mRNA_P-wetherbeei_contig20022.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig20022.2.1 vs. uniprot
Match: A0A521YYX7_9PROT (O-antigen ligase domain-containing protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521YYX7_9PROT) HSP 1 Score: 259 bits (663), Expect = 1.370e-81 Identity = 129/203 (63.55%), Postives = 164/203 (80.79%), Query Frame = 1
Query: 1 VMTRSRMGNTAFFSSLLVAGCIALALSRHASRSTMVLIGSLIVMDIFIVGAWFGVEKTVQRIEQTTAQDVEERVDPSGQALAIYRDFPLFGSGAGTFYTVFSRYRGEDILPFFDFVHNDYVQMLTDTGVIGLALVGAFALMALVAALLAQARRRDPLARGMGFAAVMGIVSLGIHSAVDFNLQIPANAFAFMLLLAFGWLSLY 609
VMTRSRMGNTAFFSSLL+AG +AL L RHA+RST++LI SLIV+DIFIVG WFGVEKT+ R++QTTA DVE+RV+PS AL + +D+P+ G+GAG+FY F RYRG DI F+D HNDY Q L +TG +G L+G L+AL+ A+L +RRRDPLARG FAA+MG+ ++ IHS VDFNLQIPANA AF++LLA+ W++L+
Sbjct: 244 VMTRSRMGNTAFFSSLLIAGSVALLLRRHATRSTVILIASLIVIDIFIVGTWFGVEKTLDRLQQTTAVDVEQRVEPSVYALDMLKDYPVLGAGAGSFYGAFPRYRGPDIGAFYDHAHNDYTQFLVETGPLGALLIGTLPLLALINAVLVLSRRRDPLARGFAFAALMGVTAIAIHSTVDFNLQIPANALAFVVLLAYAWIALF 446
BLAST of mRNA_P-wetherbeei_contig20022.2.1 vs. uniprot
Match: A0A0S8B0S8_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Betaproteobacteria bacterium SG8_39 TaxID=1703390 RepID=A0A0S8B0S8_9PROT) HSP 1 Score: 243 bits (619), Expect = 1.560e-78 Identity = 123/191 (64.40%), Postives = 150/191 (78.53%), Query Frame = 1
Query: 64 IALALSRHASRSTMVLIGSLIVMDIFIVGAWFGVEKTVQRIEQTTAQDVEERVDPSGQALAIYRDFPLFGSGAGTFYTVFSRYRGEDILPFFDFVHNDYVQMLTDTGVIGLALVGAFALMALVAALLAQARRRDPLARGMGFAAVMGIVSLGIHSAVDFNLQIPANAFAFMLLLAFGWLSLYLGRESASAG 636
I LALSRHA+RST+V I SLI++DIFIVGAWFGV+KT+QRIEQTTA +V ERVDP+ A+ I D+P FG+G GTFY + RYRG DILP++D VHNDY+Q+ T+TGV GL L G L++ AA+LA +RRRDPLARG+ F VMGI +L IHS VDFNLQIPANAF F +LLA GWL+L+L R+ G
Sbjct: 1 IGLALSRHATRSTVVFIASLIIIDIFIVGAWFGVDKTIQRIEQTTAGEVRERVDPAIYAVRILDDYPWFGTGGGTFYNAYPRYRGADILPYYDHVHNDYMQLATETGVPGLVLAGGVVLLSFFAAVLALSRRRDPLARGVAFGVVMGITALAIHSTVDFNLQIPANAFIFSVLLALGWLALFLERQVRGQG 191
BLAST of mRNA_P-wetherbeei_contig20022.2.1 vs. uniprot
Match: A0A6M4H9X2_9PROT (Uncharacterized protein n=1 Tax=Usitatibacter palustris TaxID=2732487 RepID=A0A6M4H9X2_9PROT) HSP 1 Score: 237 bits (605), Expect = 9.560e-73 Identity = 119/205 (58.05%), Postives = 157/205 (76.59%), Query Frame = 1
