mRNA_P-wetherbeei_contig20.2.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig20.2.1
Unique NamemRNA_P-wetherbeei_contig20.2.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig20.2.1 vs. uniprot
Match: A0A836CJ98_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CJ98_9STRA)

HSP 1 Score: 488 bits (1257), Expect = 6.910e-170
Identity = 251/272 (92.28%), Postives = 262/272 (96.32%), Query Frame = 3 
Query:   93 AGPELIEDLFPLVLQLTNPDQREGALLELSKKRETFSDLAPILWHSFGTISALLQEIVAIYPMLSPPTLTPHASNRVCNALALLQCVASHPETRALFLNAHIPLYLYPFLNTVSKSRPFEYLRLTSLGVIGALVKMDDTDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQRILLDEMGLSYICATAERFYAVSTVLSNMVAVLVENPSVRLLKHIVRCYLRLSDNLRAREALRQCLPGDLRDSTFMAVLKDDVSVKRWLTQLLFNISE 908
            +G E IEDLFPLV QLTNP+QREGALLELSKKRE FSDLAPILWHSFGTISALLQEIVAIYPMLSPPTLTPHASNRVCNALALLQCVASHPETRA+FLNAHIPLYLYPFLNTVSKSRPFEYLRLTSLGVIGALVKMDD+DVI FLLQTEIIPLCLRIMETGSELSKTVATFIVQ+ILLDE+GL+YICATAERFYAVSTVLSNMVAVLVE PSVRLLKHIVRCYLRLSDNLRAREALRQCLP  LRD+TF + LKDDVSVKRWL+QLL+NISE
Sbjct:   19 SGLEHIEDLFPLVGQLTNPEQREGALLELSKKREAFSDLAPILWHSFGTISALLQEIVAIYPMLSPPTLTPHASNRVCNALALLQCVASHPETRAVFLNAHIPLYLYPFLNTVSKSRPFEYLRLTSLGVIGALVKMDDSDVITFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDELGLNYICATAERFYAVSTVLSNMVAVLVEAPSVRLLKHIVRCYLRLSDNLRAREALRQCLPDALRDATFASALKDDVSVKRWLSQLLYNISE 290
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BLAST of mRNA_P-wetherbeei_contig20.2.1 vs. uniprot
Match: A0A7S2V242_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V242_9STRA)

HSP 1 Score: 473 bits (1218), Expect = 7.470e-164
Identity = 241/282 (85.46%), Postives = 261/282 (92.55%), Query Frame = 3 
Query:   72 VVPAAGAAGPELIEDLFPLVLQLTNPDQREGALLELSKKRETFSDLAPILWHSFGTISALLQEIVAIYPMLSPPTLTPHASNRVCNALALLQCVASHPETRALFLNAHIPLYLYPFLNTVSKSRPFEYLRLTSLGVIGALVKMDDTDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQRILLDEMGLSYICATAERFYAVSTVLSNMVAVLVENPSVRLLKHIVRCYLRLSDNLRAREALRQCLPGDLRDSTFMAVLKDDVSVKRWLTQLLFNISENPG 917
            ++P +      +++DLFPLV+QLT+PDQRE ALLELSKKRE F+DLAPILWHSFGTISALLQEIVAIYP+LSPPTL+  ASNRVCNALALLQCVASH ETRALFLNAH+PLYLYPFLNTVSK+RPFEYLRLTSLGVIGALVKMDD+DVI+FLLQTEIIPLCLRIMETGSELSKTVATFIVQ+ILLDEMGL+YICATAERFYAVSTVLSNMVAVL E PSVRLLKHIVRCYLRLSDNLRAREALRQCLP  LRDSTF  VLKDDV+V+RWL QLLFNI+E  G
Sbjct:    7 LIPGSAQLSDPVLDDLFPLVVQLTDPDQRETALLELSKKREAFADLAPILWHSFGTISALLQEIVAIYPLLSPPTLSAQASNRVCNALALLQCVASHQETRALFLNAHVPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDSDVIHFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEMGLNYICATAERFYAVSTVLSNMVAVLAEAPSVRLLKHIVRCYLRLSDNLRAREALRQCLPEGLRDSTFTGVLKDDVTVRRWLAQLLFNINEGAG 288
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BLAST of mRNA_P-wetherbeei_contig20.2.1 vs. uniprot
Match: A0A7S2S6Y0_9STRA (Hypothetical protein n=2 Tax=Dictyochophyceae TaxID=39119 RepID=A0A7S2S6Y0_9STRA)

