mRNA_P-wetherbeei_contig20054.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20054.1.1 vs. uniprot
Match: UPI00190887F4 (putative photosynthetic complex assembly protein PuhE n=1 Tax=Thiohalocapsa halophila TaxID=69359 RepID=UPI00190887F4) HSP 1 Score: 256 bits (653), Expect = 1.750e-82 Identity = 118/197 (59.90%), Postives = 150/197 (76.14%), Query Frame = 1
Query: 1 MSNIGLPLLYALLLWWFSTGVILYLDSLPRRTFRWSLAGASVLTVAALYALVRSSEMVSAVGAYIAFTAGVLVWGWLEMSYFMGLITGPWQSPCPPSVHGWRRFVLAIRTSLYHECAIVLTGGMMLWFTREQPNALAAWTFVVLWLMRWSSKLNVFLGVPNLNEDFLPEQLSYLKSFMPHRPMNLLFPVSITAATVV 591
M + GL + YAL LWWFSTGVILYLD P T+ WSLAGA++ VAA LV S ++V+ +GAY FTAGV++WGW+EMSYFMG ITGP +SPCP GW+RF LA+ TS+YHE IV +M+W T N + WTFV+LWLMRWS+KLN+FLGVPNLNED+LPE++ +L +++ RPMNLLFPVS++ ATV+
Sbjct: 1 MLSYGLAVAYALFLWWFSTGVILYLDKRPEHTYPWSLAGATLALVAAFGVLVWSRDLVTVLGAYAGFTAGVVIWGWMEMSYFMGFITGPRKSPCPEGCRGWQRFRLALSTSIYHELVIVAAASLMIWLTWGAVNTVGTWTFVILWLMRWSAKLNLFLGVPNLNEDWLPERIRFLTTYLAKRPMNLLFPVSVSVATVI 197
BLAST of mRNA_P-wetherbeei_contig20054.1.1 vs. uniprot
Match: UPI001908EED8 (putative photosynthetic complex assembly protein PuhE n=1 Tax=Thiocystis violacea TaxID=13725 RepID=UPI001908EED8) HSP 1 Score: 255 bits (652), Expect = 2.190e-82 Identity = 120/197 (60.91%), Postives = 153/197 (77.66%), Query Frame = 1
Query: 1 MSNIGLPLLYALLLWWFSTGVILYLDSLPRRTFRWSLAGASVLTVAALYALVRSSEMVSAVGAYIAFTAGVLVWGWLEMSYFMGLITGPWQSPCPPSVHGWRRFVLAIRTSLYHECAIVLTGGMMLWFTREQPNALAAWTFVVLWLMRWSSKLNVFLGVPNLNEDFLPEQLSYLKSFMPHRPMNLLFPVSITAATVV 591
MS+ G P+LYAL LWWFSTGV+LYLD+LP RTFRW+L G +++ A++ALV SS S + Y+AF+AGV+VWG LEMSYF G +TGP +PCPPS GW+RF LAI TSLYHE I+ T ++ + ++PN + WTFVVLWLMRWS+KLN+FLG PNLNE++LPE L YLK++M R MNLLFPVS+T AT++
Sbjct: 1 MSDFGFPILYALGLWWFSTGVVLYLDNLPGRTFRWTLLGGAIVLAVAVFALVVSSASTSVLAIYVAFSAGVVVWGVLEMSYFTGFVTGPRNTPCPPSCSGWKRFGLAILTSLYHELLIIATVLFLVLISWDEPNQVGTWTFVVLWLMRWSAKLNLFLGAPNLNEEWLPEHLRYLKTYMSKRGMNLLFPVSVTLATII 197
BLAST of mRNA_P-wetherbeei_contig20054.1.1 vs. uniprot
