+F+GGG+   ++  P      + A   + C +F    S  YK+LQ  F      EL Q T DPN++  F  + P+H +ALL +  V  H GQMD A+D ++RC+YV+E A+A+ F   V++G  R+D     NA +F ALF  M+  G RGC R+A E  +LLLSLDP GDP   LL +D++AL S+Q   ++ L DS  P     A G +A+   AG  +  A                     T+A LP L FS A+A      +   KD LAA      ALL FP  ++P L K    + +  ++ +W  +L  R+FA+A
Sbjct:  215 ATKKVMMVSPLDEWPRPPTFVGGGIRWTRSNKP------KGAGWNSLCNYFEITWSIAYKKLQEEF------ELLQRTHDPNLIAHFLQRYPYHIDALLTMSEVFQHHGQMDHATDSIKRCMYVLELAWADQFD--VSKGNCRMDIQTEHNAGFFKALFLLMKQVGRRGCMRSAFETAKLLLSLDPQGDPMNVLLAIDYYALTSRQCQFLIDLFDSKTPAVDRFASGEVASKKKAGKKASSADE-------------------TIAALPNLQFSLALAHFFLGNETEAKDLLAA------ALLKFPTMLKPFLEK----IAANPSSSSWQPILSSRVFANA 512          
BLAST of mRNA_P-wetherbeei_contig2022.1.1 vs. uniprot
Match: A0A067CHL9_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CHL9_SAPPC)

HSP 1 Score: 181 bits (460), Expect = 1.340e-46
Identity = 118/334 (35.33%), Postives = 174/334 (52.10%), Query Frame = 1
Query:  541 RKLLLGLPADDWPKPPSFIGGGLGMVKTAAPAYLPPWQAAAHGAGCTWFAFQASDVYKQLQASFLAQARYELAQATMDPNVLVVFASQSPHHAEALLQLGMVLAHTGQMDRASDLVRRCLYVVECAYAEGFGAAVARGAARLDACLPENATYFAALFRHMQMAGMRGCPRTAAEVCRLLLSLDPLGDPNGALLFLDHFALASKQPDLILALHDSGLPIGLAPGALATSATAGAASGDAXXXVEXXSPAAGGGVPAAPG-VTVADLPGLNFSRAIALLDKNGKDRLAALSAMRDALLSFPAAVEPLLSKAGIDVRSTRNAHNWGGVLRHRLFASA 1539
            +K++L  P D WP+PP+F+GGG+   +   PA  P W       GC +F    S  YK++Q  F      ++ Q+T DPN +  F ++ P+H +ALLQ+  V  H GQMD ++D +++C+Y +E A+ E +   VA G AR+D    +NA YF ALF  M+  G RGC R+A E+ +L+ S+DP GDP   LL LD++ALA++Q   +L L+ S   + +  G+ A                          VP  P   TV  LPGL FS A+A+     +    A  A+  AL  +P  ++PL  K GI   S      W  VL   +FA++
Sbjct:  172 KKVVLVTPDDTWPRPPTFVGGGIRWTRVDKPA-CPSWDL-----GCDYFQVDWSLTYKKMQEQF------QVLQSTHDPNAIGHFLAKHPYHVDALLQMSEVFQHHGQMDHSADCIKKCVYFLELAWGEQYD--VANGTARMDIHAGDNAAYFRALFFLMKQVGRRGCVRSAFEIAKLIWSMDPKGDPMHVLLCLDYYALAARQCQFVLDLYASHTEVVVRTGSAA--------------------------VPTQPASATVDALPGLQFSAALAMYHLGNE--ADATDALARALAKYPRVLKPLTDKCGISTTSKA----WQDVLCSAVFANS 459          
BLAST of mRNA_P-wetherbeei_contig2022.1.1 vs. uniprot
Match: G4YZT6_PHYSP (Uncharacterized protein n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4YZT6_PHYSP)

HSP 1 Score: 184 bits (468), Expect = 1.710e-46
Identity = 126/339 (37.17%), Postives = 181/339 (53.39%), Query Frame = 1
