mRNA_P-wetherbeei_contig20083.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20083.1.1
Unique NamemRNA_P-wetherbeei_contig20083.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20083.1.1 vs. uniprot
Match: A0A536Y253_9PROT (MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit n=5 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536Y253_9PROT)

HSP 1 Score: 447 bits (1149), Expect = 4.180e-153
Identity = 253/338 (74.85%), Postives = 288/338 (85.21%), Query Frame = 1
Query:    4 PVVAVPAAKKDVNVYLTGLGTVTPLKTVTVRSRVDGQLMRVLFREGQLVREGELLAEIDPRPFQAALMQYEGQMARDQALLANARIDLDRYRVLLAQDSIAKQLVDTQEALVXXXXXXXXXXXXXXXXXXXXXTYSRVTAPIPGRLGLRQVDMGNIVRSSDANGLVVITQLQPVTVIYTIAQDNLQVVLKRMQSGERVPVDAFDRDQKVKLASGTLLTVDNQIDTTTGTVKLKAQFANDDAKLFPNQFVNVRMLIDTRTEVTTVPSAALQRGARGLFVYVVKEDRTVTLRDVKTGPAENDATVIESGIEPGELVVTDGMDRLREGAKVELPSKDAAAS 1017
            PVVA  A   DVNVYL+GLGTVTPLKTVTVRSRVDG+L++VLF+EGQ V+EG+LLAEIDPRP+QA LMQ+EGQMARDQALLANARID +RYR L AQDSIAKQ VDTQEALVXXXXXXXXXXXXXXXXXX   TYSR+TAPI GRLGLR VD GNIVRS DANGLVVITQLQP+T I+TI QDNL  V++R++SGER+PV+A+DR+QK KLASGTL +VDNQID  TGT+KLKAQF N+DA LFPNQFVNVRML+DTR   T VP+AA+ RG +G FVYVVKEDRTV LR V  G AE D   +ESG+ PGELVV +G DRLR+GAKVE+P + A A+
Sbjct:   84 PVVAAAARTGDVNVYLSGLGTVTPLKTVTVRSRVDGELVKVLFKEGQAVKEGDLLAEIDPRPYQAQLMQFEGQMARDQALLANARIDFERYRTLYAQDSIAKQQVDTQEALVXXXXXXXXXXXXXXXXXXLQVTYSRITAPISGRLGLRLVDPGNIVRSGDANGLVVITQLQPITAIFTIPQDNLPNVMQRLRSGERLPVEAYDREQKKKLASGTLTSVDNQIDPATGTIKLKAQFPNEDASLFPNQFVNVRMLLDTRRGATLVPNAAVVRGGQGTFVYVVKEDRTVELRKVSVGVAEGDGLSVESGLAPGELVVVEGSDRLRDGAKVEIPDRAARAA 421          
BLAST of mRNA_P-wetherbeei_contig20083.1.1 vs. uniprot
Match: A0A536YP86_9PROT (MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit n=4 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536YP86_9PROT)

HSP 1 Score: 444 bits (1141), Expect = 5.970e-152
Identity = 234/343 (68.22%), Postives = 275/343 (80.17%), Query Frame = 1
Query:    4 PVVAVPAAKKDVNVYLTGLGTVTPLKTVTVRSRVDGQLMRVLFREGQLVREGELLAEIDPRPFQAALMQYEGQMARDQALLANARIDLDRYRVLLAQDSIAKQLVDTQEALVXXXXXXXXXXXXXXXXXXXXXTYSRVTAPIPGRLGLRQVDMGNIVRSSDANGLVVITQLQPVTVIYTIAQDNLQVVLKRMQSGERVPVDAFDRDQKVKLASGTLLTVDNQIDTTTGTVKLKAQFANDDAKLFPNQFVNVRMLIDTRTEVTTVPSAALQRGARGLFVYVVKEDRTVTLRDVKTGPAENDATVIESGIEPGELVVTDGMDRLREGAKVELPSKDA-AASGKGG 1029
            P++A  A   DVN+YL+GLGTVTPLKTVTVRSRVDG+L+RVLF+EGQ+V+EG+LLAEIDPRP+QA L Q+ GQMARDQALLANARIDL+RYR L  QDSIAKQ VDTQEALV                      Y+R+TAP+ GRLGLR VD GNIVRS DANGLVVITQLQP+TV++TI QDNL  +++R++SGER+PV+A+DR QKVKLASG LLTVDNQID +TGTVKLKAQF N+DA LFPNQFVNVRML+DTR + T VP+A++ RG +G FVYVVKEDRTV LR V  G AE D   +ESG+ PGELVV +G DRLR+GAKVE+P + A AA GKGG