Match: U3GL03_9GAMM (Putative photosynthetic complex assembly protein 2 n=1 Tax=Thioflavicoccus mobilis 8321 TaxID=765912 RepID=U3GL03_9GAMM) HSP 1 Score: 254 bits (649), Expect = 5.000e-82 Identity = 121/197 (61.42%), Postives = 149/197 (75.63%), Query Frame = 1
Query: 1 MSNIGLPLLYALLLWWFSTGVILYLDSLPRRTFRWSLAGASVLTVAALYALVRSSEMVSAVGAYIAFTAGVLVWGWLEMSYFMGLITGPWQSPCPPSVHGWRRFVLAIRTSLYHECAIVLTGGMMLWFTREQPNALAAWTFVVLWLMRWSSKLNVFLGVPNLNEDFLPEQLSYLKSFMPHRPMNLLFPVSITAATVV 591
M+ GLP+LYALL+WW STGV+LYL+ LPRRT+RWSL GASVL V AL L+ S+ AY+AFT VL+WGWLEMSYFMGLITGP + PCP W+RFVLA++ SLYHE +V G+++W QPN + WTF+VLW MRWS+KLN+F GVPNLNED+LPE L L SF+ +P+NLLFP+S+T ATVV
Sbjct: 1 MALYGLPILYALLVWWLSTGVVLYLNRLPRRTYRWSLLGASVLLVFALSELLGHSQSSEVRNAYLAFTYAVLIWGWLEMSYFMGLITGPHKHPCPVGSSNWQRFVLAVQVSLYHELVVVALAGLIVWLAWGQPNQVGTWTFLVLWWMRWSAKLNLFFGVPNLNEDWLPEHLRLLVSFIKKKPINLLFPLSVTVATVV 197
BLAST of mRNA_P-wetherbeei_contig20054.1.1 vs. uniprot
Match: D3RPF3_ALLVD (Photosynthetic complex assembly protein 2 n=4 Tax=Allochromatium TaxID=85072 RepID=D3RPF3_ALLVD) HSP 1 Score: 253 bits (646), Expect = 7.520e-82 Identity = 123/197 (62.44%), Postives = 152/197 (77.16%), Query Frame = 1
Query: 1 MSNIGLPLLYALLLWWFSTGVILYLDSLPRRTFRWSLAGASVLTVAALYALVRSSEMVSAVGAYIAFTAGVLVWGWLEMSYFMGLITGPWQSPCPPSVHGWRRFVLAIRTSLYHECAIVLTGGMMLWFTREQPNALAAWTFVVLWLMRWSSKLNVFLGVPNLNEDFLPEQLSYLKSFMPHRPMNLLFPVSITAATVV 591
M++ G PLL+AL LWWFSTGV+LYLD+LP RTFRW+L G SV+ A++ L+ SS S GAY+AFTAGV++WG +EMSYF GLITGP ++ CPP WRRF LAI TSLYHE I+ T M+ T +PN + WTF+VLW+MRWS+KLN+FLGVPNLNED+LPE L YLK++M R MNLLFPVS+T AT+V
Sbjct: 1 MADYGFPLLFALGLWWFSTGVVLYLDNLPGRTFRWTLMGGSVVLAIAIFVLIVSSASTSVAGAYVAFTAGVVIWGVIEMSYFTGLITGPRKTACPPGCSKWRRFGLAILTSLYHELLILGTVLFMVLATWGEPNKVGTWTFIVLWIMRWSAKLNLFLGVPNLNEDWLPEPLRYLKTYMVKRAMNLLFPVSVTLATIV 197
BLAST of mRNA_P-wetherbeei_contig20054.1.1 vs. uniprot
Match: A0A6N8EEP1_9GAMM (DUF3623 family protein n=1 Tax=Allochromatium palmeri TaxID=231048 RepID=A0A6N8EEP1_9GAMM) HSP 1 Score: 253 bits (646), Expect = 7.770e-82 Identity = 122/197 (61.93%), Postives = 152/197 (77.16%), Query Frame = 1
Query: 1 MSNIGLPLLYALLLWWFSTGVILYLDSLPRRTFRWSLAGASVLTVAALYALVRSSEMVSAVGAYIAFTAGVLVWGWLEMSYFMGLITGPWQSPCPPSVHGWRRFVLAIRTSLYHECAIVLTGGMMLWFTREQPNALAAWTFVVLWLMRWSSKLNVFLGVPNLNEDFLPEQLSYLKSFMPHRPMNLLFPVSITAATVV 591
