mRNA_P-wetherbeei_contig20188.3.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20188.3.1 vs. uniprot
Match: UPI001BAB60B0 (DNA-3-methyladenine glycosylase I n=11 Tax=Bradyrhizobium TaxID=374 RepID=UPI001BAB60B0) HSP 1 Score: 435 bits (1119), Expect = 9.980e-154 Identity = 217/235 (92.34%), Postives = 224/235 (95.32%), Query Frame = 1
Query: 1 TIPFKTIRARAEKRKGGPKALQKLLPPRPDLKILAKLGDDRILAEMTKRVFSAGFAWSVIENKWPGFEKAFLGFKPGPLTLQPDDFWDALMKDTRIVRNGAKIMSVRSNAGFVQEIAREHGSFGKLLAKWPSADQTGLLDLLAKRGSRLGGNTGQMMLRFLGWDGFVTSKDMVACLRDAGLDIAETVTSKRDLAKVQAQFNEWAAETGLAYVQLSRICAMSIGENYSNETLARFV 705
TIPFKTIRARAEKRKGGPKALQKLLPP+P+ K LAKLGDD ILAEMTKRVFSAGFAWSVIENKWPGFEKAFLGFKPGPLTLQ D+FWDALMKDTRIVRNGAKIMSVRSNA FV+EIA+EHGSFGK LA WPS+DQ GLLDLLAKRGSRLGGNTGQMMLRFLGWDGFVTSKDMVACLRDAGLDIAETVTSKRDLAKVQAQFNEWA ETGL YVQLSRICAMS GENYSNETLARF+
Sbjct: 2 TIPFKTIRARAEKRKGGPKALQKLLPPKPEAKALAKLGDDSILAEMTKRVFSAGFAWSVIENKWPGFEKAFLGFKPGPLTLQADEFWDALMKDTRIVRNGAKIMSVRSNASFVREIAKEHGSFGKFLANWPSSDQIGLLDLLAKRGSRLGGNTGQMMLRFLGWDGFVTSKDMVACLRDAGLDIAETVTSKRDLAKVQAQFNEWAEETGLPYVQLSRICAMSAGENYSNETLARFL 236
BLAST of mRNA_P-wetherbeei_contig20188.3.1 vs. uniprot
Match: A0A1M6XU66_9BRAD (DNA-3-methyladenine glycosylase I n=2 Tax=Bradyrhizobium TaxID=374 RepID=A0A1M6XU66_9BRAD) HSP 1 Score: 407 bits (1045), Expect = 1.820e-142 Identity = 200/229 (87.34%), Postives = 216/229 (94.32%), Query Frame = 1
Query: 10 FKTIRARAEKRKGGPKALQKLLPPRPDLKILAKLGDDRILAEMTKRVFSAGFAWSVIENKWPGFEKAFLGFKPGPLTLQPDDFWDALMKDTRIVRNGAKIMSVRSNAGFVQEIAREHGSFGKLLAKWPSADQTGLLDLLAKRGSRLGGNTGQMMLRFLGWDGFVTSKDMVACLRDAGLDIAETVTSKRDLAKVQAQFNEWAAETGLAYVQLSRICAMSIGENYSNETLA 696
FKTIRARAEKRKGGPKAL +LLPP+PD K LAKLGDDRILAEMT+R FSAGFAWSVIE KWPGFE AFLGFKPGPLTLQPDDFWDALMKDTRIVRNGAKIMSVR+NAGFV++IAREHGSFGK LAKWPS+D+TGLL+LL+KRGSRLGGNTGQMMLRFLGWDGFVTS+D+V CLRDAGLDIAETVTSKRDLAKVQAQFN WA ETGL +VQ+SRICAMSIGENY+ + LA
Sbjct: 4 FKTIRARAEKRKGGPKALARLLPPKPDPKALAKLGDDRILAEMTRRAFSAGFAWSVIEAKWPGFETAFLGFKPGPLTLQPDDFWDALMKDTRIVRNGAKIMSVRANAGFVRDIAREHGSFGKFLAKWPSSDETGLLELLSKRGSRLGGNTGQMMLRFLGWDGFVTSRDVVLCLRDAGLDIAETVTSKRDLAKVQAQFNAWAEETGLPFVQISRICAMSIGENYTADKLA 232
BLAST of mRNA_P-wetherbeei_contig20188.3.1 vs. uniprot
