mRNA_P-wetherbeei_contig20107.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20107.1.1
Unique NamemRNA_P-wetherbeei_contig20107.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20107.1.1 vs. uniprot
Match: A0A4D9D6J9_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6J9_9STRA)

HSP 1 Score: 147 bits (372), Expect = 4.900e-38
Identity = 85/165 (51.52%), Postives = 102/165 (61.82%), Query Frame = 1
Query:    7 RVAQLSECDKEMDEPGPIFDCVVWNDGGGDGDAPATWYAAVDTSETGDLSEAEAMTDYHVARQSKPFSER-DRLNYAVNVYDGGAVLSIVVDAGAHGTHVAGIVAAYHPRTSAGAGTXXXXXXXXXXXXXXXXXXVAPGAQIVSLKIGDSRLGSMETGASLTRAL 498
            R +QL E  K  D+ GP++D VVW DG       + W AAVD  E GDL   E MTD+HV R  + F+E+ D LN+AVN+Y+ G + S VVDAG+HGTHVAGI AAYHP   +  G                   +APGAQIVSLKIGDSRLGSMETG +  RAL
Sbjct:  193 RASQLEEIAKGYDDAGPLYDVVVWFDG-------SAWQAAVDVREDGDLRSWEPMTDFHVKRDWRTFNEKLDNLNFAVNIYEEGNICSFVVDAGSHGTHVAGITAAYHPECPSRNG-------------------LAPGAQIVSLKIGDSRLGSMETGVAFVRAL 331          
BLAST of mRNA_P-wetherbeei_contig20107.1.1 vs. uniprot
Match: W7U693_9STRA (Subtilisin n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U693_9STRA)

HSP 1 Score: 146 bits (368), Expect = 5.780e-38
Identity = 84/165 (50.91%), Postives = 102/165 (61.82%), Query Frame = 1
Query:    7 RVAQLSECDKEMDEPGPIFDCVVWNDGGGDGDAPATWYAAVDTSETGDLSEAEAMTDYHVARQSKPFSER-DRLNYAVNVYDGGAVLSIVVDAGAHGTHVAGIVAAYHPRTSAGAGTXXXXXXXXXXXXXXXXXXVAPGAQIVSLKIGDSRLGSMETGASLTRAL 498
            R +QL E  K  ++ GP++D VVW DG       + W AAVD  E GDL   E MTD+HV R  + F+E+ D LN+AVN+Y+ G + S VVDAG+HGTHVAGI AAYHP   +  G                   +APGAQIVSLKIGDSRLGSMETG +  RAL
Sbjct:  193 RASQLEEIAKGYEDAGPLYDVVVWFDG-------SAWQAAVDVREDGDLRSWEPMTDFHVKRDWRTFNEKLDNLNFAVNIYEEGNICSFVVDAGSHGTHVAGITAAYHPECPSRNG-------------------LAPGAQIVSLKIGDSRLGSMETGVAFVRAL 331          
BLAST of mRNA_P-wetherbeei_contig20107.1.1 vs. uniprot
Match: A0A1W0A3Y9_9STRA (Tripeptidyl-peptidase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A3Y9_9STRA)

HSP 1 Score: 144 bits (364), Expect = 5.780e-37
Identity = 82/164 (50.00%), Postives = 101/164 (61.59%), Query Frame = 1
Query:    7 RVAQLSECDKEMDEPGPIFDCVVWNDGGGDGDAPATWYAAVDTSETGDLSEAEAMTDYHVARQSKPFSERDRLNYAVNVYDGGAVLSIVVDAGAHGTHVAGIVAAYHPRTSAGAGTXXXXXXXXXXXXXXXXXXVAPGAQIVSLKIGDSRLGSMETGASLTRAL 498
            R+A L  C K   + GPI+DC+V+ DG         W AAVD SETGD + A+AMT+Y +  +   FS+  +LNYA+N+Y+ G VLSIV DAG+HGTHVAGIVAAYH       G                   VAPGAQIVS+KIGDSRLGSMET   +TR +
Sbjct:  169 RLAHLETCAKNYQDAGPIYDCIVFYDG-------THWRAAVDVSETGDFTNAQAMTNYRINHEYGKFSDASQLNYALNIYEDGKVLSIVCDAGSHGTHVAGIVAAYHDDDPKNNG-------------------VAPGAQIVSVKIGDSRLGSMETIVGVTRGV 306          
BLAST of mRNA_P-wetherbeei_contig20107.1.1 vs. uniprot
Match: D8LMK5_ECTSI (Similar to tripeptidylpeptidase II n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LMK5_ECTSI)