M++ G PLL+AL LWWFSTGV+LYLD+LP RTFRW+L G S++ A++ L+ SS S GAY+AFTAGV++WG +EMSYF G ITGP ++PCPP W+RF LAI TSLYHE I+ T M+ T +PN + WTFVVLW+MRWS+KLN+FLGVPNLNED+LPE L YLK++M R MNLLFPVS+T AT+V
Sbjct: 1 MADYGFPLLFALGLWWFSTGVVLYLDNLPGRTFRWTLMGGSIVLAIAIFTLIVSSASTSVFGAYVAFTAGVVIWGVIEMSYFTGFITGPRKTPCPPGCSEWKRFGLAILTSLYHELLILSTVLFMVLATWGEPNKVGTWTFVVLWVMRWSAKLNLFLGVPNLNEDWLPEPLRYLKTYMVKRGMNLLFPVSVTLATIV 197
BLAST of mRNA_P-wetherbeei_contig20054.1.1 vs. uniprot
Match: A0A1H3APE9_ALLWA (Putative photosynthetic complex assembly protein 2 n=1 Tax=Allochromatium warmingii TaxID=61595 RepID=A0A1H3APE9_ALLWA) HSP 1 Score: 251 bits (642), Expect = 3.240e-81 Identity = 121/197 (61.42%), Postives = 151/197 (76.65%), Query Frame = 1
Query: 1 MSNIGLPLLYALLLWWFSTGVILYLDSLPRRTFRWSLAGASVLTVAALYALVRSSEMVSAVGAYIAFTAGVLVWGWLEMSYFMGLITGPWQSPCPPSVHGWRRFVLAIRTSLYHECAIVLTGGMMLWFTREQPNALAAWTFVVLWLMRWSSKLNVFLGVPNLNEDFLPEQLSYLKSFMPHRPMNLLFPVSITAATVV 591
M++ G PLL+AL LWWFSTGV+LYLD+LP RTFRW+L G S++ A++ LV SS S GAY+AFT+GV++WG +EMSYF G ITGP ++PCPP W+RF LAI TSLYHE I+ T M T +PN + WTFVVLW+MRWS+KLN+FLGVPNLNED+LPE L YLK++M R MNLLFP+S+T AT+V
Sbjct: 1 MADYGFPLLFALGLWWFSTGVVLYLDNLPGRTFRWTLVGGSIVLAIAIFTLVISSAATSVFGAYVAFTSGVVIWGVIEMSYFTGFITGPRKTPCPPGCSKWQRFGLAILTSLYHELLILSTVLFMALITWGEPNKVGTWTFVVLWVMRWSAKLNLFLGVPNLNEDWLPEPLRYLKTYMVKRAMNLLFPLSVTLATIV 197
BLAST of mRNA_P-wetherbeei_contig20054.1.1 vs. uniprot
Match: A0A4R3MT03_9GAMM (Putative photosynthetic complex assembly protein 2 n=1 Tax=Thiobaca trueperi TaxID=127458 RepID=A0A4R3MT03_9GAMM) HSP 1 Score: 252 bits (644), Expect = 4.050e-81 Identity = 119/198 (60.10%), Postives = 152/198 (76.77%), Query Frame = 1
Query: 1 MSNIGLPLLYALLLWWFSTGVILYLDSLPRRTFRWSLAGASVLTVAALYALVRSSEMVSAVGAYIAFTAGVLVWGWLEMSYFMGLITGPWQSPCPPSVHGWRRFVLAIRTSLYHECAIVLTGGMMLWFTREQPNALAAWTFVVLWLMRWSSKLNVFLGVPNLNEDFLPEQLSYLKSFMPHRPMNLLFPVSITAATVVT 594
MS+ G P+LYAL LWWFSTGV+LYLD+LP RTFRW+L G + + A++ LV SS + AYIAF+ G+++WG LEMSYF G +TGP + PCPP+ WRRF LAI TSLYHE A++ TG ++ + +PN + WTFVVLWLMRWS+KLN+FLGVPNLNE++LPE L YLK++M R MNLLFP+S+T +TVVT
