mRNA_P-wetherbeei_contig20104.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20104.1.1 vs. uniprot
Match: A0A4Z0C3B2_9BURK (RidA family protein n=1 Tax=Ramlibacter rhizophilus TaxID=1781167 RepID=A0A4Z0C3B2_9BURK) HSP 1 Score: 117 bits (293), Expect = 2.220e-31 Identity = 64/128 (50.00%), Postives = 86/128 (67.19%), Query Frame = 1
Query: 4 LKALNPATIAPPAGKYQLAVEVPAGARMLFISGQLGLKPDGTLAKGIEGQADAVWANIKAILAEAGMSFADLVKVNILLIDAGDILPSRAARDRALGSTRPPASTLAVIKALAAPEYLIEIEAIAAKA 387
LKALNP ++A P G Y AV P+G R L +SGQ+G++PDG++ + EGQA+ W N+ A+L+EAGM DLVKV+ L DA + R + LG RP ASTL V+ ALA P++ +E+EAIA KA
Sbjct: 5 LKALNPPSVAAPGGPYSQAVLAPSGGRWLHVSGQVGVRPDGSIPEHFEGQAEVCWQNLVALLSEAGMGVQDLVKVSTFLTDAAQVARLGPVRAKFLGDARP-ASTLVVVAALARPQWQVEVEAIAWKA 131
BLAST of mRNA_P-wetherbeei_contig20104.1.1 vs. uniprot
Match: A0A536YL67_9PROT (RidA family protein n=8 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536YL67_9PROT) HSP 1 Score: 117 bits (293), Expect = 4.080e-31 Identity = 66/129 (51.16%), Postives = 86/129 (66.67%), Query Frame = 1
Query: 1 MLKALNPATIAPPAGKYQLAVEVPAGARMLFISGQLGLKPDGTLAKGIEGQADAVWANIKAILAEAGMSFADLVKVNILLIDAGDILPSRAARDRALGSTRPPASTLAVIKALAAPEYLIEIEAIAAKA 387
MLK NP +IA P G Y L +EVP GAR L ++GQ+G++PDG++ IE Q + VW NI A+LA+AGM D+VK+ L + R + LGS RP ASTL VI +LA PE+L+E+EAIAAKA
Sbjct: 1 MLKVHNPRSIAAPIGTYSLGIEVPPGARWLHVAGQIGVRPDGSVPSTIEEQTEVVWQNILAVLADAGMGIGDVVKITSFLTRHENFPSFAQVRAKFLGSHRP-ASTLLVISSLARPEFLVEVEAIAAKA 128
BLAST of mRNA_P-wetherbeei_contig20104.1.1 vs. uniprot
Match: A0A2D6FYT1_9PROT (Enamine deaminase RidA n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D6FYT1_9PROT) HSP 1 Score: 115 bits (289), Expect = 8.480e-31 Identity = 66/128 (51.56%), Postives = 82/128 (64.06%), Query Frame = 1
Query: 1 MLKALNPATIAPPAGKYQLAVEVPAGARMLFISGQLGLKPDGTLAKGIEGQADAVWANIKAILAEAGMSFADLVKVNILLIDAGDILPSRAARDRALGSTRPPASTLAVIKALAAPEYLIEIEAIAAK 384
M K NP + PP Y A VPAGA +LFISGQLG+KPDG L GIE QA+ + NI AILA G+S ADLVK+ + L D P+ AR + G +P STL ++ LAAPE+LIE+E IAA+
Sbjct: 1 MTKFFNPEGVTPPVAAYTHAALVPAGAELLFISGQLGIKPDGDLGDGIEEQAEWAYRNIAAILASEGLSPADLVKMQMFLTDRAYRAPAGEARQKVFGDAKP-TSTLLIVAGLAAPEFLIEVEGIAAR 127
BLAST of mRNA_P-wetherbeei_contig20104.1.1 vs. uniprot
Match: A0A4Q2R6B3_9HYPH (RidA family protein n=1 Tax=Lichenibacterium ramalinae TaxID=2316527 RepID=A0A4Q2R6B3_9HYPH) HSP 1 Score: 115 bits (288), Expect = 1.270e-30 Identity = 66/129 (51.16%), Postives = 84/129 (65.12%), Query Frame = 1
Query: 1 MLKALNPATIAPPAGKYQLAVEVPAGARMLFISGQLGLKPDGTLAKGIEGQADAVWANIKAILAEAGMSFADLVKVNILLIDAGDILPSRAARDRAL-GSTRPPASTLAVIKALAAPEYLIEIEAIAAK 384
ML L PA + PP +Y V VPAGAR +F SGQLG+ PDG + +EGQA +A I AILAEAGM ADLV++N + D+ AARDRAL G PPASTL ++ PE+L+E+EA+AA+