HSP 1 Score: 144 bits (364), Expect = 5.830e-37
Identity = 88/166 (53.01%), Postives = 100/166 (60.24%), Query Frame = 1
Query:    7 RVAQLSECDKEMDEPGPIFDCVVWNDGGGDGDAPATWY--AAVDTSETGDLSEAEAMTDYHVARQSKPFSERDRLNYAVNVYDGGAVLSIVVDAGAHGTHVAGIVAAYHPRTSAGAGTXXXXXXXXXXXXXXXXXXVAPGAQIVSLKIGDSRLGSMETGASLTRAL 498
            R A L E    +D+PGP+ DCVVW  G             AAVDT E GDL++A AMTD+   RQ   FS+   LN+ V+VYD G VLSIVVDAGAHGTHVAGIVAAY+P      G                   VAPGAQIVSLKIGDSRLGSMETG  + RA+
Sbjct:  190 RAAHLEESKASLDDPGPLHDCVVWKGGXXXXXXXXXXXXXAAVDTKEDGDLTQAVAMTDFDKLRQHGRFSDVACLNFGVHVYDDGNVLSIVVDAGAHGTHVAGIVAAYYPEDPEANG-------------------VAPGAQIVSLKIGDSRLGSMETGVGVVRAV 336          
BLAST of mRNA_P-wetherbeei_contig20107.1.1 vs. uniprot
Match: A0A3L6VQH8_9STRA (Subtilisin n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3L6VQH8_9STRA)

HSP 1 Score: 140 bits (352), Expect = 6.150e-37
Identity = 80/166 (48.19%), Postives = 101/166 (60.84%), Query Frame = 1
Query:    1 MKRVAQLSECDKEMDEPGPIFDCVVWNDGGGDGDAPATWYAAVDTSETGDLSEAEAMTDYHVARQSKPFSERDRLNYAVNVYDGGAVLSIVVDAGAHGTHVAGIVAAYHPRTSAGAGTXXXXXXXXXXXXXXXXXXVAPGAQIVSLKIGDSRLGSMETGASLTRAL 498
            + R+A L +  K  D+PGP++DCV + DG       + W AAVD + TGD S A AM ++ VA++    S+  +LNYA+NVYD G VLSIV DAG+HGTHVAGIVAAYH       G                   VAPGAQIVS+KIGDSRLG+ ETG  + R +
Sbjct:  187 LARLAVLEDSVKTFDDPGPVYDCVAFFDG-------SYWRAAVDATGTGDFSTANAMANFCVAQEFAKLSDESQLNYALNVYDNGDVLSIVCDAGSHGTHVAGIVAAYHAEDPVNNG-------------------VAPGAQIVSVKIGDSRLGATETGVGICRGI 326          
BLAST of mRNA_P-wetherbeei_contig20107.1.1 vs. uniprot
Match: A0A418E2L4_9STRA (Subtilisin n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A418E2L4_9STRA)

HSP 1 Score: 143 bits (360), Expect = 8.520e-37
Identity = 84/164 (51.22%), Postives = 101/164 (61.59%), Query Frame = 1
Query:    7 RVAQLSECDKEMDEPGPIFDCVVWNDGGGDGDAPATWYAAVDTSETGDLSEAEAMTDYHVARQSKPFSERDRLNYAVNVYDGGAVLSIVVDAGAHGTHVAGIVAAYHPRTSAGAGTXXXXXXXXXXXXXXXXXXVAPGAQIVSLKIGDSRLGSMETGASLTRAL 498
            R+A L    K  ++PGPI+D V + DG         W AAVDTSETGD S + A T+Y VA +   FS+  +LNYA+N+YD G++LSIV DAGAHGTHVAGIVAAYH       G                   VAPGAQIVS+KIGDSRLGSMET   +TR +
Sbjct:  182 RLAVLEANAKSFEDPGPIYDAVAFFDG-------THWRAAVDTSETGDFSSSPAFTNYRVAHEHGKFSDASQLNYALNLYDNGSILSIVCDAGAHGTHVAGIVAAYHEDDPINNG-------------------VAPGAQIVSVKIGDSRLGSMETVLGVTRGV 319          
BLAST of mRNA_P-wetherbeei_contig20107.1.1 vs. uniprot
Match: A0A7S2RCW9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RCW9_9STRA)

