mRNA_P-wetherbeei_contig20214.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20214.2.1
Unique NamemRNA_P-wetherbeei_contig20214.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20214.2.1 vs. uniprot
Match: D7FTM7_ECTSI (Xylulose kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTM7_ECTSI)

HSP 1 Score: 197 bits (502), Expect = 1.440e-60
Identity = 95/131 (72.52%), Postives = 109/131 (83.21%), Query Frame = 1
Query:    1 ALWLKRNKPEVYKAARYICEYQDYMNFHLTGRMVGSLNNASIRWHYSTARGRPASLLRSLSLDDLSGKWPTEFLPLGAVVGGLTAAAAAHLGLPEGLPVAQGGADAFVGMVGLGAVAPGNLALLTGSSHLH 393
            ALWLK+N+PE++  A Y+CEYQD++NF LTGRMV S+NNASIRWHYST  G P SLL  L L DL GKWP E + LG+VVGG++AAAA HLGLPEG+PVAQGGADAFVGMVGLG V  G +ALLTGSSHLH
Sbjct:  141 ALWLKKNEPELFARAHYVCEYQDFINFRLTGRMVASVNNASIRWHYSTTHGWPVSLLEKLDLADLQGKWPQEVVALGSVVGGISAAAAQHLGLPEGIPVAQGGADAFVGMVGLGVVNSGEMALLTGSSHLH 271          
BLAST of mRNA_P-wetherbeei_contig20214.2.1 vs. uniprot
Match: A0A835YTS4_9STRA (Glycerol kinase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTS4_9STRA)

HSP 1 Score: 200 bits (508), Expect = 1.170e-57
Identity = 97/131 (74.05%), Postives = 109/131 (83.21%), Query Frame = 1
Query:    1 ALWLKRNKPEVYKAARYICEYQDYMNFHLTGRMVGSLNNASIRWHYSTARGRPASLLRSLSLDDLSGKWPTEFLPLGAVVGGLTAAAAAHLGLPEGLPVAQGGADAFVGMVGLGAVAPGNLALLTGSSHLH 393
            ALWLKRN+P+ Y AA+Y+CEYQD+MN  LTGRMV S+NNASIRWHY + RG P SLL +L L DL  KWP E L LGAV+GGLT  AAAHLGLPEGLPVAQGGADAFVG++GLG V PG +ALLTGSSHLH
Sbjct:  149 ALWLKRNEPDTYAAAKYVCEYQDFMNLRLTGRMVASINNASIRWHYCSKRGWPTSLLAALDLSDLMEKWPQEMLELGAVIGGLTRDAAAHLGLPEGLPVAQGGADAFVGILGLGVVNPGEMALLTGSSHLH 279          
BLAST of mRNA_P-wetherbeei_contig20214.2.1 vs. uniprot
Match: A0A6H5K691_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K691_9PHAE)

HSP 1 Score: 196 bits (499), Expect = 2.130e-56
Identity = 95/131 (72.52%), Postives = 107/131 (81.68%), Query Frame = 1
Query:    1 ALWLKRNKPEVYKAARYICEYQDYMNFHLTGRMVGSLNNASIRWHYSTARGRPASLLRSLSLDDLSGKWPTEFLPLGAVVGGLTAAAAAHLGLPEGLPVAQGGADAFVGMVGLGAVAPGNLALLTGSSHLH 393
            ALWLK+N+PE++  A Y+CEYQD++NF LTGRMV S+NNASIRWHYST  G P SLL  L L DL GKWP E + LG VVGG++A AA HLGLPEGLPVAQGGADAFVGMVGLG V  G +ALLTGSSHLH
Sbjct:  141 ALWLKKNEPELFARAHYVCEYQDFINFRLTGRMVASVNNASIRWHYSTTHGWPVSLLEKLDLADLQGKWPQEVIALGGVVGGISAEAAQHLGLPEGLPVAQGGADAFVGMVGLGVVNSGEMALLTGSSHLH 271          
BLAST of mRNA_P-wetherbeei_contig20214.2.1 vs. uniprot
Match: A0A7J7PJ27_9CHLO (Glycerol kinase n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PJ27_9CHLO)

