mRNA_P-wetherbeei_contig2001.1.9 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig2001.1.9
Unique NamemRNA_P-wetherbeei_contig2001.1.9
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig2001.1.9 vs. uniprot
Match: A0A835Z5S6_9STRA (DNA ligase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z5S6_9STRA)

HSP 1 Score: 375 bits (963), Expect = 5.010e-114
Identity = 263/722 (36.43%), Postives = 337/722 (46.68%), Query Frame = 1
Query:  988 HLADTLEALIGTTKRLRKADILVNCFRSLLALSPGDVVPALYLCSNSVGE------LGVGGSMVSAAVQQATGATRAQLHGLYRIKGDLGDAAFALKSNVRLMIEPKRLTIGGVYDSLTKLSRLAGQGSEKRKKDLMAHMIQAAKGVEVRFVVRTLLQHIRTGATLVSVLAALAMAVSIHEAAYGPLRVGASAAGAAXXXXXXXXXXXXXXXXXXXDNGGXXXXXXXXXXXXXXXXDGGGSRGMMADLNADGAGGPQFPAPAAAAAPLTPPDGRRVTERSVAARVADAQAKVKRAFDLCPHLGELATALLQGGVGALEEACQMRVGMPITPMLSNPSTSVCDLFKKLGGRECLVEYKYDGERSQIHLLEDGDVRIFSRNLDNTTGRYQDVARLIPAVKTAGVSNFIIDAELVACDPAQDYKILPFQMLSTRSR--------------ATTSTTV---------AVCAFVFDLMCLNGLDLTGEPLSERRRLLQES-FAPQRGKFEFATATVVPGLIAAARAAATTQRGQEAAMAAFMRAGALMQPSPPTAEPENILEEGEDCSEEAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVTAESDGAQCGSGNCGGHGIAELVEAAEMVGVAMADALQNSCEGVMAKALAVGSEYTAGRHSESWVKLKKDYVEGLGDSFDLVPIGAWWGNGRKAGWYSPVLLACYDPETEDLQ 3063
            HLA   EAL  TTKRL+KADIL NCFRSLLAL+P D++PA++L  N V E      +GVGGS V++A+ QATG    QL  L R  GDLGDAA A K+N RL+  PK LTI GV+D+L  L+R  G GSE RK   MA +++A +G E R++VRTL+++IRTGATL+SVL ALA AV+IH  +                                                         SR                              GR   ER  A R+A AQ  V+  ++L P L  L  AL++GGV    E C +RVGMP+ PML+ PST V DL   LG    LVE KYDG R+Q+H+  DG V I+SR L+NTT ++ D A  + A   +  +  IIDAE+ A DPAQD+++LPFQMLSTR R              +++ TTV         AVC   FDL+  NG      PL +RRRLL E+  A + G+F  ATA                                                                                                                           E  E +   + +++  SCEGV+AK L  GSEY  G    +WVKLK+DY+ GLGD+FDLVPIG W+G GRKAGW SP+LLAC+DP++ +LQ
Sbjct:    2 HLAAAFEALAATTKRLKKADILANCFRSLLALTPEDLLPAVFLSCNKVAENMEGVDMGVGGSQVTSAILQATGTKPEQLRRLNRSTGDLGDAAQACKANQRLLASPKPLTIRGVHDALLGLARDGGTGSEGRKVAAMAKLLRACQGPETRWLVRTLIRNIRTGATLLSVLDALAAAVAIHTLS---------------------------------------------------------SRSQ----------------------------GRVPVERIAAPRIAAAQRAVRDCYNLRPDLPLLVGALIEGGVEGAVETCTVRVGMPVRPMLAKPSTGVEDLLSTLGDGSFLVERKYDGMRAQVHVAADGQVTIYSRKLENTTAQFHDAAAAVSAAVRSPGAGLIIDAEITAVDPAQDFRLLPFQMLSTRPRKGQQQQQDVSAALASSSGTTVEPSGAPGSVAVCVVAFDLLAYNGAPCLALPLEDRRRLLAEATVAAEAGRFILATA---------------------------------------------------------------------------------------------------------------------------ETGEQILRFLHESIAASCEGVIAKRLGRGSEYVPGDRGSAWVKLKRDYIPGLGDTFDLVPIGGWYGQGRKAGWLSPILLACWDPDSGELQ 515          
BLAST of mRNA_P-wetherbeei_contig2001.1.9 vs. uniprot
Match: A0A1Y1IJ60_KLENI (DNA ligase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IJ60_KLENI)

HSP 1 Score: 341 bits (874), Expect = 1.630e-94
Identity = 237/725 (32.69%), Postives = 327/725 (45.10%), Query Frame = 1
Query:  931 QYRPVSDAPWRAGEPAPYQHLADTLEALIGTTKRLRKADILVNCFRSLLALSPGDVVPALYLCSNSVG------ELGVGGSMVSAAVQQATGATRAQLHGLYRIKGDLGDAAFALKSNVRLMIEPKRLTIGGVYDSLTKLSRLAGQGSEKRKKDLMAHMIQAAKGVEVRFVVRTLLQHIRTGATLVSVLAALAMAVSIHEAAYGPLRVGASAAGAAXXXXXXXXXXXXXXXXXXXDNGGXXXXXXXXXXXXXXXXDGGGSRGMMADLNADGAGGPQFPAPAAAAAPLTPPDGRRVTERSVAARVADAQAKVKRAFDLCPHLGELATALLQGGVGALEEACQMRVGMPITPMLSNPSTSVCDLFKKLGGRECLVEYKYDGERSQIHLLEDGDVRIFSRNLDNTTGRYQDVARLIPAVKTAGVSNFIIDAELVACDPAQDYKILPFQMLSTRSRATTSTTV-------AVCAFVFDLMCLNGLDLTGEPLSERRRLLQESFAPQR-GKFEFATATVVPGLIAAARAAATTQRGQEAAMAAFMRAGALMQPSPPTAEPENILEEGEDCSEEAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVTAESDGAQCGSGNCGGHGIAELVEAAEMVGVAMADALQNSCEGVMAKALAVGSEYTAGRHSESWVKLKKDYVEGLGDSFDLVPIGAWWGNGRKAGWYSPVLLACYDPETEDLQ 3063
            +Y P+  A W  GE APY HLA T E L     RL+ ADIL N FRSLLALSP D++PA+YL +N V       ++ +GGS V AA+ +ATG ++AQ+  LY   GDLGD A A K     ++ P  L +  VY +L K+S+  G G   RKK+++  +++A +  E +FVVRTL+ ++R GA + +VL ALA AV IH++                                                                 L +D   GP                        + +++ +A A V  A++ CP+L  L   L++GG+ A+     + +G PI PML+  +  + ++ K+   +    E+KYDG+R+QIHLL DG VRIFSRN D+ T ++ DV   +      G S+FIIDAELVA D +   K++ FQ LSTR+R    T +       AVC F FDLM ++G  L  E   ERRR +  +F     G FEFA    V                                      EP                                                           ESD               EL   + ++   + DA   SCEG+M KAL   + Y A + S+SW+K+KKDY+EGL DS DLVPIGAW+G GRK GW+SP LL CYDP+ E+ Q
Sbjct: 1211 KYDPIGHACWTRGEAAPYLHLARTFEILERERGRLKMADILCNMFRSLLALSPDDILPAVYLSTNRVAPDFENVDMSIGGSTVGAAIAEATGTSKAQMRELYNSLGDLGDVALACKQRQATLMAPPPLRVAQVYRALRKISKETGPGCNNRKKNIVLGLLRACREKETQFVVRTLILNMRIGAMMKTVLPALAQAVVIHKS-----------------------------------------------------------------LPSDAPAGPAI--------------------NGLKSKLQEASAAVVEAYNFCPNLDVLVPTLVEGGIEAVIAQGAVALGTPIKPMLAKITNGIPEVLKRFQSQAFTAEFKYDGQRAQIHLLPDGTVRIFSRNCDDNTAKFPDVIATVKQAARGGCSSFIIDAELVAVDRSAGNKLMAFQTLSTRARGGEKTKIELADVKIAVCVFAFDLMFVDGQALVKESFRERRRRMHAAFPKHSAGHFEFAREATVE-------------------------------------EP-----------------------------------------------------------ESD--------------PELEATSSLLQTFLQDAFAASCEGIMVKALDKDAGYAASKRSDSWLKVKKDYIEGLNDSLDLVPIGAWYGQGRKVGWFSPFLLGCYDPDREEYQ 1740          