Query: 7 TRSRMGNTAFFSSLLVAGCIALALSRHASRSTMVLIGSLIVMDIFIVGAWFGVEKTVQRIEQTTAQDVEERVDPSGQALAIYRDFPLFGSGAGTFYTVFSRYRGEDILPFFDFVHNDYVQMLTDTGVIGLALVGAFALMALVAALLAQARRRDPLARGMGFAAVMGIVSLGIHSAVDFNLQIPANAFAFMLLLAFGWLSLYLGRE 621
T SRMGNTAFF+SL+VAG I +ALSR A+R+T+VL+ SL+V+D+ IVG+WFGVEK RIEQTT DV+ER DP+ L + D+P+ G+G GTFY F RYR ++ FFD+ HNDY Q ++G++GLAL+ ++L AA+LAQARRRDPL RGM FA++MG+ ++ IH+ VDFNLQIPANA F++LLAF W+SL+L R
Sbjct: 264 THSRMGNTAFFASLIVAGVIGIALSRKATRNTVVLLVSLVVIDLVIVGSWFGVEKLAARIEQTTIADVQEREDPATHTLKLVEDYPVLGAGPGTFYVAFPRYRPASVVLFFDYAHNDYAQFAAESGLLGLALLALVVAVSLAAAVLAQARRRDPLMRGMAFASIMGVSAILIHATVDFNLQIPANAVFFVVLLAFAWISLHLERH 468
BLAST of mRNA_P-wetherbeei_contig20022.2.1 vs. uniprot
Match: A0A6M4GWQ9_9PROT (Uncharacterized protein n=1 Tax=Usitatibacter rugosus TaxID=2732067 RepID=A0A6M4GWQ9_9PROT) HSP 1 Score: 234 bits (597), Expect = 8.550e-72 Identity = 114/207 (55.07%), Postives = 157/207 (75.85%), Query Frame = 1
Query: 7 TRSRMGNTAFFSSLLVAGCIALALSRHASRSTMVLIGSLIVMDIFIVGAWFGVEKTVQRIEQTTAQDVEERVDPSGQALAIYRDFPLFGSGAGTFYTVFSRYRGEDILPFFDFVHNDYVQMLTDTGVIGLALVGAFALMALVAALLAQARRRDPLARGMGFAAVMGIVSLGIHSAVDFNLQIPANAFAFMLLLAFGWLSLYLGRESA 627
T SRMGNTAFFS+L++AG + + LSR+A+R+T++L+ SL+V+D+ IVG+WFGVEK RIE TT +DV R +P+ L + +D+P+ G+G GTFY F +YR E ++ F+D HNDY Q+ ++G++GL+L+G L++L+AAL AQ RRDPL RGM FA+ MGI +L IHS VDFNLQIPANA FM++LA GW+SL+L R A
Sbjct: 246 THSRMGNTAFFSALMIAGVLGIVLSRYATRNTVILLASLVVLDLLIVGSWFGVEKLAARIEATTVEDVRTREEPAAYTLPLIKDYPILGAGPGTFYVAFPKYRPETVVSFYDHAHNDYAQIAAESGILGLSLLGGVVLLSLIAALRAQWVRRDPLMRGMAFASTMGITALLIHSWVDFNLQIPANAALFMVILALGWISLHLDRAHA 452
BLAST of mRNA_P-wetherbeei_contig20022.2.1 vs. uniprot
Match: A0A1F4AC77_9PROT (Uncharacterized protein (Fragment) n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_65_20 TaxID=1797488 RepID=A0A1F4AC77_9PROT) HSP 1 Score: 228 bits (582), Expect = 3.960e-69 Identity = 122/215 (56.74%), Postives = 152/215 (70.70%), Query Frame = 1
Query: 1 VMTRSRMGNTAFFSSLLVAGCIALALSRHASRSTMVLIGSLIVMDIFIVGAWFGVEKTVQRIEQTTA----------------QDVEERVDPSGQALAIYRDFPLFGSGAGTFYTVFSRYRGEDILPFFDFVHNDYVQMLTDTGVIGLALVGAFALMALVAALLAQARRRDPLARGMGFAAVMGIVSLGIHSAVDFNLQIPANAFAFMLLLAFGW 597