HSP 1 Score: 144 bits (362), Expect = 1.070e-36
Identity = 85/162 (52.47%), Postives = 99/162 (61.11%), Query Frame = 1
Query:   19 LSECDKEMD--EPGPIFDCVVWNDGGGDGDAPATWYAAVDTSETGDLSEAEAMTDYHVARQSKPFSERDRLNYAVNVYDGGAVLSIVVDAGAHGTHVAGIVAAYHPRTSAGAGTXXXXXXXXXXXXXXXXXXVAPGAQIVSLKIGDSRLGSMETGASLTRAL 498
            LS+  K++D  +PGP+FD V W+DG         W AA+ +   GDLS+A AM  Y VAR+   FSE D +NY  NV D GAVL+I  DAGAHGTHVAGIV+AYHP      G                   VAPGAQIVSLKIGD+RLGSMETG  L RAL
Sbjct:   99 LSQHGKDVDSVDPGPVFDAVAWHDG-------EEWVAAISSDPDGDLSKAVAMRSYRVAREFSTFSEVDSMNYCFNVCDDGAVLTICADAGAHGTHVAGIVSAYHPDKPEACG-------------------VAPGAQIVSLKIGDTRLGSMETGPGLQRAL 234          
BLAST of mRNA_P-wetherbeei_contig20107.1.1 vs. uniprot
Match: A0A2P4YSN0_9STRA (Tripeptidyl-peptidase n=2 Tax=Phytophthora TaxID=4783 RepID=A0A2P4YSN0_9STRA)

HSP 1 Score: 144 bits (362), Expect = 1.070e-36
Identity = 81/164 (49.39%), Postives = 103/164 (62.80%), Query Frame = 1
Query:    7 RVAQLSECDKEMDEPGPIFDCVVWNDGGGDGDAPATWYAAVDTSETGDLSEAEAMTDYHVARQSKPFSERDRLNYAVNVYDGGAVLSIVVDAGAHGTHVAGIVAAYHPRTSAGAGTXXXXXXXXXXXXXXXXXXVAPGAQIVSLKIGDSRLGSMETGASLTRAL 498
            R+ QL E  K  ++PGPI+D VV+ DG       A W AA+DT ETGD +  +A+T++ V RQ   FS+  +LNY +N+YD G  LS+V D GAHGTHVAGIVAAYHP      G                   VAPGAQIV++KIGD RLGSMET ++L+RA+
Sbjct:  172 RLKQLEELSKNYEDPGPIYDAVVFYDG-------AHWRAALDTKETGDFTGVQALTNFKVERQYATFSDESQLNYVLNIYDEGNTLSVVNDVGAHGTHVAGIVAAYHPDQPECNG-------------------VAPGAQIVAVKIGDGRLGSMETSSALSRAI 309          
BLAST of mRNA_P-wetherbeei_contig20107.1.1 vs. uniprot
Match: A0A485KTC6_9STRA (Aste57867_11347 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KTC6_9STRA)

HSP 1 Score: 144 bits (362), Expect = 1.080e-36
Identity = 81/164 (49.39%), Postives = 102/164 (62.20%), Query Frame = 1
Query:    7 RVAQLSECDKEMDEPGPIFDCVVWNDGGGDGDAPATWYAAVDTSETGDLSEAEAMTDYHVARQSKPFSERDRLNYAVNVYDGGAVLSIVVDAGAHGTHVAGIVAAYHPRTSAGAGTXXXXXXXXXXXXXXXXXXVAPGAQIVSLKIGDSRLGSMETGASLTRAL 498
            R+A L +  K  ++PGPI+DCV + DG         W AA+DT+ETGD + + AMT+Y VA +   FS+  +LNYA+N+YD G VLSIV DAG+HGTHVAGIVAAYH       G                   VAPGAQIVS+KIGD R+GSMET   +TR +
Sbjct:  223 RLAVLEDNSKSFEDPGPIYDCVAFFDG-------THWRAAIDTTETGDFTASAAMTNYRVAHEFAKFSDASQLNYALNIYDDGNVLSIVADAGSHGTHVAGIVAAYHKDDPINNG-------------------VAPGAQIVSVKIGDRRMGSMETVVGVTRGV 360          
BLAST of mRNA_P-wetherbeei_contig20107.1.1 vs. uniprot
Match: W4HE85_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4HE85_9STRA)