BLAST of mRNA_P-wetherbeei_contig2001.1.9 vs. uniprot
Match: A0A3B6FT20_WHEAT (DNA ligase n=5 Tax=Triticum TaxID=4564 RepID=A0A3B6FT20_WHEAT)

HSP 1 Score: 317 bits (811), Expect = 5.140e-92
Identity = 214/721 (29.68%), Postives = 332/721 (46.05%), Query Frame = 1
Query:  943 VSDAPWRAGEPAPYQHLADTLEALIGTTKRLRKADILVNCFRSLLALSPGDVVPALYLCSNSVG------ELGVGGSMVSAAVQQATGATRAQLHGLYRIKGDLGDAAFALKSNVRLMIEPKRLTIGGVYDSLTKLSRLAGQGSEKRKKDLMAHMIQAAKGVEVRFVVRTLLQHIRTGATLVSVLAALAMAVSIHE-AAYGPLRVGASAAGAAXXXXXXXXXXXXXXXXXXXDNGGXXXXXXXXXXXXXXXXDGGGSRGMMADLNADGAGGPQFPAPAAAAAPLTPPDGRRVTERSVAARVADAQAKVKRAFDLCPHLGELATALLQGGVGALEEACQMRVGMPITPMLSNPSTSVCDLFKKLGGRECLVEYKYDGERSQIHLLEDGDVRIFSRNLDNTTGRYQDVARLIPAVKTAGVSNFIIDAELVACDPAQDYKILPFQMLSTRSRATTSTTVAV-------CAFVFDLMCLNGLDLTGEPLSERRRLLQESFAPQRGKFEFATATVVPGLIAAARAAATTQRGQEAAMAAFMRAGALMQPSPPTAEPENILEEGEDCSEEAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVTAESDGAQCGSGNCGGHGIAELVEAAEMVGVAMADALQNSCEGVMAKALAVGSEYTAGRHSESWVKLKKDYVEGLGDSFDLVPIGAWWGNGRKAGWYSPVLLACYDPETEDLQ 3063
             S A W AG+PAPY HLA T + +     +++   +L N FRSLLALSP DV+PA+YLC+N +       EL +GGS+V +A++++ G +++++H +Y+  GDLGD A   + N  L+  P+ L++  VY +L KLS ++G GS  R+K L+ H+I++ + +E++F+VRT ++++R GA + ++L ALA AV +HE  + GP+                                                                                        V+   V +++     ++  A+++ P++  L  +LL  G      +  M  G PI PML+  +  V    K   GR    EYKYDG+R+QIH L DG V+IFSR + ++T ++ D+  +I  +  + V++FI+DAE+V  D  +  +++ FQ LS+R R + ++++A+       C FVFD+M  NG  L   PL +RR  + + F  + G  E A   +V                                                   EE EA                                                         H ++   E           A Q+SCEG+M K L + + Y+A +  +SW+K+K+DYVEGLGDS DLVPIGAW+GNGRKAGWYSP L+ACY+PE+E+ Q
Sbjct:    6 TSAACWTAGQPAPYLHLARTFDLVEREKGKIKTTAMLCNMFRSLLALSPNDVLPAVYLCTNKISPDHENMELNIGGSLVISAMEESLGTSKSKIHEMYKTYGDLGDVAQECRQNQTLLAPPRPLSVRDVYSTLRKLSAISGGGSAGRRKILVLHLIRSCREMEMKFLVRTPVRNLRIGAMMKTILPALAHAVVLHEKCSTGPV----------------------------------------------------------------------------------------VSLEDVKSQLQSLSTEITEAYNVIPNMDLLVPSLLCEGATFAASSLAMVPGTPIPPMLARITNGVTQALKLFHGRAFTCEYKYDGQRAQIHRLTDGSVQIFSRQMKDSTSQFPDLVNMIKELCNSEVASFILDAEVVGIDRNKGNRLMSFQELSSRERGSKNSSIAIQNIKVDICVFVFDIMFCNGQRLLDNPLRQRRSYIHDLFQEKPGYLELAQQLIV---------------------------------------------------EEDEASIDNSSTL-------------------------------------------------HRMSSFFE----------KACQSSCEGIMLKTLDIDAGYSASKRCDSWLKVKRDYVEGLGDSLDLVPIGAWYGNGRKAGWYSPFLMACYNPESEEFQ 528          
BLAST of mRNA_P-wetherbeei_contig2001.1.9 vs. uniprot
Match: A0A3B6GVB5_WHEAT (DNA ligase n=15 Tax=Triticinae TaxID=1648030 RepID=A0A3B6GVB5_WHEAT)

HSP 1 Score: 325 bits (832), Expect = 1.110e-90
Identity = 217/726 (29.89%), Postives = 337/726 (46.42%), Query Frame = 1
Query:  928 QQYRPVSDAPWRAGEPAPYQHLADTLEALIGTTKRLRKADILVNCFRSLLALSPGDVVPALYLCSNSVG------ELGVGGSMVSAAVQQATGATRAQLHGLYRIKGDLGDAAFALKSNVRLMIEPKRLTIGGVYDSLTKLSRLAGQGSEKRKKDLMAHMIQAAKGVEVRFVVRTLLQHIRTGATLVSVLAALAMAVSIHE-AAYGPLRVGASAAGAAXXXXXXXXXXXXXXXXXXXDNGGXXXXXXXXXXXXXXXXDGGGSRGMMADLNADGAGGPQFPAPAAAAAPLTPPDGRRVTERSVAARVADAQAKVKRAFDLCPHLGELATALLQGGVGALEEACQMRVGMPITPMLSNPSTSVCDLFKKLGGRECLVEYKYDGERSQIHLLEDGDVRIFSRNLDNTTGRYQDVARLIPAVKTAGVSNFIIDAELVACDPAQDYKILPFQMLSTRSRATTSTTVAV-------CAFVFDLMCLNGLDLTGEPLSERRRLLQESFAPQRGKFEFATATVVPGLIAAARAAATTQRGQEAAMAAFMRAGALMQPSPPTAEPENILEEGEDCSEEAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVTAESDGAQCGSGNCGGHGIAELVEAAEMVGVAMADALQNSCEGVMAKALAVGSEYTAGRHSESWVKLKKDYVEGLGDSFDLVPIGAWWGNGRKAGWYSPVLLACYDPETEDLQ 3063
            ++Y P+  A W AG PAPY HLA T + +     +++   +L N FRSLLALSP DV+PA+YLC+N +       EL +GGS+V +A++++ G +++++H +Y+  GDLGD A   + N  L+  P+ L++  VY +L KLS ++G GS  R+K L+ H+I++ + +E++F+VRTL++++R GA + ++L ALA AV +HE  + GP+                                                                                        V+   V +++     +V  A+++ P++  L  +LL  G      +  M  G PI PML+  +  V    K   GR    EYKYDG+R+QIH L DG V+IFSR + ++T R+ D+  +I  +  + V++FI+DAE+V  D  +  +++ FQ LS+R R + ++++A+       C FVFD+M  NG  L   PL +RR  + + F  + G  E A                                                                                                     +T E D A   + +   H ++   E           A Q+SCEG+M K L + + Y+A +  +SW+K+K+DYVEGLGDS DLVPIGAW+GNGRKAGWYSP L+ACY+PE+E+ Q
