mRNA_P-wetherbeei_contig20195.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20195.1.1
Unique NamemRNA_P-wetherbeei_contig20195.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20195.1.1 vs. uniprot
Match: A0A523P034_9PROT (Methylhydantoinase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523P034_9PROT)

HSP 1 Score: 386 bits (992), Expect = 5.050e-129
Identity = 187/246 (76.02%), Postives = 224/246 (91.06%), Query Frame = 1
Query:   31 VIDQTKVDPVTFEVLRSIFEYASERMSTVLKRASFSPILADMVDFSNAIYDYECKLLSQAANCPIHLAAMKFSAEAIIEQYPLSTMQPGDVYVLNDPYKGGTHINDMTFLSPIFFDGDIIAFGVSRGHWMDLGGGAAGGQAFAGTHIAGEGLRLPPLKLYEAGKVREDLLAIIMNNTRTPFYVKGDTQAHVGALKAATQEMERAAEKYGMATLKAAMKQLQEYTERIVRKSIADMPDGEYEAEEYA 768
            +++Q++VDP+TFEVLRSIFEYASERMSTVL+RASFSPILADMVDFSNAIYD + +LLSQAANCP+HLAAMKFSAEAII+Q+ L  +  GDV ++NDPY+GGTHINDMTFL+PIFFD +++AF VSRGHW+DLGGGAAGGQAF GTHIAGEGLRLPP+K+YE G+VR+D+LAI++ NTRTP +V+GD QAHVG L+A  QEM+RAAEKYG+ATL AAMKQLQ+YTERIVR SIA++PDG Y AE+YA
Sbjct:    1 MVEQSQVDPITFEVLRSIFEYASERMSTVLQRASFSPILADMVDFSNAIYDADAQLLSQAANCPVHLAAMKFSAEAIIKQFGLDNIHEGDVIMVNDPYQGGTHINDMTFLTPIFFDSELLAFAVSRGHWLDLGGGAAGGQAFRGTHIAGEGLRLPPIKIYERGEVRDDILAILLCNTRTPHFVRGDLQAHVGCLRAGEQEMQRAAEKYGVATLTAAMKQLQKYTERIVRNSIAEIPDGTYTAEDYA 246          
BLAST of mRNA_P-wetherbeei_contig20195.1.1 vs. uniprot
Match: A0A1Z9UJJ1_9GAMM (Methylhydantoinase n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1Z9UJJ1_9GAMM)

HSP 1 Score: 382 bits (982), Expect = 2.320e-127
Identity = 191/256 (74.61%), Postives = 220/256 (85.94%), Query Frame = 1
Query:    1 MDKKVKVDTAVIDQTKVDPVTFEVLRSIFEYASERMSTVLKRASFSPILADMVDFSNAIYDYECKLLSQAANCPIHLAAMKFSAEAIIEQYPLSTMQPGDVYVLNDPYKGGTHINDMTFLSPIFFDGDIIAFGVSRGHWMDLGGGAAGGQAFAGTHIAGEGLRLPPLKLYEAGKVREDLLAIIMNNTRTPFYVKGDTQAHVGALKAATQEMERAAEKYGMATLKAAMKQLQEYTERIVRKSIADMPDGEYEAEEYA 768
            MD  VK +  V D +KVDPVTFEVLRSIFEYA++RMS+VL+RASFSPILADM+DFSNAIYD + +LLSQAANCPIHLAAMKFSAEAII++YP++ M+P DVYV+NDPYKGGTH ND+TF+ PIFF+G II FGVSRGHWMDLGGGAAGGQA  GTHIAGEGLRLPPLK++  G+V +D+L II+NNTRTP +VKGD QAHVG LKAA  E+  AAE+YG+  L  AMKQLQEYTE IVRK I D+PDGEY AEEYA
Sbjct:    1 MDTLVKSNNLVEDGSKVDPVTFEVLRSIFEYAADRMSSVLQRASFSPILADMIDFSNAIYDADAQLLSQAANCPIHLAAMKFSAEAIIDKYPVNQMKPEDVYVVNDPYKGGTHXNDITFMMPIFFNGXIIGFGVSRGHWMDLGGGAAGGQAMDGTHIAGEGLRLPPLKIFSQGEVNQDILDIILNNTRTPHFVKGDLQAHVGCLKAADTELRAAAERYGIDVLTVAMKQLQEYTENIVRKGILDIPDGEYFAEEYA 256          