HSP 1 Score: 143 bits (361), Expect = 1.460e-36
Identity = 85/164 (51.83%), Postives = 101/164 (61.59%), Query Frame = 1
Query:    7 RVAQLSECDKEMDEPGPIFDCVVWNDGGGDGDAPATWYAAVDTSETGDLSEAEAMTDYHVARQSKPFSERDRLNYAVNVYDGGAVLSIVVDAGAHGTHVAGIVAAYHPRTSAGAGTXXXXXXXXXXXXXXXXXXVAPGAQIVSLKIGDSRLGSMETGASLTRAL 498
            R+A L    K  ++PGPI+D V + DG         W AAVDTSETGD S + A T+Y VA +   FS+  +LNYA+N+YD G+VLSIV DAGAHGTHVAGIVAAYH       G                   VAPGAQIVS+KIGDSRLGSMET   +TR +
Sbjct:  172 RLAVLEANAKSFEDPGPIYDAVAFFDG-------THWRAAVDTSETGDFSSSPAFTNYRVAHEHGKFSDASQLNYALNLYDNGSVLSIVCDAGAHGTHVAGIVAAYHEDDPINNG-------------------VAPGAQIVSVKIGDSRLGSMETVLGVTRGV 309          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20107.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4D9D6J9_9STRA4.900e-3851.52Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7U693_9STRA5.780e-3850.91Subtilisin n=1 Tax=Nannochloropsis gaditana TaxID=... [more]
A0A1W0A3Y9_9STRA5.780e-3750.00Tripeptidyl-peptidase n=1 Tax=Thraustotheca clavat... [more]
D8LMK5_ECTSI5.830e-3753.01Similar to tripeptidylpeptidase II n=2 Tax=Ectocar... [more]
A0A3L6VQH8_9STRA6.150e-3748.19Subtilisin n=1 Tax=Aphanomyces astaci TaxID=112090... [more]
A0A418E2L4_9STRA8.520e-3751.22Subtilisin n=1 Tax=Aphanomyces astaci TaxID=112090... [more]
A0A7S2RCW9_9STRA1.070e-3652.47Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A2P4YSN0_9STRA1.070e-3649.39Tripeptidyl-peptidase n=2 Tax=Phytophthora TaxID=4... [more]
A0A485KTC6_9STRA1.080e-3649.39Aste57867_11347 protein n=1 Tax=Aphanomyces stella... [more]
W4HE85_9STRA1.460e-3651.83Uncharacterized protein n=9 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20107contigP-wetherbeei_contig20107:37..685 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LMK5
Preferred nameTPP2
PFAMsPeptidase_S8,TPPII,TPPII_N
Model size498
Max annot lvl2759|Eukaryota
KEGG koko:K01280
Hectar predicted targeting categoryother localisation
GOsGO:0000209,GO:0003674,GO:0003824,GO:0004175,GO:0004177,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005773,GO:0005774,GO:0005829,GO:0005840,GO:0006464,GO:0006508,GO:0006807,GO:0008150,GO:0008152,GO:0008233,GO:0008236,GO:0008238,GO:0008240,GO:0009507,GO:0009536,GO:0009987,GO:0010883,GO:0010884,GO:0016020,GO:0016043,GO:0016567,GO:0016604,GO:0016787,GO:0017171,GO:0019538,GO:0022607,GO:0022626,GO:0031090,GO:0031974,GO:0031981,GO:0032446,GO:0032879,GO:0032991,GO:0033218,GO:0036211,GO:0042277,GO:0042802,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044428,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044451,GO:0044464,GO:0048518,GO:0050789,GO:0051259,GO:0051260,GO:0065003,GO:0065007,GO:0065008,GO:0070011,GO:0070013,GO:0070647,GO:0071704,GO:0071840,GO:0098588,GO:0098805,GO:0140096,GO:1901564,GO:1905952,GO:1905954,GO:1990904
Exons2
Evalue9.57e-38
EggNOG OGsCOG1404@1|root,KOG1114@2759|Eukaryota
EC3.4.14.10
Descriptiontripeptidyl-peptidase activity
Cds size498
COG categoryO
BRITEko00000,ko01000,ko01002,ko03110
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186191.1636255-CDS-P-wetherbeei_contig20107:36..2191683186191.1636255-CDS-P-wetherbeei_contig20107:36..219Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20107 37..219 +
1683186191.1760068-CDS-P-wetherbeei_contig20107:370..6851683186191.1760068-CDS-P-wetherbeei_contig20107:370..685Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20107 371..685 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20107.1.1prot_P-wetherbeei_contig20107.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20107 37..685 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20107.1.1