Sbjct:  530 EKYLPIEHACWTAGHPAPYLHLARTFDLVEREKGKIKTTAMLCNMFRSLLALSPDDVLPAVYLCTNKISPDHENMELNIGGSLVISAMEESLGTSKSKIHEMYKTYGDLGDVAQECRQNQTLLAPPRPLSVRDVYSTLRKLSAISGGGSAGRRKILVLHLIRSCREMEMKFLVRTLVRNLRIGAMMKTILPALAHAVVLHEKCSTGPV----------------------------------------------------------------------------------------VSLEGVKSQLQSLSTEVTEAYNVIPNMDLLVPSLLCEGATFAASSLAMVPGTPIPPMLARITNGVTQALKLFHGRAFTCEYKYDGQRAQIHRLTDGSVQIFSRQMKDSTSRFPDLVNMIKELCNSEVASFILDAEVVGIDRNKGNRLMSFQELSSRERGSKNSSIAIQNIKVDICVFVFDIMFCNGQRLLDNPLRQRRSYIHDLFQEKPGYLELAQQ---------------------------------------------------------------------------------------------------LTVEEDEASIDNSSTL-HRMSSFFE----------KACQSSCEGIMLKTLDIDAGYSASKRCDSWLKVKRDYVEGLGDSLDLVPIGAWYGNGRKAGWYSPFLMACYNPESEEFQ 1057          
BLAST of mRNA_P-wetherbeei_contig2001.1.9 vs. uniprot
Match: A0A176VVZ8_MARPO (DNA ligase n=3 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A176VVZ8_MARPO)

HSP 1 Score: 328 bits (842), Expect = 1.440e-90
Identity = 240/726 (33.06%), Postives = 333/726 (45.87%), Query Frame = 1
Query:  931 QYRPVSDAPWRAGEPAPYQHLADTLEALIGTTKRLRKADILVNCFRSLLALSPGDVVPALYLCSNSVG------ELGVGGSMVSAAVQQATGATRAQLHGLYRIKGDLGDAAFALKSNVRLMIEPKRLTIGGVYDSLTKLSRLAGQGSEKRKKDLMAHMIQAAKGVEVRFVVRTLLQHIRTGATLVSVLAALAMAVSIHEAAYGPLRVGASAAGAAXXXXXXXXXXXXXXXXXXXDNGGXXXXXXXXXXXXXXXXDGGGSRGMMADLNADGAGGPQFPAPAAAAAPLTPPDGRRVTERSVAARVADAQAKVKRAFDLCPHLGELATALLQGGVGALEEACQMRVGMPITPMLSNPSTSVCDLFKKLGGRECLVEYKYDGERSQIHLLEDGDVRIFSRNLDNTTGRYQDVARLIPAVKTAGVSNFIIDAELVACDPAQDYKILPFQMLSTRSRATT--------STTVAVCAFVFDLMCLNGLDLTGEPLSERRRLLQESFAPQR-GKFEFATATVVPGLIAAARAAATTQRGQEAAMAAFMRAGALMQPSPPTAEPENILEEGEDCSEEAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVTAESDGAQCGSGNCGGHGIAELVEAAEMVGVAMADALQNSCEGVMAKALAVGSEYTAGRHSESWVKLKKDYVEGLGDSFDLVPIGAWWGNGRKAGWYSPVLLACYDPETEDLQ 3063
            +Y P+  A W  GE APY HLA   + +   + RLR AD+L N FRSLLALSP  V+PA+YL +N +       +L +GGS+VS AV +  G +RA+L  +Y   GDLGD A A +    ++  P  L I  V+ +L ++S+ +G GS  RKKDL+  +++A +  E++++VRTL+Q++R GA + +VL+ALA AV +H                                                                           P   AP  A A L P    +  E ++A         V  A++  P+L  L   L++GGV AL     +  G PI PML+  +  + +L K+  G+    EYKYDG+R+QIH+L DG  RIFSRN ++TTGR+ DVA +  A     +++FIIDAE+VA D   D K++ FQ LSTR R +         +  V+VC F FD+M  N   L      ERR+ ++  F   + G F +AT   +                                      EPE+   +    S++ E                                                           G  E   AA             SCEG+MAKAL V S Y A + S+SW+K+K+DY+EGL DS DLVPIGAW+GNGRKAGWYSP LLACYDPE E+ Q
Sbjct:  990 KYSPIEHACWEPGEGAPYLHLARAFDLVEQESGRLRTADMLCNMFRSLLALSPDAVLPAVYLTTNRLAPDFESVDLNIGGSIVSTAVGEVAGVSRAKLREMYTSMGDLGDVAQACRQTQSILRLPPPLRICQVFSTLKQISKESGGGSGGRKKDLVLSLLRACREKEMKYIVRTLVQNMRIGAMMKTVLSALAQAVVLHHTF------------------------------------------------------------------------PADQAPNEALAKLKP----KFQEAAIA---------VVEAYNFLPNLDLLVPTLVKGGVAALSANISISPGTPIKPMLAKITNGIPELLKRFEGQSFTCEYKYDGQRAQIHMLADGSFRIFSRNCEDTTGRFPDVADICRAAAREDLTSFIIDAEVVAVDREHDNKLMAFQHLSTRERGSRDGGSVNLQNIKVSVCVFAFDMMYANQESLVKMTFRERRKCMRHWFPNIKPGHFGYATEITI--------------------------------------EPEDDQSDSTSTSQKVE-----------------------------------------------------------GFLEETFAA-------------SCEGLMAKALDVDSNYMASKRSDSWLKIKRDYMEGLNDSLDLVPIGAWYGNGRKAGWYSPFLLACYDPEREEYQ 1520          
BLAST of mRNA_P-wetherbeei_contig2001.1.9 vs. uniprot
Match: A0A3B6EHL6_WHEAT (DNA ligase n=18 Tax=Triticeae TaxID=147389 RepID=A0A3B6EHL6_WHEAT)

HSP 1 Score: 325 bits (834), Expect = 6.530e-90
Identity = 216/726 (29.75%), Postives = 338/726 (46.56%), Query Frame = 1
Query:  928 QQYRPVSDAPWRAGEPAPYQHLADTLEALIGTTKRLRKADILVNCFRSLLALSPGDVVPALYLCSNSVG------ELGVGGSMVSAAVQQATGATRAQLHGLYRIKGDLGDAAFALKSNVRLMIEPKRLTIGGVYDSLTKLSRLAGQGSEKRKKDLMAHMIQAAKGVEVRFVVRTLLQHIRTGATLVSVLAALAMAVSIHE-AAYGPLRVGASAAGAAXXXXXXXXXXXXXXXXXXXDNGGXXXXXXXXXXXXXXXXDGGGSRGMMADLNADGAGGPQFPAPAAAAAPLTPPDGRRVTERSVAARVADAQAKVKRAFDLCPHLGELATALLQGGVGALEEACQMRVGMPITPMLSNPSTSVCDLFKKLGGRECLVEYKYDGERSQIHLLEDGDVRIFSRNLDNTTGRYQDVARLIPAVKTAGVSNFIIDAELVACDPAQDYKILPFQMLSTRSRATTSTTVAV-------CAFVFDLMCLNGLDLTGEPLSERRRLLQESFAPQRGKFEFATATVVPGLIAAARAAATTQRGQEAAMAAFMRAGALMQPSPPTAEPENILEEGEDCSEEAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVTAESDGAQCGSGNCGGHGIAELVEAAEMVGVAMADALQNSCEGVMAKALAVGSEYTAGRHSESWVKLKKDYVEGLGDSFDLVPIGAWWGNGRKAGWYSPVLLACYDPETEDLQ 3063
            ++YRP+  A W AG+PAPY HLA T + +     +++   +L N FRSLLALSP DV+PA+YLC+N +       EL +GGS+V +A++++ G +++++H +Y+  GDLGD A   + N  L+  P+ L++  VY +L KLS ++G GS  R+K L+ H+I++ + +E++F+VRTL++++R GA + ++L ALA A+ +HE  + GP+                                                                                        V+   V +++     +V  A+++ P++  L  +LL  G      +  M  G PI PML+  +  V    K   GR    EYKYDG+R+QIH L DG V+IFSR + ++T R+ D+  +I  +  + V++FI+DAE+V  D  +  +++ FQ LS+R R + ++++A+       C FVFD+M  NG  L   PL +RR  + + F  +    E A                                                                                                     +T E D A   + +   H ++   E           A Q+SCEG+M K L + + Y+A +  +SW+K+K+DYVEGLGDS DLVPIGAW+GNGRKAGWYSP L+ACY+PE+E+ Q