BLAST of mRNA_P-wetherbeei_contig20195.1.1 vs. uniprot
Match: A0A2W5KM59_STANO (Methylhydantoinase n=1 Tax=Starkeya novella TaxID=921 RepID=A0A2W5KM59_STANO)

HSP 1 Score: 353 bits (907), Expect = 4.360e-116
Identity = 174/254 (68.50%), Postives = 217/254 (85.43%), Query Frame = 1
Query:    7 KKVKVDTAVIDQTKVDPVTFEVLRSIFEYASERMSTVLKRASFSPILADMVDFSNAIYDYECKLLSQAANCPIHLAAMKFSAEAIIEQYPLSTMQPGDVYVLNDPYKGGTHINDMTFLSPIFFDGDIIAFGVSRGHWMDLGGGAAGGQAFAGTHIAGEGLRLPPLKLYEAGKVREDLLAIIMNNTRTPFYVKGDTQAHVGALKAATQEMERAAEKYGMATLKAAMKQLQEYTERIVRKSIADMPDGEYEAEEYA 768
            K+  VD +V++   VDPVTFEVLR+ F+YA  RM+T+++R SFSPILAD++DFSNAIYD E +LL+QAANCP+HLAAMK+SA+A I +YP+ T++PGDV  LNDPY+GGTHIND+TF+ PIF+D  II F VSRGHWMDLGGGAAGGQ+F GTHIAGEGLRLPPLKLY+  K+ EDLLAIIMNNTRTPF++KGD QAH+GALK+A  E++RAA +YG   ++AAM+QL  YTERIVRKSI ++PDG+Y AE++A
Sbjct:    7 KQPGVDPSVLEDG-VDPVTFEVLRNTFDYACNRMATIMQRTSFSPILADVLDFSNAIYDAEVRLLAQAANCPVHLAAMKYSADAAIAKYPIDTLKPGDVIALNDPYQGGTHINDITFVMPIFYDEKIIGFAVSRGHWMDLGGGAAGGQSF-GTHIAGEGLRLPPLKLYQNYKINEDLLAIIMNNTRTPFFIKGDLQAHLGALKSAESELQRAAARYGAPVVQAAMRQLIGYTERIVRKSIEEIPDGDYTAEDFA 258          
BLAST of mRNA_P-wetherbeei_contig20195.1.1 vs. uniprot
Match: UPI001C955962 (hydantoinase B/oxoprolinase family protein n=2 Tax=Geminicoccus TaxID=489140 RepID=UPI001C955962)

HSP 1 Score: 342 bits (877), Expect = 1.100e-111
Identity = 167/252 (66.27%), Postives = 210/252 (83.33%), Query Frame = 1
Query:   13 VKVDTAVIDQTKVDPVTFEVLRSIFEYASERMSTVLKRASFSPILADMVDFSNAIYDYECKLLSQAANCPIHLAAMKFSAEAIIEQYPLSTMQPGDVYVLNDPYKGGTHINDMTFLSPIFFDGDIIAFGVSRGHWMDLGGGAAGGQAFAGTHIAGEGLRLPPLKLYEAGKVREDLLAIIMNNTRTPFYVKGDTQAHVGALKAATQEMERAAEKYGMATLKAAMKQLQEYTERIVRKSIADMPDGEYEAEEYA 768
            VKVD+      K+DP+TFEVLR+ F+YA +RMST+++R SFSPILAD++D+SNAIYD + +LLSQAANCP+HLAAM+FSA+A   ++P+ T++PGDV  LNDPY+GGTHIND+TF  PIF +G+I+ F VSRGHWMDLGGGAAGGQ+F GTH+A EGLRLPP+KLYE  ++  D LAIIMNNTRTP +VKGD QAH+GALK+A  E++RAA +YG  T+KAAM  L  YTERIVRKSI D+PDG+Y AE++A
Sbjct:    6 VKVDS------KIDPITFEVLRNTFQYACDRMSTIMQRTSFSPILADILDYSNAIYDPQLRLLSQAANCPVHLAAMQFSADASTARFPIDTLKPGDVIALNDPYQGGTHINDITFTMPIFHEGEILGFAVSRGHWMDLGGGAAGGQSF-GTHVAAEGLRLPPIKLYENYEINRDFLAIIMNNTRTPHFVKGDLQAHLGALKSAETELQRAATRYGTETIKAAMSDLIGYTERIVRKSIEDIPDGDYTAEDFA 250          