Sbjct:   79 PILAAAARTGDVNIYLSGLGTVTPLKTVTVRSRVDGELVRVLFKEGQVVKEGDLLAEIDPRPYQAQLAQFGGQMARDQALLANARIDLERYRTLYTQDSIAKQQVDTQEALVRQYEGTVKADQGQVDNVRLQLAYARITAPVGGRLGLRLVDPGNIVRSGDANGLVVITQLQPITVVFTIPQDNLPSLMQRLRSGERLPVEAYDRQQKVKLASGALLTVDNQIDPSTGTVKLKAQFPNEDAGLFPNQFVNVRMLLDTRRDATLVPNASVVRGGQGTFVYVVKEDRTVELRKVSVGMAEGDDLSVESGLAPGELVVVEGSDRLRDGAKVEIPDRAASAAPGKGG 421          
BLAST of mRNA_P-wetherbeei_contig20083.1.1 vs. uniprot
Match: A0A536SPX7_9PROT (MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536SPX7_9PROT)

HSP 1 Score: 433 bits (1114), Expect = 4.170e-148
Identity = 242/338 (71.60%), Postives = 284/338 (84.02%), Query Frame = 1
Query:    4 PVVAVPAAKKDVNVYLTGLGTVTPLKTVTVRSRVDGQLMRVLFREGQLVREGELLAEIDPRPFQAALMQYEGQMARDQALLANARIDLDRYRVLLAQDSIAKQLVDTQEALVXXXXXXXXXXXXXXXXXXXXXTYSRVTAPIPGRLGLRQVDMGNIVRSSDANGLVVITQLQPVTVIYTIAQDNLQVVLKRMQSGERVPVDAFDRDQKVKLASGTLLTVDNQIDTTTGTVKLKAQFANDDAKLFPNQFVNVRMLIDTRTEVTTVPSAALQRGARGLFVYVVKEDRTVTLRDVKTGPAENDATVIESGIEPGELVVTDGMDRLREGAKVELPSKDAAAS 1017
            PVVA  A    +N+YL GLGTVTPLKTVTVRSRVDG+L++V FREGQ+V EG+LLAEIDPRP+QA L Q+EGQMARDQALLANARID++RYR L AQDSIAKQ VDTQEALV XXXXXXXXXXXXXXXXX   TYSR+TAP  GRLGLR VD GNIVR+ DANGLVVITQLQP+T I+TI QD+L  V++R++SGE++PVDA+DR+QK KLA+GTLL+VDNQID  TGT++LKAQF N D  LFPNQFVNVRML+DTR E T VP+AA+ RG +G FVYV+ EDRTV LR V  G AE D+  +ESG+ PGELVV +G DRLR+GAKVE+P + A+A+
Sbjct:   62 PVVAAAARSGAINIYLNGLGTVTPLKTVTVRSRVDGELVKVSFREGQVVTEGDLLAEIDPRPYQAQLTQFEGQMARDQALLANARIDVERYRTLYAQDSIAKQQVDTQEALVRXXXXXXXXXXXXXXXXXLQLTYSRITAPSSGRLGLRLVDAGNIVRAGDANGLVVITQLQPITAIFTIPQDSLPGVMQRLRSGEKLPVDAYDREQKKKLAAGTLLSVDNQIDPATGTIRLKAQFPNGDGNLFPNQFVNVRMLLDTRREATLVPNAAVVRGGQGTFVYVINEDRTVALRKVVAGMAEGDSVSVESGLAPGELVVVEGSDRLRDGAKVEIPDRAASAA 399          
BLAST of mRNA_P-wetherbeei_contig20083.1.1 vs. uniprot
Match: UPI000550EDE4 (MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit n=1 Tax=Herbaspirillum sp. RV1423 TaxID=1443993 RepID=UPI000550EDE4)

HSP 1 Score: 410 bits (1053), Expect = 2.700e-137
Identity = 225/329 (68.39%), Postives = 272/329 (82.67%), Query Frame = 1
Query:    4 PVVAVPAAKKDVNVYLTGLGTVTPLKTVTVRSRVDGQLMRVLFREGQLVREGELLAEIDPRPFQAALMQYEGQMARDQALLANARIDLDRYRVLLAQDSIAKQLVDTQEALVXXXXXXXXXXXXXXXXXXXXXTYSRVTAPIPGRLGLRQVDMGNIVRSSDANGLVVITQLQPVTVIYTIAQDNLQVVLKRMQSGERVPVDAFDRDQKVKLASGTLLTVDNQIDTTTGTVKLKAQFANDDAKLFPNQFVNVRMLIDTRTEVTTVPSAALQRGARGLFVYVVKEDRTVTLRDVKTGPAENDATVIESGIEPGELVVTDGMDRLREGAKVE 990