Sbjct:  794 EKYRPIEHACWTAGQPAPYLHLARTFDLVEREKGKIKTTAMLCNMFRSLLALSPDDVLPAVYLCTNKISPDHENVELNIGGSLVISAMEESLGTSKSKIHEMYKTYGDLGDVAQECRQNQTLLAPPRPLSVRDVYSTLRKLSAISGGGSAGRRKILVLHLIRSCREMEMKFLVRTLVRNLRIGAMMKTILPALAHAIVLHEKCSTGPV----------------------------------------------------------------------------------------VSLEGVKSQLQSLSTEVTEAYNVIPNMDLLVPSLLCEGATFAASSLAMVPGTPIPPMLARITNGVTQALKLFHGRAFTCEYKYDGQRAQIHRLTDGSVQIFSRQMKDSTSRFPDLVNMIKELCNSEVASFILDAEVVGIDRNKGNRLMSFQELSSRERGSKNSSIAIQNIKVDICVFVFDIMFCNGQRLLDNPLRQRRSYIHDLFQEKPAYLELAQQ---------------------------------------------------------------------------------------------------LTVEEDEASIDNSSTL-HRMSSFFE----------KACQSSCEGIMLKTLDIDAGYSASKRCDSWLKVKRDYVEGLGDSLDLVPIGAWYGNGRKAGWYSPFLMACYNPESEEFQ 1321          
BLAST of mRNA_P-wetherbeei_contig2001.1.9 vs. uniprot
Match: A0A1U8K7F8_GOSHI (DNA ligase n=22 Tax=Gossypium TaxID=3633 RepID=A0A1U8K7F8_GOSHI)

HSP 1 Score: 323 bits (828), Expect = 3.240e-89
Identity = 225/725 (31.03%), Postives = 333/725 (45.93%), Query Frame = 1
Query:  931 QYRPVSDAPWRAGEPAPYQHLADTLEALIGTTKRLRKADILVNCFRSLLALSPGDVVPALYLCSNSVG------ELGVGGSMVSAAVQQATGATRAQLHGLYRIKGDLGDAAFALKSNVRLMIEPKRLTIGGVYDSLTKLSRLAGQGSEKRKKDLMAHMIQAAKGVEVRFVVRTLLQHIRTGATLVSVLAALAMAVSIHEAAYGPLRVGASAAGAAXXXXXXXXXXXXXXXXXXXDNGGXXXXXXXXXXXXXXXXDGGGSRGMMADLNADGAGGPQFPAPAAAAAPLTPPDGRRVTERSVAARVADAQAKVKRAFDLCPHLGELATALLQGGVGALEEACQMRVGMPITPMLSNPSTSVCDLFKKLGGRECLVEYKYDGERSQIHLLEDGDVRIFSRNLDNTTGRYQDVARLIPAVKTAGVSNFIIDAELVACDPAQDYKILPFQMLSTRSRATTSTTVAV-------CAFVFDLMCLNGLDLTGEPLSERRRLLQESFAPQR-GKFEFATATVVPGLIAAARAAATTQRGQEAAMAAFMRAGALMQPSPPTAEPENILEEGEDCSEEAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVTAESDGAQCGSGNCGGHGIAELVEAAEMVGVAMADALQNSCEGVMAKALAVGSEYTAGRHSESWVKLKKDYVEGLGDSFDLVPIGAWWGNGRKAGWYSPVLLACYDPETEDLQ 3063
            +Y+P+  A WR+ +PAPY HLA T + +     +++   +L N FRSLLALSP DV+PA+YLC+N +       EL +GGS+V++A+++A G  R+++  +Y   GDLGD A A +    L+  P+ L I  VY  L K+S   G GS  RKK+L+ ++I++ +  E++F+VRTL++++R GA + +VL ALA AV ++                                                            SR +  +  AD                             +  ++ +    V  A+++ P+L  L  +L++ G+        M  G+PI PML+  +  V ++ K    +    EYKYDG+R QIH L +G VR+FSRN D TT R+ D+   I          FI+DAE+VA D     K++ FQ LS+R R +  + + V       C FVFD+M  NG  L G PL +RR+ L++ F  ++ G FE+A                                             E I+E  + C                                              +T+E+   Q          I+  +E          DALQ SCEG+M KAL + + Y   + S++W+K+K+DYVEGL DS DLVPIGAW GNGRKAGWYSP L+ACY+P+TED Q
Sbjct:  764 KYKPIEHACWRSDQPAPYVHLARTFDLVGSQRGKIKATSMLCNMFRSLLALSPEDVLPAVYLCTNKIAADHENIELNIGGSLVTSALEEACGTNRSKIRDMYNDMGDLGDVAQACRQTQTLLAPPRPLLIRDVYSVLRKISVQTGSGSTMRKKNLIVNLIRSCREKEMKFLVRTLVRNLRIGAMMKTVLPALAQAVVMNS-----------------------------------------------------------SRALCHEGTAD----------------------------CLKEKLQELSTAVTEAYNVLPNLDLLVPSLMKEGIAFSSSTLSMVPGIPIKPMLAKITNGVPEVLKLFQNKAFTCEYKYDGQRVQIHKLANGAVRVFSRNGDETTLRFPDLINTIKESAKPAAQTFILDAEVVAIDRKNGQKLMSFQELSSRERGSKDSLITVDKIKVNICVFVFDIMFANGQQLLGVPLRQRRKCLKDLFHDEKLGYFEYAK--------------------------------------------EIIVEADDAC----------------------------------------------LTSEATFTQ----------ISSFLE----------DALQFSCEGIMVKALDIDAGYLLSKRSDTWLKVKRDYVEGLSDSLDLVPIGAWHGNGRKAGWYSPFLMACYNPDTEDFQ 1291          
BLAST of mRNA_P-wetherbeei_contig2001.1.9 vs. uniprot
Match: A0A1B6Q5I4_SORBI (DNA ligase n=7 Tax=Andropogoneae TaxID=147429 RepID=A0A1B6Q5I4_SORBI)

HSP 1 Score: 322 bits (824), Expect = 1.040e-88
Identity = 223/725 (30.76%), Postives = 333/725 (45.93%), Query Frame = 1
Query:  928 QQYRPVSDAPWRAGEPAPYQHLADTLEALIGTTKRLRKADILVNCFRSLLALSPGDVVPALYLCSNSVG------ELGVGGSMVSAAVQQATGATRAQLHGLYRIKGDLGDAAFALKSNVRLMIEPKRLTIGGVYDSLTKLSRLAGQGSEKRKKDLMAHMIQAAKGVEVRFVVRTLLQHIRTGATLVSVLAALAMAVSIHEAAYGPLRVGASAAGAAXXXXXXXXXXXXXXXXXXXDNGGXXXXXXXXXXXXXXXXDGGGSRGMMADLNADGAGGPQFPAPAAAAAPLTPPDGRRVTERSVAARVADAQAKVKRAFDLCPHLGELATALLQGGVGALEEACQMRVGMPITPMLSNPSTSVCDLFKKLGGRECLVEYKYDGERSQIHLLEDGDVRIFSRNLDNTTGRYQDVARLIPAVKTAGVSNFIIDAELVACDPAQDYKILPFQMLSTRSRATTSTTVAV-------CAFVFDLMCLNGLDLTGEPLSERRRLLQESFAPQRGKFEFATATVVPGLIAAARAAATTQRGQEAAMAAFMRAGALMQPSPPTAEPENILEEGEDCSEEAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVTAESDGAQCGSGNCGGHGIAELVEAAEMVGVAMADALQNSCEGVMAKALAVGSEYTAGRHSESWVKLKKDYVEGLGDSFDLVPIGAWWGNGRKAGWYSPVLLACYDPETEDLQ 3063
            ++Y P+  A W AG+PAPY HLA T + +     +++   I  N FRSLLALSP DV+PA+YLC+N +       EL +GGS+V   ++++ G +R+++H +Y+  GDLG  A   + N  L+  P+ L+I  VY +L KLS ++G GS  R+K L+ H+I++ +  E++F+VRTL++++R GA + ++L ALA AV                                                                   + D N              AA P+   +G +   +S++  VA+A       +++ P+L  L  +LL+ G      +  M  G PI PML+  +  +    K   GR    EYKYDG+R+QIH L DG VRIFSR +  +T R+ D+  +I  +    VS+FI+DAE+V  D  +  K++ FQ LS+R R    +++++       C FVFD+M   G  L   PL +RR+ + + F  + G FE A    V    A+   ++T  R     M  F +                                                                                                         +A Q+SCEG+M K L V + Y+A +  +SW+K+K+DYVEGLGDS DLVPIGAW+GNGRKAGWYSP L+ACY+PETE+ Q
