mRNA_P-wetherbeei_contig20041.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
|
Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20041.1.1 vs. uniprot
Match: A0A6N7FDM3_9PROT (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FDM3_9PROT) HSP 1 Score: 132 bits (333), Expect = 6.220e-36 Identity = 67/106 (63.21%), Postives = 79/106 (74.53%), Query Frame = 1
Query: 1 SWSEDLAGTGVTVNVLVPGGAADTPIIPEESPYDRAKLIRPDVMVAPIRWLMSDLSDGVTGKRFLGAKWDAGAPWQEAMATSGSGTAWPELAAAASSRGQPLPEGG 318
+W+ DL GTGVT NVLVPGGAADTP++P E+ YDR+KL P VMVAPIRWL S SDGVTG+RF+G W+ PWQ+AM +G+ WPELAA AS R Q PE G
Sbjct: 179 AWAGDLEGTGVTCNVLVPGGAADTPMVPPETGYDRSKLNDPRVMVAPIRWLCSTASDGVTGRRFIGRDWEPDTPWQDAMKVAGAPVGWPELAARAS-RTQARPEPG 283
BLAST of mRNA_P-wetherbeei_contig20041.1.1 vs. uniprot
Match: A0A2E5V432_9PROT (Short-chain dehydrogenase n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E5V432_9PROT) HSP 1 Score: 108 bits (269), Expect = 1.990e-26 Identity = 54/101 (53.47%), Postives = 70/101 (69.31%), Query Frame = 1
Query: 1 SWSEDLAGTGVTVNVLVPGGAADTPIIPEESPYDRAKLIRPDVMVAPIRWLMSDLSDGVTGKRFLGAKWDAGAPWQEAMATSGSGTAWPELAAAASSRGQP 303
+W++DL TGVT NVLVPGGAADTP++P ESPY+R L++P+VM P WL S+ SDG+ RFL WD A + + +GS AWP+LA AA+ GQP
Sbjct: 177 AWADDLTDTGVTCNVLVPGGAADTPMVPNESPYERQNLVQPEVMGPPACWLASNDSDGINSMRFLARNWDPAATDSDNIKNAGSPAAWPDLADAAAV-GQP 276
BLAST of mRNA_P-wetherbeei_contig20041.1.1 vs. uniprot
Match: A0A2E5PNB3_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E5PNB3_9PROT) HSP 1 Score: 107 bits (268), Expect = 2.340e-26 Identity = 49/94 (52.13%), Postives = 68/94 (72.34%), Query Frame = 1
Query: 1 SWSEDLAGTGVTVNVLVPGGAADTPIIPEESPYDRAKLIRPDVMVAPIRWLMSDLSDGVTGKRFLGAKWDAGAPWQEAMATSGSGTAWPELAAA 282
+W+++L GTG+TVNV+VPGG DTP + ES D AK+++P+VM PI WL + +DGVTG+RF+G KWD +A+A +GS WP+LAAA
Sbjct: 178 AWAKELEGTGITVNVVVPGGPTDTPFLKPESEMDPAKMLKPEVMGPPIAWLCTSKADGVTGQRFIGGKWDPTMSDADAVAEAGSSAGWPDLAAA 271
BLAST of mRNA_P-wetherbeei_contig20041.1.1 vs. uniprot
Match: A0A2E6GMH0_9PROT (Short-chain dehydrogenase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6GMH0_9PROT) HSP 1 Score: 107 bits (267), Expect = 3.930e-26 Identity = 55/102 (53.92%), Postives = 71/102 (69.61%), Query Frame = 1
Query: 1 SWSEDLAGTGVTVNVLVPGGAADTPIIPEESPYDRAKLIRPDVMVAPIRWLMSDLSDGVTGKRFLGAKWDAGAPWQEAMATSGSGTAWPELAAAASSRGQPL 306
+W++DL TGVT NVLVPGGAADTP++P ESPY R L++P VM P WL S+ SDG+ RFL WD A ++ + ++G+ AWPELA AAS GQP+
Sbjct: 177 AWADDLQDTGVTCNVLVPGGAADTPMVPNESPYARENLVQPVVMGPPACWLASEDSDGINSMRFLARNWDPDASDEDNIKSAGAPAAWPELADAASV-GQPV 277
BLAST of mRNA_P-wetherbeei_contig20041.1.1 vs. uniprot
Match: A0A2E9LMV9_9CHLR (Short-chain dehydrogenase n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A2E9LMV9_9CHLR) HSP 1 Score: 106 bits (264), Expect = 1.390e-25 Identity = 50/93 (53.76%), Postives = 65/93 (69.89%), Query Frame = 1
Query: 7 SEDLAGTGVTVNVLVPGGAADTPIIPEESPYDRAKLIRPDVMVAPIRWLMSDLSDGVTGKRFLGAKWDAGAPWQEAMATSGSGTAWPELAAAA 285
S +L GTGVTVNVLVPGG A T +IP+++ Y R +I PDVM+AP+ WL SD SDG+ G+RF+G WD P +E + S + AWP+L A A
Sbjct: 199 SRELEGTGVTVNVLVPGGMASTDLIPDDTDYQREAMINPDVMMAPVVWLSSDESDGINGQRFIGYHWDENLPLEERLEKSAAPAAWPQLGAQA 291
BLAST of mRNA_P-wetherbeei_contig20041.1.1 vs. uniprot
Match: A0A1F3ZJ75_9PROT (Uncharacterized protein n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_62_17 TaxID=1797484 RepID=A0A1F3ZJ75_9PROT) HSP 1 Score: 105 bits (262), Expect = 1.550e-25 Identity = 49/88 (55.68%), Postives = 64/88 (72.73%), Query Frame = 1
Query: 1 SWSEDLAGTGVTVNVLVPGGAADTPIIPEESPYDRAKLIRPDVMVAPIRWLMSDLSDGVTGKRFLGAKWDAGAPWQEAMATSGSGTAW 264