            PV    A   DV++YLTGLG VTP  T TVRSRVDGQLM++ F+EGQLV+EG+LLAE+DPRP+Q A+ Q EGQ+ARDQALL+ A++DL RYR LL QDSIA Q VDTQ ALV XXXXXXXXXXXXXXXXX   TYSRVTAP+ GRLGLRQVD+GNIV SSD NG+V+ITQ+QP+TV+++I +DN+  V+K++Q+G+++  DA+DRDQK KLA G LLT+DNQ+D TTGTVKLKAQF N D  LFPNQFVN+RML+D R   T +P+AA+QRG++GLFVYVVK D TVT+R+VKTGPA+ D T IE G+  GE VV DG+DRLREGAKVE
Sbjct:   88 PVGVAVARTSDVDIYLTGLGGVTPTATATVRSRVDGQLMKLHFKEGQLVKEGDLLAELDPRPYQVAVTQAEGQLARDQALLSAAQLDLKRYRTLLEQDSIASQQVDTQAALVKXXXXXXXXXXXXXXXXXLQLTYSRVTAPVSGRLGLRQVDIGNIVHSSDTNGIVIITQVQPITVVFSIPEDNIPAVMKQLQAGKKLATDAWDRDQKNKLAGGMLLTIDNQVDATTGTVKLKAQFPNTDYALFPNQFVNIRMLLDVRQGATVIPTAAIQRGSKGLFVYVVKSDNTVTVRNVKTGPAQGDITAIEDGVASGETVVVDGIDRLREGAKVE 416          
BLAST of mRNA_P-wetherbeei_contig20083.1.1 vs. uniprot
Match: A0A5F0LAN9_9BURK (MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit n=6 Tax=Herbaspirillum TaxID=963 RepID=A0A5F0LAN9_9BURK)

HSP 1 Score: 409 bits (1050), Expect = 6.130e-137
Identity = 225/329 (68.39%), Postives = 273/329 (82.98%), Query Frame = 1
Query:    4 PVVAVPAAKKDVNVYLTGLGTVTPLKTVTVRSRVDGQLMRVLFREGQLVREGELLAEIDPRPFQAALMQYEGQMARDQALLANARIDLDRYRVLLAQDSIAKQLVDTQEALVXXXXXXXXXXXXXXXXXXXXXTYSRVTAPIPGRLGLRQVDMGNIVRSSDANGLVVITQLQPVTVIYTIAQDNLQVVLKRMQSGERVPVDAFDRDQKVKLASGTLLTVDNQIDTTTGTVKLKAQFANDDAKLFPNQFVNVRMLIDTRTEVTTVPSAALQRGARGLFVYVVKEDRTVTLRDVKTGPAENDATVIESGIEPGELVVTDGMDRLREGAKVE 990
            PV    A   DVN+YLTGLG VTP  T TVRSRVDGQLM++ F+EGQLV+EG+LLAE+D RP+Q A+ Q EGQ+ARDQA L  A++DL RYR LL+QDSIA Q VDTQ ALV XXXXXXXXXXXXXXXXXX  TYSRVTAP+ GRLGLRQVD+GNIV SSD NG+V+ITQ+QP+T +++I +DN+  V+K++Q+G+++  DA+DRDQK KLASG LLT+DNQ+D TTGT+KLKAQF N D  LFPNQFVN+RML+DTR +  T+P+AALQRG++GLF+YVVK D TVT+R+VKTGPA+ D T IE G+  GE VV DG+DRLREGAKVE
Sbjct:   66 PVGVAVAKISDVNIYLTGLGGVTPTATATVRSRVDGQLMKLHFKEGQLVKEGDLLAELDARPYQVAVTQAEGQLARDQAQLGAAQLDLKRYRTLLSQDSIAGQQVDTQAALVKXXXXXXXXXXXXXXXXXXQLTYSRVTAPVSGRLGLRQVDIGNIVHSSDTNGIVIITQVQPITAVFSIPEDNIPAVMKQLQAGKKLATDAWDRDQKNKLASGVLLTIDNQVDATTGTIKLKAQFPNTDYALFPNQFVNIRMLLDTRKDAITIPTAALQRGSKGLFIYVVKSDNTVTVRNVKTGPAQGDITAIEDGVASGETVVVDGIDRLREGAKVE 394          
BLAST of mRNA_P-wetherbeei_contig20083.1.1 vs. uniprot
Match: A0A536ZKP7_9PROT (MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536ZKP7_9PROT)

HSP 1 Score: 405 bits (1040), Expect = 1.070e-136
Identity = 214/336 (63.69%), Postives = 258/336 (76.79%), Query Frame = 1