BLAST of mRNA_P-wetherbeei_contig20195.1.1 vs. uniprot
Match: A0A0W1G0Z0_9SPHN (Methylhydantoinase n=2 Tax=Sphingomonadaceae TaxID=41297 RepID=A0A0W1G0Z0_9SPHN)

HSP 1 Score: 338 bits (867), Expect = 2.380e-111
Identity = 159/241 (65.98%), Postives = 205/241 (85.06%), Query Frame = 1
Query:   46 KVDPVTFEVLRSIFEYASERMSTVLKRASFSPILADMVDFSNAIYDYECKLLSQAANCPIHLAAMKFSAEAIIEQYPLSTMQPGDVYVLNDPYKGGTHINDMTFLSPIFFDGDIIAFGVSRGHWMDLGGGAAGGQAFAGTHIAGEGLRLPPLKLYEAGKVREDLLAIIMNNTRTPFYVKGDTQAHVGALKAATQEMERAAEKYGMATLKAAMKQLQEYTERIVRKSIADMPDGEYEAEEYA 768
            ++DP+TFEVLRS+F+Y  +RM+T L+R+SFSPIL+DM+DFSNAIYD   +LL+QAANCP+HLAAMKFSAEA + +YP+ T+ PGDV V+NDPY+GGTHIND++F+ PI+F  D+I F VSRGHWMDLGGGAAGGQAF GTHIA EGLRLPPLK+Y   K+ +DLL II+NNTRTP +V+GD QAH G L++A QE++RA  +YG+ T   AM+Q+Q+YTER+VR +I+++PDGEYE E+YA
Sbjct:    9 QIDPITFEVLRSVFDYTCDRMATTLQRSSFSPILSDMLDFSNAIYDRNLQLLAQAANCPVHLAAMKFSAEAAVRKYPVETLSPGDVLVVNDPYQGGTHINDISFIMPIYFGKDLIGFAVSRGHWMDLGGGAAGGQAF-GTHIAAEGLRLPPLKIYSEYKINQDLLDIILNNTRTPHFVQGDLQAHFGCLRSAEQELQRACARYGVETTVKAMEQVQKYTERMVRAAISNIPDGEYEGEDYA 248          
BLAST of mRNA_P-wetherbeei_contig20195.1.1 vs. uniprot
Match: A0A386UTQ5_9RHOB (N-methylhydantoinase n=5 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A386UTQ5_9RHOB)

HSP 1 Score: 340 bits (873), Expect = 4.050e-111
Identity = 163/240 (67.92%), Postives = 207/240 (86.25%), Query Frame = 1
Query:   49 VDPVTFEVLRSIFEYASERMSTVLKRASFSPILADMVDFSNAIYDYECKLLSQAANCPIHLAAMKFSAEAIIEQYPLSTMQPGDVYVLNDPYKGGTHINDMTFLSPIFFDGDIIAFGVSRGHWMDLGGGAAGGQAFAGTHIAGEGLRLPPLKLYEAGKVREDLLAIIMNNTRTPFYVKGDTQAHVGALKAATQEMERAAEKYGMATLKAAMKQLQEYTERIVRKSIADMPDGEYEAEEYA 768
            +DP+TFEV+RSIFE+AS+RM+TV++R+SFSPILADM+DFSNAIYD +  LLSQAANCP+HLAAMKFSAE  ++    + ++ GDV VLNDPY+GGTHIND+TF  PI+F  ++I + VSRGHWMDLGGG AGGQAF+ THIA EGLRLPPLK++  GK+ EDL+AII+NNTRTP ++KGDTQAH+GAL AA QEM+RA E+YG+ T++AAMK++Q YTE++VR+SI  +PDG YEAE+YA
Sbjct:    9 IDPITFEVMRSIFEFASDRMATVMQRSSFSPILADMLDFSNAIYDADLHLLSQAANCPVHLAAMKFSAEEAVKGIGAANIREGDVLVLNDPYRGGTHINDITFTKPIYFKKELIGYAVSRGHWMDLGGGGAGGQAFS-THIAAEGLRLPPLKIFSGGKLNEDLMAIILNNTRTPHFIKGDTQAHLGALLAAEQEMQRACERYGVDTVRAAMKKIQAYTEKMVRESIRSIPDGVYEAEDYA 247          
BLAST of mRNA_P-wetherbeei_contig20195.1.1 vs. uniprot
Match: A0A132BRL8_9RHOB (Acetophenone carboxylase delta subunit n=4 Tax=Rhodobacterales TaxID=204455 RepID=A0A132BRL8_9RHOB)

