mRNA_P-wetherbeei_contig20053.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20053.1.1 vs. uniprot
Match: A0A351T6E8_9PROT (Methylenetetrahydrofolate reductase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A351T6E8_9PROT) HSP 1 Score: 428 bits (1101), Expect = 7.600e-150 Identity = 202/251 (80.48%), Postives = 223/251 (88.84%), Query Frame = 1
Query: 1 PFPPQFVAVTYGAGGSTRQRTHDTVKRIHDETSLVPAAHLTCVGATREEVDEVVRDYWNAGIRHIVALRGDPAEGQSKYVPHPGGYAYASDLVAGIRKIGNFEISVAAYPEGHVDSSDLAVDMDNLKRKIDAGATRAITQFFFDTDCFLRFRDRAVAAGVTVPLIPGIMPVTNFNGARRMAVMNGASVPDWLAKLFEGLEDEAETRKLVAIVVAAEQCVRLRANGIQDFHFYTLNRADLTYALCHILGLRA 753
PF P+FV+VTYGAGGSTRQRTHDTVKRI DET+L PAAHLTCVGA R EVD+V+ DYW+AG+RHIVALRGDP EGQ Y P+PGGYAYASDLVAGIR IG+FEISVAAYPEGHVD+ D ++DNLKRKIDAGATRAITQFFFDTDCFLR+ DR AAG+T+P++PGIMPVTNF GA RMA MNGASVPDW A LF GLE EAETRKL+A + AAEQCVRLRA+G+ DFHFYTLNRADLTYALCHILGLRA
Sbjct: 28 PFQPEFVSVTYGAGGSTRQRTHDTVKRILDETALTPAAHLTCVGADRAEVDQVIEDYWHAGVRHIVALRGDPPEGQDSYTPYPGGYAYASDLVAGIRAIGDFEISVAAYPEGHVDAPDAQTEIDNLKRKIDAGATRAITQFFFDTDCFLRYLDRIRAAGITIPVVPGIMPVTNFAGASRMAKMNGASVPDWFANLFNGLEQEAETRKLIAAIAAAEQCVRLRAHGVHDFHFYTLNRADLTYALCHILGLRA 278
BLAST of mRNA_P-wetherbeei_contig20053.1.1 vs. uniprot
Match: A0A2S6TUX8_9PROT (Methylenetetrahydrofolate reductase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2S6TUX8_9PROT) HSP 1 Score: 370 bits (951), Expect = 1.110e-126 Identity = 174/251 (69.32%), Postives = 207/251 (82.47%), Query Frame = 1
Query: 1 PFPPQFVAVTYGAGGSTRQRTHDTVKRIHDETSLVPAAHLTCVGATREEVDEVVRDYWNAGIRHIVALRGDPAEGQSKYVPHPGGYAYASDLVAGIRKIGNFEISVAAYPEGHVDSSDLAVDMDNLKRKIDAGATRAITQFFFDTDCFLRFRDRAVAAGVTVPLIPGIMPVTNFNGARRMAVMNGASVPDWLAKLFEGLEDEAETRKLVAIVVAAEQCVRLRANGIQDFHFYTLNRADLTYALCHILGLRA 753
P P +V+VTYGAGGSTR+RTH TV RI ET+L PAAHLTCVGATREE+D+V R YW AG++HIVALRGDP EGQ +Y PHPGGYAYASDLVAG++K+ +FEISVAAYPE H ++ D+DNLKRKIDAGA+RAITQFFFD + FLRFRDR AAG+TVPLIPGI+PVT+F + +GAS+P W+ +LFEGL+D+ ETRKLVA VAAEQC L A+G+ DFHFYT+NRADL YA+CHILG+RA
Sbjct: 52 PLRPSYVSVTYGAGGSTRERTHATVYRIRHETTLEPAAHLTCVGATREEIDDVARSYWQAGVKHIVALRGDPPEGQDRYRPHPGGYAYASDLVAGLKKVADFEISVAAYPEIHPEAESAEDDIDNLKRKIDAGASRAITQFFFDVEFFLRFRDRVQAAGITVPLIPGILPVTHFTRVAGFSAKSGASMPAWMGELFEGLDDDPETRKLVAASVAAEQCRALHAHGVTDFHFYTMNRADLVYAICHILGVRA 302
BLAST of mRNA_P-wetherbeei_contig20053.1.1 vs. uniprot
