mRNA_P-wetherbeei_contig2006.5.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig2006.5.1 vs. uniprot
Match: D7G378_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G378_ECTSI) HSP 1 Score: 262 bits (669), Expect = 1.080e-81 Identity = 141/255 (55.29%), Postives = 180/255 (70.59%), Query Frame = 1
Query: 1 DVLDITHLAVSLMVENKALLNRMFLECGQKELIFIERSGFYFGFLFGLFQTLAWWFYPEGWVLPVG-----ILTNWLALKIIFQPVEPVRVCGLFTAQGLFLLRQTEVSAAFAKINAAEVLNSEHLWQA---RPLSHVFEEKCRLHVNVFLDAMAGPLRPLVVAYLGKEEFHEVKDHIAAEIPSSCLSCQARYANKYTDQSLDLETTLRVAMQNLSSKEFEGVLHPVFEEDELKLIVVGGALGAAVGVLQLAFMF 741
DVLD+ H+ ++ +V+NKAL+NR+F+E G KEL+FIERSG FGFLFG QT W+FY E WVLPVG LTN+LALK+IF+PV VCGL QGLFL RQTEVSA FA+I + E+L S+ +W+A P F + C+ H + F+D MAG +RPLV +G+ EF +KD IA ++ + L R+ + YT ++LD+ T+RVAMQ LS EFEGVLHPVFEEDE KLI+VG ALGAAVGV QL +F
Sbjct: 244 DVLDVHHMVITNLVKNKALMNRVFMEVGAKELVFIERSGLLFGFLFGCLQTCLWYFYQENWVLPVGGLVVGWLTNYLALKMIFRPVNERIVCGL-KLQGLFLKRQTEVSAHFAEITSNEILTSQAMWEAILTGPKRDSFNDMCKRHTHNFVDDMAGSMRPLVQHMIGENEFVGLKDEIAQQMIEN-LPMAIRFGHTYTTKALDMSNTIRVAMQGLSPAEFEGVLHPVFEEDEWKLILVGAALGAAVGVFQLFVLF 496
BLAST of mRNA_P-wetherbeei_contig2006.5.1 vs. uniprot
Match: A0A7S2SNZ7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SNZ7_9STRA) HSP 1 Score: 255 bits (652), Expect = 5.120e-80 Identity = 135/252 (53.57%), Postives = 174/252 (69.05%), Query Frame = 1
Query: 10 DITHLAVSLMVENKALLNRMFLECGQKELIFIERSGFYFGFLFGLFQTLAWWFYPEGWVLP-----VGILTNWLALKIIFQPVEPVRVCGLFTAQGLFLLRQTEVSAAFAKINAAEVLNSEHLWQA---RPLSHVFEEKCRLHVNVFLDAMAGPLRPLVVAYLGKEEFHEVKDHIAAEIPSSCLSCQARYANKYTDQSLDLETTLRVAMQNLSSKEFEGVLHPVFEEDELKLIVVGGALGAAVGVLQLAFMF 741
D+ H+ V+ MV+NK LLN++F++CG+KEL FIERSGFYFGFLFG+ Q W+FY WVLP VG TNWLALK+IFQP+EPV++ G FT GLFL RQ EVS FAKIN+ E+L + +WQ+ P F+ HV+ F+D M G L+ ++ G+ F +KD IA +I L + + YT+++LD+E T+R AMQ+LSSKEFEGVLHPVFEEDELKLI+VG LG AVGV QL +F
Sbjct: 172 DLKHMVVTNMVKNKGLLNKVFMDCGEKELKFIERSGFYFGFLFGVGQAFWWYFYQASWVLPACGFIVGYATNWLALKVIFQPIEPVKL-GCFTLHGLFLRRQKEVSVLFAKINSTEILTPQAMWQSILHGPKKDAFQAAMVKHVHKFVDDMVGKLKFILDGLWGEVHFLAMKDEIARKIIEQ-LPAHIQLSYDYTEEALDMERTIREAMQSLSSKEFEGVLHPVFEEDELKLIIVGAMLGLAVGVFQLLVLF 421
BLAST of mRNA_P-wetherbeei_contig2006.5.1 vs. uniprot
Match: A0A7R9WC17_9STRA (Hypothetical protein n=2 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WC17_9STRA) HSP 1 Score: 239 bits (609), Expect = 2.550e-75 Identity = 127/255 (49.80%), Postives = 167/255 (65.49%), Query Frame = 1