HSP 1 Score: 340 bits (873), Expect = 4.530e-111
Identity = 158/240 (65.83%), Postives = 207/240 (86.25%), Query Frame = 1
Query:   49 VDPVTFEVLRSIFEYASERMSTVLKRASFSPILADMVDFSNAIYDYECKLLSQAANCPIHLAAMKFSAEAIIEQYPLSTMQPGDVYVLNDPYKGGTHINDMTFLSPIFFDGDIIAFGVSRGHWMDLGGGAAGGQAFAGTHIAGEGLRLPPLKLYEAGKVREDLLAIIMNNTRTPFYVKGDTQAHVGALKAATQEMERAAEKYGMATLKAAMKQLQEYTERIVRKSIADMPDGEYEAEEYA 768
            VD VTFEVLR+ FEYA  RMST+++R SFSPILAD++DFSNA+YD E +LL+QAANCP+HLAAM++SA+A   +YP+ TM+PGD+Y LNDPY+GGTHIND+TF+ P+F++ +++ F VSRGHWMDLGGGAAGG +F+ TH+A EGLR+PP+KLYE  ++  D LAIIMNNTRTPF+++GD QAH+GAL+AA QE++RAA +YG+ T+KAAMK+L  YTERI+RKSI ++PDG Y AE++A
Sbjct:   12 VDAVTFEVLRNTFEYACNRMSTIMQRTSFSPILADILDFSNAVYDPELRLLAQAANCPVHLAAMQYSADAAARKYPIETMKPGDIYALNDPYQGGTHINDITFIMPVFYEEEVLGFAVSRGHWMDLGGGAAGGMSFS-THVAAEGLRIPPIKLYENYEINPDFLAIIMNNTRTPFFIEGDLQAHLGALRAAEQELQRAARRYGLQTVKAAMKELIGYTERIIRKSIEEIPDGVYYAEDFA 250          
BLAST of mRNA_P-wetherbeei_contig20195.1.1 vs. uniprot
Match: UPI001BA47F49 (hydantoinase B/oxoprolinase family protein n=1 Tax=Bradyrhizobium manausense TaxID=989370 RepID=UPI001BA47F49)

HSP 1 Score: 340 bits (871), Expect = 1.040e-110
Identity = 165/249 (66.27%), Postives = 211/249 (84.74%), Query Frame = 1
Query:   25 TAVIDQT-KVDPVTFEVLRSIFEYASERMSTVLKRASFSPILADMVDFSNAIYDYECKLLSQAANCPIHLAAMKFSAEAIIEQYPLSTMQPGDVYVLNDPYKGGTHINDMTFLSPIFFDGDIIAFGVSRGHWMDLGGGAAGGQAFAGTHIAGEGLRLPPLKLYEAGKVREDLLAIIMNNTRTPFYVKGDTQAHVGALKAATQEMERAAEKYGMATLKAAMKQLQEYTERIVRKSIADMPDGEYEAEEYA 768
            TA +D + ++DPVTFEVLR+ FEYA  RM+T+++R SFSPILAD++DFSNAIYD + +LL+QAANCP+HLAAM++SA+A I ++P+ T++PGDV  LNDPY+GGTHIND+TF  PIFF G++I F VSRGHWMDLGGGAAGG +F+ THIA EGLRLPP+KLY+  ++ ED LAIIMNNTRTP Y++GD QAH+GALK+A  E++RAAE+YG+ T+KAAM +L  YTERIVRKSI  +PDG Y AE++A
Sbjct:    7 TAKLDVSDRIDPVTFEVLRNTFEYACSRMTTIMQRTSFSPILADILDFSNAIYDSKVRLLAQAANCPVHLAAMQYSADAAIARFPIETLKPGDVIALNDPYQGGTHINDITFTMPIFFKGELIGFAVSRGHWMDLGGGAAGGMSFS-THIAAEGLRLPPIKLYQNYEINEDYLAIIMNNTRTPHYIRGDLQAHLGALKSAEAELQRAAERYGVETVKAAMNELIGYTERIVRKSIEAIPDGVYSAEDFA 254          
BLAST of mRNA_P-wetherbeei_contig20195.1.1 vs. uniprot
Match: A0A1V0GN80_9RHOB (Methylhydantoinase n=3 Tax=Paracoccus yeei TaxID=147645 RepID=A0A1V0GN80_9RHOB)

HSP 1 Score: 339 bits (869), Expect = 1.620e-110
Identity = 164/240 (68.33%), Postives = 205/240 (85.42%), Query Frame = 1