Sbjct:  754 EKYLPIEHACWTAGQPAPYLHLARTFDLVEKEKGKIKTTAIFCNMFRSLLALSPDDVLPAVYLCTNKISPDHENMELNIGGSLVVTTLEESLGTSRSKIHEMYKTYGDLGTVAQECRQNQTLLAPPRPLSIRDVYSTLRKLSAISGSGSAGRRKILVLHLIRSCRETEMKFLVRTLVRNLRIGAMMKTILPALAHAV-------------------------------------------------------------------VFDRNC-------------AADPVVSLEGIKSQLQSLSTEVAEA-------YNVIPNLDLLIPSLLREGTAFSASSLAMVPGTPIPPMLARITNGLTQSLKAFHGRSFTCEYKYDGQRAQIHKLPDGSVRIFSRQMKESTSRFPDLVNMIKELCKPEVSSFILDAEVVGIDRKKGNKLMSFQELSSRERGNKHSSISIENIKVDICVFVFDIMFHGGERLLDCPLRQRRKYIHDLFQEKPGYFELAQQLTVEACEASPDNSSTLAR-----MNTFFK---------------------------------------------------------------------------------------------------------NACQSSCEGIMLKTLDVDAGYSASKRCDSWLKVKRDYVEGLGDSLDLVPIGAWYGNGRKAGWYSPFLMACYNPETEEFQ 1281          
BLAST of mRNA_P-wetherbeei_contig2001.1.9 vs. uniprot
Match: A0A445FZ79_GLYSO (DNA ligase n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445FZ79_GLYSO)

HSP 1 Score: 307 bits (786), Expect = 2.780e-88
Identity = 216/716 (30.17%), Postives = 317/716 (44.27%), Query Frame = 1
Query:  958 WRAGEPAPYQHLADTLEALIGTTKRLRKADILVNCFRSLLALSPGDVVPALYLCSNSVG------ELGVGGSMVSAAVQQATGATRAQLHGLYRIKGDLGDAAFALKSNVRLMIEPKRLTIGGVYDSLTKLSRLAGQGSEKRKKDLMAHMIQAAKGVEVRFVVRTLLQHIRTGATLVSVLAALAMAVSIHEAAYGPLRVGASAAGAAXXXXXXXXXXXXXXXXXXXDNGGXXXXXXXXXXXXXXXXDGGGSRGMMADLNADGAGGPQFPAPAAAAAPLTPPDGRRVTERSVAARVADAQAKVKRAFDLCPHLGELATALLQGGVGALEEACQMRVGMPITPMLSNPSTSVCDLFKKLGGRECLVEYKYDGERSQIHLLEDGDVRIFSRNLDNTTGRYQDVARLIPAVKTAGVSNFIIDAELVACDPAQDYKILPFQMLSTRSRATTSTTVA-------VCAFVFDLMCLNGLDLTGEPLSERRRLLQESFAPQR-GKFEFATATVVPGLIAAARAAATTQRGQEAAMAAFMRAGALMQPSPPTAEPENILEEGEDCSEEAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVTAESDGAQCGSGNCGGHGIAELVEAAEMVGVAMADALQNSCEGVMAKALAVGSEYTAGRHSESWVKLKKDYVEGLGDSFDLVPIGAWWGNGRKAGWYSPVLLACYDPETEDLQ 3063
            WR G+PAPY H+A T   L G   R++   +L N FRSLLALSP DV+PA+YLC+N +       EL +GGS+V+AA+++A G  R ++  ++   GDLGD A   +   RL+  P  L I  V+ +L K+S   G  S  RKK ++ H++++ +  E++F+VRTL++++R GA L +VL ALA AV+++                                                                   L+ +G                        T  ++  ++      V  A+++ P+L  +  +L+  G+     +  M  G+PI PML+  +  +    K    +    EYKYDG+R+QIH L DG +R+FSRN D +T R+ D+  +I        S FI+DAE+V  D    Y+I+ FQ LS+R R    T V        +C FVFD+M  NG  L G PL  RR+ L++ F  ++ G FE+A  T V    A     AT  +     + AF+                                                                                                          DAL++SCEG+M K L V + Y+  + S+ W+K+K+DYVEGL D+ DLVPIGAW GNGRKAGWYSP L+AC++PETE+ Q
Sbjct:   33 WRDGQPAPYLHIARTFNLLEGEKGRIKATSLLCNMFRSLLALSPADVLPAVYLCTNKIAADHENKELNIGGSLVTAALEEACGTNRLKIREMFNKFGDLGDVAQECRQTQRLLAPPTPLLIKDVFSALQKISVQTGSRSTSRKKGIIVHLMRSCREKEMKFLVRTLVRNLRIGAMLRTVLPALAHAVAMNS---------------------------------------------------------------CPTLHQEG------------------------TAENIKEKLQVLSMAVVEAYNILPNLDLIVPSLMNQGIDFSVSSLSMVPGIPIKPMLAKITNGIPQALKLFENKAFTCEYKYDGQRAQIHKLVDGSIRVFSRNGDESTSRFPDLIDIIKESSKPVASTFIMDAEIVGIDRKNGYRIMSFQELSSRGRGGKDTLVTSESIKVDICIFVFDIMFANGEQLLGFPLRLRRKYLKDLFYDEKPGYFEYAKETTVEADDACLTCEATLTK-----INAFLE---------------------------------------------------------------------------------------------------------DALRSSCEGIMVKTLDVDAGYSPSKRSDKWLKVKRDYVEGLNDTLDLVPIGAWHGNGRKAGWYSPFLMACFNPETEEYQ 551          
BLAST of mRNA_P-wetherbeei_contig2001.1.9 vs. uniprot
Match: UPI001C4E739D (DNA ligase 6 isoform X1 n=5 Tax=Macadamia integrifolia TaxID=60698 RepID=UPI001C4E739D)

HSP 1 Score: 320 bits (821), Expect = 3.300e-88
Identity = 233/732 (31.83%), Postives = 331/732 (45.22%), Query Frame = 1
Query:  928 QQYRPVSDAPWRAGEPAPYQHLADTLEALIGTTKRLRKADILVNCFRSLLALSPGDVVPALYLCSNSVG------ELGVGGSMVSAAVQQATGATRAQLHGLYRIKGDLGDAAFALKSNVRLMIEPKRLTIGGVYDSLTKLSRLAGQGSEKRKKDLMAHMIQAAKGVEVRFVVRTLLQHIRTGATLVSVLAALAMAV------SIHEAAYGPLRVGASAAGAAXXXXXXXXXXXXXXXXXXXDNGGXXXXXXXXXXXXXXXXDGGGSRGMMADLNADGAGGPQFPAPAAAAAPLTPPDGRRVTERSVAARVADAQAKVKRAFDLCPHLGELATALLQGGVGALEEACQMRVGMPITPMLSNPSTSVCDLFKKLGGRECLVEYKYDGERSQIHLLEDGDVRIFSRNLDNTTGRYQDVARLIPAVKTAGVSNFIIDAELVACDPAQDYKILPFQMLSTRSRATT-------STTVAVCAFVFDLMCLNGLDLTGEPLSERRRLLQESFAPQR-GKFEFATATVVPGLIAAARAAATTQRGQEAAMAAFMRAGALMQPSPPTAEPENILEEGEDCSEEAEAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIVTAESDGAQCGSGNCGGHGIAELVEAAEMVGVAMADALQNSCEGVMAKALAVGSEYTAGRHSESWVKLKKDYVEGLGDSFDLVPIGAWWGNGRKAGWYSPVLLACYDPETEDLQ 3063
            ++Y PV  A W +G+ APY HLA T + + G   +++   IL N FRSLLALSP DV+PA+YLC+N +       EL +GGS+V+AA+++A G  R+++  +Y   GDLGD A   +     +  P  L+I  V+ SL K+S   G GS  RKK L+ +++ + +  E++F+VRTL++++R GA + SVL ALA AV      ++HE A   L+                                                                   P+                     +S++A V +A       F++ P+L  L  +L+  GV        M  G+PI PML+  +  V  + K   GR    EYKYDG+R+QIH L DG VR+FSRN D TT R+ D+  +I          FI+DAE+VA D     K++ FQ LS+R R +        S  V VC FVFD+M  NG  L   PL +RRR L++ F  Q+ G FE+A                                             + I+ E ED                                               V++++   +  S                     + DA+ +SCEG+M K L V + Y A + S++W+K+K+DYVEGL DS DLVPIGAW GNGRKAGWYSP L+ACY+PETE+ Q