>prot_P-wetherbeei_contig20107.1.1 ID=prot_P-wetherbeei_contig20107.1.1|Name=mRNA_P-wetherbeei_contig20107.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=166bp
MKRVAQLSECDKEMDEPGPIFDCVVWNDGGGDGDAPATWYAAVDTSETGD
LSEAEAMTDYHVARQSKPFSERDRLNYAVNVYDGGAVLSIVVDAGAHGTH
VAGIVAAYHPRTSAGAGTGTGTGGGCDGGGDGERDGVAPGAQIVSLKIGD
SRLGSMETGASLTRAL
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mRNA from alignment at P-wetherbeei_contig20107:37..685+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20107.1.1 ID=mRNA_P-wetherbeei_contig20107.1.1|Name=mRNA_P-wetherbeei_contig20107.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=649bp|location=Sequence derived from alignment at P-wetherbeei_contig20107:37..685+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAAAGGGTGGCCCAGCTGAGCGAATGCGACAAAGAGATGGACGAGCC AGGGCCCATCTTCGACTGCGTCGTTTGGAACGACGGCGGCGGCGACGGTG ATGCCCCGGCAACGTGGTACGCCGCCGTAGACACCTCTGAGACCGGTGAC CTCAGCGAGGCGGAGGCCATGACGGACTACCACGTAAGAGCTTCCGATAG AGAGTGCTTCGATAAGTCTCCTTTTTCCCGTTTCCCCCGTTAGTATTCCT GTTTTCGTGTTTCCTCTCTGCTGATTTCAGACTTCCTTTTTTCTGAATCT TGGTTGGTTTGCATTTCCTGCCAAACATTCACAGGTGGCGCGGCAGTCCA AGCCGTTCTCGGAGCGCGACCGGCTCAACTACGCCGTCAACGTCTACGAC GGCGGCGCCGTCCTCTCCATCGTCGTTGACGCCGGCGCCCACGGCACCCA CGTCGCCGGCATCGTCGCCGCCTACCACCCCAGAACCTCCGCCGGTGCCG GCACCGGCACCGGCACTGGCGGCGGCTGCGACGGCGGCGGGGACGGGGAA CGGGACGGGGTGGCGCCAGGGGCGCAGATCGTATCGCTGAAGATCGGGGA CAGCCGACTGGGCAGTATGGAGACGGGGGCCAGCCTGACGCGGGCGCTC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20107:37..685+

>mRNA_P-wetherbeei_contig20107.1.1 ID=mRNA_P-wetherbeei_contig20107.1.1|Name=mRNA_P-wetherbeei_contig20107.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=498bp|location=Sequence derived from alignment at P-wetherbeei_contig20107:37..685+ (Phaeothamnion wetherbeei SAG_119_79)
ATGAAAAGGGTGGCCCAGCTGAGCGAATGCGACAAAGAGATGGACGAGCC
AGGGCCCATCTTCGACTGCGTCGTTTGGAACGACGGCGGCGGCGACGGTG
ATGCCCCGGCAACGTGGTACGCCGCCGTAGACACCTCTGAGACCGGTGAC
CTCAGCGAGGCGGAGGCCATGACGGACTACCACGTGGCGCGGCAGTCCAA
GCCGTTCTCGGAGCGCGACCGGCTCAACTACGCCGTCAACGTCTACGACG
GCGGCGCCGTCCTCTCCATCGTCGTTGACGCCGGCGCCCACGGCACCCAC
GTCGCCGGCATCGTCGCCGCCTACCACCCCAGAACCTCCGCCGGTGCCGG
CACCGGCACCGGCACTGGCGGCGGCTGCGACGGCGGCGGGGACGGGGAAC
GGGACGGGGTGGCGCCAGGGGCGCAGATCGTATCGCTGAAGATCGGGGAC
AGCCGACTGGGCAGTATGGAGACGGGGGCCAGCCTGACGCGGGCGCTC
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