mRNA_P-wetherbeei_contig20053.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20053.1.1
Unique NamemRNA_P-wetherbeei_contig20053.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig20053.1.1 vs. uniprot
Match: A0A351T6E8_9PROT (Methylenetetrahydrofolate reductase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A351T6E8_9PROT)

HSP 1 Score: 428 bits (1101), Expect = 7.600e-150
Identity = 202/251 (80.48%), Postives = 223/251 (88.84%), Query Frame = 1
Query:    1 PFPPQFVAVTYGAGGSTRQRTHDTVKRIHDETSLVPAAHLTCVGATREEVDEVVRDYWNAGIRHIVALRGDPAEGQSKYVPHPGGYAYASDLVAGIRKIGNFEISVAAYPEGHVDSSDLAVDMDNLKRKIDAGATRAITQFFFDTDCFLRFRDRAVAAGVTVPLIPGIMPVTNFNGARRMAVMNGASVPDWLAKLFEGLEDEAETRKLVAIVVAAEQCVRLRANGIQDFHFYTLNRADLTYALCHILGLRA 753
            PF P+FV+VTYGAGGSTRQRTHDTVKRI DET+L PAAHLTCVGA R EVD+V+ DYW+AG+RHIVALRGDP EGQ  Y P+PGGYAYASDLVAGIR IG+FEISVAAYPEGHVD+ D   ++DNLKRKIDAGATRAITQFFFDTDCFLR+ DR  AAG+T+P++PGIMPVTNF GA RMA MNGASVPDW A LF GLE EAETRKL+A + AAEQCVRLRA+G+ DFHFYTLNRADLTYALCHILGLRA
Sbjct:   28 PFQPEFVSVTYGAGGSTRQRTHDTVKRILDETALTPAAHLTCVGADRAEVDQVIEDYWHAGVRHIVALRGDPPEGQDSYTPYPGGYAYASDLVAGIRAIGDFEISVAAYPEGHVDAPDAQTEIDNLKRKIDAGATRAITQFFFDTDCFLRYLDRIRAAGITIPVVPGIMPVTNFAGASRMAKMNGASVPDWFANLFNGLEQEAETRKLIAAIAAAEQCVRLRAHGVHDFHFYTLNRADLTYALCHILGLRA 278          
BLAST of mRNA_P-wetherbeei_contig20053.1.1 vs. uniprot
Match: A0A2S6TUX8_9PROT (Methylenetetrahydrofolate reductase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2S6TUX8_9PROT)

HSP 1 Score: 370 bits (951), Expect = 1.110e-126
Identity = 174/251 (69.32%), Postives = 207/251 (82.47%), Query Frame = 1
Query:    1 PFPPQFVAVTYGAGGSTRQRTHDTVKRIHDETSLVPAAHLTCVGATREEVDEVVRDYWNAGIRHIVALRGDPAEGQSKYVPHPGGYAYASDLVAGIRKIGNFEISVAAYPEGHVDSSDLAVDMDNLKRKIDAGATRAITQFFFDTDCFLRFRDRAVAAGVTVPLIPGIMPVTNFNGARRMAVMNGASVPDWLAKLFEGLEDEAETRKLVAIVVAAEQCVRLRANGIQDFHFYTLNRADLTYALCHILGLRA 753
            P  P +V+VTYGAGGSTR+RTH TV RI  ET+L PAAHLTCVGATREE+D+V R YW AG++HIVALRGDP EGQ +Y PHPGGYAYASDLVAG++K+ +FEISVAAYPE H ++     D+DNLKRKIDAGA+RAITQFFFD + FLRFRDR  AAG+TVPLIPGI+PVT+F      +  +GAS+P W+ +LFEGL+D+ ETRKLVA  VAAEQC  L A+G+ DFHFYT+NRADL YA+CHILG+RA
Sbjct:   52 PLRPSYVSVTYGAGGSTRERTHATVYRIRHETTLEPAAHLTCVGATREEIDDVARSYWQAGVKHIVALRGDPPEGQDRYRPHPGGYAYASDLVAGLKKVADFEISVAAYPEIHPEAESAEDDIDNLKRKIDAGASRAITQFFFDVEFFLRFRDRVQAAGITVPLIPGILPVTHFTRVAGFSAKSGASMPAWMGELFEGLDDDPETRKLVAASVAAEQCRALHAHGVTDFHFYTMNRADLVYAICHILGVRA 302          