Sbjct: 1 MLARLAPAALHPPFARYAHGVAVPAGARTVFCSGQLGIAPDGAVPADVEGQAALCFAAIAAILAEAGMGLADLVRLNAYVTRRQDMAGYMAARDRALPGDAPPPASTLMIVGGFTRPEFLVEVEAVAAR 129
BLAST of mRNA_P-wetherbeei_contig20104.1.1 vs. uniprot
Match: A0A512NGQ8_9HYPH (Enamine deaminase RidA n=2 Tax=Reyranella soli TaxID=1230389 RepID=A0A512NGQ8_9HYPH) HSP 1 Score: 115 bits (288), Expect = 1.310e-30 Identity = 65/123 (52.85%), Postives = 85/123 (69.11%), Query Frame = 1
Query: 16 NPATIAPPAGKYQLAVEVPAGARMLFISGQLGLKPDGTLAKGIEGQADAVWANIKAILAEAGMSFADLVKVNILLIDAGDILPSRAARDRALGSTRPPASTLAVIKALAAPEYLIEIEAIAAK 384
NP ++A AGKY LA EVPAGAR++F++GQ+GL G LA GIE Q D VW NI +L A M+F D+VK+N L D I+ +RAARD+ +G P +STL +++ LA P L+EIE IAAK
Sbjct: 12 NPKSVAL-AGKYSLAAEVPAGARVVFVAGQVGLDGSGKLADGIEAQCDQVWKNIGEVLKAADMTFKDIVKINSFLTDGRFIMANRAARDKVIGEPYP-SSTLLIVQGLADPAMLVEIEVIAAK 132
BLAST of mRNA_P-wetherbeei_contig20104.1.1 vs. uniprot
Match: A0A536TMA2_9PROT (RidA family protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536TMA2_9PROT) HSP 1 Score: 115 bits (288), Expect = 2.330e-30 Identity = 65/129 (50.39%), Postives = 85/129 (65.89%), Query Frame = 1
Query: 1 MLKALNPATIAPPAGKYQLAVEVPAGARMLFISGQLGLKPDGTLAKGIEGQADAVWANIKAILAEAGMSFADLVKVNILLIDAGDILPSRAARDRALGSTRPPASTLAVIKALAAPEYLIEIEAIAAKA 387
ML NP +IA P G Y +EVP GAR L+++GQ+G++PDG++ IE Q + VW NI A+LA+AGM D+VK+ L + R R LGS RP ASTL VI +LA PE+L+E+EAIAAKA
Sbjct: 1 MLNVHNPRSIAAPIGTYSHGIEVPPGARWLYVAGQIGVRPDGSVPASIEEQTELVWQNILAVLADAGMGIGDVVKITSFLTRHENFQRFAQVRARFLGSHRP-ASTLLVISSLARPEFLVEVEAIAAKA 128
BLAST of mRNA_P-wetherbeei_contig20104.1.1 vs. uniprot
Match: A0A3S2WCY6_9PROT (RidA family protein n=1 Tax=Hwanghaeella grinnelliae TaxID=2500179 RepID=A0A3S2WCY6_9PROT) HSP 1 Score: 114 bits (284), Expect = 5.000e-30 Identity = 64/127 (50.39%), Postives = 79/127 (62.20%), Query Frame = 1
Query: 4 LKALNPATIAPPAGKYQLAVEVPAGARMLFISGQLGLKPDGTLAKGIEGQADAVWANIKAILAEAGMSFADLVKVNILLIDAGDILPSRAARDRALGSTRPPASTLAVIKALAAPEYLIEIEAIAAK 384
L NP TIA P +Y AVE+P AR LFISGQ+GL PDG + E Q++ VW N+KAIL AGM DLV+VN + DA + R RD+ L PASTL V+ LA P+ IE+EA+AAK
Sbjct: 3 LTIYNPDTIAAPLARYSHAVEIPKDARALFISGQVGLTPDGAMPDSAEEQSENVWLNLKAILENAGMGLEDLVRVNAYITDARYVAAYRTGRDKVLTDGIAPASTLVVVSGLADPKMKIEVEAVAAK 129
BLAST of mRNA_P-wetherbeei_contig20104.1.1 vs. uniprot
Match: A0A2W4QSL9_9PROT (Enamine deaminase RidA n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4QSL9_9PROT) HSP 1 Score: 113 bits (283), Expect = 6.500e-30 Identity = 64/127 (50.39%), Postives = 84/127 (66.14%), Query Frame = 1
Query: 1 MLKALNPATIAPPAGKYQLAVEVPAGARMLFISGQLGLKPDGTLAKGIEGQADAVWANIKAILAEAGMSFADLVKVNILLIDAGDILPSRAARDRALGSTRPPASTLAVIKALAAPEYLIEIEAIAA 381