VMTRSRMGN+AFF S+LVAG I LALSRHA+RST++L+ SL+V+DIF+VGAWFGVEK + R+EQT+ Q VEERV+P AL ++FP GSG GTFY VF +YR ++I ++D HNDYVQ T+TGV+G+ LVG L + AL Q +RRDPLARG+ F MGI++L IHS VDFNLQ PANA F++LLA GW
Sbjct: 275 VMTRSRMGNSAFFVSMLVAGAIGLALSRHATRSTVILLVSLVVIDIFVVGAWFGVEKVIHRLEQTSLTRSDKARDQASGKGQEQSVEERVEPGLMALKALKEFPFVGSGGGTFYVVFPKYREQEIDGWYDHAHNDYVQFATETGVLGVGLVGLLVLATFLVALKTQYQRRDPLARGVAFGVTMGIIALMIHSWVDFNLQRPANALTFVVLLAMGW 489
BLAST of mRNA_P-wetherbeei_contig20022.2.1 vs. uniprot
Match: A0A3M0YFJ5_9GAMM (O-antigen ligase family protein (Fragment) n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M0YFJ5_9GAMM) HSP 1 Score: 222 bits (566), Expect = 1.270e-68 Identity = 121/216 (56.02%), Postives = 158/216 (73.15%), Query Frame = 1
Query: 1 VMTRSRMGNTAFFSSLLVAGCIALALSRHASRSTMVLIGSLIVMDIFIVGAWFGVEKTVQRIEQTT-AQDVEERVDPSGQALAIYRDFPLFGSGAGTFYTVFSRYRGEDILPFFDFVHNDYVQMLTDTGVIGLALVGAFALMALVAALLAQARRRDPLARGMGFAAVMGIVSLGIHSAVDFNLQIPANAFAFMLLLAFGWLSLYLGRESASAGNRP 645
V+T SRMGN+AF SLL+AG +AL L R A R ++LI SLI++DI IVG WFG ++ +R+E+T+ A +V + VD A +++DFPL G+G GTFY VF RYRGED FFD HNDY+++L + G+IGL L+G +++L A++LAQARRRDPL RGMGFAA MGI +L IHSAVDFNLQIPANA FM++LA GW++ G S A +P
Sbjct: 115 VLTHSRMGNSAFLFSLLIAGGLALVLWRGAPRPVVILISSLILVDILIVGTWFGFDRVAKRLEETSLATEVRDEVDV--YAFRLWQDFPLTGAGLGTFYAVFPRYRGEDAEGFFDHAHNDYLEILDEGGIIGLGLLGGAVVLSLAASVLAQARRRDPLLRGMGFAATMGIAALLIHSAVDFNLQIPANAATFMVVLALGWIAF--GLRSRRAAGKP 326
BLAST of mRNA_P-wetherbeei_contig20022.2.1 vs. uniprot
Match: A0A521XSY3_9PROT (O-antigen ligase domain-containing protein n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521XSY3_9PROT) HSP 1 Score: 222 bits (565), Expect = 1.550e-66 Identity = 121/219 (55.25%), Postives = 159/219 (72.60%), Query Frame = 1
Query: 1 VMTRSRMGNTAFFSSLLVAGCIALALSRHASRSTMVLIGSLIVMDIFIVGAWFGVEKTVQRIEQTTAQDVEERVDPSGQALAIYRDFPLFGSGAGTFYTVFSRYRGEDILPFFDFVHNDYVQMLTDTGVIGLALVGAFALMALVAALLAQARRRDPLARGMGFAAVMGIVSLGIHSAVDFNLQIPANAFAFMLLLAFGWLSLYLGRESASAGNRPGRAR 657
V+T SRMGNT+FF SLLVAG I L L++ A++S +VLI SLIV+DIFIVGA+FGV++ + RIEQTT Q E+R + + AL +++D+P+FGSG G+F VF RY +D+ + HNDY+Q+ +TGV+G+ L+G +L+AAL AQ R DPL R + FAA+M I++LG+HSAVDFNLQIPANA FMLLLAF W+SLY R A PG R