Query:  535 AMRKLLLGLPADDWPKPPSFIGGGLGMVKTAAPAYLPPWQAAAHGAGCTWFAFQASDVYKQLQASFLAQARYELAQATMDPNVLVVFASQSPHHAEALLQLGMVLAHTGQMDRASDLVRRCLYVVECAYAEGFGAAVARGAARLDACLPENATYFAALFRHMQMAGMRGCPRTAAEVCRLLLSLDPLGDPNGALLFLDHFALASKQPDLILALHDSGLPIGLAPGALATSATAGAASGDAXXXVEXXSPAAGGGVPAAPGVTVADLPGLNFSRAIALL----DKNGKDRLAALSAMRDALLSFPAAVEPLLSKAGIDVRSTRNAHNWGGVLRHRLFASA 1539
            A +K+++  P D+WP+PP+F+GGG+   ++  P      + A   + C +F    S  YK+LQ  F      EL Q T DPN++  F  + P+H +ALL +  V  H GQMD ASD ++RC+YV+E A+A+ F   V++G  R+D     NA +F ALF  M+  G RGC R+A E  +LLLSLDP GDP   LL +D++AL S+Q   ++ L  S  P   A   LA+S              E  S    G   ++   T+A LP L  S A+A      +   KD LAA      ALL FP  ++PLL K  ++  S+    +W  +L  R+FA+A
Sbjct:  656 ATKKVMMVTPLDEWPRPPTFVGGGIRWTRSNKP------KGAGWNSLCNYFEITWSIAYKKLQEEF------ELLQRTHDPNLIAHFLQRYPYHIDALLTMSEVFQHHGQMDHASDCIKRCMYVLELAWADQFD--VSKGNCRMDIQTEHNAGFFRALFLLMKQVGRRGCMRSAFETAKLLLSLDPQGDPMNVLLAIDYYALTSRQCRFLIDLFGSKTP---AVDRLASS--------------EAASKKKAGKKTSSADETIAALPNLQISLALAHFFLGNETEAKDLLAA------ALLKFPTMLKPLLEKIAVNPSSS----SWQPILSSRVFANA 953          
BLAST of mRNA_P-wetherbeei_contig2022.1.1 vs. uniprot
Match: A0A329SI05_9STRA (Calcium-dependent protein kinase 17 n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329SI05_9STRA)

HSP 1 Score: 182 bits (462), Expect = 1.080e-45
Identity = 123/337 (36.50%), Postives = 181/337 (53.71%), Query Frame = 1
Query:  541 RKLLLGLPADDWPKPPSFIGGGLGMVKTAAPAYLPPWQAAAHGAGCTWFAFQASDVYKQLQASFLAQARYELAQATMDPNVLVVFASQSPHHAEALLQLGMVLAHTGQMDRASDLVRRCLYVVECAYAEGFGAAVARGAARLDACLPENATYFAALFRHMQMAGMRGCPRTAAEVCRLLLSLDPLGDPNGALLFLDHFALASKQPDLILALHDSGLPIGLAPGALATSATAGAASGDAXXXVEXXSPAAGGGVPAAPGVTVADLPGLNFSRAIALL----DKNGKDRLAALSAMRDALLSFPAAVEPLLSKAGIDVRSTRNAHNWGGVLRHRLFASA 1539
            +K+ +  P D+WP+PP+F+GGG+   ++  P      + A   + C ++    S  YK+LQ  F      EL Q T DPN++  F  + P+H +ALL +  V  H GQMD ASD ++RC+YV+E A+A+ F   V++G  R+D     N+ +F ALF  M+  G RGC R+A E  +LLLSLDP GDP   LL +D++AL S+Q   +++L DS  P           A    AS DA    +    A+ G        ++A LP L FS A+A      +   KD LAA      ALL FP  ++PLL K    + +  ++ +W  +L  R+FA+A
Sbjct:  212 KKVTMVSPLDEWPRPPTFVGGGIRWTRSNKP------KGAGWNSLCNYYEITWSIAYKKLQEEF------ELLQRTHDPNLISHFLQRYPYHIDALLTMSEVFQHHGQMDHASDCIKRCMYVLELAWADQFD--VSKGNCRMDIQTEHNSGFFRALFLLMKQVGRRGCMRSAFETAKLLLSLDPQGDPMNVLLAIDYYALTSRQCQFLISLFDSTTP-----------AVDRFASDDAASKKKTGWKASLGAAD-----SIAALPNLQFSLALAHFFLGNETEAKDELAA------ALLKFPTILKPLLEK----IAANPSSSSWQPILSSRVFANA 508          