Query:   49 VDPVTFEVLRSIFEYASERMSTVLKRASFSPILADMVDFSNAIYDYECKLLSQAANCPIHLAAMKFSAEAIIEQYPLSTMQPGDVYVLNDPYKGGTHINDMTFLSPIFFDGDIIAFGVSRGHWMDLGGGAAGGQAFAGTHIAGEGLRLPPLKLYEAGKVREDLLAIIMNNTRTPFYVKGDTQAHVGALKAATQEMERAAEKYGMATLKAAMKQLQEYTERIVRKSIADMPDGEYEAEEYA 768
            +DP+TFEV+RSIFE+AS+RM+TVL+R+SFSPILADM+DFSNAIYD + +LLSQAANCP+HLAAMKFSAE  +       +  GDV VLNDPY+GGTHIND+TF  PIF+ G +I +GVSRGHWMDLGGG AGGQAF+ THIA EGLRLPPLK+Y  GK+ EDLLAII+NN+RTP ++KGD QAH+GAL AA QEM+RA ++YG+ T++AAMK++Q YTE++VR+SI  +P+G YEAE+YA
Sbjct:    9 IDPITFEVMRSIFEFASDRMATVLQRSSFSPILADMLDFSNAIYDADLQLLSQAANCPVHLAAMKFSAEEAVRGVGPQNVHEGDVLVLNDPYRGGTHINDITFTKPIFYKGALIGYGVSRGHWMDLGGGGAGGQAFS-THIAAEGLRLPPLKIYSGGKLNEDLLAIILNNSRTPHFIKGDVQAHLGALLAAEQEMQRACDRYGVDTVRAAMKKIQAYTEKMVRESIRTIPNGIYEAEDYA 247          
BLAST of mRNA_P-wetherbeei_contig20195.1.1 vs. uniprot
Match: A0A7H9C004_PARPN (Hydantoinase B/oxoprolinase family protein n=7 Tax=Proteobacteria TaxID=1224 RepID=A0A7H9C004_PARPN)

HSP 1 Score: 338 bits (867), Expect = 3.230e-110
Identity = 163/240 (67.92%), Postives = 205/240 (85.42%), Query Frame = 1
Query:   49 VDPVTFEVLRSIFEYASERMSTVLKRASFSPILADMVDFSNAIYDYECKLLSQAANCPIHLAAMKFSAEAIIEQYPLSTMQPGDVYVLNDPYKGGTHINDMTFLSPIFFDGDIIAFGVSRGHWMDLGGGAAGGQAFAGTHIAGEGLRLPPLKLYEAGKVREDLLAIIMNNTRTPFYVKGDTQAHVGALKAATQEMERAAEKYGMATLKAAMKQLQEYTERIVRKSIADMPDGEYEAEEYA 768
            +DP+TFEV+RSIFE+AS+RM+TVL+R+SFSPILADM+DFSNAIYD + +LLSQAANCP+HLAAMKFSAE  ++      +  GDV VLNDPY+GGTHIND+TF  PIF+ G +I +GVSRGHWMDLGGG AGGQAF+ THIA EGLRLPPLK+Y  GK+ EDLLAII+NN+RTP ++KGD QAH+GAL AA QE++RA ++YG+ T++AAMK++Q YTE++VR SI  +P+G YEAE+YA
Sbjct:    9 IDPITFEVMRSIFEFASDRMATVLQRSSFSPILADMLDFSNAIYDADLQLLSQAANCPVHLAAMKFSAEEAVKGVGPQNVHEGDVLVLNDPYRGGTHINDITFTKPIFYKGQLIGYGVSRGHWMDLGGGGAGGQAFS-THIAAEGLRLPPLKIYSGGKLNEDLLAIILNNSRTPHFIKGDVQAHLGALLAAEQELQRACDRYGVDTVRAAMKKIQAYTEKMVRGSIRTIPNGVYEAEDYA 247          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20195.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A523P034_9PROT5.050e-12976.02Methylhydantoinase n=1 Tax=Proteobacteria bacteriu... [more]
A0A1Z9UJJ1_9GAMM2.320e-12774.61Methylhydantoinase n=2 Tax=Gammaproteobacteria Tax... [more]
A0A2W5KM59_STANO4.360e-11668.50Methylhydantoinase n=1 Tax=Starkeya novella TaxID=... [more]