BLAST of mRNA_P-wetherbeei_contig20053.1.1 vs. uniprot
Match: A0A2N6EZ87_9DELT (Methylenetetrahydrofolate reductase n=1 Tax=Desulfuromonas sp. TaxID=892 RepID=A0A2N6EZ87_9DELT)

HSP 1 Score: 366 bits (940), Expect = 5.770e-125
Identity = 170/250 (68.00%), Postives = 209/250 (83.60%), Query Frame = 1
Query:    1 PFPPQFVAVTYGAGGSTRQRTHDTVKRIHDETSLVPAAHLTCVGATREEVDEVVRDYWNAGIRHIVALRGDPAEGQSKYVPHPGGYAYASDLVAGIRKIGNFEISVAAYPEGHVDSSDLAVDMDNLKRKIDAGATRAITQFFFDTDCFLRFRDRAVAAGVTVPLIPGIMPVTNFNGARRMAVMNGASVPDWLAKLFEGLEDEAETRKLVAIVVAAEQCVRLRANGIQDFHFYTLNRADLTYALCHILGLR 750
            P  P +V+VTYGAGG+TR+RTH TV R+  ETSL PAAHLTC+ A+R+E+DE+ R YW+ G+RHIVALRGDPAEGQ +YVPHP GYAYA+DLV+G++++ +FEISVAAYPEGH ++S+   D+DNLKRKID GATRAITQFFFDT+ FLRF DRA AAG+ VP+IPGI+PVTNF   +  A M GA++P W+A LFEGL++E ETRKLVA  VAA+QC  L A+G+  FHFYTLNRADLTYA+CHILG+R
Sbjct:   56 PLQPAYVSVTYGAGGTTRERTHATVSRLRRETSLEPAAHLTCIDASRDEIDEIARQYWDEGVRHIVALRGDPAEGQQRYVPHPQGYAYAADLVSGLKQVADFEISVAAYPEGHPEASNPEADLDNLKRKIDNGATRAITQFFFDTEIFLRFLDRARAAGIEVPIIPGILPVTNFARVKDFAAMCGATIPLWMADLFEGLDNEPETRKLVAATVAADQCRALYAHGVNAFHFYTLNRADLTYAICHILGVR 305          
BLAST of mRNA_P-wetherbeei_contig20053.1.1 vs. uniprot
Match: UPI001F00A21D (methylenetetrahydrofolate reductase n=2 Tax=Roseomonas marmotae TaxID=2768161 RepID=UPI001F00A21D)

HSP 1 Score: 365 bits (938), Expect = 2.160e-124
Identity = 172/256 (67.19%), Postives = 213/256 (83.20%), Query Frame = 1
Query:    1 PFPPQFVAVTYGAGGSTRQRTHDTVKRIHDETSLVPAAHLTCVGATREEVDEVVRDYWNAGIRHIVALRGDPAEGQSKYVPHPGGYAYASDLVAGIRKIGNFEISVAAYPEGHVDSSDLAVDMDNLKRKIDAGATRAITQFFFDTDCFLRFRDRAVAAGVTVPLIPGIMPVTNFNGARRMAVMNGASVPDWLAKLFEGLEDEAETRKLVAIVVAAEQCVRLRANGIQDFHFYTLNRADLTYALCHILGLRAMPVEG 768
            P  P+FV+VTYGAGG+T++RTH TV R+  ETSL PAAHLTCVGA+  EVD+V R YW+AG+RHIVALRGD   G+  YVPHP GYAYA+DLVAG+++IG+FEISVAAYPE H  +S    D+DNLKRKIDAGATRAITQ+FFDTD +LRF DRA+AAG+TVP++PGI+PV+NFN  ++ + M GASVPDW+ KLFEGLE++AETR++VA  +AAEQ   L+ANG+ +FHFYTLNRADL+YA+ HILG R  P +G
Sbjct:   74 PLAPRFVSVTYGAGGTTQERTHATVARLARETSLTPAAHLTCVGASAGEVDDVARRYWDAGVRHIVALRGDAPSGEEGYVPHPQGYAYAADLVAGLKRIGDFEISVAAYPETHPTASSAQADLDNLKRKIDAGATRAITQYFFDTDVYLRFLDRALAAGITVPIVPGILPVSNFNQVKKFSAMCGASVPDWMGKLFEGLEEDAETRRMVAAAMAAEQVRLLQANGVDEFHFYTLNRADLSYAIAHILGAR--PKQG 327          
BLAST of mRNA_P-wetherbeei_contig20053.1.1 vs. uniprot