Match: A0A1B1UPT4_9BRAD (3-methyladenine DNA glycosylase n=12 Tax=Bradyrhizobium TaxID=374 RepID=A0A1B1UPT4_9BRAD) HSP 1 Score: 404 bits (1037), Expect = 2.910e-141 Identity = 199/228 (87.28%), Postives = 213/228 (93.42%), Query Frame = 1
Query: 10 FKTIRARAEKRKGGPKALQKLLPPRPDLKILAKLGDDRILAEMTKRVFSAGFAWSVIENKWPGFEKAFLGFKPGPLTLQPDDFWDALMKDTRIVRNGAKIMSVRSNAGFVQEIAREHGSFGKLLAKWPSADQTGLLDLLAKRGSRLGGNTGQMMLRFLGWDGFVTSKDMVACLRDAGLDIAETVTSKRDLAKVQAQFNEWAAETGLAYVQLSRICAMSIGENYSNETL 693
FKTIR RAEKRKGGPKAL KLLP +PD K LAKLGDD+ILAEMTKRVF AGFAWSVIE+KWPGFEKAFLGFKPGPLTLQPDDFWD LMKD RIVRNGAKIMSVR+NAGFV+++A+EHGSFGK LA WPS+DQ GLL+LLAKRGSRLGGNTGQMMLRFLGWDGFVTS+D+V CLRDAGLDIAETVTSKRDLAKVQAQFNEWA ETGL+YVQLSRICA+SIGENYS E L
Sbjct: 4 FKTIRVRAEKRKGGPKALAKLLPAKPDPKALAKLGDDQILAEMTKRVFCAGFAWSVIESKWPGFEKAFLGFKPGPLTLQPDDFWDGLMKDIRIVRNGAKIMSVRANAGFVRDVAKEHGSFGKFLADWPSSDQAGLLELLAKRGSRLGGNTGQMMLRFLGWDGFVTSRDVVLCLRDAGLDIAETVTSKRDLAKVQAQFNEWAEETGLSYVQLSRICALSIGENYSAEKL 231
BLAST of mRNA_P-wetherbeei_contig20188.3.1 vs. uniprot
Match: A0A0R3M173_9BRAD (3-methyladenine DNA glycosylase n=14 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A0R3M173_9BRAD) HSP 1 Score: 393 bits (1010), Expect = 3.920e-137 Identity = 193/228 (84.65%), Postives = 211/228 (92.54%), Query Frame = 1
Query: 10 FKTIRARAEKRKGGPKALQKLLPPRPDLKILAKLGDDRILAEMTKRVFSAGFAWSVIENKWPGFEKAFLGFKPGPLTLQPDDFWDALMKDTRIVRNGAKIMSVRSNAGFVQEIAREHGSFGKLLAKWPSADQTGLLDLLAKRGSRLGGNTGQMMLRFLGWDGFVTSKDMVACLRDAGLDIAETVTSKRDLAKVQAQFNEWAAETGLAYVQLSRICAMSIGENYSNETL 693
FKTIRARAEKRKGGPKAL KLLP +PD K LA+LGDDRILAEM +RVF AGFAWSVIE KWPGFEKAFLGFKPGPL+L+PD+FWD LMKDTRIVRNGAKIMSVR+NA FV++IAREHGSFGK LA WPS+D+ GLL+LLAKRGSRLGGNTGQMMLRFLGWDGFVTS+D+V CLRDAGLDIAETVTSKRDLAKVQAQFN WA ETGL+YVQ+SRICA+SIGENY+ E L
Sbjct: 4 FKTIRARAEKRKGGPKALAKLLPAKPDPKALARLGDDRILAEMARRVFCAGFAWSVIETKWPGFEKAFLGFKPGPLSLKPDEFWDDLMKDTRIVRNGAKIMSVRANASFVRDIAREHGSFGKFLANWPSSDEAGLLELLAKRGSRLGGNTGQMMLRFLGWDGFVTSRDVVLCLRDAGLDIAETVTSKRDLAKVQAQFNAWAEETGLSYVQISRICALSIGENYTAEKL 231
BLAST of mRNA_P-wetherbeei_contig20188.3.1 vs. uniprot
Match: A0A1M6S1J3_9BRAD (DNA-3-methyladenine glycosylase I n=1 Tax=Bradyrhizobium lablabi TaxID=722472 RepID=A0A1M6S1J3_9BRAD) HSP 1 Score: 390 bits (1002), Expect = 6.720e-136 Identity = 190/235 (80.85%), Postives = 213/235 (90.64%), Query Frame = 1