UPI001C9559621.100e-11166.27hydantoinase B/oxoprolinase family protein n=2 Tax... [more]
A0A0W1G0Z0_9SPHN2.380e-11165.98Methylhydantoinase n=2 Tax=Sphingomonadaceae TaxID... [more]
A0A386UTQ5_9RHOB4.050e-11167.92N-methylhydantoinase n=5 Tax=Alphaproteobacteria T... [more]
A0A132BRL8_9RHOB4.530e-11165.83Acetophenone carboxylase delta subunit n=4 Tax=Rho... [more]
UPI001BA47F491.040e-11066.27hydantoinase B/oxoprolinase family protein n=1 Tax... [more]
A0A1V0GN80_9RHOB1.620e-11068.33Methylhydantoinase n=3 Tax=Paracoccus yeei TaxID=1... [more]
A0A7H9C004_PARPN3.230e-11067.92Hydantoinase B/oxoprolinase family protein n=7 Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20195contigP-wetherbeei_contig20195:472..1239 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1089551.KE386572_gene450
PFAMsHydantoinase_B
Model size768
Max annot lvl28211|Alphaproteobacteria
KEGG rclassRC00632
KEGG koko:K01474
KEGG ReactionR03187
KEGG Pathwayko00330,ko01100,map00330,map01100
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.81e-112
EggNOG OGsCOG0146@1|root,COG0146@2|Bacteria,1QU46@1224|Proteobacteria,2TVYU@28211|Alphaproteobacteria,4BRTN@82117|unclassified Alphaproteobacteria
EC3.5.2.14
DescriptionN-methylhydantoinase B acetone carboxylase, alpha subunit
Cds size768
COG categoryEQ
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186193.1768026-CDS-P-wetherbeei_contig20195:471..12391683186193.1768026-CDS-P-wetherbeei_contig20195:471..1239Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20195 472..1239 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20195.1.1prot_P-wetherbeei_contig20195.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20195 472..1239 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20195.1.1

>prot_P-wetherbeei_contig20195.1.1 ID=prot_P-wetherbeei_contig20195.1.1|Name=mRNA_P-wetherbeei_contig20195.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=256bp
MDKKVKVDTAVIDQTKVDPVTFEVLRSIFEYASERMSTVLKRASFSPILA
DMVDFSNAIYDYECKLLSQAANCPIHLAAMKFSAEAIIEQYPLSTMQPGD
VYVLNDPYKGGTHINDMTFLSPIFFDGDIIAFGVSRGHWMDLGGGAAGGQ
AFAGTHIAGEGLRLPPLKLYEAGKVREDLLAIIMNNTRTPFYVKGDTQAH
VGALKAATQEMERAAEKYGMATLKAAMKQLQEYTERIVRKSIADMPDGEY
EAEEYA