Query:    1 MPVVAVPAAKKDVNVYLTGLGTVTPLKTVTVRSRVDGQLMRVLFREGQLVREGELLAEIDPRPFQAALMQYEGQMARDQALLANARIDLDRYRVLLAQDSIAKQLVDTQEALVXXXXXXXXXXXXXXXXXXXXXTYSRVTAPIPGRLGLRQVDMGNIVRSSDANGLVVITQLQPVTVIYTIAQDNLQVVLKRMQSGERVPVDAFDRDQKVKLASGTLLTVDNQIDTTTGTVKLKAQFANDDAKLFPNQFVNVRMLIDTRTEVTTVPSAALQRGARGLFVYVVKEDRTVTLRDVKTGPAENDATVIESGIEPGELVVTDGMDRLREGAKVELPSKDA 1008
            +PVVA PA +  ++VYL+ LGTVTP   VTVRSRVDGQLM+V FREGQLV+ GELLAEIDPRPF+  L Q +GQ+A+DQALL NA++DL+RYR LL+QDSI+KQ VDTQE+LV                      YSRVTAPI G +GLRQVD GNI+ +SD +GLVVITQLQP+TVI+ I +DNL  V+ R++SG  V VDA+DR QK KLA+G LLT DNQIDTTTGTVKL+A+FANDD+ LFPNQFVNVRM  +TRT  T VPSAA+ RGA G FVY+VK+D +VT+  VK GP + + T IESGI PG+LVV DG D+LREGAKVEL + +A
Sbjct:   69 LPVVAAPARQGSIDVYLSALGTVTPRNMVTVRSRVDGQLMQVAFREGQLVKTGELLAEIDPRPFEVQLTQAQGQLAKDQALLKNAQLDLERYRTLLSQDSISKQQVDTQESLVRQYEGTVKADQGQVDNAKLQLVYSRVTAPISGVVGLRQVDPGNIIHASDTSGLVVITQLQPITVIFPIPEDNLPQVVARLKSGTPVSVDAWDRAQKTKLATGKLLTFDNQIDTTTGTVKLRAEFANDDSALFPNQFVNVRMAAETRTGATLVPSAAVLRGAPGTFVYLVKDDHSVTVAPVKLGPVQGETTAIESGIAPGDLVVVDGTDKLREGAKVELITPEA 404          
BLAST of mRNA_P-wetherbeei_contig20083.1.1 vs. uniprot
Match: J3DB21_9BURK (RND family efflux transporter, MFP subunit n=3 Tax=Herbaspirillum TaxID=963 RepID=J3DB21_9BURK)

HSP 1 Score: 406 bits (1044), Expect = 1.090e-135
Identity = 208/329 (63.22%), Postives = 255/329 (77.51%), Query Frame = 1
Query:    4 PVVAVPAAKKDVNVYLTGLGTVTPLKTVTVRSRVDGQLMRVLFREGQLVREGELLAEIDPRPFQAALMQYEGQMARDQALLANARIDLDRYRVLLAQDSIAKQLVDTQEALVXXXXXXXXXXXXXXXXXXXXXTYSRVTAPIPGRLGLRQVDMGNIVRSSDANGLVVITQLQPVTVIYTIAQDNLQVVLKRMQSGERVPVDAFDRDQKVKLASGTLLTVDNQIDTTTGTVKLKAQFANDDAKLFPNQFVNVRMLIDTRTEVTTVPSAALQRGARGLFVYVVKEDRTVTLRDVKTGPAENDATVIESGIEPGELVVTDGMDRLREGAKVE 990
            PV    A   DVNVYLTGLG VTP  T TVRSRVDGQLM++ F+EGQLV++G+LLAE+D RP++ A+ Q EGQ+ARDQALL  A++DL RYR LLAQDSIA Q VDTQ ALV                     TYSRVTAP+ GR GLRQVD+GNIV SSD +G+V+ITQ+QP+T I++I +DN+  V+K++Q+G+++  DA+DR+QK KLASGTLLT+DNQ+D TTGTVKLKAQF N D  LFPNQFVN+RML+DTR   T +PSAA+QRG++GLFVYVVK+D +VT+R+VKTGP E D T IE G+  GE VV DG+DRLREGAKVE
Sbjct:   90 PVGVALAKTADVNVYLTGLGGVTPTATATVRSRVDGQLMKLHFKEGQLVKQGDLLAELDARPYEVAVTQAEGQLARDQALLNAAQLDLKRYRTLLAQDSIASQQVDTQAALVKQYEGTVKSDQGNLASARLQLTYSRVTAPVSGRTGLRQVDIGNIVHSSDTSGIVIITQVQPITTIFSIPEDNIPAVMKQLQAGKKLATDAWDREQKNKLASGTLLTIDNQVDATTGTVKLKAQFPNTDFALFPNQFVNIRMLLDTRQGATVIPSAAIQRGSKGLFVYVVKQDNSVTVRNVKTGPTEGDVTAIEDGVASGETVVVDGIDRLREGAKVE 418          
BLAST of mRNA_P-wetherbeei_contig20083.1.1 vs. uniprot