Match: A0A2N6EZ87_9DELT (Methylenetetrahydrofolate reductase n=1 Tax=Desulfuromonas sp. TaxID=892 RepID=A0A2N6EZ87_9DELT) HSP 1 Score: 366 bits (940), Expect = 5.770e-125 Identity = 170/250 (68.00%), Postives = 209/250 (83.60%), Query Frame = 1
Query: 1 PFPPQFVAVTYGAGGSTRQRTHDTVKRIHDETSLVPAAHLTCVGATREEVDEVVRDYWNAGIRHIVALRGDPAEGQSKYVPHPGGYAYASDLVAGIRKIGNFEISVAAYPEGHVDSSDLAVDMDNLKRKIDAGATRAITQFFFDTDCFLRFRDRAVAAGVTVPLIPGIMPVTNFNGARRMAVMNGASVPDWLAKLFEGLEDEAETRKLVAIVVAAEQCVRLRANGIQDFHFYTLNRADLTYALCHILGLR 750
P P +V+VTYGAGG+TR+RTH TV R+ ETSL PAAHLTC+ A+R+E+DE+ R YW+ G+RHIVALRGDPAEGQ +YVPHP GYAYA+DLV+G++++ +FEISVAAYPEGH ++S+ D+DNLKRKID GATRAITQFFFDT+ FLRF DRA AAG+ VP+IPGI+PVTNF + A M GA++P W+A LFEGL++E ETRKLVA VAA+QC L A+G+ FHFYTLNRADLTYA+CHILG+R
Sbjct: 56 PLQPAYVSVTYGAGGTTRERTHATVSRLRRETSLEPAAHLTCIDASRDEIDEIARQYWDEGVRHIVALRGDPAEGQQRYVPHPQGYAYAADLVSGLKQVADFEISVAAYPEGHPEASNPEADLDNLKRKIDNGATRAITQFFFDTEIFLRFLDRARAAGIEVPIIPGILPVTNFARVKDFAAMCGATIPLWMADLFEGLDNEPETRKLVAATVAADQCRALYAHGVNAFHFYTLNRADLTYAICHILGVR 305
BLAST of mRNA_P-wetherbeei_contig20053.1.1 vs. uniprot
Match: UPI001F00A21D (methylenetetrahydrofolate reductase n=2 Tax=Roseomonas marmotae TaxID=2768161 RepID=UPI001F00A21D) HSP 1 Score: 365 bits (938), Expect = 2.160e-124 Identity = 172/256 (67.19%), Postives = 213/256 (83.20%), Query Frame = 1
Query: 1 PFPPQFVAVTYGAGGSTRQRTHDTVKRIHDETSLVPAAHLTCVGATREEVDEVVRDYWNAGIRHIVALRGDPAEGQSKYVPHPGGYAYASDLVAGIRKIGNFEISVAAYPEGHVDSSDLAVDMDNLKRKIDAGATRAITQFFFDTDCFLRFRDRAVAAGVTVPLIPGIMPVTNFNGARRMAVMNGASVPDWLAKLFEGLEDEAETRKLVAIVVAAEQCVRLRANGIQDFHFYTLNRADLTYALCHILGLRAMPVEG 768
P P+FV+VTYGAGG+T++RTH TV R+ ETSL PAAHLTCVGA+ EVD+V R YW+AG+RHIVALRGD G+ YVPHP GYAYA+DLVAG+++IG+FEISVAAYPE H +S D+DNLKRKIDAGATRAITQ+FFDTD +LRF DRA+AAG+TVP++PGI+PV+NFN ++ + M GASVPDW+ KLFEGLE++AETR++VA +AAEQ L+ANG+ +FHFYTLNRADL+YA+ HILG R P +G
Sbjct: 74 PLAPRFVSVTYGAGGTTQERTHATVARLARETSLTPAAHLTCVGASAGEVDDVARRYWDAGVRHIVALRGDAPSGEEGYVPHPQGYAYAADLVAGLKRIGDFEISVAAYPETHPTASSAQADLDNLKRKIDAGATRAITQYFFDTDVYLRFLDRALAAGITVPIVPGILPVSNFNQVKKFSAMCGASVPDWMGKLFEGLEEDAETRRMVAAAMAAEQVRLLQANGVDEFHFYTLNRADLSYAIAHILGAR--PKQG 327
BLAST of mRNA_P-wetherbeei_contig20053.1.1 vs. uniprot
Match: UPI0019A822B2 (Methylenetetrahydrofolate reductase [NAD(P)H] n=1 Tax=Gemmatimonadaceae bacterium TaxID=2026741 RepID=UPI0019A822B2) HSP 1 Score: 364 bits (934), Expect = 3.580e-124 Identity = 172/252 (68.25%), Postives = 209/252 (82.94%), Query Frame = 1