HSP 1 Score: 191 bits (485), Expect = 2.700e-56
Identity = 91/130 (70.00%), Postives = 107/130 (82.31%), Query Frame = 1
Query:    1 ALWLKRNKPEVYKAARYICEYQDYMNFHLTGRMVGSLNNASIRWHYSTARGRPASLLRSLSLDDLSGKWPTEFLPLGAVVGGLTAAAAAHLGLPEGLPVAQGGADAFVGMVGLGAVAPGNLALLTGSSHL 390
            ALWL + +P+ Y+AA YICEYQDYMN+HLTG MV S++N S+RWHY+++RG P SLL  L L  L  KWP E LPLGA VG LTA+AAAHLGLPEGL VAQGG+DAF+GMVGLG VAPG +A+LTGSSHL
Sbjct:  141 ALWLSQEEPQTYQAASYICEYQDYMNYHLTGNMVASISNVSVRWHYNSSRGWPVSLLEKLGLSSLLDKWPKEILPLGATVGHLTASAAAHLGLPEGLLVAQGGSDAFIGMVGLGVVAPGQMAMLTGSSHL 270          
BLAST of mRNA_P-wetherbeei_contig20214.2.1 vs. uniprot
Match: A0A2P6VDM7_9CHLO (Glycerol kinase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VDM7_9CHLO)

HSP 1 Score: 193 bits (490), Expect = 3.810e-55
Identity = 96/133 (72.18%), Postives = 109/133 (81.95%), Query Frame = 1
Query:    1 ALWLKRNKPEVYKAARYICEYQDYMNFHLTGRMVGSLNNASIRWHYSTAR--GRPASLLRSLSLDDLSGKWPTEFLPLGAVVGGLTAAAAAHLGLPEGLPVAQGGADAFVGMVGLGAVAPGNLALLTGSSHLH 393
            ALWL   +PEV++ A  ICEYQDY+NF+LTGRMV S+NNASIRWHYST R  G P  LL+++ L+ L  KWP E LPLGAVVGGLT AAAAHLGLPEGLPVAQGGADA +GM+GLG + PG LALLTGSSHLH
Sbjct:  140 ALWLAEKEPEVFEEAATICEYQDYLNFNLTGRMVASVNNASIRWHYSTQRPGGWPTGLLKAIGLEGLQAKWPQEVLPLGAVVGGLTPAAAAHLGLPEGLPVAQGGADADIGMIGLGVIKPGQLALLTGSSHLH 272          
BLAST of mRNA_P-wetherbeei_contig20214.2.1 vs. uniprot
Match: A0A2P6TT72_CHLSO (Glycerol kinase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TT72_CHLSO)

HSP 1 Score: 191 bits (485), Expect = 1.680e-54
Identity = 97/133 (72.93%), Postives = 108/133 (81.20%), Query Frame = 1
Query:    1 ALWLKRNKPEVYKAARYICEYQDYMNFHLTGRMVGSLNNASIRWHYSTAR--GRPASLLRSLSLDDLSGKWPTEFLPLGAVVGGLTAAAAAHLGLPEGLPVAQGGADAFVGMVGLGAVAPGNLALLTGSSHLH 393
            ALWLK N+ EV++ A  ICEYQD++NFHLTGR   S+NN SIRWHYST R  G P S+L+ L L+ L  KWP E LPLGAVVGGLTAAAAAHLGLPEGLPVAQGGADA +GMVGLG + PG LALLTGSSHLH
Sbjct:  141 ALWLKENEGEVFERAAVICEYQDFINFHLTGRWCASVNNVSIRWHYSTQRPGGWPISMLQKLGLEALQQKWPQEVLPLGAVVGGLTAAAAAHLGLPEGLPVAQGGADADIGMVGLGVIRPGQLALLTGSSHLH 273          
BLAST of mRNA_P-wetherbeei_contig20214.2.1 vs. uniprot
Match: A0A7S0N3A4_9CHLO (Hypothetical protein (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0N3A4_9CHLO)

HSP 1 Score: 176 bits (446), Expect = 2.330e-53
Identity = 87/135 (64.44%), Postives = 103/135 (76.30%), Query Frame = 1
Query:    1 ALWLKRNKPEVYKAARYICEYQDYMNFHLTGRMVGSLNNASIRWHYSTARGRP-----ASLLRSLSLDDLSGKWPTEFLPLGAVVGGLTAAAAAHLGLPEGLPVAQGGADAFVGMVGLGAVAPGNLALLTGSSHL 390
            ALW+K+N+P+V++ A YICEYQDY+NF LTGRM  S+NN S+RWHYS +   P      SLL+SL L +L  KWP E LPLG  VGGLT  AAAHLGLP G+PVAQGGADAF+GM+GLG    G LAL+TGSSHL
Sbjct:   46 ALWIKQNRPDVFEKATYICEYQDYLNFKLTGRMCASINNVSVRWHYSASGSTPEERWPTSLLKSLDLSELLKKWPKEVLPLGERVGGLTPEAAAHLGLPPGVPVAQGGADAFIGMLGLGVTEAGQLALITGSSHL 180          
BLAST of mRNA_P-wetherbeei_contig20214.2.1 vs. uniprot
Match: A0A383W972_TETOB (Glycerol kinase n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383W972_TETOB)