Match: A0A536TEE1_9PROT (MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536TEE1_9PROT)

HSP 1 Score: 400 bits (1027), Expect = 9.350e-135
Identity = 209/331 (63.14%), Postives = 253/331 (76.44%), Query Frame = 1
Query:    1 MPVVAVPAAKKDVNVYLTGLGTVTPLKTVTVRSRVDGQLMRVLFREGQLVREGELLAEIDPRPFQAALMQYEGQMARDQALLANARIDLDRYRVLLAQDSIAKQLVDTQEALVXXXXXXXXXXXXXXXXXXXXXTYSRVTAPIPGRLGLRQVDMGNIVRSSDANGLVVITQLQPVTVIYTIAQDNLQVVLKRMQSGERVPVDAFDRDQKVKLASGTLLTVDNQIDTTTGTVKLKAQFANDDAKLFPNQFVNVRMLIDTRTEVTTVPSAALQRGARGLFVYVVKEDRTVTLRDVKTGPAENDATVIESGIEPGELVVTDGMDRLREGAKVEL 993
            +PVVA PA +  ++VY+  LGTVTP   VTV SRVDGQL+R+ FREGQ+VR GELLAEIDPRPF+  L Q +G MARDQALL NA++DL+RYR LL+QDSI+KQ VDTQE+LV                     TY+RVTAPI G +GLRQVD GNIV +SD NGLVVITQLQP+TVI+ I +DNL  V++R+++G  + VDA+DR QKVKLA+G LLT DNQIDTTTGTVKL+A+F NDD+ LFPNQFVNVRM  + R   T VPSAA+ RGA G FVY+VK+DR+VT+  VK GP + + T IESG+ PG+LVV DG D+LREGAKVEL
Sbjct:   68 LPVVAAPARQGSIDVYINALGTVTPRNMVTVHSRVDGQLIRIAFREGQVVRAGELLAEIDPRPFEVQLTQAQGLMARDQALLKNAQLDLERYRTLLSQDSISKQQVDTQESLVRQYEGAVKNDQGQIDNARLQLTYARVTAPIGGVVGLRQVDAGNIVHASDTNGLVVITQLQPITVIFPIPEDNLPQVVQRLKAGNPIAVDAWDRAQKVKLATGKLLTFDNQIDTTTGTVKLRAEFPNDDSALFPNQFVNVRMAAEPRAGATLVPSAAVLRGAPGTFVYLVKDDRSVTVAPVKLGPVQGETTAIESGVAPGDLVVVDGTDKLREGAKVEL 398          
BLAST of mRNA_P-wetherbeei_contig20083.1.1 vs. uniprot
Match: A0A1F3ZTS7_9PROT (Biotin_lipoyl_2 domain-containing protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_64_14 TaxID=1797482 RepID=A0A1F3ZTS7_9PROT)

HSP 1 Score: 401 bits (1030), Expect = 2.120e-134
Identity = 205/333 (61.56%), Postives = 254/333 (76.28%), Query Frame = 1
Query:    4 PVVAVPAAKKDVNVYLTGLGTVTPLKTVTVRSRVDGQLMRVLFREGQLVREGELLAEIDPRPFQAALMQYEGQMARDQALLANARIDLDRYRVLLAQDSIAKQLVDTQEALVXXXXXXXXXXXXXXXXXXXXXTYSRVTAPIPGRLGLRQVDMGNIVRSSDANGLVVITQLQPVTVIYTIAQDNLQVVLKRMQSGERVPVDAFDRDQKVKLASGTLLTVDNQIDTTTGTVKLKAQFANDDAKLFPNQFVNVRMLIDTRTEVTTVPSAALQRGARGLFVYVVKEDRTVTLRDVKTGPAENDATVIESGIEPGELVVTDGMDRLREGAKVELPSK 1002
            PVVA  A K DV++++ GLGTVTPL+TVTVRSRV+GQLMRV F+EGQ+V++G+LLAEIDPRPF+    Q +GQ+ RDQALLANAR+DL+RYR LLAQDSIAKQ VD+QEALV                     TYSR+TAPI GR GLR +D GNIVR  DA G+VVITQ  P+ V++T+ QD L  V+KR+QSG+++ V+A+DR+QK +LASG L  VDN +DTTTGTVKLKA FANDD  LFPNQFVNVRM ++T +  T +PSAA+QRG +G+FVYVVK+D TVT R VK GP +     I +GI+PGE VV DG+DRLREGA+V+L  +