Query: 1 PFPPQFVAVTYGAGGSTRQRTHDTVKRIHDETSLVPAAHLTCVGATREEVDEVVRDYWNAGIRHIVALRGDPAEGQ-SKYVPHPGGYAYASDLVAGIRKIGNFEISVAAYPEGHVDSSDLAVDMDNLKRKIDAGATRAITQFFFDTDCFLRFRDRAVAAGVTVPLIPGIMPVTNFNGARRMAVMNGASVPDWLAKLFEGLEDEAETRKLVAIVVAAEQCVRLRANGIQDFHFYTLNRADLTYALCHILGLRA 753
P P+FV+VTYGAGG+TR+RTH TV+R+ ETSL PAAHLTCV ATREE+ EV R+YWN G+RH+VALRGDPA G S Y PHPGGYAYASDLV+G+R+ +FE+SV+AYPEGH + + ++DNLKRKIDAGATRAITQFFFD +LR+RD A AAG+TVP++PGIMPVTNF+ R+ +VM GASVPD +A+ F+GLED+ +TRKLVA +A EQC RL G++DFHFYTLNRADL YA+CHILGLRA
Sbjct: 41 PLSPKFVSVTYGAGGTTRERTHATVRRLLQETSLRPAAHLTCVSATREEIHEVAREYWNTGVRHLVALRGDPAAGLGSTYEPHPGGYAYASDLVSGLRREFDFELSVSAYPEGHPTAGSMQAEIDNLKRKIDAGATRAITQFFFDNAIYLRYRDLARAAGITVPIVPGIMPVTNFSQTRKFSVMAGASVPDSMARHFDGLEDDPDTRKLVAATLATEQCTRLADEGVEDFHFYTLNRADLAYAICHILGLRA 292
BLAST of mRNA_P-wetherbeei_contig20053.1.1 vs. uniprot
Match: A0A7V4NM00_9BACT (Methylenetetrahydrofolate reductase n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7V4NM00_9BACT) HSP 1 Score: 361 bits (927), Expect = 3.740e-123 Identity = 170/259 (65.64%), Postives = 207/259 (79.92%), Query Frame = 1
Query: 1 PFPPQFVAVTYGAGGSTRQRTHDTVKRIHDETSLVPAAHLTCVGATREEVDEVVRDYWNAGIRHIVALRGDPAEGQSKYVPHPGGYAYASDLVAGIRKIGNFEISVAAYPEGHVDSSDLAVDMDNLKRKIDAGATRAITQFFFDTDCFLRFRDRAVAAGVTVPLIPGIMPVTNFNGARRMAVMNGASVPDWLAKLFEGLEDEAETRKLVAIVVAAEQCVRLRANGIQDFHFYTLNRADLTYALCHILGLRAMPVEGSKS 777
P PQFV+VTYGAGG TR+RTH TVKR+ +ET+L PAAHLTCVGATREEVD V RDYW AG+RH+VALRGDP G+ YVPHPGGYAYA+DLVAG+R++ FE++VAAYPE H ++ A D+DNLKRK+DAGATRAITQFFF D + RF DRA AAG+ +P+IPGIMPVTNF R A GA VP + +LFEGL+ + ETRKLVA + AEQC+RL G+++FHFYTLNRADL+YA+CH+LGLR EG+++
Sbjct: 41 PLAPQFVSVTYGAGGGTRERTHRTVKRLLEETALQPAAHLTCVGATREEVDAVARDYWAAGVRHLVALRGDPPAGEGPYVPHPGGYAYAADLVAGLRRVAPFELTVAAYPEVHPQATSAAADLDNLKRKVDAGATRAITQFFFYNDVYFRFLDRAAAAGIGIPIIPGIMPVTNFAQMTRFAAACGAMVPRAMGRLFEGLDADPETRKLVAATICAEQCLRLADQGVREFHFYTLNRADLSYAICHVLGLRPA-AEGARA 298
BLAST of mRNA_P-wetherbeei_contig20053.1.1 vs. uniprot
Match: A0A4R0YHE2_9PROT (Methylenetetrahydrofolate reductase n=2 Tax=unclassified Roseococcus TaxID=2639982 RepID=A0A4R0YHE2_9PROT) HSP 1 Score: 360 bits (923), Expect = 2.450e-122 Identity = 172/250 (68.80%), Postives = 201/250 (80.40%), Query Frame = 1
Query: 1 PFPPQFVAVTYGAGGSTRQRTHDTVKRIHDETSLVPAAHLTCVGATREEVDEVVRDYWNAGIRHIVALRGDPAEGQSKYVPHPGGYAYASDLVAGIRKIGNFEISVAAYPEGHVDSSDLAVDMDNLKRKIDAGATRAITQFFFDTDCFLRFRDRAVAAGVTVPLIPGIMPVTNFNGARRMAVMNGASVPDWLAKLFEGLEDEAETRKLVAIVVAAEQCVRLRANGIQDFHFYTLNRADLTYALCHILGLR 750