BLAST of mRNA_P-wetherbeei_contig2022.1.1 vs. uniprot
Match: H3GG52_PHYRM (Uncharacterized protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GG52_PHYRM)

HSP 1 Score: 182 bits (461), Expect = 1.410e-45
Identity = 123/337 (36.50%), Postives = 179/337 (53.12%), Query Frame = 1
Query:  541 RKLLLGLPADDWPKPPSFIGGGLGMVKTAAPAYLPPWQAAAHGAGCTWFAFQASDVYKQLQASFLAQARYELAQATMDPNVLVVFASQSPHHAEALLQLGMVLAHTGQMDRASDLVRRCLYVVECAYAEGFGAAVARGAARLDACLPENATYFAALFRHMQMAGMRGCPRTAAEVCRLLLSLDPLGDPNGALLFLDHFALASKQPDLILALHDSGLPIGLAPGALATSATAGAASGDAXXXVEXXSPAAGGGVPAAPGVTVADLPGLNFSRAIALL----DKNGKDRLAALSAMRDALLSFPAAVEPLLSKAGIDVRSTRNAHNWGGVLRHRLFASA 1539
            +K+++  P D+WP+PP+F+GGG+   ++  P     W +  H    TW     S  YK+LQ  F      EL Q T DPN++  F  + P+H +ALL +  V  H GQMD ASD ++RC+YV+E A+A+ F   V++G  R+D     N  +F ALF  M+  G RGC R+A E  +LLLSLDP GDP   +L +D++AL S+Q   ++ L +S  P           A    AS D+    +  S A+          T+A LP L FS A+A      +   KD LAA      ALL FP  ++PLL K    + +  ++ +W  +L  R+FA+A
Sbjct:  465 KKVMMVSPLDEWPRPPTFVGGGIRWTRSNKPKGA-GWNSLCHYFEITW-----SMAYKKLQEEF------ELLQRTHDPNLIAHFLQRYPYHIDALLTMSEVFQHHGQMDHASDSIKRCMYVLELAWADQFD--VSKGNCRMDIQTEHNGGFFKALFLLMKQVGRRGCMRSAFETAKLLLSLDPQGDPMNVILAIDYYALTSRQCQFLIDLSNSKTP-----------AVDRFASSDSSTKKKTTSSASD---------TIAVLPNLQFSLALAHFFLGNETEAKDLLAA------ALLKFPTILKPLLEK----IAANPSSSSWQPILSSRVFANA 757          
BLAST of mRNA_P-wetherbeei_contig2022.1.1 vs. uniprot
Match: W2QZ72_PHYPN (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=W2QZ72_PHYPN)

HSP 1 Score: 178 bits (451), Expect = 2.180e-45
Identity = 119/339 (35.10%), Postives = 182/339 (53.69%), Query Frame = 1
Query:  535 AMRKLLLGLPADDWPKPPSFIGGGLGMVKTAAPAYLPPWQAAAHGAGCTWFAFQASDVYKQLQASFLAQARYELAQATMDPNVLVVFASQSPHHAEALLQLGMVLAHTGQMDRASDLVRRCLYVVECAYAEGFGAAVARGAARLDACLPENATYFAALFRHMQMAGMRGCPRTAAEVCRLLLSLDPLGDPNGALLFLDHFALASKQPDLILALHDSGLPIGLAPGALATSATAGAASGDAXXXVEXXSPAAGGGVPAAPGVTVADLPGLNFSRAIALL----DKNGKDRLAALSAMRDALLSFPAAVEPLLSKAGIDVRSTRNAHNWGGVLRHRLFASA 1539
            A++K+++  P D+WP+PP+F+GGG+   ++  P      + A   + C+++    S  YK+LQ  F      EL Q T DPN++  F  + P+H +ALL +  V  H GQMD A+D ++RC+YV+E A+A+ F   V++G  R+D     N+ +F ALF  M+  G RGC R+A E  +LLLSLDP GDP   LL +D++AL S+Q   ++ L +S  P           A    AS +A       S  A          ++A LP L FS A+A      +   K++LA       ALL FP  ++PLL K    + +  ++ +W  +L  R+FA+A