Sbjct:   79 PVVAANARKGDVDIFINGLGTVTPLRTVTVRSRVEGQLMRVHFQEGQVVKDGQLLAEIDPRPFEVQFKQADGQLVRDQALLANARLDLERYRTLLAQDSIAKQQVDSQEALVRQYEGVVRSDQSQVDSARLQLTYSRITAPIAGRTGLRLIDPGNIVRGGDATGIVVITQTTPIAVLFTVPQDALPAVIKRVQSGDKLQVEAWDREQKARLASGALTAVDNLVDTTTGTVKLKASFANDDGALFPNQFVNVRMKLETASGQTVIPSAAIQRGGQGMFVYVVKDDDTVTARPVKLGPIDGQRVAIAAGIKPGERVVVDGIDRLREGARVQLTKR 411          
BLAST of mRNA_P-wetherbeei_contig20083.1.1 vs. uniprot
Match: UPI001BBE4699 (MdtA/MuxA family multidrug efflux RND transporter periplasmic adaptor subunit n=1 Tax=Sulfuricella sp. TaxID=2099377 RepID=UPI001BBE4699)

HSP 1 Score: 398 bits (1022), Expect = 3.250e-134
Identity = 203/324 (62.65%), Postives = 247/324 (76.23%), Query Frame = 1
Query:    1 MPVVAVPAAKKDVNVYLTGLGTVTPLKTVTVRSRVDGQLMRVLFREGQLVREGELLAEIDPRPFQAALMQYEGQMARDQALLANARIDLDRYRVLLAQDSIAKQLVDTQEALVXXXXXXXXXXXXXXXXXXXXXTYSRVTAPIPGRLGLRQVDMGNIVRSSDANGLVVITQLQPVTVIYTIAQDNLQVVLKRMQSGERVPVDAFDRDQKVKLASGTLLTVDNQIDTTTGTVKLKAQFANDDAKLFPNQFVNVRMLIDTRTEVTTVPSAALQRGARGLFVYVVKEDRTVTLRDVKTGPAENDATVIESGIEPGELVVTDGMDRLR 972
            +PVVA P  K D+ VYL GLGTV P   VTVR+RVDGQLM+V F+EGQ+V+ G LLAEIDPRPFQ  L Q EGQMARDQALL NARID +RYR L+AQDSIA+Q +DTQEALV                      Y+R+TAP  GR+GLRQVD GNIVR+SDANGLVVI QLQP TV++T+ +D+L  ++KR+Q G  +PV+AFDR+QK+KLA+G LLT DNQIDT TGT++LKA F NDDA LFPNQFVN RML DTR +V   P+AA+QRG  G FVYVV++D+TVT+R VK GPA+ ++  IE G++PGE VV DG+D+LR
Sbjct:   55 IPVVAAPIGKGDIGVYLNGLGTVVPRNVVTVRARVDGQLMQVYFQEGQMVKAGTLLAEIDPRPFQVQLTQAEGQMARDQALLQNARIDAERYRTLVAQDSIARQQLDTQEALVRQYEGAVKTDQGQIDNAKLQLVYTRITAPFSGRVGLRQVDPGNIVRASDANGLVVIAQLQPATVVFTLPEDSLPKLMKRIQGGAALPVEAFDREQKIKLAAGKLLTTDNQIDTATGTIRLKAVFPNDDAALFPNQFVNARMLSDTRKDVVLAPTAAIQRGVPGTFVYVVQQDKTVTVRPVKLGPADGESIAIEEGLQPGEQVVIDGVDKLR 378          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20083.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A536Y253_9PROT4.180e-15374.85MdtA/MuxA family multidrug efflux RND transporter ... [more]
A0A536YP86_9PROT5.970e-15268.22MdtA/MuxA family multidrug efflux RND transporter ... [more]
A0A536SPX7_9PROT4.170e-14871.60MdtA/MuxA family multidrug efflux RND transporter ... [more]
UPI000550EDE42.700e-13768.39MdtA/MuxA family multidrug efflux RND transporter ... [more]
A0A5F0LAN9_9BURK6.130e-13768.39MdtA/MuxA family multidrug efflux RND transporter ... [more]
A0A536ZKP7_9PROT1.070e-13663.69MdtA/MuxA family multidrug efflux RND transporter ... [more]
J3DB21_9BURK1.090e-13563.22RND family efflux transporter, MFP subunit n=3 Tax... [more]
A0A536TEE1_9PROT9.350e-13563.14MdtA/MuxA family multidrug efflux RND transporter ... [more]