Query: 1 DVLDITHLAVSLMVENKALLNRMFLECGQKELIFIERSGFYFGFLFGLFQTLAWWFYPEGWVLPV-----GILTNWLALKIIFQPVEPVRVCGLFTAQGLFLLRQTEVSAAFAKINAAEVLNSEHLWQA---RPLSHVFEEKCRLHVNVFLDAMAGPLRPLVVAYLGKEEFHEVKDHIAAEIPSSCLSCQARYANKYTDQSLDLETTLRVAMQNLSSKEFEGVLHPVFEEDELKLIVVGGALGAAVGVLQLAFMF 741
DVLDI + V+ V+NK L+N++F ECG KE FI RSGFYFGFLFG Q + W+FY W+LPV G TNWLALK+IF+P+EP + C FT G+FL RQ EVS FA++N E+L+++ +W A PLS F R H VF + M G L+P+ +A +G +EF +K+ IA +I L + +Y ++LD+E T+R MQ+LS EFEGVLHP FEEDE+ LI VGG LGA VGV+QL +F
Sbjct: 23 DVLDIKQMTVAACVKNKPLVNKIFKECGDKEFDFIRRSGFYFGFLFGCLQMVIWFFYNGSWILPVFGFLVGWTTNWLALKVIFRPLEPKKFC-CFTIHGIFLKRQMEVSETFARVNCVEILHTKAIWDAILTGPLSRNFFAMLRAHTIVFTENMVGGLKPVAIAAMGAQEFARMKEDIATKIAQK-LPTIIDQSYEYMTEALDMENTIRQKMQDLSYSEFEGVLHPAFEEDEIILIFVGGVLGALVGVIQLFALF 275
BLAST of mRNA_P-wetherbeei_contig2006.5.1 vs. uniprot
Match: A0A7S2EBD3_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EBD3_TRICV) HSP 1 Score: 239 bits (611), Expect = 7.010e-74 Identity = 130/255 (50.98%), Postives = 168/255 (65.88%), Query Frame = 1
Query: 1 DVLDITHLAVSLMVENKALLNRMFLECGQKELIFIERSGFYFGFLFGLFQTLAWWFYPEGWVLPV-----GILTNWLALKIIFQPVEPVRVCGLFTAQGLFLLRQTEVSAAFAKINAAEVLNSEHLWQA---RPLSHVFEEKCRLHVNVFLDAMAGPLRPLVVAYLGKEEFHEVKDHIAAEIPSSCLSCQARYANKYTDQSLDLETTLRVAMQNLSSKEFEGVLHPVFEEDELKLIVVGGALGAAVGVLQLAFMF 741
DVLDI ++ VS VENK L+N++F ECG KE FI+RSGFYFGFLFG Q + W+FY W+LPV G TN+LALK+IF+P+EP +V G FT QG+FL RQ EVS FA++N E+L++ +W A PLS F R H VF + M G L+P+ VA +G +F +K+ IAA+I L + +Y ++LD+E T+R MQ LS EFEGVLHP FEEDE+ LI VGG LG VGV+QL +F
Sbjct: 157 DVLDIKNMTVSACVENKPLVNKIFQECGDKEFAFIKRSGFYFGFLFGCVQMVIWFFYNASWILPVFGFLVGWCTNYLALKVIFRPLEPTKV-GPFTVQGIFLKRQREVSETFARVNCVEILHTRAIWDAILTGPLSPNFYAMLRAHSIVFTEDMVGKLKPVAVAAMGAAKFSRMKEDIAAKIAER-LPTIIDQSYEYMTEALDMERTIREKMQELSPAEFEGVLHPAFEEDEITLIFVGGVLGCIVGVIQLFALF 409
BLAST of mRNA_P-wetherbeei_contig2006.5.1 vs. uniprot
Match: B8C8A7_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C8A7_THAPS) HSP 1 Score: 231 bits (590), Expect = 8.200e-71 Identity = 120/255 (47.06%), Postives = 166/255 (65.10%), Query Frame = 1
Query: 1 DVLDITHLAVSLMVENKALLNRMFLECGQKELIFIERSGFYFGFLFGLFQTLAWWFYPEGWVLP-----VGILTNWLALKIIFQPVEPVRVCGLFTAQGLFLLRQTEVSAAFAKINAAEVLNSEHLWQA---RPLSHVFEEKCRLHVNVFLDAMAGPLRPLVVAYLGKEEFHEVKDHIAAEIPSSCLSCQARYANKYTDQSLDLETTLRVAMQNLSSKEFEGVLHPVFEEDELKLIVVGGALGAAVGVLQLAFMF 741