P P+FV+VTYGAGGSTR RTHDTV R+ ETSL PAAHLTCVGATREEVDEV R YW AG+RHIVALRGDP G S Y PHPGGYA A DLV G+R+IG+F+ISV AYPE H + D+D LKRKIDAGATRA+TQ+FFDTD +LRF DR AAG+T P++PGIMPVTNF +R + M GASVPDWLA+LFEGL+++ +TR+LVA +AAEQ L+ANG+ +FHFYTLNR DLTYA+ HILG R
Sbjct: 57 PLAPRFVSVTYGAGGSTRSRTHDTVSRLVRETSLTPAAHLTCVGATREEVDEVARAYWAAGVRHIVALRGDPPAGASTYEPHPGGYAQAEDLVRGLRRIGDFDISVGAYPEIHPAALSADSDLDFLKRKIDAGATRAVTQYFFDTDVYLRFLDRCHAAGITAPIVPGIMPVTNFASVKRFSAMCGASVPDWLARLFEGLDEDVDTRRLVAATLAAEQVRILQANGVDEFHFYTLNRPDLTYAIAHILGAR 306
BLAST of mRNA_P-wetherbeei_contig20053.1.1 vs. uniprot
Match: UPI001BA716F4 (methylenetetrahydrofolate reductase [NAD(P)H] n=2 Tax=Roseomonas hellenica TaxID=2687306 RepID=UPI001BA716F4) HSP 1 Score: 360 bits (923), Expect = 2.540e-122 Identity = 170/251 (67.73%), Postives = 205/251 (81.67%), Query Frame = 1
Query: 1 PFPPQFVAVTYGAGGSTRQRTHDTVKRIHDETSLVPAAHLTCVGATREEVDEVVRDYWNAGIRHIVALRGDPAEGQSKYVPHPGGYAYASDLVAGIRKIGNFEISVAAYPEGHVDSSDLAVDMDNLKRKIDAGATRAITQFFFDTDCFLRFRDRAVAAGVTVPLIPGIMPVTNFNGARRMAVMNGASVPDWLAKLFEGLEDEAETRKLVAIVVAAEQCVRLRANGIQDFHFYTLNRADLTYALCHILGLRA 753
P P+FV+VTYGAGG+T+ RTH TV RI ETSL PAAHLTCVGATR EVDEV R YW AG+RHIVALRGDP GQ+ Y PHPGGY YA+DLV G+++IG+FEISVAA+PE H + D+DNLKRKIDAGATRAITQ+FFDT+ +LRF DR AAG+TVP++PGIMPVTNF +R + M GASVPDW+ KLFEGL+++ ETR++V++VVAAEQ L+ANG+ +FHFYTLNR DL YA+ H+LG RA
Sbjct: 61 PLAPRFVSVTYGAGGTTQARTHATVSRIVAETSLTPAAHLTCVGATRAEVDEVARGYWAAGVRHIVALRGDPPAGQTVYEPHPGGYDYAADLVEGLKRIGDFEISVAAFPETHPTALSAEQDLDNLKRKIDAGATRAITQYFFDTETYLRFLDRCGAAGITVPIVPGIMPVTNFVQVKRFSAMCGASVPDWMGKLFEGLDEDLETRRMVSVVVAAEQVRLLQANGVDEFHFYTLNRPDLVYAIAHLLGARA 311
BLAST of mRNA_P-wetherbeei_contig20053.1.1 vs. uniprot
Match: A0A5M6IC71_9PROT (Methylenetetrahydrofolate reductase n=3 Tax=Roseospira marina TaxID=140057 RepID=A0A5M6IC71_9PROT) HSP 1 Score: 360 bits (923), Expect = 2.630e-122 Identity = 171/255 (67.06%), Postives = 206/255 (80.78%), Query Frame = 1
Query: 1 PFPPQFVAVTYGAGGSTRQRTHDTVKRIHDETSLVPAAHLTCVGATREEVDEVVRDYWNAGIRHIVALRGDPAEGQSKYVPHPGGYAYASDLVAGIRKIGNFEISVAAYPEGHVDSSDLAVDMDNLKRKIDAGATRAITQFFFDTDCFLRFRDRAVAAGVTVPLIPGIMPVTNFNGARRMAVMNGASVPDWLAKLFEGLEDEAETRKLVAIVVAAEQCVRLRANGIQDFHFYTLNRADLTYALCHILGLRA-MPV 762
P P FV+VTYGAGGSTR+RTH+TV RI ET+L PAAHLTCV ATREEVD V R YW+AGIRHIVALRGD + Y P PGGYA+A+DLVAG++K+ +FE+SVAAYPE H ++S D+DNLKRK+DAGATRAITQFFFD D F RFRDRA AAG+TVP++PGI+PV+NF + A M GAS+P W+A+ F+GL+D+AETRK+VA +VAA+QC L A G FHFYTLNRADLTYA+CH+LG+R MPV