Query: 1 TIPFKTIRARAEKRKGGPKALQKLLPPRPDLKILAKLGDDRILAEMTKRVFSAGFAWSVIENKWPGFEKAFLGFKPGPLTLQPDDFWDALMKDTRIVRNGAKIMSVRSNAGFVQEIAREHGSFGKLLAKWPSADQTGLLDLLAKRGSRLGGNTGQMMLRFLGWDGFVTSKDMVACLRDAGLDIAETVTSKRDLAKVQAQFNEWAAETGLAYVQLSRICAMSIGENYSNETLARFV 705
TIPFKTIR+RAEKRKGG KALQ LLPP+P+ K LA+LGDDR LAEMT+RVFSAGFAWSVIE KW GFE+AFL F+PG L+L+PD+FWDAL+KD RIVRNGAKIMSVR+NA FV+E+A+EHGSFGK LAKWPS+DQ GLL+LLAKRGSRLGGNTGQM+LRFLGWDGFVTSKD+VACLRD+GLD+AE +TSKRDLAKVQAQFN WA ETGL Y LSRIC MSIGENY +TLARFV
Sbjct: 2 TIPFKTIRSRAEKRKGGAKALQALLPPKPEAKALARLGDDRALAEMTRRVFSAGFAWSVIEAKWAGFEQAFLKFEPGRLSLEPDEFWDALIKDARIVRNGAKIMSVRANASFVREVAKEHGSFGKWLAKWPSSDQIGLLELLAKRGSRLGGNTGQMLLRFLGWDGFVTSKDVVACLRDSGLDVAEAITSKRDLAKVQAQFNAWAEETGLPYTHLSRICGMSIGENYGTDTLARFV 236
BLAST of mRNA_P-wetherbeei_contig20188.3.1 vs. uniprot
Match: UPI002011985E (DNA-3-methyladenine glycosylase I n=2 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI002011985E) HSP 1 Score: 373 bits (957), Expect = 5.740e-129 Identity = 184/229 (80.35%), Postives = 206/229 (89.96%), Query Frame = 1
Query: 10 FKTIRARAEKRKGGPKALQKLLPPRPDLKILAKLGDDRILAEMTKRVFSAGFAWSVIENKWPGFEKAFLGFKPGPLTLQPDDFWDALMKDTRIVRNGAKIMSVRSNAGFVQEIAREHGSFGKLLAKWPSADQTGLLDLLAKRGSRLGGNTGQMMLRFLGWDGFVTSKDMVACLRDAGLDIAETVTSKRDLAKVQAQFNEWAAETGLAYVQLSRICAMSIGENYSNETLA 696
FKTIRARAEKRKGGPKAL KLLPP PD+K LAKL +DR LA MTKRVFSAGFAWSVIE KW GFE+AFLGF PG L+LQPDD+WD LMKDTRIVRNGAKIMSVRSNA FV++IAREHGSFG++LA WP++++ GLL+LL KRGSRLGGNTGQM+LRFLGWDGFVTSKD+V CLRDAGLDIAE+VTSKRDL +VQ QFN WA ETGL Y+QLSRICA+SIGENY+ + LA
Sbjct: 10 FKTIRARAEKRKGGPKALAKLLPPAPDVKALAKLRNDRALAMMTKRVFSAGFAWSVIEAKWEGFEEAFLGFDPGRLSLQPDDYWDGLMKDTRIVRNGAKIMSVRSNAVFVRDIAREHGSFGRMLAAWPASNEIGLLELLTKRGSRLGGNTGQMLLRFLGWDGFVTSKDVVTCLRDAGLDIAESVTSKRDLTRVQDQFNAWAKETGLPYIQLSRICALSIGENYAADKLA 238
BLAST of mRNA_P-wetherbeei_contig20188.3.1 vs. uniprot
Match: A0A537PUR0_9PROT (DNA-3-methyladenine glycosylase I n=2 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537PUR0_9PROT) HSP 1 Score: 365 bits (936), Expect = 6.820e-126 Identity = 181/225 (80.44%), Postives = 194/225 (86.22%), Query Frame = 1
Query: 4 IPFKTIRARAEKRKGGPKALQKLLPPRPDLKILAKLGDDRILAEMTKRVFSAGFAWSVIENKWPGFEKAFLGFKPGPLTLQPDDFWDALMKDTRIVRNGAKIMSVRSNAGFVQEIAREHGSFGKLLAKWPSADQTGLLDLLAKRGSRLGGNTGQMMLRFLGWDGFVTSKDMVACLRDAGLDIAETVTSKRDLAKVQAQFNEWAAETGLAYVQLSRICAMSIGENY 678