HSP 1 Score: 187 bits (476), Expect = 4.260e-53
Identity = 90/130 (69.23%), Postives = 107/130 (82.31%), Query Frame = 1
Query:    1 ALWLKRNKPEVYKAARYICEYQDYMNFHLTGRMVGSLNNASIRWHYSTARGRPASLLRSLSLDDLSGKWPTEFLPLGAVVGGLTAAAAAHLGLPEGLPVAQGGADAFVGMVGLGAVAPGNLALLTGSSHL 390
            ALWL + +PE ++AA YICEYQDY+NFHLTGRMV S++N S+RWHY+++RG P SLL  L L  L  KWP + LPLGA VG LTA+AAAHLGLPEGL VAQGG+DAF+GMVGLG V PG +A+LTGSSHL
Sbjct:  141 ALWLFQEEPETFQAATYICEYQDYLNFHLTGRMVASISNVSVRWHYNSSRGWPVSLLEKLGLSSLVDKWPRDILPLGAPVGHLTASAAAHLGLPEGLLVAQGGSDAFIGMVGLGVVEPGQMAMLTGSSHL 270          
BLAST of mRNA_P-wetherbeei_contig20214.2.1 vs. uniprot
Match: A0A836QKK5_9BACT (Carbohydrate kinase n=1 Tax=Candidatus Latescibacteria bacterium TaxID=2053570 RepID=A0A836QKK5_9BACT)

HSP 1 Score: 178 bits (452), Expect = 1.040e-52
Identity = 87/131 (66.41%), Postives = 103/131 (78.63%), Query Frame = 1
Query:    1 ALWLKRNKPEVYKAARYICEYQDYMNFHLTGRMVGSLNNASIRWHYSTARGR-PASLLRSLSLDDLSGKWPTEFLPLGAVVGGLTAAAAAHLGLPEGLPVAQGGADAFVGMVGLGAVAPGNLALLTGSSHL 390
            ALW+K+N+PE+++ A  +CEYQDY+N+HLTGR V S+ N S RWHY+ ARG  P +LL  L L DL+ KWP E L LG VVGGLTA AA HL LP+GLPV QGGADAFVGMVGLG V PG+LA +TGSSHL
Sbjct:   72 ALWIKQNEPEIFERAAVVCEYQDYVNYHLTGRWVASITNVSARWHYNRARGGVPETLLERLGLSDLAAKWPAEALDLGQVVGGLTARAAEHLALPKGLPVVQGGADAFVGMVGLGVVRPGSLAFITGSSHL 202          
BLAST of mRNA_P-wetherbeei_contig20214.2.1 vs. uniprot
Match: A0A7C7KPM4_9PROT (Carbohydrate kinase n=1 Tax=Kiloniellaceae bacterium TaxID=2480820 RepID=A0A7C7KPM4_9PROT)

HSP 1 Score: 181 bits (459), Expect = 2.870e-52
Identity = 90/132 (68.18%), Postives = 105/132 (79.55%), Query Frame = 1
Query:    1 ALWLKRNKPEVYKAARYICEYQDYMNFHLTGRMVGSLNNASIRWHYSTARGR-PASLLRSLSLDDLSGKWPTEFLPLGAVVGGLTAAAAAHLGLPEGLPVAQGGADAFVGMVGLGAVAPGNLALLTGSSHLH 393
            ALWL+R++PEV+  A  ICEYQDY+N+HLTGR V S+NNA+IRWHY  A G     LL  L +D L  KWP+E LPLGAV+GGLTA AA HLGLP+ LPVAQGGADAF+GM+GLG V PG+LA LTGSSHLH
Sbjct:  143 ALWLQRHEPEVFDRAVTICEYQDYLNYHLTGRRVASINNAAIRWHYLAADGGFQPGLLAKLGIDALMDKWPSEVLPLGAVIGGLTARAAEHLGLPKDLPVAQGGADAFIGMIGLGVVRPGSLAFLTGSSHLH 274          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20214.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FTM7_ECTSI1.440e-6072.52Xylulose kinase n=1 Tax=Ectocarpus siliculosus Tax... [more]
A0A835YTS4_9STRA1.170e-5774.05Glycerol kinase n=1 Tax=Tribonema minus TaxID=3033... [more]
A0A6H5K691_9PHAE2.130e-5672.52Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7J7PJ27_9CHLO2.700e-5670.00Glycerol kinase n=1 Tax=Scenedesmus sp. NREL 46B-D... [more]
A0A2P6VDM7_9CHLO3.810e-5572.18Glycerol kinase n=1 Tax=Micractinium conductrix Ta... [more]
A0A2P6TT72_CHLSO1.680e-5472.93Glycerol kinase n=1 Tax=Chlorella sorokiniana TaxI... [more]
A0A7S0N3A4_9CHLO2.330e-5364.44Hypothetical protein (Fragment) n=1 Tax=Pyramimona... [more]
A0A383W972_TETOB4.260e-5369.23Glycerol kinase n=1 Tax=Tetradesmus obliquus TaxID... [more]
A0A836QKK5_9BACT1.040e-5266.41Carbohydrate kinase n=1 Tax=Candidatus Latescibact... [more]
A0A7C7KPM4_9PROT2.870e-5268.18Carbohydrate kinase n=1 Tax=Kiloniellaceae bacteri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20214contigP-wetherbeei_contig20214:624..1236 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FTM7
Preferred nameXK-RPE
PFAMsFGGY_C,FGGY_N,Ribul_P_3_epim
Model size393
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
Exons2
Evalue2.36e-61
EggNOG OGsCOG0554@1|root,KOG2517@2759|Eukaryota
Descriptionglycerol kinase activity
Cds size393
COG categoryC
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186193.713274-CDS-P-wetherbeei_contig20214:623..6891683186193.713274-CDS-P-wetherbeei_contig20214:623..689Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20214 624..689 +
1683186193.7268546-CDS-P-wetherbeei_contig20214:909..12361683186193.7268546-CDS-P-wetherbeei_contig20214:909..1236Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20214 910..1236 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20214.2.1prot_P-wetherbeei_contig20214.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20214 624..1236 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20214.2.1