D+LDI + V+ VENK L+N++F ECG+KE IFI RSGFYFGFLFGL Q ++ Y WVLP VG TNW+ALK+IF+P+ P ++ G FT G+FL RQ EVS FA++N E+L+++ +W+ PLS F R H VF + + G ++PL V +G ++F E+K+ IA +I + L ++ +YT ++LD+E T+R MQ LS EFEGVLHP FEEDE+ LI VGG LG G +Q+ +
Sbjct: 161 DILDIKQMTVAACVENKVLVNKIFQECGEKEFIFIRRSGFYFGFLFGLLQMGVFFIYDASWVLPFFGFLVGWATNWVALKVIFRPLNPQKI-GPFTIHGIFLKRQKEVSETFARVNCVEILHTKAIWETILNGPLSSNFYAMLRAHSIVFTEKLVGGMKPLAVTAMGSQQFSEMKEEIAKKIAEN-LPIIMPHSYQYTTEALDMENTIRERMQKLSYPEFEGVLHPAFEEDEILLIFVGGVLGLIAGAIQVVIFY 413
BLAST of mRNA_P-wetherbeei_contig2006.5.1 vs. uniprot
Match: A0A7R9WPM9_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WPM9_9STRA) HSP 1 Score: 231 bits (588), Expect = 1.640e-70 Identity = 124/256 (48.44%), Postives = 169/256 (66.02%), Query Frame = 1
Query: 1 DVLDITHLAVSLMVENKALLNRMFLECGQKELIFIERSGFYFGFLFGLFQTLAWWFYPEGWVLPV-----GILTNWLALKIIFQPVEPVRVCGLFTAQGLFLLRQTEVSAAFAKINAAEVLNSEHLWQA---RPLSHVFEEKCRLHVNVFLDAMAGPLRPLVVAYLGKEEFHEVKDHIAAEIPSSCLSC-QARYANKYTDQSLDLETTLRVAMQNLSSKEFEGVLHPVFEEDELKLIVVGGALGAAVGVLQLAFMF 741
DV+DI L V+ VENK LL ++F ECG KE IFI RSGFYFGFLFG+ Q W FY GW+LPV G +TN++ALK+IFQP+EP ++ +T G+FL RQ EVS FA++ E+L+ + +W A LS F R H VF D M ++PL +A +G ++F+++K+ IA ++ A Y +YT ++LD+E T+RV M LSS +FEGVLHP F+EDE++LI +GG LGAAVGV+QL +F
Sbjct: 160 DVVDIKELCVNACVENKHLLVKIFQECGDKEFIFIRRSGFYFGFLFGVLQMTVWLFYDAGWILPVAGFLVGWVTNYIALKVIFQPLEPKQIL-CWTLHGIFLKRQVEVSETFARVICTEILHVKAMWDAIFTGRLSKNFFAMLRAHTLVFTDKMIAEIKPLAIAAMGADKFNQMKESIAQKVLEKIPDVIDASY--EYTQEALDMEATIRVKMAQLSSSDFEGVLHPAFQEDEIQLIALGGVLGAAVGVIQLFTLF 412
BLAST of mRNA_P-wetherbeei_contig2006.5.1 vs. uniprot
Match: A0A7S2LQF0_9STRA (Hypothetical protein n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LQF0_9STRA) HSP 1 Score: 223 bits (567), Expect = 9.390e-68 Identity = 115/255 (45.10%), Postives = 164/255 (64.31%), Query Frame = 1
Query: 1 DVLDITHLAVSLMVENKALLNRMFLECGQKELIFIERSGFYFGFLFGLFQTLAWWFYPEGWVLP-----VGILTNWLALKIIFQPVEPVRVCGLFTAQGLFLLRQTEVSAAFAKINAAEVLNSEHLWQ---ARPLSHVFEEKCRLHVNVFLDAMAGPLRPLVVAYLGKEEFHEVKDHIAAEIPSSCLSCQARYANKYTDQSLDLETTLRVAMQNLSSKEFEGVLHPVFEEDELKLIVVGGALGAAVGVLQLAFMF 741