A0A1F3ZTS7_9PROT2.120e-13461.56Biotin_lipoyl_2 domain-containing protein n=1 Tax=... [more]
UPI001BBE46993.250e-13462.65MdtA/MuxA family multidrug efflux RND transporter ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20083contigP-wetherbeei_contig20083:167..1243 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1144319.PMI16_02517
Preferred namemdtA
PFAMsBiotin_lipoyl_2,HlyD_3,HlyD_D23
Model size1077
Max annot lvl28216|Betaproteobacteria
KEGG koko:K07799
KEGG TC8.A.1
KEGG Pathwayko02020,map02020
KEGG ModuleM00648
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.78e-136
EggNOG OGsCOG0845@1|root,COG0845@2|Bacteria,1MW65@1224|Proteobacteria,2VHQP@28216|Betaproteobacteria,47236@75682|Oxalobacteraceae
DescriptionBelongs to the membrane fusion protein (MFP) (TC 8.A.1) family
Cds size1077
COG categoryM
BRITEko00000,ko00001,ko00002,ko02000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186190.2273085-CDS-P-wetherbeei_contig20083:166..12431683186190.2273085-CDS-P-wetherbeei_contig20083:166..1243Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20083 167..1243 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20083.1.1prot_P-wetherbeei_contig20083.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20083 167..1243 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20083.1.1

>prot_P-wetherbeei_contig20083.1.1 ID=prot_P-wetherbeei_contig20083.1.1|Name=mRNA_P-wetherbeei_contig20083.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=359bp
MPVVAVPAAKKDVNVYLTGLGTVTPLKTVTVRSRVDGQLMRVLFREGQLV
REGELLAEIDPRPFQAALMQYEGQMARDQALLANARIDLDRYRVLLAQDS
IAKQLVDTQEALVRQYEGTVKIDQGLVDNARLQLTYSRVTAPIPGRLGLR
QVDMGNIVRSSDANGLVVITQLQPVTVIYTIAQDNLQVVLKRMQSGERVP
VDAFDRDQKVKLASGTLLTVDNQIDTTTGTVKLKAQFANDDAKLFPNQFV
NVRMLIDTRTEVTTVPSAALQRGARGLFVYVVKEDRTVTLRDVKTGPAEN
DATVIESGIEPGELVVTDGMDRLREGAKVELPSKDAAASGKGGDGSRKKG
GGRRKGGDG
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mRNA from alignment at P-wetherbeei_contig20083:167..1243-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20083.1.1 ID=mRNA_P-wetherbeei_contig20083.1.1|Name=mRNA_P-wetherbeei_contig20083.