Match: UPI0019A822B2 (Methylenetetrahydrofolate reductase [NAD(P)H] n=1 Tax=Gemmatimonadaceae bacterium TaxID=2026741 RepID=UPI0019A822B2)

HSP 1 Score: 364 bits (934), Expect = 3.580e-124
Identity = 172/252 (68.25%), Postives = 209/252 (82.94%), Query Frame = 1
Query:    1 PFPPQFVAVTYGAGGSTRQRTHDTVKRIHDETSLVPAAHLTCVGATREEVDEVVRDYWNAGIRHIVALRGDPAEGQ-SKYVPHPGGYAYASDLVAGIRKIGNFEISVAAYPEGHVDSSDLAVDMDNLKRKIDAGATRAITQFFFDTDCFLRFRDRAVAAGVTVPLIPGIMPVTNFNGARRMAVMNGASVPDWLAKLFEGLEDEAETRKLVAIVVAAEQCVRLRANGIQDFHFYTLNRADLTYALCHILGLRA 753
            P  P+FV+VTYGAGG+TR+RTH TV+R+  ETSL PAAHLTCV ATREE+ EV R+YWN G+RH+VALRGDPA G  S Y PHPGGYAYASDLV+G+R+  +FE+SV+AYPEGH  +  +  ++DNLKRKIDAGATRAITQFFFD   +LR+RD A AAG+TVP++PGIMPVTNF+  R+ +VM GASVPD +A+ F+GLED+ +TRKLVA  +A EQC RL   G++DFHFYTLNRADL YA+CHILGLRA
Sbjct:   41 PLSPKFVSVTYGAGGTTRERTHATVRRLLQETSLRPAAHLTCVSATREEIHEVAREYWNTGVRHLVALRGDPAAGLGSTYEPHPGGYAYASDLVSGLRREFDFELSVSAYPEGHPTAGSMQAEIDNLKRKIDAGATRAITQFFFDNAIYLRYRDLARAAGITVPIVPGIMPVTNFSQTRKFSVMAGASVPDSMARHFDGLEDDPDTRKLVAATLATEQCTRLADEGVEDFHFYTLNRADLAYAICHILGLRA 292          
BLAST of mRNA_P-wetherbeei_contig20053.1.1 vs. uniprot
Match: A0A7V4NM00_9BACT (Methylenetetrahydrofolate reductase n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7V4NM00_9BACT)

HSP 1 Score: 361 bits (927), Expect = 3.740e-123
Identity = 170/259 (65.64%), Postives = 207/259 (79.92%), Query Frame = 1
Query:    1 PFPPQFVAVTYGAGGSTRQRTHDTVKRIHDETSLVPAAHLTCVGATREEVDEVVRDYWNAGIRHIVALRGDPAEGQSKYVPHPGGYAYASDLVAGIRKIGNFEISVAAYPEGHVDSSDLAVDMDNLKRKIDAGATRAITQFFFDTDCFLRFRDRAVAAGVTVPLIPGIMPVTNFNGARRMAVMNGASVPDWLAKLFEGLEDEAETRKLVAIVVAAEQCVRLRANGIQDFHFYTLNRADLTYALCHILGLRAMPVEGSKS 777
            P  PQFV+VTYGAGG TR+RTH TVKR+ +ET+L PAAHLTCVGATREEVD V RDYW AG+RH+VALRGDP  G+  YVPHPGGYAYA+DLVAG+R++  FE++VAAYPE H  ++  A D+DNLKRK+DAGATRAITQFFF  D + RF DRA AAG+ +P+IPGIMPVTNF    R A   GA VP  + +LFEGL+ + ETRKLVA  + AEQC+RL   G+++FHFYTLNRADL+YA+CH+LGLR    EG+++
Sbjct:   41 PLAPQFVSVTYGAGGGTRERTHRTVKRLLEETALQPAAHLTCVGATREEVDAVARDYWAAGVRHLVALRGDPPAGEGPYVPHPGGYAYAADLVAGLRRVAPFELTVAAYPEVHPQATSAAADLDNLKRKVDAGATRAITQFFFYNDVYFRFLDRAAAAGIGIPIIPGIMPVTNFAQMTRFAAACGAMVPRAMGRLFEGLDADPETRKLVAATICAEQCLRLADQGVREFHFYTLNRADLSYAICHVLGLRPA-AEGARA 298          
BLAST of mRNA_P-wetherbeei_contig20053.1.1 vs. uniprot
Match: A0A4R0YHE2_9PROT (Methylenetetrahydrofolate reductase n=2 Tax=unclassified Roseococcus TaxID=2639982 RepID=A0A4R0YHE2_9PROT)