Sbjct:  794 EKYFPVEHACWSSGQAAPYLHLARTFDLVEGERGKIKAIGILCNMFRSLLALSPEDVLPAIYLCTNKIAADYEKMELNIGGSLVTAALEEACGTNRSKIKEMYNKMGDLGDVAQVCRQTQSFLAPPCPLSIRDVFSSLQKISAEIGSGSTTRKKMLIVNLMHSCREKEIKFLVRTLVRNLRIGAMMKSVLPALAQAVVMNSNNALHEGALENLK-------------------------------------------------------------------PKL--------------------QSISAAVVEA-------FNILPNLDLLVPSLMNKGVEFSSTTLSMVPGIPIRPMLARITNGVPQVLKMFQGRAFTCEYKYDGQRAQIHRLTDGSVRVFSRNGDETTSRFPDLVNIIKESCKPDAVTFILDAEVVAVDRRNGCKLMSFQELSSRERGSKDSLVMVDSIKVDVCVFVFDIMFANGEQLLVVPLRQRRRYLKDLFLEQKLGYFEYA---------------------------------------------KEIIVEAEDA---------------------------------------------CVSSQTSLTRINS--------------------FLKDAISSSCEGIMVKCLDVEAGYAASKRSDTWLKVKRDYVEGLNDSLDLVPIGAWHGNGRKAGWYSPFLMACYNPETEEFQ 1321          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig2001.1.9 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835Z5S6_9STRA5.010e-11436.43DNA ligase n=1 Tax=Tribonema minus TaxID=303371 Re... [more]
A0A1Y1IJ60_KLENI1.630e-9432.69DNA ligase n=1 Tax=Klebsormidium nitens TaxID=1052... [more]
A0A3B6FT20_WHEAT5.140e-9229.68DNA ligase n=5 Tax=Triticum TaxID=4564 RepID=A0A3B... [more]
A0A3B6GVB5_WHEAT1.110e-9029.89DNA ligase n=15 Tax=Triticinae TaxID=1648030 RepID... [more]
A0A176VVZ8_MARPO1.440e-9033.06DNA ligase n=3 Tax=Marchantia polymorpha TaxID=319... [more]
A0A3B6EHL6_WHEAT6.530e-9029.75DNA ligase n=18 Tax=Triticeae TaxID=147389 RepID=A... [more]
A0A1U8K7F8_GOSHI3.240e-8931.03DNA ligase n=22 Tax=Gossypium TaxID=3633 RepID=A0A... [more]
A0A1B6Q5I4_SORBI1.040e-8830.76DNA ligase n=7 Tax=Andropogoneae TaxID=147429 RepI... [more]
A0A445FZ79_GLYSO2.780e-8830.17DNA ligase n=1 Tax=Glycine soja TaxID=3848 RepID=A... [more]
UPI001C4E739D3.300e-8831.83DNA ligase 6 isoform X1 n=5 Tax=Macadamia integrif... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig2001contigP-wetherbeei_contig2001:52..4247 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog29730.Gorai.007G185500.1
PFAMsDNA_ligase_A_C,DNA_ligase_A_M,DNA_ligase_A_N,DRMBL
Model size3069
Max annot lvl35493|Streptophyta
KEGG rclassRC00005
KEGG koko:K10747
KEGG ReactionR00381,R00382,R10822,R10823
KEGG Pathwayko03030,ko03410,ko03420,ko03430,map03030,map03410,map03420,map03430
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000012,GO:0000726,GO:0002237,GO:0003006,GO:0003674,GO:0003824,GO:0003909,GO:0003910,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005739,GO:0006139,GO:0006259,GO:0006260,GO:0006261,GO:0006266,GO:0006271,GO:0006273,GO:0006281,GO:0006302,GO:0006303,GO:0006304,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006979,GO:0007275,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009266,GO:0009314,GO:0009409,GO:0009411,GO:0009416,GO:0009605,GO:0009607,GO:0009617,GO:0009628,GO:0009791,GO:0009845,GO:0009987,GO:0010033,GO:0010154,GO:0010225,GO:0010243,GO:0015074,GO:0016070,GO:0016874,GO:0016886,GO:0022414,GO:0022616,GO:0031974,GO:0031981,GO:0032501,GO:0032502,GO:0033554,GO:0034641,GO:0034645,GO:0035510,GO:0042221,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0044728,GO:0046483,GO:0046677,GO:0048316,GO:0048518,GO:0048522,GO:0048583,GO:0048584,GO:0048608,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051103,GO:0051704,GO:0051707,GO:0051716,GO:0061458,GO:0065007,GO:0070013,GO:0070988,GO:0071704,GO:0080111,GO:0090304,GO:0090351,GO:0140097,GO:1901360,GO:1901576,GO:1901652,GO:1901698,GO:1901700,GO:1904975,GO:2000683,GO:2000685
Exons6
Evalue4.4e-89
EggNOG OGsCOG1236@1|root,COG1793@1|root,KOG0967@2759|Eukaryota,KOG1361@2759|Eukaryota,37NHP@33090|Viridiplantae,3GCHH@35493|Streptophyta
EC6.5.1.1,6.5.1.6,6.5.1.7
DescriptionDNA ligase
Cds size2910
COG categoryL
BRITEko00000,ko00001,ko01000,ko03032,ko03400
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig2001.1.9prot_P-wetherbeei_contig2001.1.9Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig2001 52..4088 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186188.409299-CDS-P-wetherbeei_contig2001:51..1401683186188.409299-CDS-P-wetherbeei_contig2001:51..140Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2001 52..140 -
1683186188.4213552-CDS-P-wetherbeei_contig2001:309..10661683186188.4213552-CDS-P-wetherbeei_contig2001:309..1066Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2001 310..1066 -
1683186188.4298196-CDS-P-wetherbeei_contig2001:1269..14311683186188.4298196-CDS-P-wetherbeei_contig2001:1269..1431Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2001 1270..1431 -
1683186188.4390194-CDS-P-wetherbeei_contig2001:1745..25351683186188.4390194-CDS-P-wetherbeei_contig2001:1745..2535Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2001 1746..2535 -
1683186188.448444-CDS-P-wetherbeei_contig2001:2833..38151683186188.448444-CDS-P-wetherbeei_contig2001:2833..3815Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2001 2834..3815 -