+PFKTIRARAEKRKGGPK L+KLLP +PD K LA+L DDRILAEMTKRVFSAGFAWSVIE KW GFE+AFLGFKP LT QPDD+WD L+KDTRIVRNGAKI SVR NA FVQ IA EHGSFGK L KWPS+D+ GLLDLLAKRGSRLGGNTGQM LRF+GWDGFV S+D+V CLRDAGLDIA SKRDLAKVQAQFN WA ETGL Y LSRICAMSIGEN+
Sbjct: 11 VPFKTIRARAEKRKGGPKELEKLLPRKPDAKALARLSDDRILAEMTKRVFSAGFAWSVIEAKWAGFEEAFLGFKPTKLTFQPDDYWDDLLKDTRIVRNGAKISSVRENAAFVQGIANEHGSFGKFLTKWPSSDEVGLLDLLAKRGSRLGGNTGQMFLRFVGWDGFVMSQDVVECLRDAGLDIAAEAKSKRDLAKVQAQFNVWAKETGLPYAHLSRICAMSIGENH 235
BLAST of mRNA_P-wetherbeei_contig20188.3.1 vs. uniprot
Match: A0A7W6XIV7_9BRAD (3-methyladenine DNA glycosylase Tag n=2 Tax=Bradyrhizobium sp. CIR48 TaxID=2663840 RepID=A0A7W6XIV7_9BRAD) HSP 1 Score: 365 bits (936), Expect = 7.320e-126 Identity = 178/225 (79.11%), Postives = 199/225 (88.44%), Query Frame = 1
Query: 7 PFKTIRARAEKRKGGPKALQKLLPPRPDLKILAKLGDDRILAEMTKRVFSAGFAWSVIENKWPGFEKAFLGFKPGPLTLQPDDFWDALMKDTRIVRNGAKIMSVRSNAGFVQEIAREHGSFGKLLAKWPSADQTGLLDLLAKRGSRLGGNTGQMMLRFLGWDGFVTSKDMVACLRDAGLDIAETVTSKRDLAKVQAQFNEWAAETGLAYVQLSRICAMSIGENYS 681
PFKTIRARAEKRKGGPKAL+KL+P +PDLK LAKLGDDRILAEMTKRVF AGFAWSVIE KW GFE AFL F+P L+ QP+D+W+ L++D RIVRNGAKIMSVR NA FVQEIA++HGSFGK LAKWPS+D+ GLLDL+ KRGSRLGGNTGQM+LRF+GWDGFVTS D+VACLRDAGLDIAE V SKRDLAKVQAQFN WA ETGL Y LSRICA+S+GE+ S
Sbjct: 14 PFKTIRARAEKRKGGPKALEKLMPAKPDLKRLAKLGDDRILAEMTKRVFCAGFAWSVIETKWDGFEDAFLRFQPAKLSFQPEDYWEGLLRDARIVRNGAKIMSVRDNAAFVQEIAKDHGSFGKFLAKWPSSDEIGLLDLMTKRGSRLGGNTGQMLLRFVGWDGFVTSADVVACLRDAGLDIAEEVKSKRDLAKVQAQFNAWAEETGLPYTYLSRICALSVGESRS 238
BLAST of mRNA_P-wetherbeei_contig20188.3.1 vs. uniprot
Match: A0A2T2QJZ5_9BRAD (3-methyladenine DNA glycosylase n=2 Tax=Bradyrhizobium sp. MOS002 TaxID=2133947 RepID=A0A2T2QJZ5_9BRAD) HSP 1 Score: 365 bits (938), Expect = 8.450e-126 Identity = 179/225 (79.56%), Postives = 200/225 (88.89%), Query Frame = 1
Query: 10 FKTIRARAEKRKGGPKALQKLLPPRPDLKILAKLGDDRILAEMTKRVFSAGFAWSVIENKWPGFEKAFLGFKPGPLTLQPDDFWDALMKDTRIVRNGAKIMSVRSNAGFVQEIAREHGSFGKLLAKWPSADQTGLLDLLAKRGSRLGGNTGQMMLRFLGWDGFVTSKDMVACLRDAGLDIAETVTSKRDLAKVQAQFNEWAAETGLAYVQLSRICAMSIGENYSN 684
FKTIRARAEKRKGGPKAL+KL+P +PDLK LAK GDDRILAEMTKRVF AGFAWSVIE KW GFEKAFL F+P LT QP+D+W+ L++D RIVRNGAKIMSVR NA FVQ IAREHGSFG+ LAKWPS+DQ GLLDLL+KRGSRLGGNTGQM+LRF+GWDGFVTS+D+VACLRDAGLDIAE V SK DLAKVQAQFN WA ETGL+Y LSR+CA+S+GEN S+
