mRNA_P-wetherbeei_contig20128.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20128.2.1 vs. uniprot
Match: A0A6L8EKT9_9GAMM (Type II toxin-antitoxin system VapC family toxin n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A6L8EKT9_9GAMM) HSP 1 Score: 104 bits (260), Expect = 1.110e-24 Identity = 55/116 (47.41%), Postives = 76/116 (65.52%), Query Frame = 3
Query: 255 GKRRRLLRFWDSSAVLPLIILESRSLETLALLRANSGMLVWWGTQTECQSAIWRRNREGHETLAESQVLLNSLHSLLGGATEVTPSRAVRTQAGSLLAKHALRAADALQLAAAVHW 602
G RRL++FWD+SA++PL + E + LL +S ++VWWGT TEC SA+ R+ R G T E + + LH+L +E+ PS A+R+ A LLA H LR+ADALQLAAA+ W
Sbjct: 32 GALRRLVKFWDTSAIVPLYVHEPNTSVVRELLATDSSIIVWWGTHTECISALMRQVRTGGITSPEERACRHVLHTLAQSWSEIQPSDALRSMAERLLAVHPLRSADALQLAAALQW 147
BLAST of mRNA_P-wetherbeei_contig20128.2.1 vs. uniprot
Match: A0A651ECD1_9BACT (PIN domain-containing protein n=1 Tax=Gemmatimonadales bacterium TaxID=2448054 RepID=A0A651ECD1_9BACT) HSP 1 Score: 101 bits (252), Expect = 1.890e-23 Identity = 60/136 (44.12%), Postives = 80/136 (58.82%), Query Frame = 3
Query: 198 LSGSPSHSKNRLPRGRPAP-GKRRRLLRFWDSSAVLPLIILESRSLETLALLRANSGMLVWWGTQTECQSAIWRRNREGHETLAESQVLLNSLHSLLGGATEVTPSRAVRTQAGSLLAKHALRAADALQLAAAVHW 602
L G S ++ + R P G RRRL+RFWD+S V+PL++ + S LL ++ + WWGT EC SA R REG T+ E +L L L G E+ PS +R +AG LL H+L+AADALQLAAA+ W
Sbjct: 7 LPGHSSTGRSGRAKSRRGPRGTRRRLVRFWDTSGVVPLLLQQEASDVVRPLLESDPMIAAWWGTPVECASAAARLRREGLLTVDEEVQVLALLEDLEGAWFEIRPSEPLRREAGRLLRTHSLKAADALQLAAAITW 142
BLAST of mRNA_P-wetherbeei_contig20128.2.1 vs. uniprot
Match: A0A3N5XGX8_9BACT (PIN domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A3N5XGX8_9BACT) HSP 1 Score: 99.4 bits (246), Expect = 4.780e-23 Identity = 53/108 (49.07%), Postives = 70/108 (64.81%), Query Frame = 3
Query: 273 LRFWDSSAVLPLIILESRSLETLALLRANSGMLVWWGTQTECQSAIWRRNREGHETLAESQVLLNSLHSLLGGATEVTPSRAVRTQAGSLLAKHALRAADALQLAAAV 596
++FWDSSA++PL++ E+ + L +L + +LVWWGT EC SA+ RR REG ++ + L SL EV PS AVR+QA L+ H LRAADALQLAAAV
Sbjct: 1 MKFWDSSAIVPLLVKEASTESLLKMLEGDQQLLVWWGTPVECTSALARREREGSMPADQTTAAIERLVSLATAWDEVAPSVAVRSQARRLVRLHPLRAADALQLAAAV 108
BLAST of mRNA_P-wetherbeei_contig20128.2.1 vs. uniprot
Match: A0A7W1IAK3_9BACT (PIN domain-containing protein n=1 Tax=Gemmatimonadaceae bacterium TaxID=2026741 RepID=A0A7W1IAK3_9BACT) HSP 1 Score: 97.4 bits (241), Expect = 2.450e-22 Identity = 53/110 (48.18%), Postives = 68/110 (61.82%), Query Frame = 3
Query: 273 LRFWDSSAVLPLIILESRSLETLALLRANSGMLVWWGTQTECQSAIWRRNREGHETLAESQVLLNSLHSLLGGATEVTPSRAVRTQAGSLLAKHALRAADALQLAAAVHW 602
+RFWDSSA++PL++ +S S L R + G++VWWGT EC SAI R +R G L+ L ++ G TEV P+ VR A LL H LRAADALQLAAA+ W