Sbjct:  177 AVKKVMMVSPLDEWPRPPTFVGGGIRWTRSNKP------KGAGWNSLCSYYEITWSIAYKKLQEEF------ELLQRTHDPNLIAHFLQRYPYHIDALLTMSEVFQHHGQMDHATDCIKRCMYVLELAWADQFD--VSKGNCRMDIQTEHNSGFFRALFLLMKQVGRRGCMRSAFETAKLLLSLDPQGDPMNVLLAIDYYALTSRQCQFLIDLFESKTP-----------AVDRFASDEAKKTSWKSSIGASD--------SIAALPNLQFSLALAHFFVGNESEAKEKLAT------ALLKFPTILKPLLEK----IAANPSSSSWQPILSSRVFANA 472          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2022.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FK35_ECTSI8.630e-8948.82Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5LA68_9PHAE4.570e-8652.07Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZGE8_9STRA2.250e-7750.60Transcriptional repressor TCF25-domain-containing ... [more]
A0A5D6XJL8_9STRA6.710e-5037.82EDR2_C domain-containing protein n=1 Tax=Pythium b... [more]
A0A6G0PRE5_9STRA2.300e-4836.36Uncharacterized protein n=4 Tax=Phytophthora TaxID... [more]
A0A067CHL9_SAPPC1.340e-4635.33Uncharacterized protein n=2 Tax=Saprolegnia TaxID=... [more]
G4YZT6_PHYSP1.710e-4637.17Uncharacterized protein n=1 Tax=Phytophthora sojae... [more]
A0A329SI05_9STRA1.080e-4536.50Calcium-dependent protein kinase 17 n=1 Tax=Phytop... [more]
H3GG52_PHYRM1.410e-4536.50Uncharacterized protein n=1 Tax=Phytophthora ramor... [more]
W2QZ72_PHYPN2.180e-4535.10Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig2022contigP-wetherbeei_contig2022:810..2922 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D7FK35
Preferred nameTCF25
PFAMsTcf25
Model size1539
Max annot lvl2759|Eukaryota
KEGG koko:K14206
KEGG TC2.A.17.4.1,2.A.17.4.2
KEGG Pathwayko04974,map04974
Hectar predicted targeting categoryother localisation
GOsGO:0000122,GO:0003674,GO:0003700,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0006355,GO:0006357,GO:0006412,GO:0006414,GO:0006417,GO:0006508,GO:0006511,GO:0006518,GO:0006807,GO:0007275,GO:0007507,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009892,GO:0009987,GO:0010467,GO:0010468,GO:0010498,GO:0010556,GO:0010558,GO:0010605,GO:0010608,GO:0010629,GO:0019219,GO:0019222,GO:0019538,GO:0019941,GO:0030163,GO:0031323,GO:0031324,GO:0031326,GO:0031327,GO:0032268,GO:0032501,GO:0032502,GO:0032991,GO:0034248,GO:0034641,GO:0034645,GO:0043043,GO:0043161,