1683186188.4581914-CDS-P-wetherbeei_contig2001:3958..40881683186188.4581914-CDS-P-wetherbeei_contig2001:3958..4088Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig2001 3959..4088 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186188.467515-UTR-P-wetherbeei_contig2001:4088..42471683186188.467515-UTR-P-wetherbeei_contig2001:4088..4247Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig2001 4089..4247 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig2001.1.9

>prot_P-wetherbeei_contig2001.1.9 ID=prot_P-wetherbeei_contig2001.1.9|Name=mRNA_P-wetherbeei_contig2001.1.9|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=970bp
MSCLSDASSDETREPAELSTLLHISEARAAELFKSSGSVAAAVELHFSRQ
EPPSSETATQSAAAGGTAATTSSSSSSASSGRKAASSKRAAPKVSPRGGK
GKGKQSFLAPPTQRLTHFFKAGDAALPLKRRGNDSERAAAEAASTPALKM
VDADAGNSDGAVSAVAAAAAAKRQKLPEDRNGNGVSSVATPIKAGGGGSS
GFTTPGGGNGNESSSGSGRPSFGSPTSLPGTPFSPAGALTPREGGGSGCP
GVDQQWQQYRPVSDAPWRAGEPAPYQHLADTLEALIGTTKRLRKADILVN
CFRSLLALSPGDVVPALYLCSNSVGELGVGGSMVSAAVQQATGATRAQLH
GLYRIKGDLGDAAFALKSNVRLMIEPKRLTIGGVYDSLTKLSRLAGQGSE
KRKKDLMAHMIQAAKGVEVRFVVRTLLQHIRTGATLVSVLAALAMAVSIH
EAAYGPLRVGASAAGAAGAGIRGSSHGGADGSSAGGDNGGGGSSGDSGGW
CNGDEGDGGGSRGMMADLNADGAGGPQFPAPAAAAAPLTPPDGRRVTERS
VAARVADAQAKVKRAFDLCPHLGELATALLQGGVGALEEACQMRVGMPIT
PMLSNPSTSVCDLFKKLGGRECLVEYKYDGERSQIHLLEDGDVRIFSRNL
DNTTGRYQDVARLIPAVKTAGVSNFIIDAELVACDPAQDYKILPFQMLST
RSRATTSTTVAVCAFVFDLMCLNGLDLTGEPLSERRRLLQESFAPQRGKF
EFATATVVPGLIAAARAAATTQRGQEAAMAAFMRAGALMQPSPPTAEPEN
ILEEGEDCSEEAEAAVPAATGATAAAVAGSAASALSAAAGGGGDDAAAAA
VAAIVTAESDGAQCGSGNCGGHGIAELVEAAEMVGVAMADALQNSCEGVM
AKALAVGSEYTAGRHSESWVKLKKDYVEGLGDSFDLVPIGAWWGNGRKAG
WYSPVLLACYDPETEDLQR*
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mRNA from alignment at P-wetherbeei_contig2001:52..4247-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig2001.1.9 ID=mRNA_P-wetherbeei_contig2001.1.9|Name=mRNA_P-wetherbeei_contig2001.1.9|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=4196bp|location=Sequence derived from alignment at P-wetherbeei_contig2001:52..4247- (Phaeothamnion wetherbeei SAG_119_79)
TACTTAACAGCATAAGTCCCCTAGAAAGAACCGTTTTGTAACAAGCGCAC CGAGAAGAGACCGTGAGAGATATCGCATTCGGAGGTGAATTCTCTCGGGA CAGCGGTCGTTACAAGTCTGCGCCCAGTTCTGGAACTCGAAAAGAGGAGG AAAGATAACATGTCGTGTTTGTCAGATGCTTCTTCAGACGAAACGCGCGA GCCTGCTGAACTTTCAACTCTCCTTCACATCAGCGAGGCTCGGGCAGCCG AGTTATTTAAGTCCTCGGGAAGCGTTGCCGCCGCCGTTGGTGAGGTGTCA AAAAGTTGTCCATCTTGCTTTTGAGTTAATGTGTCGAACTTTGATGGAGG GAATGCTGTTTTCTTCTCGATTTCGAATCGATTTGATGGTCACAATCGCT CATGAGAAAGGTCACCGTCTGAATGCCGGCAGAGCTTCATTTCTCTCGGC AAGAGCCTCCAAGCAGCGAAACAGCGACGCAATCTGCAGCGGCCGGCGGG ACTGCTGCCACCACGAGCAGCAGCAGCAGCAGCGCGAGCAGCGGCCGGAA AGCTGCGAGCAGCAAGAGAGCTGCTCCAAAAGTGAGCCCCCGCGGTGGGA AGGGCAAAGGGAAGCAGAGCTTCCTTGCGCCACCCACGCAGCGGCTGACC CACTTCTTCAAGGCTGGTGACGCCGCCCTCCCTCTGAAGCGCCGCGGCAA CGACTCCGAAAGAGCTGCTGCAGAGGCAGCTTCGACACCGGCGCTAAAGA TGGTGGATGCTGATGCTGGAAACTCTGACGGCGCAGTCAGCGCGGTTGCG GCCGCAGCGGCAGCGAAGCGACAAAAGTTGCCGGAAGACAGAAACGGCAA CGGCGTTAGCAGTGTTGCTACTCCCATAAAAGCCGGCGGCGGAGGCAGCA GCGGCTTCACCACTCCCGGTGGCGGCAACGGCAACGAAAGCAGCAGCGGC AGCGGTAGGCCCAGCTTTGGCAGCCCCACCAGCCTCCCCGGTACTCCATT CAGCCCTGCCGGCGCTCTCACCCCCCGGGAGGGCGGCGGCAGCGGCTGTC CCGGCGTGGACCAGCAGTGGCAGCAATACCGACCCGTATCAGACGCGCCC TGGCGCGCCGGGGAGCCTGCGCCATACCAGCACCTCGCCGACACGCTCGA GGCGCTCATCGGCACCACGAAGCGCCTCCGGAAGGCCGACATCCTCGTCA ACTGCTTTCGCAGCCTGCTTGCCCTCAGCCCTGGCGACGTCGTGCCGGCG CTTTACCTCTGCTCCAACAGCGTCGGGGAGCTAGGGGTGGGCGGTTCGAT GGTCAGCGCGGCGGTGCAACAGGCGACGGGCGCCACGCGGGCGCAGCTGC ACGGTCTCTACCGGATCAAGGGTGACCTTGGTGACGCGGCGTTTGCGCTC AAGTCGAACGTGCGGTGCGTTCCTTGAGCGGATGAGACGTTAGCAGAAGG CAAAATAACTTTTTTTTGACGCGACTGGTTTCGTTCTCCCGCCTCCCTCT TTTGTCAGCTGTTTATCTGCGGTTGTTAGCAATGCTGCAGGTGTTCCCGT CGGCATAATCTCTATCCGTCTGCCGTTGCGACCACCGAAGCTGCTGCTGC TGCTACTGCTAACGGCTTAGCGACCATGAGCATCGCTGCCGCCGCCGCGG CCGTCGTTTCTTTCTTCGTCATTCTCTGCCGCCGTCTCCTCCTCCCACTC CACGCTCGTCAGACTGATGATCGAGCCGAAGCGACTGACGATCGGCGGCG TGTACGATTCCCTCACTAAGCTGTCGCGCCTCGCGGGGCAGGGCTCGGAG AAGCGCAAGAAGGACCTGATGGCTCACATGATTCAGGCCGCCAAAGGCGT CGAGGTCCGCTTTGTTGTGCGGACGTTGCTGCAGCACATCCGGACGGGGG CGACGCTCGTCAGCGTGTTGGCGGCGCTCGCCATGGCGGTGTCGATTCAT GAGGCTGCGTACGGTCCGCTCAGGGTGGGCGCTTCTGCTGCTGGCGCTGC TGGAGCCGGCATAAGAGGCAGCAGTCATGGCGGCGCTGATGGTAGCAGTG CTGGTGGTGACAACGGCGGCGGCGGCAGCAGCGGCGACAGCGGCGGCTGG TGCAACGGCGACGAAGGCGACGGTGGCGGCAGCAGAGGCATGATGGCCGA CCTAAATGCCGACGGAGCAGGTGGCCCGCAATTCCCAGCTCCGGCCGCAG CCGCCGCGCCTCTGACGCCGCCCGACGGACGGCGCGTGACGGAGCGAAGC GTCGCCGCGCGCGTCGCCGACGCCCAGGCCAAGGTCAAGCGGGCTTTTGA CCTCTGCCCCCACCTCGGCGAGCTGGCCACAGCGCTGCTGCAGGGCGGCG TCGGAGCTCTGGAGGAGGCCTGCCAGATGCGGGTGGGGATGCCAATCACG CCAATGCTGTCGAATCCGTCGACATCCGTGTGCGACCTCTTCAAGAAGCT CGGCGGGCGCGAGTGCCTCGTCGAGTACAAATACGACGGCGAGCGGTCGC AGGCAAGTCCGCCCCCAGAGCTCAACCGATTGGGCTGAGGAGCGTGGAAG AGTTGAATAGAGAAACCGCGTGGAGTTCCTTTGCAAGTTGTTTCTGTAGT TGCCGCGTTCGATTCTTCTTGTGAAACCTTTTCAAGTCCAAGCCCGTTTC ATGACATTTCTACGCCCTCGCTGAGGAGCGTGGAAAAGTTGAACAGAGAA