Sbjct: 1 MRFWDSSAIVPLLLEQSTSRGLTVLARDSEGLVVWWGTIVECTSAITRTSRAGFIPATAETRALSLLTTIAGTWTEVQPTEVVRNTARRLLRVHPLRAADALQLAAALAW 110
BLAST of mRNA_P-wetherbeei_contig20128.2.1 vs. uniprot
Match: A0A7C2IN19_9BACT (PIN domain-containing protein n=1 Tax=candidate division NC10 bacterium TaxID=2072417 RepID=A0A7C2IN19_9BACT) HSP 1 Score: 97.4 bits (241), Expect = 2.590e-22 Identity = 53/118 (44.92%), Postives = 73/118 (61.86%), Query Frame = 3
Query: 279 FWDSSAVLPLIILESRSLETLALLRANSGMLVWWGTQTECQSAIWRRNREGHETLAESQVLLNSLHSLLGGATEVTPSRAVRTQAGSLLAKHALRAADALQLAAAVHWRTHTQQAIPF 632
FWDSSAV+PL++ ++RS LLR+++ +WW + ECQSA++RR+REG L L +L+ V P+ +R +AG LLA H LRAADALQLAAA+ W + Q F
Sbjct: 2 FWDSSAVVPLLLPDARSAGIATLLRSDAEPALWWASPVECQSALYRRHREGGLPTTALTQALERLKALVADVDIVAPTPPLRERAGRLLAGHPLRAADALQLAAALVWCDESPQGDAF 119
BLAST of mRNA_P-wetherbeei_contig20128.2.1 vs. uniprot
Match: A0A3N5QWI8_9DELT (PIN domain-containing protein n=1 Tax=Desulfobacteraceae bacterium TaxID=2049433 RepID=A0A3N5QWI8_9DELT) HSP 1 Score: 97.1 bits (240), Expect = 3.650e-22 Identity = 57/123 (46.34%), Postives = 76/123 (61.79%), Query Frame = 3
Query: 273 LRFWDSSAVLPLIILESRSLETLALLRANSGMLVWWGTQTECQSAIWRRNREGHETLAESQVLLNSLHSLLGGAT---EVTPSRAVRTQAGSLLAKHALRAADALQLAAAVHWRTHTQQAIPF 632
++FWDSSAV+PL + E S++ +L+ + M+VWW T+ EC SA+ RR REG + + L+N+ L AT EV P VR +A LLA H LRAADALQLAAA+ W T Q + F
Sbjct: 1 MKFWDSSAVIPLCLNEPASVQAGEILKIDEDMVVWWSTRIECLSALERRRREG---ALQVKTLMNARTILFALATAWSEVLPGERVRQRAERLLAVHPLRAADALQLAAALIWAEETPQDLEF 120
BLAST of mRNA_P-wetherbeei_contig20128.2.1 vs. uniprot
Match: A0A538A4L0_9ACTN (Type II toxin-antitoxin system VapC family toxin n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538A4L0_9ACTN) HSP 1 Score: 96.7 bits (239), Expect = 6.370e-22 Identity = 53/111 (47.75%), Postives = 71/111 (63.96%), Query Frame = 3
Query: 273 LRFWDSSAVLPLIILESRSLETLALLRANSGMLVWWGTQTECQSAIWRRNREGHETLAESQVLLNSLHSLLGGATEVTPSRAVRTQAGSLLAKHALRAADALQLAAAVHWR 605
+RFWD+SA++PL+ E S + LLR ++ M+VWWG++ EC SA+ RR RE A ++ + L +L +EV PS A+R QA LA H LRA DALQLAAA WR
Sbjct: 1 MRFWDASALVPLLFSERWSEQARKLLREDAAMVVWWGSRVECVSALRRRERESALDAAGARQAVALLDALASAWSEVLPSDALRAQAERALAVHPLRAPDALQLAAAFTWR 111
BLAST of mRNA_P-wetherbeei_contig20128.2.1 vs. uniprot
Match: A0A2V7GJX2_9BACT (Uncharacterized protein n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V7GJX2_9BACT) HSP 1 Score: 96.3 bits (238), Expect = 7.250e-22 Identity = 53/121 (43.80%), Postives = 79/121 (65.29%), Query Frame = 3
Query: 279 FWDSSAVLPLIILESRSLETLALLRANSGMLVWWGTQTECQSAIWRRNREG---HETLAESQVLLNSLHSLLGGATEVTPSRAVRTQAGSLLAKHALRAADALQLAAAVHWRTHTQQAIPF 632