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043603,GO:0043604,GO:0043632,GO:0044237,GO:0044238,GO:0044248,GO:0044249,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044271,GO:0044424,GO:0044464,GO:0045892,GO:0045934,GO:0048513,GO:0048519,GO:0048523,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0051171,GO:0051172,GO:0051246,GO:0051252,GO:0051253,GO:0051603,GO:0060255,GO:0065007,GO:0071704,GO:0072344,GO:0072359,GO:0080090,GO:0140110,GO:1901564,GO:1901565,GO:1901566,GO:1901575,GO:1901576,GO:1902679,GO:1903506,GO:1903507,GO:1990112,GO:1990116,GO:2000112,GO:2000113,GO:2001141
Exons4
Evalue1.41e-89
EggNOG OGsKOG2422@1|root,KOG2422@2759|Eukaryota
Descriptionribosome-associated ubiquitin-dependent protein catabolic process
Cds size1539
COG categoryU
BRITEko00000,ko00001,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186193.8143218-CDS-P-wetherbeei_contig2022:809..15431683186193.8143218-CDS-P-wetherbeei_contig2022:809..1543Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2022 810..1543 +
1683186193.8285725-CDS-P-wetherbeei_contig2022:1772..20611683186193.8285725-CDS-P-wetherbeei_contig2022:1772..2061Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2022 1773..2061 +
1683186193.8385096-CDS-P-wetherbeei_contig2022:2343..25411683186193.8385096-CDS-P-wetherbeei_contig2022:2343..2541Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2022 2344..2541 +
1683186193.847826-CDS-P-wetherbeei_contig2022:2604..29221683186193.847826-CDS-P-wetherbeei_contig2022:2604..2922Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2022 2605..2922 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig2022.1.1prot_P-wetherbeei_contig2022.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig2022 810..2922 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig2022.1.1

>prot_P-wetherbeei_contig2022.1.1 ID=prot_P-wetherbeei_contig2022.1.1|Name=mRNA_P-wetherbeei_contig2022.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=513bp
MSARQRKRLTNATIEHVEEDSDSDSEPEQRPKVSTFVHLSSSDESEQESS
EAEESEGEENTDAPKKSEKAVEGPQGAGKKGAPATKDVHEDDDVLLDEAI
QSIAIAANQASSAGNGNDGGADDVPYSAAFQCDTRNLSIAKELRQRFGGA
ATAGGGGVAIPRGGDPRRRKPGGAMMAGAMRKLLLGLPADDWPKPPSFIG
GGLGMVKTAAPAYLPPWQAAAHGAGCTWFAFQASDVYKQLQASFLAQARY
ELAQATMDPNVLVVFASQSPHHAEALLQLGMVLAHTGQMDRASDLVRRCL
YVVECAYAEGFGAAVARGAARLDACLPENATYFAALFRHMQMAGMRGCPR