HSP 1 Score: 360 bits (923), Expect = 2.450e-122
Identity = 172/250 (68.80%), Postives = 201/250 (80.40%), Query Frame = 1
Query:    1 PFPPQFVAVTYGAGGSTRQRTHDTVKRIHDETSLVPAAHLTCVGATREEVDEVVRDYWNAGIRHIVALRGDPAEGQSKYVPHPGGYAYASDLVAGIRKIGNFEISVAAYPEGHVDSSDLAVDMDNLKRKIDAGATRAITQFFFDTDCFLRFRDRAVAAGVTVPLIPGIMPVTNFNGARRMAVMNGASVPDWLAKLFEGLEDEAETRKLVAIVVAAEQCVRLRANGIQDFHFYTLNRADLTYALCHILGLR 750
            P  P+FV+VTYGAGGSTR RTHDTV R+  ETSL PAAHLTCVGATREEVDEV R YW AG+RHIVALRGDP  G S Y PHPGGYA A DLV G+R+IG+F+ISV AYPE H  +     D+D LKRKIDAGATRA+TQ+FFDTD +LRF DR  AAG+T P++PGIMPVTNF   +R + M GASVPDWLA+LFEGL+++ +TR+LVA  +AAEQ   L+ANG+ +FHFYTLNR DLTYA+ HILG R
Sbjct:   57 PLAPRFVSVTYGAGGSTRSRTHDTVSRLVRETSLTPAAHLTCVGATREEVDEVARAYWAAGVRHIVALRGDPPAGASTYEPHPGGYAQAEDLVRGLRRIGDFDISVGAYPEIHPAALSADSDLDFLKRKIDAGATRAVTQYFFDTDVYLRFLDRCHAAGITAPIVPGIMPVTNFASVKRFSAMCGASVPDWLARLFEGLDEDVDTRRLVAATLAAEQVRILQANGVDEFHFYTLNRPDLTYAIAHILGAR 306          
BLAST of mRNA_P-wetherbeei_contig20053.1.1 vs. uniprot
Match: UPI001BA716F4 (methylenetetrahydrofolate reductase [NAD(P)H] n=2 Tax=Roseomonas hellenica TaxID=2687306 RepID=UPI001BA716F4)

HSP 1 Score: 360 bits (923), Expect = 2.540e-122
Identity = 170/251 (67.73%), Postives = 205/251 (81.67%), Query Frame = 1
Query:    1 PFPPQFVAVTYGAGGSTRQRTHDTVKRIHDETSLVPAAHLTCVGATREEVDEVVRDYWNAGIRHIVALRGDPAEGQSKYVPHPGGYAYASDLVAGIRKIGNFEISVAAYPEGHVDSSDLAVDMDNLKRKIDAGATRAITQFFFDTDCFLRFRDRAVAAGVTVPLIPGIMPVTNFNGARRMAVMNGASVPDWLAKLFEGLEDEAETRKLVAIVVAAEQCVRLRANGIQDFHFYTLNRADLTYALCHILGLRA 753
            P  P+FV+VTYGAGG+T+ RTH TV RI  ETSL PAAHLTCVGATR EVDEV R YW AG+RHIVALRGDP  GQ+ Y PHPGGY YA+DLV G+++IG+FEISVAA+PE H  +     D+DNLKRKIDAGATRAITQ+FFDT+ +LRF DR  AAG+TVP++PGIMPVTNF   +R + M GASVPDW+ KLFEGL+++ ETR++V++VVAAEQ   L+ANG+ +FHFYTLNR DL YA+ H+LG RA
Sbjct:   61 PLAPRFVSVTYGAGGTTQARTHATVSRIVAETSLTPAAHLTCVGATRAEVDEVARGYWAAGVRHIVALRGDPPAGQTVYEPHPGGYDYAADLVEGLKRIGDFEISVAAFPETHPTALSAEQDLDNLKRKIDAGATRAITQYFFDTETYLRFLDRCGAAGITVPIVPGIMPVTNFVQVKRFSAMCGASVPDWMGKLFEGLDEDLETRRMVSVVVAAEQVRLLQANGVDEFHFYTLNRPDLVYAIAHLLGARA 311          
BLAST of mRNA_P-wetherbeei_contig20053.1.1 vs. uniprot
Match: A0A5M6IC71_9PROT (Methylenetetrahydrofolate reductase n=3 Tax=Roseospira marina TaxID=140057 RepID=A0A5M6IC71_9PROT)

HSP 1 Score: 360 bits (923), Expect = 2.630e-122