DVLDI + V+ V K L+N++F ECG KE FI RSGFYFGFLFGL Q ++ Y WVLP VG TNW+ALK+IF+P+ P+++ G F+ G+FL RQ EVS FA++N E+L+++ +W+ + P S F R H VF + + G ++P+ +A +G ++F E+K+ IA +I S ++ +YT ++LD+E T+R MQ L EFEGVLHP FEEDE+ LI+VGG LG G +Q+ M+
Sbjct: 128 DVLDIKQMTVAACVREKRLVNKIFQECGDKEFTFIRRSGFYFGFLFGLIQMGVFFVYDASWVLPFFGFLVGWATNWVALKVIFRPLNPIKI-GCFSLHGIFLKRQMEVSETFARVNCVEILHTKAIWEEILSGPKSKNFFAMLRAHSIVFTERLVGGMKPITIAAMGSQQFSEMKEEIAQKIADKLPSVMP-HSYEYTTEALDMENTIRERMQKLPYPEFEGVLHPAFEEDEILLILVGGLLGLVAGGIQVVAMY 380
BLAST of mRNA_P-wetherbeei_contig2006.5.1 vs. uniprot
Match: K0RT03_THAOC (Uncharacterized protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RT03_THAOC) HSP 1 Score: 230 bits (587), Expect = 1.730e-67 Identity = 123/255 (48.24%), Postives = 165/255 (64.71%), Query Frame = 1
Query: 1 DVLDITHLAVSLMVENKALLNRMFLECGQKELIFIERSGFYFGFLFGLFQTLAWWFYPEGWVLP-----VGILTNWLALKIIFQPVEPVRVCGLFTAQGLFLLRQTEVSAAFAKINAAEVLNSEHLWQA---RPLSHVFEEKCRLHVNVFLDAMAGPLRPLVVAYLGKEEFHEVKDHIAAEIPSSCLSCQARYANKYTDQSLDLETTLRVAMQNLSSKEFEGVLHPVFEEDELKLIVVGGALGAAVGVLQLAFMF 741
D+LDI + V+ V KAL+N++F ECG KE FI SGFYFG LFGL Q ++ Y W+LP VG TNWLALK+IF+P+EP ++ G FT G+FL RQTEVS FA++N E+L+++ +W+ PLS F R H VF + + G L+PL V +G ++F E+K+ IA+EI L Y+ +YT +LD+ETT+R MQ LS +EFEGVLHP FEEDE+ LI+VGG LG G LQ+ +
Sbjct: 466 DILDIKQMTVAACVREKALVNKIFQECGDKEFTFIRNSGFYFGGLFGLVQMGVFFVYDASWILPLFGFLVGWATNWLALKVIFRPLEPRKI-GPFTIHGIFLKRQTEVSETFARVNCVEILHTKAIWETILGGPLSPNFFAMLRAHSIVFTEKLVGGLKPLAVTAMGSDKFAEMKEEIASEIAER-LPAIMPYSYQYTTDALDMETTIRERMQKLSYEEFEGVLHPAFEEDEILLILVGGILGLLAGALQVLIFY 718
BLAST of mRNA_P-wetherbeei_contig2006.5.1 vs. uniprot
Match: A0A7S4K4B8_9STRA (Hypothetical protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4K4B8_9STRA) HSP 1 Score: 223 bits (569), Expect = 4.050e-67 Identity = 119/252 (47.22%), Postives = 160/252 (63.49%), Query Frame = 1
Query: 10 DITHLAVSLMVENKALLNRMFLECGQKELIFIERSGFYFGFLFGLFQTLAWWFYPEGWVLPV-----GILTNWLALKIIFQPVEPVRVCGLFTAQGLFLLRQTEVSAAFAKINAAEVLNSEHLWQA---RPLSHVFEEKCRLHVNVFLDAMAGPLRPLVVAYLGKEEFHEVKDHIAAEIPSSCLSCQARYANKYTDQSLDLETTLRVAMQNLSSKEFEGVLHPVFEEDELKLIVVGGALGAAVGVLQLAFMF 741
DI + V+ V+NK L+N++F ECG KE FI RSGFYFGF+FG Q + W+FY W+LPV G TNWLALK+IF+P+EP + G T G+FL RQ EVS FA++N E+L+++ +W A PLS F R H VF + M G L+P+ +A +G + F +K+ IA +I L + +Y ++LD+E T+R MQ LS EFEGVLHP FEEDE+ LI VGG LG VG++QL +F