TAAEVCRLLLSLDPLGDPNGALLFLDHFALASKQPDLILALHDSGLPIGL
APGALATSATAGAASGDAAAAVEAASPAAGGGVPAAPGVTVADLPGLNFS
RAIALLDKNGKDRLAALSAMRDALLSFPAAVEPLLSKAGIDVRSTRNAHN
WGGVLRHRLFASA
back to top

mRNA from alignment at P-wetherbeei_contig2022:810..2922+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig2022.1.1 ID=mRNA_P-wetherbeei_contig2022.1.1|Name=mRNA_P-wetherbeei_contig2022.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2113bp|location=Sequence derived from alignment at P-wetherbeei_contig2022:810..2922+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGTGCAAGGCAGCGAAAGAGACTAACAAATGCGACAATAGAGCACGT AGAAGAAGACTCAGACTCGGACAGCGAGCCCGAACAACGCCCGAAAGTCT CAACCTTCGTCCATCTCTCATCGAGCGATGAATCCGAGCAAGAGTCCTCA GAAGCAGAGGAAAGTGAAGGCGAAGAGAACACGGATGCTCCGAAGAAGAG CGAAAAGGCTGTGGAAGGCCCCCAAGGTGCGGGGAAAAAGGGCGCTCCGG CAACCAAGGACGTCCACGAAGACGACGATGTCTTGCTTGACGAAGCCATC CAGAGTATCGCCATCGCTGCCAACCAAGCCAGCAGTGCAGGAAACGGAAA CGACGGCGGCGCGGACGACGTGCCGTATTCTGCGGCTTTCCAATGCGACA CCCGCAACCTCAGCATCGCCAAGGAGCTGCGGCAACGCTTCGGCGGAGCT GCCACCGCTGGCGGCGGCGGCGTCGCCATACCGCGCGGCGGCGATCCGCG CCGCCGCAAGCCGGGCGGCGCCATGATGGCGGGCGCAATGCGAAAGCTGC TGCTCGGCCTGCCGGCAGACGACTGGCCAAAGCCTCCCAGCTTCATCGGC GGCGGCCTTGGCATGGTCAAAACGGCGGCGCCGGCATATTTGCCGCCGTG GCAGGCCGCAGCGCACGGCGCTGGGTGCACGTGGTTCGCCTTCCAGGCAT CCGATGTCTACAAGCAGCTGCAGGCAAGTTTTCTGTGCTCGCACGCTTTC TGTTATCCAAGCGCTGGCTTGCGACGTGCTTTTGAAGTCAAGCTTTCATT ATCTCCCACTCGCCTACCGAACGCCTTCTCCCCGTTCGACGCTGCTCTCT TTGCCCCTTCATGCTGACTAGATGTTCTTCCCTGATGCCACGATGATCTT CCCTCTGTTCACTTTGCTGTTGCCCGGCCGTTCTTCTTCGCGTTTCGCGC CGCCAACGCCAAGCGCACAGGCCCGCTACGAGCTGGCGCAGGCGACGATG GACCCCAACGTGCTGGTGGTCTTTGCGTCGCAATCACCGCACCACGCCGA GGCGCTCCTTCAGCTTGGCATGGTGCTTGCCCACACGGGCCAGATGGACC GCGCCTCGGACCTGGTGCGGCGCTGTCTTTACGTGGTCGAGTGCGCCTAT GCGGAGGGCTTCGGCGCGGCCGTGGCGCGGGGGGCGGCGCGGCTGGACGC GTGCCTGCCGGAAAACGCCACGTATTTCGCGGCGCTCTTCCGGCACATGC AGGTGAGGAGGGAGAGGGTGGTGGCAGGTGCTGTTGCGCTCTGAGCTTCA CGGTTTCATTCTTTCAGCAGTTTCTGTCCTCTCTTGAAGTGTCAGGATTT CTCGCCACGTTCGTCTTATCAATCTGGTGTCCCAGGAGTCTGTTTTTTAA AAGACCTCTTTTTAAAGACCTCTTTTTAAAGACGCTTGCAGTAGCACTTT GAGAGTAACCTTCCTTCAAAGCTCCTTATTCCTCTACCCTTTTCGCCTCT TGCTATGCCTGCCTTACCTCTCCGATCTCGGCAGATGGCGGGGATGCGGG GCTGCCCGCGGACGGCCGCGGAGGTGTGCCGCCTTCTCCTCTCGCTCGAC CCGCTGGGGGACCCCAACGGGGCGCTGCTCTTCCTCGACCACTTTGCGCT CGCCAGCAAGCAGCCCGACCTCATCCTAGCGCTCCACGACAGCGGCCTGC CCATCGGCCTTGCGCCGGGCGCGCTGGCGACTGTAGCGGCGGCGACCGGC