Identity = 171/255 (67.06%), Postives = 206/255 (80.78%), Query Frame = 1
Query:    1 PFPPQFVAVTYGAGGSTRQRTHDTVKRIHDETSLVPAAHLTCVGATREEVDEVVRDYWNAGIRHIVALRGDPAEGQSKYVPHPGGYAYASDLVAGIRKIGNFEISVAAYPEGHVDSSDLAVDMDNLKRKIDAGATRAITQFFFDTDCFLRFRDRAVAAGVTVPLIPGIMPVTNFNGARRMAVMNGASVPDWLAKLFEGLEDEAETRKLVAIVVAAEQCVRLRANGIQDFHFYTLNRADLTYALCHILGLRA-MPV 762
            P  P FV+VTYGAGGSTR+RTH+TV RI  ET+L PAAHLTCV ATREEVD V R YW+AGIRHIVALRGD  +    Y P PGGYA+A+DLVAG++K+ +FE+SVAAYPE H ++S    D+DNLKRK+DAGATRAITQFFFD D F RFRDRA AAG+TVP++PGI+PV+NF    + A M GAS+P W+A+ F+GL+D+AETRK+VA +VAA+QC  L A G   FHFYTLNRADLTYA+CH+LG+R  MPV
Sbjct:   52 PLDPAFVSVTYGAGGSTRERTHETVTRIARETALKPAAHLTCVDATREEVDTVARQYWDAGIRHIVALRGDAPDSDGVYRPTPGGYAFAADLVAGLKKVADFEVSVAAYPEPHPEASSAEADLDNLKRKVDAGATRAITQFFFDVDVFNRFRDRAAAAGITVPIVPGILPVSNFTTVTKFAGMCGASIPQWMAETFDGLDDDAETRKMVAAMVAAQQCRGLAAAGADQFHFYTLNRADLTYAICHVLGVRPPMPV 306          
BLAST of mRNA_P-wetherbeei_contig20053.1.1 vs. uniprot
Match: A0A2U1V6K5_9PROT (Methylenetetrahydrofolate reductase n=5 Tax=Roseomonas TaxID=125216 RepID=A0A2U1V6K5_9PROT)

HSP 1 Score: 360 bits (924), Expect = 3.540e-122
Identity = 169/250 (67.60%), Postives = 207/250 (82.80%), Query Frame = 1
Query:    1 PFPPQFVAVTYGAGGSTRQRTHDTVKRIHDETSLVPAAHLTCVGATREEVDEVVRDYWNAGIRHIVALRGDPAEGQSKYVPHPGGYAYASDLVAGIRKIGNFEISVAAYPEGHVDSSDLAVDMDNLKRKIDAGATRAITQFFFDTDCFLRFRDRAVAAGVTVPLIPGIMPVTNFNGARRMAVMNGASVPDWLAKLFEGLEDEAETRKLVAIVVAAEQCVRLRANGIQDFHFYTLNRADLTYALCHILGLR 750
            P  P+FV+VTYGAGG+T++RTH TV R+  ETSL PAAHLTCVGA+R EVD+V R YW  G+RHIVALRGD   G++ YVPHP GYAYA+DLVAG+RK+G+FEISVAAYPE H  +S    D+DNLKRKIDAGATRAITQ+FFDT+ FLRF DR +AAG+TVP++PGI+PV+NFN  R+ + M GASVP W+ KLFEGL+D+ +TR++VA  +AAEQ   L+ANG+ +FHFYTLNRADLTYA+ HILG R
Sbjct:   77 PLAPRFVSVTYGAGGTTQERTHATVARLVRETSLTPAAHLTCVGASRGEVDDVARRYWADGVRHIVALRGDAPAGEAGYVPHPDGYAYAADLVAGLRKVGDFEISVAAYPETHPTASSAQHDLDNLKRKIDAGATRAITQYFFDTEVFLRFLDRCLAAGITVPIVPGILPVSNFNQVRKFSAMCGASVPGWMGKLFEGLDDDPDTRRMVAAALAAEQVRLLQANGVDEFHFYTLNRADLTYAIAHILGAR 326          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20053.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A351T6E8_9PROT7.600e-15080.48Methylenetetrahydrofolate reductase n=1 Tax=Alphap... [more]
A0A2S6TUX8_9PROT1.110e-12669.32Methylenetetrahydrofolate reductase n=2 Tax=Alphap... [more]
A0A2N6EZ87_9DELT5.770e-12568.00Methylenetetrahydrofolate reductase n=1 Tax=Desulf... [more]