>prot_P-wetherbeei_contig20214.2.1 ID=prot_P-wetherbeei_contig20214.2.1|Name=mRNA_P-wetherbeei_contig20214.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=131bp
ALWLKRNKPEVYKAARYICEYQDYMNFHLTGRMVGSLNNASIRWHYSTAR
GRPASLLRSLSLDDLSGKWPTEFLPLGAVVGGLTAAAAAHLGLPEGLPVA
QGGADAFVGMVGLGAVAPGNLALLTGSSHLH
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mRNA from alignment at P-wetherbeei_contig20214:624..1236+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20214.2.1 ID=mRNA_P-wetherbeei_contig20214.2.1|Name=mRNA_P-wetherbeei_contig20214.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=613bp|location=Sequence derived from alignment at P-wetherbeei_contig20214:624..1236+ (Phaeothamnion wetherbeei SAG_119_79)
GCCCTTTGGCTAAAGCGCAACAAGCCGGAGGTTTACAAGGCGGCGCGGTA CATCTGCGAGTACCAGGTAAGCGGTATTGACCCGGGGCGTCGTGACCCTC CTCCCTTTTTCTGCGTAGTCCAATCCATTGAGATTCTTGCTGTCACGACG GATAGGCAGGGAAGTCGCTTGCTGCCGGCTTGCCGTTTCCTTCTTCGTTT CCAAATCCTTCTCACACCCTTCTCGCCTGCCACTTATCGTCTTGCTGTGC CCGCCCCAACTCCGAACCGTGGCTCCCCACCAAAAGGACTACATGAATTT CCACCTGACGGGCAGGATGGTGGGCAGCCTCAACAACGCCTCTATCCGCT GGCACTATTCCACCGCCCGCGGCCGCCCCGCCTCCCTTCTGCGCTCTTTA AGCCTCGATGACCTGTCCGGCAAGTGGCCCACAGAATTCCTGCCGCTCGG CGCGGTCGTCGGCGGCCTGACGGCGGCCGCCGCGGCGCATCTGGGTCTGC CGGAGGGCCTTCCCGTGGCGCAGGGCGGCGCCGACGCCTTTGTGGGCATG GTTGGCCTGGGCGCGGTGGCGCCAGGGAACCTGGCGCTGCTCACAGGCTC GTCGCACCTGCAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20214:624..1236+

>mRNA_P-wetherbeei_contig20214.2.1 ID=mRNA_P-wetherbeei_contig20214.2.1|Name=mRNA_P-wetherbeei_contig20214.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=393bp|location=Sequence derived from alignment at P-wetherbeei_contig20214:624..1236+ (Phaeothamnion wetherbeei SAG_119_79)
GCCCTTTGGCTAAAGCGCAACAAGCCGGAGGTTTACAAGGCGGCGCGGTA
CATCTGCGAGTACCAGGACTACATGAATTTCCACCTGACGGGCAGGATGG
TGGGCAGCCTCAACAACGCCTCTATCCGCTGGCACTATTCCACCGCCCGC
GGCCGCCCCGCCTCCCTTCTGCGCTCTTTAAGCCTCGATGACCTGTCCGG
CAAGTGGCCCACAGAATTCCTGCCGCTCGGCGCGGTCGTCGGCGGCCTGA
CGGCGGCCGCCGCGGCGCATCTGGGTCTGCCGGAGGGCCTTCCCGTGGCG
CAGGGCGGCGCCGACGCCTTTGTGGGCATGGTTGGCCTGGGCGCGGTGGC
GCCAGGGAACCTGGCGCTGCTCACAGGCTCGTCGCACCTGCAC
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