Sbjct: 205 DIKQMTVAACVKNKPLVNKIFQECGDKEFNFIRRSGFYFGFMFGCCQMVIWFFYDGSWILPVFGFLVGWTTNWLALKVIFRPLEPKKF-GCITVHGIFLKRQMEVSETFARVNCVEILHTKAIWDAILTGPLSMNFYAMLRAHTIVFTENMIGGLKPVAIAAMGAKTFARMKEDIATKIAQK-LPTIIDQSYEYMTEALDMENTIREKMQALSFSEFEGVLHPAFEEDEIILIFVGGVLGCLVGIIQLFALF 454
BLAST of mRNA_P-wetherbeei_contig2006.5.1 vs. uniprot
Match: A0A1Z5KAV6_FISSO (Uncharacterized protein n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5KAV6_FISSO) HSP 1 Score: 221 bits (563), Expect = 9.110e-67 Identity = 116/255 (45.49%), Postives = 168/255 (65.88%), Query Frame = 1
Query: 1 DVLDITHLAVSLMVENKALLNRMFLECGQKELIFIERSGFYFGFLFGLFQTLAWWFYPEGWVLP-----VGILTNWLALKIIFQPVEPVRVCGLFTAQGLFLLRQTEVSAAFAKINAAEVLNSEHLWQA---RPLSHVFEEKCRLHVNVFLDAMAGPLRPLVVAYLGKEEFHEVKDHIAAEIPSSCLSCQARYANKYTDQSLDLETTLRVAMQNLSSKEFEGVLHPVFEEDELKLIVVGGALGAAVGVLQLAFMF 741
DV++I HLAV+ VENK L+ ++F ECG+KE +FI +SGFYFGF FG+ Q W+FY W+LP VG TN+LALK IF+P+ P + G +T G+FL RQ EVS FA++ E+L+ + +W A PLS F R H VF++ + ++PL +A +G + F +K+ IA ++ + L + +YT ++L++E T+R+ MQ L+ EFEGVLHP FEEDE++LI++GG LGA VGV+QL +F
Sbjct: 158 DVVNIKHLAVTACVENKDLIVKVFQECGEKEFVFIRQSGFYFGFAFGVIQMGVWFFYDASWILPTAGFIVGWFTNYLALKCIFRPLHPRKFMG-YTIHGIFLQRQAEVSEVFARVIMTEILHVKAIWDAIFMGPLSVNFNAMLRAHTLVFVEKLVAEIKPLAIAAMGADRFARMKEDIAQKVIEN-LPTIIDNSYEYTQEALNMEETVRIRMQKLTPAEFEGVLHPAFEEDEIQLILLGGILGAIVGVIQLYAVF 410 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2006.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig2006.5.1 >prot_P-wetherbeei_contig2006.5.1 ID=prot_P-wetherbeei_contig2006.5.1|Name=mRNA_P-wetherbeei_contig2006.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=248bp DVLDITHLAVSLMVENKALLNRMFLECGQKELIFIERSGFYFGFLFGLFQback to top mRNA from alignment at P-wetherbeei_contig2006:4088..6310- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig2006.5.1 ID=mRNA_P-wetherbeei_contig2006.5.1|Name=mRNA_P-wetherbeei_contig2006.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2223bp|location=Sequence derived from alignment at P-wetherbeei_contig2006:4088..6310- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig2006:4088..6310- >mRNA_P-wetherbeei_contig2006.5.1 ID=mRNA_P-wetherbeei_contig2006.5.1|Name=mRNA_P-wetherbeei_contig2006.5.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=744bp|location=Sequence derived from alignment at P-wetherbeei_contig2006:4088..6310- (Phaeothamnion wetherbeei SAG_119_79)back to top |