Sbjct: 1 MSDFGFPVLYALGLWWFSTGVVLYLDNLPGRTFRWTLLGGATVLALAIFGLVVSSASTDILSAYIAFSCGLVIWGVLEMSYFTGFLTGPRKIPCPPACSEWRRFGLAIMTSLYHELAVIATGLFLIMLSWGEPNQVGVWTFVVLWLMRWSAKLNLFLGVPNLNEEWLPEHLRYLKTYMVKRGMNLLFPISVTLSTVVT 198
BLAST of mRNA_P-wetherbeei_contig20054.1.1 vs. uniprot
Match: UPI0019056AF0 (putative photosynthetic complex assembly protein PuhE n=1 Tax=Thiocystis violacea TaxID=13725 RepID=UPI0019056AF0) HSP 1 Score: 251 bits (642), Expect = 7.640e-81 Identity = 120/197 (60.91%), Postives = 151/197 (76.65%), Query Frame = 1
Query: 1 MSNIGLPLLYALLLWWFSTGVILYLDSLPRRTFRWSLAGASVLTVAALYALVRSSEMVSAVGAYIAFTAGVLVWGWLEMSYFMGLITGPWQSPCPPSVHGWRRFVLAIRTSLYHECAIVLTGGMMLWFTREQPNALAAWTFVVLWLMRWSSKLNVFLGVPNLNEDFLPEQLSYLKSFMPHRPMNLLFPVSITAATVV 591
MS G P+LY L LWWFSTGV+LYLD+LP RTFRW+L G +V+ A++ LV SS ++ AY AF+ GV++WG LEMSYF G +TGP +SPCPP W+RF LAI TSLYHE AI+ T M+ + E+PN + WTF++LWLMRWS+KLN+FLGVPNLNE++LPE L YLK++M R MNLLFPVS+TAATV+
Sbjct: 1 MSEFGFPILYGLGLWWFSTGVVLYLDNLPGRTFRWTLLGGTVVLAIAIFGLVVSSASMTPFAAYAAFSCGVVIWGVLEMSYFTGFVTGPRKSPCPPVCSKWKRFGLAILTSLYHELAILSTVLFMVLISWEEPNQVGTWTFIILWLMRWSAKLNLFLGVPNLNEEWLPEHLRYLKTYMAKRSMNLLFPVSVTAATVI 197
BLAST of mRNA_P-wetherbeei_contig20054.1.1 vs. uniprot
Match: UPI0019055795 (putative photosynthetic complex assembly protein PuhE n=1 Tax=Rhabdochromatium marinum TaxID=48729 RepID=UPI0019055795) HSP 1 Score: 250 bits (639), Expect = 9.550e-81 Identity = 122/197 (61.93%), Postives = 152/197 (77.16%), Query Frame = 1
Query: 1 MSNIGLPLLYALLLWWFSTGVILYLDSLPRRTFRWSLAGASVLTVAALYALVRSSEMVSAVGAYIAFTAGVLVWGWLEMSYFMGLITGPWQSPCPPSVHGWRRFVLAIRTSLYHECAIVLTGGMMLWFTREQPNALAAWTFVVLWLMRWSSKLNVFLGVPNLNEDFLPEQLSYLKSFMPHRPMNLLFPVSITAATVV 591
M ++ L +LYAL LWWFSTGVIL+LD LP T+RWSL GAS++ +A++ +V +E V +GAY+ FT+GVL+WGWLEM+YFMG ITGP ++PCPP G RRF LAI+TSLYHE A+V G ++ T Q N AAWTF VLW MRWS+KLN+F GVPNLNED+LP L +L S++ RPMNLLFPVS+TAATVV
Sbjct: 1 MLSLALAILYALFLWWFSTGVILFLDRLPPSTYRWSLFGASLVGLASVTTVVGIAERVDMLGAYLGFTSGVLIWGWLEMTYFMGAITGPRKAPCPPGSRGRRRFWLAIQTSLYHELAVVAIGLLLFALTWGQENQAAAWTFAVLWWMRWSAKLNLFFGVPNLNEDWLPAHLRFLTSYLAKRPMNLLFPVSVTAATVV 197