ACCGCGTGGACTTCCTTTGCAAGCTGTTTCTGTAGTTGCCGCCTTCGGTT CTTCTTGTGAAACCTTTCAAGTCCAAGCCCGTTTCATGACATTTCTACGC CCTCACTGGCTGGCAGATCCACCTGCTGGAGGATGGCGACGTGCGAATTT TCTCACGGAACCTCGACAACACGACGGGGCGGTATCAAGATGTGGCCCGC TTGATACCGGCGGTGAAGACGGCAGGTGTCAGTAACTTCATTATCGACGC CGAGCTCGTGGCATGTGATCCTGCTCAGGTGTGGGATATGGCTGGAGGCG GTTTCCCGTAAGCGTTTCCCGGTCTCGGCATATGGAGAAAGAAATGGCGT TGCTGTGCAAGGAGGTATCTGCCATTTGGTAACCCCTTCTTCGTTGCGTT GTTGCCCGTGCGCCGGCGCATACTGGCGGTTGCCGCTACCCGCCCGCCTG TCTTCTCAACCTTTCACTGCTTTTTACACAGGACTACAAGATTCTGCCGT TCCAGATGCTGTCAACGCGCAGCCGTGCCACAACGTCGACCACCGTGGCC GTTTGCGCCTTCGTCTTCGACTTGATGTGCTTGAACGGCCTCGACCTGAC GGGCGAGCCGCTGTCGGAGCGGCGTCGGCTGCTGCAGGAGTCCTTTGCAC CGCAGCGGGGCAAGTTCGAGTTTGCTACTGCGACGGTGGTGCCGGGGCTG ATTGCGGCGGCGAGGGCGGCGGCGACGACGCAGCGCGGTCAGGAGGCCGC GATGGCGGCCTTCATGCGGGCTGGGGCCCTGATGCAGCCTTCGCCGCCAA CGGCCGAGCCTGAGAATATTTTGGAAGAGGGCGAGGATTGTTCCGAGGAA GCAGAAGCGGCGGTGCCGGCGGCGACAGGAGCGACGGCGGCGGCAGTGGC AGGGTCTGCTGCAAGCGCGCTGTCGGCAGCTGCTGGAGGCGGTGGAGATG ACGCAGCCGCCGCCGCCGTCGCTGCCATCGTCACCGCCGAGAGCGACGGC GCTCAATGCGGCAGCGGCAACTGCGGCGGGCATGGCATCGCGGAACTGGT CGAGGCGGCGGAGATGGTCGGCGTGGCCATGGCAGATGCCCTCCAAAATT CGTGCGAGGGTGTCATGGCCAAGGCGCTGGCTGTCGGCAGTGAGTACACA GCGGGCCGCCACTCCGAGTCGTGGGTCAAGCTGAAGAAGGATTACGTGGA GGGCCTCGGCGACTCGTTCGACCTCGTTCCCATCGGAGGTGGGAGGCTGG CTGGCTGGCTGCTGCGAGAGCGTTTTGGCTGATGCATCGTTCGTCCTGAT TCACTCATGTCGACATCAGACTCCGCCTGCCTCATACTGCTCCGGCTCAG CGTTTCGACGCGTTCCCGCTGTTTTTCTCCGCCCGCGCGGCTTCTTATCC TTGGCAGCATGGTGGGGCAACGGACGAAAGGCGGGTTGGTACTCCCCGGT GCTCCTGGCATGCTACGACCCAGAGACGGAAGATCTTCAGAGGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig2001:52..4247-

>mRNA_P-wetherbeei_contig2001.1.9 ID=mRNA_P-wetherbeei_contig2001.1.9|Name=mRNA_P-wetherbeei_contig2001.1.9|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=2910bp|location=Sequence derived from alignment at P-wetherbeei_contig2001:52..4247- (Phaeothamnion wetherbeei SAG_119_79)
ATGTCGTGTTTGTCAGATGCTTCTTCAGACGAAACGCGCGAGCCTGCTGA
ACTTTCAACTCTCCTTCACATCAGCGAGGCTCGGGCAGCCGAGTTATTTA
AGTCCTCGGGAAGCGTTGCCGCCGCCGTTGAGCTTCATTTCTCTCGGCAA
GAGCCTCCAAGCAGCGAAACAGCGACGCAATCTGCAGCGGCCGGCGGGAC
TGCTGCCACCACGAGCAGCAGCAGCAGCAGCGCGAGCAGCGGCCGGAAAG
CTGCGAGCAGCAAGAGAGCTGCTCCAAAAGTGAGCCCCCGCGGTGGGAAG
GGCAAAGGGAAGCAGAGCTTCCTTGCGCCACCCACGCAGCGGCTGACCCA
CTTCTTCAAGGCTGGTGACGCCGCCCTCCCTCTGAAGCGCCGCGGCAACG
ACTCCGAAAGAGCTGCTGCAGAGGCAGCTTCGACACCGGCGCTAAAGATG
GTGGATGCTGATGCTGGAAACTCTGACGGCGCAGTCAGCGCGGTTGCGGC
CGCAGCGGCAGCGAAGCGACAAAAGTTGCCGGAAGACAGAAACGGCAACG
GCGTTAGCAGTGTTGCTACTCCCATAAAAGCCGGCGGCGGAGGCAGCAGC
GGCTTCACCACTCCCGGTGGCGGCAACGGCAACGAAAGCAGCAGCGGCAG
CGGTAGGCCCAGCTTTGGCAGCCCCACCAGCCTCCCCGGTACTCCATTCA
GCCCTGCCGGCGCTCTCACCCCCCGGGAGGGCGGCGGCAGCGGCTGTCCC
GGCGTGGACCAGCAGTGGCAGCAATACCGACCCGTATCAGACGCGCCCTG
GCGCGCCGGGGAGCCTGCGCCATACCAGCACCTCGCCGACACGCTCGAGG
CGCTCATCGGCACCACGAAGCGCCTCCGGAAGGCCGACATCCTCGTCAAC
TGCTTTCGCAGCCTGCTTGCCCTCAGCCCTGGCGACGTCGTGCCGGCGCT
TTACCTCTGCTCCAACAGCGTCGGGGAGCTAGGGGTGGGCGGTTCGATGG
TCAGCGCGGCGGTGCAACAGGCGACGGGCGCCACGCGGGCGCAGCTGCAC
GGTCTCTACCGGATCAAGGGTGACCTTGGTGACGCGGCGTTTGCGCTCAA
GTCGAACGTGCGACTGATGATCGAGCCGAAGCGACTGACGATCGGCGGCG
TGTACGATTCCCTCACTAAGCTGTCGCGCCTCGCGGGGCAGGGCTCGGAG
AAGCGCAAGAAGGACCTGATGGCTCACATGATTCAGGCCGCCAAAGGCGT
CGAGGTCCGCTTTGTTGTGCGGACGTTGCTGCAGCACATCCGGACGGGGG
CGACGCTCGTCAGCGTGTTGGCGGCGCTCGCCATGGCGGTGTCGATTCAT
GAGGCTGCGTACGGTCCGCTCAGGGTGGGCGCTTCTGCTGCTGGCGCTGC
TGGAGCCGGCATAAGAGGCAGCAGTCATGGCGGCGCTGATGGTAGCAGTG
CTGGTGGTGACAACGGCGGCGGCGGCAGCAGCGGCGACAGCGGCGGCTGG
TGCAACGGCGACGAAGGCGACGGTGGCGGCAGCAGAGGCATGATGGCCGA
CCTAAATGCCGACGGAGCAGGTGGCCCGCAATTCCCAGCTCCGGCCGCAG
CCGCCGCGCCTCTGACGCCGCCCGACGGACGGCGCGTGACGGAGCGAAGC
GTCGCCGCGCGCGTCGCCGACGCCCAGGCCAAGGTCAAGCGGGCTTTTGA
CCTCTGCCCCCACCTCGGCGAGCTGGCCACAGCGCTGCTGCAGGGCGGCG
TCGGAGCTCTGGAGGAGGCCTGCCAGATGCGGGTGGGGATGCCAATCACG
CCAATGCTGTCGAATCCGTCGACATCCGTGTGCGACCTCTTCAAGAAGCT
CGGCGGGCGCGAGTGCCTCGTCGAGTACAAATACGACGGCGAGCGGTCGC
AGATCCACCTGCTGGAGGATGGCGACGTGCGAATTTTCTCACGGAACCTC
GACAACACGACGGGGCGGTATCAAGATGTGGCCCGCTTGATACCGGCGGT
GAAGACGGCAGGTGTCAGTAACTTCATTATCGACGCCGAGCTCGTGGCAT
GTGATCCTGCTCAGGACTACAAGATTCTGCCGTTCCAGATGCTGTCAACG
CGCAGCCGTGCCACAACGTCGACCACCGTGGCCGTTTGCGCCTTCGTCTT
CGACTTGATGTGCTTGAACGGCCTCGACCTGACGGGCGAGCCGCTGTCGG
AGCGGCGTCGGCTGCTGCAGGAGTCCTTTGCACCGCAGCGGGGCAAGTTC
GAGTTTGCTACTGCGACGGTGGTGCCGGGGCTGATTGCGGCGGCGAGGGC
GGCGGCGACGACGCAGCGCGGTCAGGAGGCCGCGATGGCGGCCTTCATGC
GGGCTGGGGCCCTGATGCAGCCTTCGCCGCCAACGGCCGAGCCTGAGAAT
ATTTTGGAAGAGGGCGAGGATTGTTCCGAGGAAGCAGAAGCGGCGGTGCC
GGCGGCGACAGGAGCGACGGCGGCGGCAGTGGCAGGGTCTGCTGCAAGCG
CGCTGTCGGCAGCTGCTGGAGGCGGTGGAGATGACGCAGCCGCCGCCGCC
GTCGCTGCCATCGTCACCGCCGAGAGCGACGGCGCTCAATGCGGCAGCGG
CAACTGCGGCGGGCATGGCATCGCGGAACTGGTCGAGGCGGCGGAGATGG
TCGGCGTGGCCATGGCAGATGCCCTCCAAAATTCGTGCGAGGGTGTCATG
GCCAAGGCGCTGGCTGTCGGCAGTGAGTACACAGCGGGCCGCCACTCCGA
GTCGTGGGTCAAGCTGAAGAAGGATTACGTGGAGGGCCTCGGCGACTCGT
TCGACCTCGTTCCCATCGGAGCATGGTGGGGCAACGGACGAAAGGCGGGT
TGGTACTCCCCGGTGCTCCTGGCATGCTACGACCCAGAGACGGAAGATCT
TCAGAGGTGA
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