+W+++LAGTGVT NVL+PGGAADT +IP E DR++L+RP MV P+ WL+S SDGVTG+RF W AP EA+A+SG+ W
Sbjct: 182 AWAKELAGTGVTANVLLPGGAADTAMIPHEDFADRSRLVRPQAMVPPLLWLLSRASDGVTGRRFTAKNWSPLAPLAEAIASSGAQAGW 269
BLAST of mRNA_P-wetherbeei_contig20041.1.1 vs. uniprot
Match: A0A2E3K3T6_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E3K3T6_9PROT) HSP 1 Score: 104 bits (260), Expect = 5.100e-25 Identity = 58/103 (56.31%), Postives = 70/103 (67.96%), Query Frame = 1
Query: 1 SWSEDL--AGTGVTVNVLVPGGAADTPIIPEESPYDRAKLIRPDVMVAPIRWLMSDLSDGVTGKRFLGAKWDAGAPWQEAMATSGSGTAWPELAAAASSRGQP 303
SW++D AG+ VT NVLVPGGAADTP++P +SPY R L+RP+ MVAP +L SD S + RFLG WDA Q + SG+ AWPELAAAAS GQP
Sbjct: 192 SWADDFSNAGSKVTANVLVPGGAADTPMVPHDSPYKREHLVRPEAMVAPAIFLASDESQKINSMRFLGRLWDAHESDQRNIEVSGAPAAWPELAAAAS-LGQP 293
BLAST of mRNA_P-wetherbeei_contig20041.1.1 vs. uniprot
Match: A0A2A5F2B9_9CHLR (Short-chain dehydrogenase n=4 Tax=Chloroflexi TaxID=200795 RepID=A0A2A5F2B9_9CHLR) HSP 1 Score: 104 bits (259), Expect = 6.080e-25 Identity = 49/93 (52.69%), Postives = 67/93 (72.04%), Query Frame = 1
Query: 7 SEDLAGTGVTVNVLVPGGAADTPIIPEESPYDRAKLIRPDVMVAPIRWLMSDLSDGVTGKRFLGAKWDAGAPWQEAMATSGSGTAWPELAAAA 285
S +L GTGVTVNVLVPGG A+T +IP+++ +DR +I+P+VM AP+ WL SD SDG+ G+RF+G WD P +E + + S AWP+L A A
Sbjct: 190 SRELEGTGVTVNVLVPGGRANTDLIPDDTVFDRDDMIQPEVMKAPVVWLASDASDGINGQRFIGYYWDEDLPLEERLEKAASPAAWPQLGAQA 282
BLAST of mRNA_P-wetherbeei_contig20041.1.1 vs. uniprot
Match: A0A2E7QV99_9PROT (Short-chain dehydrogenase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7QV99_9PROT) HSP 1 Score: 103 bits (256), Expect = 2.680e-24 Identity = 47/89 (52.81%), Postives = 61/89 (68.54%), Query Frame = 1
Query: 4 WSEDLAGTGVTVNVLVPGGAADTPIIPEESPYDRAKLIRPDVMVAPIRWLMSDLSDGVTGKRFLGAKWDAGAPWQEAMATSGSGTAWPE 270
W++DL TGVT N+LVPGG +T IPE +P+DR KL +P+ M API WL S+LS+GVT RF+ WD AP +A+ SG AWP+
Sbjct: 217 WAKDLESTGVTANILVPGGPVNTEFIPENAPFDRTKLTQPEAMRAPICWLASELSNGVTNMRFVARSWDPDAPLADAIKESGGPCAWPD 305
BLAST of mRNA_P-wetherbeei_contig20041.1.1 vs. uniprot
Match: A0A3D2BVX7_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A3D2BVX7_9PROT) HSP 1 Score: 97.4 bits (241), Expect = 9.730e-24 Identity = 48/89 (53.93%), Postives = 61/89 (68.54%), Query Frame = 1
Query: 7 SEDLAGTGVTVNVLVPGGAADTPIIPEESPYDRAKLIRPDVMVAPIRWLMSDLSDGVTGKRFLGAKWDAGAPWQEAMATSGSGTAWPEL 273
S+DL GTGV+ NVLVPGG +T +IPE+S R KLI+P+VM PI+WL S SDG TG RF+GA WD P + + SG+ AW +L
Sbjct: 42 SQDLEGTGVSANVLVPGGMVNTRMIPEQSGIPREKLIQPNVMENPIKWLASVASDGTTGMRFIGALWDEALPMDQRIEQSGAPCAWTQL 130 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20041.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20041.1.1 >prot_P-wetherbeei_contig20041.1.1 ID=prot_P-wetherbeei_contig20041.1.1|Name=mRNA_P-wetherbeei_contig20041.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=110bp SWSEDLAGTGVTVNVLVPGGAADTPIIPEESPYDRAKLIRPDVMVAPIRWback to top mRNA from alignment at P-wetherbeei_contig20041:919..1248- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20041.1.1 ID=mRNA_P-wetherbeei_contig20041.1.1|Name=mRNA_P-wetherbeei_contig20041.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=330bp|location=Sequence derived from alignment at P-wetherbeei_contig20041:919..1248- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20041:919..1248- >mRNA_P-wetherbeei_contig20041.1.1 ID=mRNA_P-wetherbeei_contig20041.1.1|Name=mRNA_P-wetherbeei_contig20041.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=330bp|location=Sequence derived from alignment at P-wetherbeei_contig20041:919..1248- (Phaeothamnion wetherbeei SAG_119_79)back to top |