BLAST of mRNA_P-wetherbeei_contig20054.1.1 vs. uniprot
Match: A0A6P1DPT1_9GAMM (DUF3623 domain-containing protein n=1 Tax=Thiorhodococcus mannitoliphagus TaxID=329406 RepID=A0A6P1DPT1_9GAMM) HSP 1 Score: 248 bits (633), Expect = 1.760e-79 Identity = 120/197 (60.91%), Postives = 150/197 (76.14%), Query Frame = 1
Query: 1 MSNIGLPLLYALLLWWFSTGVILYLDSLPRRTFRWSLAGASVLTVAALYALVRSSEMVSAVGAYIAFTAGVLVWGWLEMSYFMGLITGPWQSPCPPSVHGWRRFVLAIRTSLYHECAIVLTGGMMLWFTREQPNALAAWTFVVLWLMRWSSKLNVFLGVPNLNEDFLPEQLSYLKSFMPHRPMNLLFPVSITAATVV 591
MS+ G P+LYAL LWWFSTGV+LYLD+LP RTFRW+L G +++ A++ LV +S + Y+AF+ GV++WG LEMSYF G +TGP ++PCPP+ W+RF LAI TSLYHE AI+ T M T E+PN + WTFVVLWLMRWS+KLN+FLGVPNLNED+LPE L YLK++M R MN LFPVS+T ATVV
Sbjct: 1 MSDFGFPILYALGLWWFSTGVVLYLDNLPGRTFRWTLLGGTIVLAIAIFGLVVTSASDTIFATYLAFSCGVVIWGVLEMSYFTGFVTGPRKTPCPPACSEWKRFGLAILTSLYHELAILGTLLFMALVTLEEPNQIGTWTFVVLWLMRWSAKLNLFLGVPNLNEDWLPEHLRYLKTYMSKRSMNPLFPVSVTIATVV 197 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20054.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20054.1.1 >prot_P-wetherbeei_contig20054.1.1 ID=prot_P-wetherbeei_contig20054.1.1|Name=mRNA_P-wetherbeei_contig20054.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=198bp MSNIGLPLLYALLLWWFSTGVILYLDSLPRRTFRWSLAGASVLTVAALYAback to top mRNA from alignment at P-wetherbeei_contig20054:655..1248+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20054.1.1 ID=mRNA_P-wetherbeei_contig20054.1.1|Name=mRNA_P-wetherbeei_contig20054.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=594bp|location=Sequence derived from alignment at P-wetherbeei_contig20054:655..1248+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20054:655..1248+ >mRNA_P-wetherbeei_contig20054.1.1 ID=mRNA_P-wetherbeei_contig20054.1.1|Name=mRNA_P-wetherbeei_contig20054.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=594bp|location=Sequence derived from alignment at P-wetherbeei_contig20054:655..1248+ (Phaeothamnion wetherbeei SAG_119_79)back to top |