Sbjct: 52 PLDPAFVSVTYGAGGSTRERTHETVTRIARETALKPAAHLTCVDATREEVDTVARQYWDAGIRHIVALRGDAPDSDGVYRPTPGGYAFAADLVAGLKKVADFEVSVAAYPEPHPEASSAEADLDNLKRKVDAGATRAITQFFFDVDVFNRFRDRAAAAGITVPIVPGILPVSNFTTVTKFAGMCGASIPQWMAETFDGLDDDAETRKMVAAMVAAQQCRGLAAAGADQFHFYTLNRADLTYAICHVLGVRPPMPV 306
BLAST of mRNA_P-wetherbeei_contig20053.1.1 vs. uniprot
Match: A0A2U1V6K5_9PROT (Methylenetetrahydrofolate reductase n=5 Tax=Roseomonas TaxID=125216 RepID=A0A2U1V6K5_9PROT) HSP 1 Score: 360 bits (924), Expect = 3.540e-122 Identity = 169/250 (67.60%), Postives = 207/250 (82.80%), Query Frame = 1
Query: 1 PFPPQFVAVTYGAGGSTRQRTHDTVKRIHDETSLVPAAHLTCVGATREEVDEVVRDYWNAGIRHIVALRGDPAEGQSKYVPHPGGYAYASDLVAGIRKIGNFEISVAAYPEGHVDSSDLAVDMDNLKRKIDAGATRAITQFFFDTDCFLRFRDRAVAAGVTVPLIPGIMPVTNFNGARRMAVMNGASVPDWLAKLFEGLEDEAETRKLVAIVVAAEQCVRLRANGIQDFHFYTLNRADLTYALCHILGLR 750
P P+FV+VTYGAGG+T++RTH TV R+ ETSL PAAHLTCVGA+R EVD+V R YW G+RHIVALRGD G++ YVPHP GYAYA+DLVAG+RK+G+FEISVAAYPE H +S D+DNLKRKIDAGATRAITQ+FFDT+ FLRF DR +AAG+TVP++PGI+PV+NFN R+ + M GASVP W+ KLFEGL+D+ +TR++VA +AAEQ L+ANG+ +FHFYTLNRADLTYA+ HILG R
Sbjct: 77 PLAPRFVSVTYGAGGTTQERTHATVARLVRETSLTPAAHLTCVGASRGEVDDVARRYWADGVRHIVALRGDAPAGEAGYVPHPDGYAYAADLVAGLRKVGDFEISVAAYPETHPTASSAQHDLDNLKRKIDAGATRAITQYFFDTEVFLRFLDRCLAAGITVPIVPGILPVSNFNQVRKFSAMCGASVPGWMGKLFEGLDDDPDTRRMVAAALAAEQVRLLQANGVDEFHFYTLNRADLTYAIAHILGAR 326 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20053.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20053.1.1 >prot_P-wetherbeei_contig20053.1.1 ID=prot_P-wetherbeei_contig20053.1.1|Name=mRNA_P-wetherbeei_contig20053.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=261bp PFPPQFVAVTYGAGGSTRQRTHDTVKRIHDETSLVPAAHLTCVGATREEVback to top mRNA from alignment at P-wetherbeei_contig20053:1..783+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20053.1.1 ID=mRNA_P-wetherbeei_contig20053.1.1|Name=mRNA_P-wetherbeei_contig20053.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=783bp|location=Sequence derived from alignment at P-wetherbeei_contig20053:1..783+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20053:1..783+ >mRNA_P-wetherbeei_contig20053.1.1 ID=mRNA_P-wetherbeei_contig20053.1.1|Name=mRNA_P-wetherbeei_contig20053.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=783bp|location=Sequence derived from alignment at P-wetherbeei_contig20053:1..783+ (Phaeothamnion wetherbeei SAG_119_79)back to top |