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1077bp|location=Sequence derived from alignment at P-wetherbeei_contig20083:167..1243- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGGTCGTGGCAGTGCCGGCAGCGAAAAAAGACGTCAATGTCTACCT GACCGGGCTCGGCACCGTGACGCCGCTGAAGACCGTCACAGTCAGGAGCC GCGTCGATGGCCAGTTGATGCGCGTGCTGTTCCGCGAGGGGCAGCTGGTA CGCGAAGGCGAGTTGCTCGCGGAAATCGATCCGCGCCCGTTCCAGGCCGC GCTGATGCAGTACGAAGGACAGATGGCGCGCGACCAGGCGCTGCTCGCGA ATGCGCGCATCGATCTCGACCGCTATCGCGTGCTGCTCGCGCAGGATTCG ATCGCCAAGCAGCTGGTCGATACGCAGGAGGCGCTGGTGCGCCAGTACGA AGGCACGGTGAAAATCGACCAGGGGCTGGTCGATAACGCGCGCCTGCAAC TCACATACTCGCGCGTGACGGCGCCGATACCGGGGCGGCTGGGCCTGCGC CAGGTCGATATGGGCAACATCGTGCGCTCGAGTGACGCCAACGGTCTGGT CGTCATCACGCAACTGCAGCCGGTCACGGTGATTTACACGATCGCGCAGG ACAATCTGCAGGTCGTATTGAAGCGCATGCAATCGGGCGAGCGCGTGCCG GTCGATGCTTTCGACCGCGACCAAAAGGTAAAACTCGCGAGCGGCACGCT GCTGACCGTGGACAACCAGATCGACACCACTACCGGCACCGTCAAGCTGA AAGCGCAGTTCGCCAACGACGACGCGAAACTGTTCCCTAACCAGTTCGTC AACGTGCGCATGCTGATCGACACGCGCACCGAAGTGACTACCGTGCCGAG CGCGGCGCTGCAGCGCGGCGCGCGCGGGCTGTTTGTTTACGTGGTGAAGG AAGACCGCACGGTCACCTTGCGCGACGTCAAAACCGGGCCGGCGGAAAAC GATGCGACCGTGATCGAGTCCGGCATCGAACCGGGTGAACTCGTCGTCAC CGACGGCATGGACCGCCTGCGCGAAGGCGCCAAAGTTGAACTGCCGTCGA AAGACGCCGCAGCGTCGGGCAAGGGCGGCGACGGCTCGCGTAAAAAAGGC GGCGGACGCCGCAAGGGTGGTGACGGC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20083:167..1243-

>mRNA_P-wetherbeei_contig20083.1.1 ID=mRNA_P-wetherbeei_contig20083.1.1|Name=mRNA_P-wetherbeei_contig20083.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1077bp|location=Sequence derived from alignment at P-wetherbeei_contig20083:167..1243- (Phaeothamnion wetherbeei SAG_119_79)
ATGCCGGTCGTGGCAGTGCCGGCAGCGAAAAAAGACGTCAATGTCTACCT
GACCGGGCTCGGCACCGTGACGCCGCTGAAGACCGTCACAGTCAGGAGCC
GCGTCGATGGCCAGTTGATGCGCGTGCTGTTCCGCGAGGGGCAGCTGGTA
CGCGAAGGCGAGTTGCTCGCGGAAATCGATCCGCGCCCGTTCCAGGCCGC
GCTGATGCAGTACGAAGGACAGATGGCGCGCGACCAGGCGCTGCTCGCGA
ATGCGCGCATCGATCTCGACCGCTATCGCGTGCTGCTCGCGCAGGATTCG
ATCGCCAAGCAGCTGGTCGATACGCAGGAGGCGCTGGTGCGCCAGTACGA
AGGCACGGTGAAAATCGACCAGGGGCTGGTCGATAACGCGCGCCTGCAAC
TCACATACTCGCGCGTGACGGCGCCGATACCGGGGCGGCTGGGCCTGCGC
CAGGTCGATATGGGCAACATCGTGCGCTCGAGTGACGCCAACGGTCTGGT
CGTCATCACGCAACTGCAGCCGGTCACGGTGATTTACACGATCGCGCAGG
ACAATCTGCAGGTCGTATTGAAGCGCATGCAATCGGGCGAGCGCGTGCCG
GTCGATGCTTTCGACCGCGACCAAAAGGTAAAACTCGCGAGCGGCACGCT
GCTGACCGTGGACAACCAGATCGACACCACTACCGGCACCGTCAAGCTGA
AAGCGCAGTTCGCCAACGACGACGCGAAACTGTTCCCTAACCAGTTCGTC
AACGTGCGCATGCTGATCGACACGCGCACCGAAGTGACTACCGTGCCGAG
CGCGGCGCTGCAGCGCGGCGCGCGCGGGCTGTTTGTTTACGTGGTGAAGG
AAGACCGCACGGTCACCTTGCGCGACGTCAAAACCGGGCCGGCGGAAAAC
GATGCGACCGTGATCGAGTCCGGCATCGAACCGGGTGAACTCGTCGTCAC
CGACGGCATGGACCGCCTGCGCGAAGGCGCCAAAGTTGAACTGCCGTCGA
AAGACGCCGCAGCGTCGGGCAAGGGCGGCGACGGCTCGCGTAAAAAAGGC
GGCGGACGCCGCAAGGGTGGTGACGGC
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