Sbjct: 38 FKTIRARAEKRKGGPKALEKLMPEKPDLKGLAKRGDDRILAEMTKRVFCAGFAWSVIETKWDGFEKAFLQFQPAKLTFQPEDYWEGLLRDARIVRNGAKIMSVRDNAAFVQAIAREHGSFGRFLAKWPSSDQIGLLDLLSKRGSRLGGNTGQMLLRFVGWDGFVTSRDVVACLRDAGLDIAEEVKSKGDLAKVQAQFNAWAEETGLSYTYLSRVCALSVGENRSD 262
BLAST of mRNA_P-wetherbeei_contig20188.3.1 vs. uniprot
Match: UPI001BAE34B2 (DNA-3-methyladenine glycosylase I n=1 Tax=Bradyrhizobium lablabi TaxID=722472 RepID=UPI001BAE34B2) HSP 1 Score: 364 bits (934), Expect = 1.110e-125 Identity = 180/222 (81.08%), Postives = 194/222 (87.39%), Query Frame = 1
Query: 10 FKTIRARAEKRKGGPKALQKLLPPRPDLKILAKLGDDRILAEMTKRVFSAGFAWSVIENKWPGFEKAFLGFKPGPLTLQPDDFWDALMKDTRIVRNGAKIMSVRSNAGFVQEIAREHGSFGKLLAKWPSADQTGLLDLLAKRGSRLGGNTGQMMLRFLGWDGFVTSKDMVACLRDAGLDIAETVTSKRDLAKVQAQFNEWAAETGLAYVQLSRICAMSIGEN 675
FK IRARAEKRKGGPKAL KLLP +PD+K LAKLGDDRILAEMT+RVF AGFAWSVIENKWP FEKAFLGFKP L QPD+FWD LM D RIVRNGAKIMSVR NA FVQE A+EHGSFGK LA WP++D+ GLLDLLAKRGSRLGGNTGQM+LRF+GWDGFVTSKD+VACLR+AGLDIAE SK DLAKVQAQFN WA ETGL Y LSRICA+S+GEN
Sbjct: 7 FKIIRARAEKRKGGPKALVKLLPGKPDIKALAKLGDDRILAEMTQRVFCAGFAWSVIENKWPDFEKAFLGFKPAKLLFQPDEFWDGLMDDKRIVRNGAKIMSVRENAQFVQETAKEHGSFGKFLASWPASDEVGLLDLLAKRGSRLGGNTGQMLLRFVGWDGFVTSKDVVACLREAGLDIAEEPKSKSDLAKVQAQFNAWAEETGLPYTHLSRICALSVGEN 228 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20188.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20188.3.1 >prot_P-wetherbeei_contig20188.3.1 ID=prot_P-wetherbeei_contig20188.3.1|Name=mRNA_P-wetherbeei_contig20188.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=235bp TIPFKTIRARAEKRKGGPKALQKLLPPRPDLKILAKLGDDRILAEMTKRVback to top mRNA from alignment at P-wetherbeei_contig20188:533..1237+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20188.3.1 ID=mRNA_P-wetherbeei_contig20188.3.1|Name=mRNA_P-wetherbeei_contig20188.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=705bp|location=Sequence derived from alignment at P-wetherbeei_contig20188:533..1237+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20188:533..1237+ >mRNA_P-wetherbeei_contig20188.3.1 ID=mRNA_P-wetherbeei_contig20188.3.1|Name=mRNA_P-wetherbeei_contig20188.3.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=705bp|location=Sequence derived from alignment at P-wetherbeei_contig20188:533..1237+ (Phaeothamnion wetherbeei SAG_119_79)back to top |