Sbjct: 251 VLTHSRMGNTSFFVSLLVAGAIGLLLAKRATKSMVVLIASLIVIDIFIVGAYFGVQRVLDRIEQTTMQ-AEDRDEIAIDALRMWKDYPVFGSGLGSFQVVFPRYSQQDLGVLYTHAHNDYLQLAAETGVVGITLLGLLVFTSLLAALRAQIMRHDPLMRAISFAAMMAIIALGMHSAVDFNLQIPANALTFMLLLAFAWISLYH-RYDGEAQAEPGSRR 467
BLAST of mRNA_P-wetherbeei_contig20022.2.1 vs. uniprot
Match: A0A1F4B257_9PROT (Uncharacterized protein n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4B257_9PROT) HSP 1 Score: 221 bits (563), Expect = 4.990e-66 Identity = 127/239 (53.14%), Postives = 162/239 (67.78%), Query Frame = 1
Query: 1 VMTRSRMGNTAFFSSLLVAGCIALALSRHASRSTMVLIGSLIVMDIFIVGAWFGVEKTVQRIEQTTA------------QDVEERVDPSGQALAIYRDFPLFGSGAGTFYTVFSRYRGEDILPFF--DFVHNDYVQMLTDTGVIGLALVGAFALMALVAALLAQARRRDPLARGMGFAAVMGIVSLGIHSAVDFNLQIPANAFAFMLLLAFGWLSLYLGRES---------ASAGNRPG 648
VMTRSR GN AFF+S+LVAG + LALSRHA+RS ++LI SL+V+D+FIVGAWFGV+K + R+EQT+ Q +EER DP+ AL + RD+P GSG GTF + F +YR E++ F + HNDY Q L +TGVIGLAL+G L+ V AL AQ +R DPLARG+ F A MGIVSL IHS VDFNLQ P+NA F+++LA W + Y+GR+ A+AG PG
Sbjct: 280 VMTRSRGGNGAFFASMLVAGALGLALSRHATRSVVILIASLVVIDVFIVGAWFGVDKVMHRLEQTSLTRDARAVAGTSEQSLEERGDPALFALNMARDYPWLGSGGGTFASTFMKYRTEELAGDFYVNAAHNDYAQFLVETGVIGLALMGLVVLLCFVTALKAQYQRTDPLARGVAFGATMGIVSLMIHSWVDFNLQTPSNALTFVVVLAMAWPAAYVGRQRHASESEEDRAAAGTAPG 518
BLAST of mRNA_P-wetherbeei_contig20022.2.1 vs. uniprot
Match: A0A496V678_9GAMM (O-antigen ligase family protein n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A496V678_9GAMM) HSP 1 Score: 220 bits (561), Expect = 5.570e-66 Identity = 115/209 (55.02%), Postives = 157/209 (75.12%), Query Frame = 1
Query: 1 VMTRSRMGNTAFFSSLLVAGCIALALSRHASRSTMVLIGSLIVMDIFIVGAWFGVEKTVQRIEQTT-AQDVEERVDPSGQALAIYRDFPLFGSGAGTFYTVFSRYRGEDILPFFDFVHNDYVQMLTDTGVIGLALVGAFALMALVAALLAQARRRDPLARGMGFAAVMGIVSLGIHSAVDFNLQIPANAFAFMLLLAFGWLSLYLGRES 624
V+TRSRMGNTAFF+S++VAG I L LSRHA+RST++L+ SLIV+DI IVGAWFG++K QR+EQT+ + + VD L ++D+ L GSG G+FYTVF RYR D+ FFD HNDY++ +TG++G+ LVG+ + +L+ ALLAQ RRR+ L RG+ F+A+MGI+++ HS VDFNLQIPANA FM++LA W++L+L S