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mRNA from alignment at P-wetherbeei_contig20195:472..1239+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20195.1.1 ID=mRNA_P-wetherbeei_contig20195.1.1|Name=mRNA_P-wetherbeei_contig20195.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=768bp|location=Sequence derived from alignment at P-wetherbeei_contig20195:472..1239+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGATAAGAAAGTAAAAGTCGATACCGCCGTCATCGATCAGACCAAGGT CGATCCGGTGACCTTCGAAGTCCTGCGCAGCATCTTCGAATACGCCAGCG AGCGCATGTCGACAGTGCTGAAACGCGCCTCGTTCTCGCCCATCCTGGCG GATATGGTCGATTTCTCGAATGCGATATACGACTACGAGTGCAAGCTGCT GTCGCAGGCCGCCAACTGCCCGATACACCTTGCCGCCATGAAGTTCAGCG CCGAGGCGATCATCGAACAATATCCGCTGTCGACCATGCAGCCCGGTGAT GTGTATGTGCTGAACGACCCTTACAAGGGCGGCACCCACATCAATGACAT GACTTTTCTCTCACCGATATTCTTCGACGGCGACATCATCGCCTTCGGTG TCAGTCGTGGTCACTGGATGGATCTCGGTGGCGGTGCTGCGGGAGGTCAG GCCTTTGCTGGCACGCATATCGCCGGTGAAGGCCTGCGTCTGCCGCCGTT GAAACTGTATGAAGCGGGCAAGGTGCGCGAGGACCTGCTCGCGATAATCA TGAATAACACGCGCACGCCTTTCTACGTGAAAGGCGACACCCAGGCGCAT GTCGGCGCGCTCAAGGCAGCCACCCAGGAAATGGAACGCGCGGCCGAGAA GTACGGCATGGCGACCTTGAAGGCCGCCATGAAGCAACTGCAGGAGTACA CCGAGAGGATAGTGCGCAAGTCCATCGCCGACATGCCCGACGGTGAATAC GAAGCCGAGGAATACGCC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20195:472..1239+

>mRNA_P-wetherbeei_contig20195.1.1 ID=mRNA_P-wetherbeei_contig20195.1.1|Name=mRNA_P-wetherbeei_contig20195.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=768bp|location=Sequence derived from alignment at P-wetherbeei_contig20195:472..1239+ (Phaeothamnion wetherbeei SAG_119_79)
ATGGATAAGAAAGTAAAAGTCGATACCGCCGTCATCGATCAGACCAAGGT
CGATCCGGTGACCTTCGAAGTCCTGCGCAGCATCTTCGAATACGCCAGCG
AGCGCATGTCGACAGTGCTGAAACGCGCCTCGTTCTCGCCCATCCTGGCG
GATATGGTCGATTTCTCGAATGCGATATACGACTACGAGTGCAAGCTGCT
GTCGCAGGCCGCCAACTGCCCGATACACCTTGCCGCCATGAAGTTCAGCG
CCGAGGCGATCATCGAACAATATCCGCTGTCGACCATGCAGCCCGGTGAT
GTGTATGTGCTGAACGACCCTTACAAGGGCGGCACCCACATCAATGACAT
GACTTTTCTCTCACCGATATTCTTCGACGGCGACATCATCGCCTTCGGTG
TCAGTCGTGGTCACTGGATGGATCTCGGTGGCGGTGCTGCGGGAGGTCAG
GCCTTTGCTGGCACGCATATCGCCGGTGAAGGCCTGCGTCTGCCGCCGTT
GAAACTGTATGAAGCGGGCAAGGTGCGCGAGGACCTGCTCGCGATAATCA
TGAATAACACGCGCACGCCTTTCTACGTGAAAGGCGACACCCAGGCGCAT
GTCGGCGCGCTCAAGGCAGCCACCCAGGAAATGGAACGCGCGGCCGAGAA
GTACGGCATGGCGACCTTGAAGGCCGCCATGAAGCAACTGCAGGAGTACA
CCGAGAGGATAGTGCGCAAGTCCATCGCCGACATGCCCGACGGTGAATAC
GAAGCCGAGGAATACGCC
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