MLKAL+PA+I PP +Y +EVPAG R++ SGQLG++PD T+ E QA+ +ANI AILAEAGM ++V++N + D + AARDR T PPASTL ++ PE+ IEIEAIAA
Sbjct: 1 MLKALSPASIRPPFARYSHGIEVPAGKRLVVCSGQLGIRPDDTIPDDAEEQAELCFANIAAILAEAGMGLGNVVRINAYVSDRAHMQGYMAARDRLFTGT-PPASTLIIVSGFTRPEFKIEIEAIAA 126
BLAST of mRNA_P-wetherbeei_contig20104.1.1 vs. uniprot
Match: A0A1F4DR78_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_62_58 TaxID=1797497 RepID=A0A1F4DR78_9PROT) HSP 1 Score: 113 bits (282), Expect = 9.490e-30 Identity = 62/128 (48.44%), Postives = 82/128 (64.06%), Query Frame = 1
Query: 1 MLKALNPATIAPPAGKYQLAVEVPAGARMLFISGQLGLKPDGTLAKGIEGQADAVWANIKAILAEAGMSFADLVKVNILLIDAGDILPSRAARDRALGSTRPPASTLAVIKALAAPEYLIEIEAIAAK 384
M + +P TIAPPA Y +EVP AR+LF++GQ G++PDG++ IE Q+D VW NI AIL E GM DL+KV + A ++ A RD+ L RP +TL V+ LA EYL+E+EAIAAK
Sbjct: 1 MFRTFSPKTIAPPAATYVHGLEVPPNARLLFVAGQTGMRPDGSVPGSIEEQSDQVWKNISAILTEGGMGIGDLIKVTSFVTKAENLKKYGAVRDKYLRDHRP-TTTLLVVSGLARQEYLVEVEAIAAK 127
BLAST of mRNA_P-wetherbeei_contig20104.1.1 vs. uniprot
Match: A0A0Q3I270_9HYPH (Enamine deaminase RidA n=2 Tax=Bosea TaxID=85413 RepID=A0A0Q3I270_9HYPH) HSP 1 Score: 111 bits (277), Expect = 5.280e-29 Identity = 61/126 (48.41%), Postives = 82/126 (65.08%), Query Frame = 1
Query: 4 LKALNPATIAPPAGKYQLAVEVPAGARMLFISGQLGLKPDGTLAKGIEGQADAVWANIKAILAEAGMSFADLVKVNILLIDAGDILPSRAARDRALGSTRPPASTLAVIKALAAPEYLIEIEAIAA 381
+K LNPA IAPP +Y +E+PAG R+ F SGQLG+ DGT+ + QAD +ANI AILAEAGM+ AD+V+VN + D + +RD +G T PPASTL ++ PE+ +EIE +AA
Sbjct: 1 MKPLNPAAIAPPFARYSHGMELPAGRRLAFCSGQLGIAADGTVPDDVRAQADLCFANIAAILAEAGMTLADIVRVNAYVTDRAYMKGYMESRDAHVG-TPPPASTLMIVSGFTRPEFKVEIEVVAA 125 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20104.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20104.1.1 >prot_P-wetherbeei_contig20104.1.1 ID=prot_P-wetherbeei_contig20104.1.1|Name=mRNA_P-wetherbeei_contig20104.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=130bp MLKALNPATIAPPAGKYQLAVEVPAGARMLFISGQLGLKPDGTLAKGIEGback to top mRNA from alignment at P-wetherbeei_contig20104:194..583- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20104.1.1 ID=mRNA_P-wetherbeei_contig20104.1.1|Name=mRNA_P-wetherbeei_contig20104.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=390bp|location=Sequence derived from alignment at P-wetherbeei_contig20104:194..583- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20104:194..583- >mRNA_P-wetherbeei_contig20104.1.1 ID=mRNA_P-wetherbeei_contig20104.1.1|Name=mRNA_P-wetherbeei_contig20104.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=390bp|location=Sequence derived from alignment at P-wetherbeei_contig20104:194..583- (Phaeothamnion wetherbeei SAG_119_79)back to top |