Sbjct: 263 VLTRSRMGNTAFFASMMVAGVIGLMLSRHATRSTVILLVSLIVIDILIVGAWFGIDKVAQRLEQTSFVSETRDEVDV--HTLPYWQDYLLTGSGLGSFYTVFPRYRESDVDGFFDHAHNDYLEFGAETGIVGVLLVGSSVIFSLIVALLAQYRRRESLYRGVAFSAMMGIIAIMTHSFVDFNLQIPANAATFMVILAMAWIALFLPSHS 469
BLAST of mRNA_P-wetherbeei_contig20022.2.1 vs. uniprot
Match: A0A661BRX0_9GAMM (O-antigen ligase family protein n=2 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A661BRX0_9GAMM) HSP 1 Score: 219 bits (558), Expect = 9.930e-66 Identity = 118/215 (54.88%), Postives = 156/215 (72.56%), Query Frame = 1
Query: 1 VMTRSRMGNTAFFSSLLVAGCIALALSRHASRSTMVLIGSLIVMDIFIVGAWFGVEKTVQRIEQTTAQDVEERVDPSGQALAIYRDFPLFGSGAGTFYTVFSRYRGEDILPFFDFVHNDYVQMLTDTGVIGLALVGAFALMALVAALLAQARRRDPLARGMGFAAVMGIVSLGIHSAVDFNLQIPANAFAFMLLLAFGWLSLYLGRESASAGNRP 645
V+T SRMGNTAFF SL +AG I L S++++RS ++L+ SL+++DI IVG WFG+EK QR+EQT+ E R + + AL ++D+ L GSG G+FY VF +YRG DI +HNDY+Q TDTGVIGL L+G + +L AALLAQ RR DPL RGM FA++MGI+++ IHS+VDFNLQIPANA F++LLA GW+SL LGR ++ P
Sbjct: 257 VLTHSRMGNTAFFVSLFIAGAIGLVFSKNSTRSVVILLVSLVIIDILIVGQWFGLEKVKQRLEQTSLA-TENRDEVNIYALRQWQDYRLTGSGLGSFYAVFPQYRGADIHEDNYQMHNDYLQFATDTGVIGLILLGLITVSSLCAALLAQYRRHDPLMRGMSFASIMGIIAILIHSSVDFNLQIPANAATFVILLALGWISLSLGRRELNSSGHP 470 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20022.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig20022.2.1 >prot_P-wetherbeei_contig20022.2.1 ID=prot_P-wetherbeei_contig20022.2.1|Name=mRNA_P-wetherbeei_contig20022.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=223bp MTRSRMGNTAFFSSLLVAGCIALALSRHASRSTMVLIGSLIVMDIFIVGAback to top mRNA from alignment at P-wetherbeei_contig20022:578..1249- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig20022.2.1 ID=mRNA_P-wetherbeei_contig20022.2.1|Name=mRNA_P-wetherbeei_contig20022.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=672bp|location=Sequence derived from alignment at P-wetherbeei_contig20022:578..1249- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig20022:578..1249- >mRNA_P-wetherbeei_contig20022.2.1 ID=mRNA_P-wetherbeei_contig20022.2.1|Name=mRNA_P-wetherbeei_contig20022.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=669bp|location=Sequence derived from alignment at P-wetherbeei_contig20022:578..1249- (Phaeothamnion wetherbeei SAG_119_79)back to top |