GCATCGGCAGCAGCTGTGGCCGGGGAATCTGCTGCGACGGCGGAGTCAGC AACAGCGGGAGCGGCATCAGGGGATGCGGCGGCGGCAGTGGAAGCGGCAT CGCCGGCAGCAGGAGGAGGAGTCCCAGCCGCGCCCGGTGTCACCGTCGCC GACCTGCCCGGGCTGAACTTTTCCCGGGCCATCGCCCTGCTGGACAAGAA CGGCAAAGACCGCCTCGCCGCGCTTTCGGCGATGCGCGACGCGCTGCTGA GCTTCCCGGCGGCGGTCGAGCCGCTGCTCTCCAAGGCTGGGATCGACGTG CGGTCGACGCGGAACGCGCACAACTGGGGCGGCGTGTTGCGGCACCGCCT CTTCGCCTCCGCC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig2022:810..2922+

>mRNA_P-wetherbeei_contig2022.1.1 ID=mRNA_P-wetherbeei_contig2022.1.1|Name=mRNA_P-wetherbeei_contig2022.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1539bp|location=Sequence derived from alignment at P-wetherbeei_contig2022:810..2922+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAGTGCAAGGCAGCGAAAGAGACTAACAAATGCGACAATAGAGCACGT
AGAAGAAGACTCAGACTCGGACAGCGAGCCCGAACAACGCCCGAAAGTCT
CAACCTTCGTCCATCTCTCATCGAGCGATGAATCCGAGCAAGAGTCCTCA
GAAGCAGAGGAAAGTGAAGGCGAAGAGAACACGGATGCTCCGAAGAAGAG
CGAAAAGGCTGTGGAAGGCCCCCAAGGTGCGGGGAAAAAGGGCGCTCCGG
CAACCAAGGACGTCCACGAAGACGACGATGTCTTGCTTGACGAAGCCATC
CAGAGTATCGCCATCGCTGCCAACCAAGCCAGCAGTGCAGGAAACGGAAA
CGACGGCGGCGCGGACGACGTGCCGTATTCTGCGGCTTTCCAATGCGACA
CCCGCAACCTCAGCATCGCCAAGGAGCTGCGGCAACGCTTCGGCGGAGCT
GCCACCGCTGGCGGCGGCGGCGTCGCCATACCGCGCGGCGGCGATCCGCG
CCGCCGCAAGCCGGGCGGCGCCATGATGGCGGGCGCAATGCGAAAGCTGC
TGCTCGGCCTGCCGGCAGACGACTGGCCAAAGCCTCCCAGCTTCATCGGC
GGCGGCCTTGGCATGGTCAAAACGGCGGCGCCGGCATATTTGCCGCCGTG
GCAGGCCGCAGCGCACGGCGCTGGGTGCACGTGGTTCGCCTTCCAGGCAT
CCGATGTCTACAAGCAGCTGCAGGCAAGTTTTCTCGCACAGGCCCGCTAC
GAGCTGGCGCAGGCGACGATGGACCCCAACGTGCTGGTGGTCTTTGCGTC
GCAATCACCGCACCACGCCGAGGCGCTCCTTCAGCTTGGCATGGTGCTTG
CCCACACGGGCCAGATGGACCGCGCCTCGGACCTGGTGCGGCGCTGTCTT
TACGTGGTCGAGTGCGCCTATGCGGAGGGCTTCGGCGCGGCCGTGGCGCG
GGGGGCGGCGCGGCTGGACGCGTGCCTGCCGGAAAACGCCACGTATTTCG
CGGCGCTCTTCCGGCACATGCAGATGGCGGGGATGCGGGGCTGCCCGCGG
ACGGCCGCGGAGGTGTGCCGCCTTCTCCTCTCGCTCGACCCGCTGGGGGA
CCCCAACGGGGCGCTGCTCTTCCTCGACCACTTTGCGCTCGCCAGCAAGC
AGCCCGACCTCATCCTAGCGCTCCACGACAGCGGCCTGCCCATCGGCCTT
GCGCCGGGCGCGCTGGCGACTTCAGCAACAGCGGGAGCGGCATCAGGGGA
TGCGGCGGCGGCAGTGGAAGCGGCATCGCCGGCAGCAGGAGGAGGAGTCC
CAGCCGCGCCCGGTGTCACCGTCGCCGACCTGCCCGGGCTGAACTTTTCC
CGGGCCATCGCCCTGCTGGACAAGAACGGCAAAGACCGCCTCGCCGCGCT
TTCGGCGATGCGCGACGCGCTGCTGAGCTTCCCGGCGGCGGTCGAGCCGC
TGCTCTCCAAGGCTGGGATCGACGTGCGGTCGACGCGGAACGCGCACAAC
TGGGGCGGCGTGTTGCGGCACCGCCTCTTCGCCTCCGCC
back to top