FWD+SA++P ++ E RS+ T++LLRA+ +++WW + ECQSA++R++RE H+ L E+ V L L+ A + P+ +R +AG L+A H LRAADALQLAAA+ W Q F
Sbjct: 2 FWDASALVPTLVPEVRSVATVSLLRADRQVILWWVSPVECQSALYRQHREDKIPHDLLNEALV---RLRGLVEDADFIAPTIGLRERAGRLVASHPLRAADALQLAAALVWCDEAPQGAAF 119
BLAST of mRNA_P-wetherbeei_contig20128.2.1 vs. uniprot
Match: A0A522TFM3_9BACT (PIN domain-containing protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A522TFM3_9BACT) HSP 1 Score: 95.9 bits (237), Expect = 1.080e-21 Identity = 49/108 (45.37%), Postives = 71/108 (65.74%), Query Frame = 3
Query: 273 LRFWDSSAVLPLIILESRSLETLALLRANSGMLVWWGTQTECQSAIWRRNREGHETLAESQVLLNSLHSLLGGATEVTPSRAVRTQAGSLLAKHALRAADALQLAAAV 596
+RFWD+SA+ PLI+ + + AL+ + GM+VWWG++ EC S++ RR REG AES+ L ++ EV P+ +R ++ LL +H+LRAADALQLAAAV
Sbjct: 1 MRFWDASALSPLIVTDVFTARAEALMHQDEGMMVWWGSRVECASSLARREREGRLAAAESEASWRRLERMVVTWNEVAPNDDLRAESVRLLRRHSLRAADALQLAAAV 108
BLAST of mRNA_P-wetherbeei_contig20128.2.1 vs. uniprot
Match: A0A525WMZ7_9BACT (Type II toxin-antitoxin system VapC family toxin n=1 Tax=Nitrospira sp. CG24E TaxID=1985129 RepID=A0A525WMZ7_9BACT) HSP 1 Score: 95.5 bits (236), Expect = 1.560e-21 Identity = 50/110 (45.45%), Postives = 68/110 (61.82%), Query Frame = 3
Query: 273 LRFWDSSAVLPLIILESRSLETLALLRANSGMLVWWGTQTECQSAIWRRNREGHETLAESQVLLNSLHSLLGGATEVTPSRAVRTQAGSLLAKHALRAADALQLAAAVHW 602
++FWD+SAVLPL + E +L L + ++ WWGT EC SA+ R RE T A+ + L++L+ TE+ PS VR QAG +L H LRAADA+QLAAA+ W
Sbjct: 1 MKFWDASAVLPLCLQEPHTLNLKRLSARDGAVVAWWGTAVECYSALARLRREEALTSADEMQARSVLNALMAAWTEIEPSIVVREQAGRVLLLHPLRAADAMQLAAAIVW 110 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20128.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20128.2.1 >prot_P-wetherbeei_contig20128.2.1 ID=prot_P-wetherbeei_contig20128.2.1|Name=mRNA_P-wetherbeei_contig20128.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=92bp MKQASIAQAKAQLSALIAHVKTGEEVLLTDRGRPVARIVPLQEMDDGVYAback to top mRNA from alignment at P-wetherbeei_contig20128:613..1244+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20128.2.1 ID=mRNA_P-wetherbeei_contig20128.2.1|Name=mRNA_P-wetherbeei_contig20128.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=632bp|location=Sequence derived from alignment at P-wetherbeei_contig20128:613..1244+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20128:613..1244+ >mRNA_P-wetherbeei_contig20128.2.1 ID=mRNA_P-wetherbeei_contig20128.2.1|Name=mRNA_P-wetherbeei_contig20128.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=276bp|location=Sequence derived from alignment at P-wetherbeei_contig20128:613..1244+ (Phaeothamnion wetherbeei SAG_119_79)back to top |