UPI001F00A21D2.160e-12467.19methylenetetrahydrofolate reductase n=2 Tax=Roseom... [more]
UPI0019A822B23.580e-12468.25Methylenetetrahydrofolate reductase [NAD(P)H] n=1 ... [more]
A0A7V4NM00_9BACT3.740e-12365.64Methylenetetrahydrofolate reductase n=1 Tax=Gemmat... [more]
A0A4R0YHE2_9PROT2.450e-12268.80Methylenetetrahydrofolate reductase n=2 Tax=unclas... [more]
UPI001BA716F42.540e-12267.73methylenetetrahydrofolate reductase [NAD(P)H] n=2 ... [more]
A0A5M6IC71_9PROT2.630e-12267.06Methylenetetrahydrofolate reductase n=3 Tax=Roseos... [more]
A0A2U1V6K5_9PROT3.540e-12267.60Methylenetetrahydrofolate reductase n=5 Tax=Roseom... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20053contigP-wetherbeei_contig20053:1..783 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1336208.JADY01000011_gene3066
Preferred namemetF
PFAMsMTHFR
Model size783
Max annot lvl204441|Rhodospirillales
KEGG rclassRC00081
KEGG koko:K00297
KEGG ReactionR01224,R07168
KEGG Pathwayko00670,ko00720,ko01100,ko01120,ko01200,ko01523,map00670,map00720,map01100,map01120,map01200,map01523
KEGG ModuleM00377
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.62e-123
EggNOG OGsCOG0685@1|root,COG0685@2|Bacteria,1MUC9@1224|Proteobacteria,2TQZA@28211|Alphaproteobacteria,2JQ95@204441|Rhodospirillales
EC1.5.1.20
DescriptionMethylenetetrahydrofolate reductase
Cds size783
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186189.615895-CDS-P-wetherbeei_contig20053:0..7831683186189.615895-CDS-P-wetherbeei_contig20053:0..783Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20053 1..783 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20053.1.1prot_P-wetherbeei_contig20053.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20053 1..783 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20053.1.1

>prot_P-wetherbeei_contig20053.1.1 ID=prot_P-wetherbeei_contig20053.1.1|Name=mRNA_P-wetherbeei_contig20053.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=261bp
PFPPQFVAVTYGAGGSTRQRTHDTVKRIHDETSLVPAAHLTCVGATREEV
DEVVRDYWNAGIRHIVALRGDPAEGQSKYVPHPGGYAYASDLVAGIRKIG
NFEISVAAYPEGHVDSSDLAVDMDNLKRKIDAGATRAITQFFFDTDCFLR
FRDRAVAAGVTVPLIPGIMPVTNFNGARRMAVMNGASVPDWLAKLFEGLE
DEAETRKLVAIVVAAEQCVRLRANGIQDFHFYTLNRADLTYALCHILGLR
AMPVEGSKSI*
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mRNA from alignment at P-wetherbeei_contig20053:1..783+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20053.1.1 ID=mRNA_P-wetherbeei_contig20053.1.1|Name=mRNA_P-wetherbeei_contig20053.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=783bp|location=Sequence derived from alignment at P-wetherbeei_contig20053:1..783+ (Phaeothamnion wetherbeei SAG_119_79)
CCGTTCCCGCCGCAATTTGTTGCCGTGACCTATGGTGCGGGGGGCAGCAC CCGTCAGCGGACCCATGACACGGTAAAGCGTATTCACGATGAAACCTCGC TCGTCCCTGCGGCGCATCTGACCTGTGTCGGCGCGACCCGCGAGGAGGTG GACGAAGTGGTGCGCGATTACTGGAACGCAGGTATCCGCCACATTGTGGC GCTGCGTGGCGATCCGGCGGAAGGGCAGAGCAAATATGTGCCGCATCCGG GCGGGTATGCGTATGCCTCGGACCTGGTGGCGGGTATTCGCAAAATAGGA AATTTTGAAATCAGTGTTGCGGCCTATCCTGAGGGGCATGTAGATTCGTC TGATCTTGCTGTGGACATGGATAATCTCAAGCGCAAGATAGATGCAGGCG CTACGCGCGCGATCACGCAGTTCTTTTTTGATACGGATTGTTTTTTGCGG TTTCGCGACCGCGCAGTTGCGGCCGGCGTCACGGTTCCGCTTATTCCGGG CATTATGCCTGTGACGAATTTCAACGGCGCCCGCCGTATGGCAGTGATGA ATGGGGCCAGTGTGCCAGACTGGCTGGCGAAACTGTTCGAAGGATTGGAA GACGAAGCCGAAACCCGCAAGCTGGTGGCCATTGTGGTGGCTGCGGAGCA ATGTGTGAGGTTGCGCGCCAATGGCATACAGGATTTTCATTTTTATACGT TAAACCGCGCGGATCTGACCTATGCGCTTTGTCACATACTTGGTTTGCGC GCGATGCCGGTGGAAGGGAGCAAGTCCATATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20053:1..783+

>mRNA_P-wetherbeei_contig20053.1.1 ID=mRNA_P-wetherbeei_contig20053.1.1|Name=mRNA_P-wetherbeei_contig20053.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=783bp|location=Sequence derived from alignment at P-wetherbeei_contig20053:1..783+ (Phaeothamnion wetherbeei SAG_119_79)
CCGTTCCCGCCGCAATTTGTTGCCGTGACCTATGGTGCGGGGGGCAGCAC
CCGTCAGCGGACCCATGACACGGTAAAGCGTATTCACGATGAAACCTCGC
TCGTCCCTGCGGCGCATCTGACCTGTGTCGGCGCGACCCGCGAGGAGGTG
GACGAAGTGGTGCGCGATTACTGGAACGCAGGTATCCGCCACATTGTGGC
GCTGCGTGGCGATCCGGCGGAAGGGCAGAGCAAATATGTGCCGCATCCGG
GCGGGTATGCGTATGCCTCGGACCTGGTGGCGGGTATTCGCAAAATAGGA
AATTTTGAAATCAGTGTTGCGGCCTATCCTGAGGGGCATGTAGATTCGTC
TGATCTTGCTGTGGACATGGATAATCTCAAGCGCAAGATAGATGCAGGCG
CTACGCGCGCGATCACGCAGTTCTTTTTTGATACGGATTGTTTTTTGCGG
TTTCGCGACCGCGCAGTTGCGGCCGGCGTCACGGTTCCGCTTATTCCGGG
CATTATGCCTGTGACGAATTTCAACGGCGCCCGCCGTATGGCAGTGATGA
ATGGGGCCAGTGTGCCAGACTGGCTGGCGAAACTGTTCGAAGGATTGGAA
GACGAAGCCGAAACCCGCAAGCTGGTGGCCATTGTGGTGGCTGCGGAGCA
ATGTGTGAGGTTGCGCGCCAATGGCATACAGGATTTTCATTTTTATACGT
TAAACCGCGCGGATCTGACCTATGCGCTTTGTCACATACTTGGTTTGCGC
GCGATGCCGGTGGAAGGGAGCAAGTCCATATGA
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