HSP 1 Score: 466 bits (1199), Expect = 3.210e-161
Identity = 238/265 (89.81%), Postives = 252/265 (95.09%), Query Frame = 3 
Query:  117 LFPLVLQLTNPDQREGALLELSKKRETFSDLAPILWHSFGTISALLQEIVAIYPMLSPPTLTPHASNRVCNALALLQCVASHPETRALFLNAHIPLYLYPFLNTVSKSRPFEYLRLTSLGVIGALVKMDDTDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQRILLDEMGLSYICATAERFYAVSTVLSNMVAVLVENPSVRLLKHIVRCYLRLSDNLRAREALRQCLPGDLRDSTFMAVLKDDVSVKRWLTQLLFNISEN 911
            LFPLVLQLTNP+QRE ALLELSKKRE FSDLAPILWHSFGTISALLQEI++IYPMLSPP L   ASNRVCNALALLQCVASHPETR+LFL+AHIPLYLYPFLNTVSK+RPFEYLRLTSLGVIGALVKMDD++VINFLLQTEIIPLCLRIMETGSELSKTVATFIVQ+ILLDEMGL+YICATAERFYAVSTVLSNMVAVLVE PSVRLLKHIVRCYLRLSDNLRAREALRQCLP  LRD+TF   L+DDV+VKRWL+QLL NISEN
Sbjct:   12 LFPLVLQLTNPEQRESALLELSKKREAFSDLAPILWHSFGTISALLQEIMSIYPMLSPPNLPHGASNRVCNALALLQCVASHPETRSLFLSAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDSEVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEMGLNYICATAERFYAVSTVLSNMVAVLVEQPSVRLLKHIVRCYLRLSDNLRAREALRQCLPDSLRDATFNVALRDDVTVKRWLSQLLINISEN 276
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BLAST of mRNA_P-wetherbeei_contig20.2.1 vs. uniprot
Match: A0A6H5JUJ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUJ5_9PHAE)

HSP 1 Score: 465 bits (1197), Expect = 4.340e-161
Identity = 236/261 (90.42%), Postives = 249/261 (95.40%), Query Frame = 3 
Query:  126 LVLQLTNPDQREGALLELSKKRETFSDLAPILWHSFGTISALLQEIVAIYPMLSPPTLTPHASNRVCNALALLQCVASHPETRALFLNAHIPLYLYPFLNTVSKSRPFEYLRLTSLGVIGALVKMDDTDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQRILLDEMGLSYICATAERFYAVSTVLSNMVAVLVENPSVRLLKHIVRCYLRLSDNLRAREALRQCLPGDLRDSTFMAVLKDDVSVKRWLTQLLFNISE 908
            LVLQLTNPDQREGALLELSKKRE F+DLAPILWHS+GTISALLQE+VAIYP+LSPPTLTPHASNRVCNALALLQCVASHPETRALFL AHIPLYLYPFLNTVSK+RPFEYLRLTSLGVIGALVKMDD +VINFLLQTEIIPLCLRIMETGSELSKTVATFIVQ+ILLDE GL YIC TAERFYAVSTVL NMVAVLVE+PSVRLLKH+VRCYLRLSDNLRAREALRQCLP  LR++TF  VLKDDVSVKRWLT LLFN++E
Sbjct:   14 LVLQLTNPDQREGALLELSKKREAFTDLAPILWHSYGTISALLQEMVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDAEVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEHGLEYICQTAERFYAVSTVLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPDSLRNNTFTNVLKDDVSVKRWLTSLLFNLTE 274
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BLAST of mRNA_P-wetherbeei_contig20.2.1 vs. uniprot
Match: D7FW54_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW54_ECTSI)

HSP 1 Score: 465 bits (1196), Expect = 9.110e-160
Identity = 236/262 (90.08%), Postives = 250/262 (95.42%), Query Frame = 3 
Query:  126 LVLQLTNPDQREGALLELSKKRETFSDLAPILWHSFGTISALLQEIVAIYPMLSPPTLTPHASNRVCNALALLQCVASHPETRALFLNAHIPLYLYPFLNTVSKSRPFEYLRLTSLGVIGALVKMDDTDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQRILLDEMGLSYICATAERFYAVSTVLSNMVAVLVENPSVRLLKHIVRCYLRLSDNLRAREALRQCLPGDLRDSTFMAVLKDDVSVKRWLTQLLFNISEN 911
            LVLQLTNPDQREGALLELSKKRE F+DLAPILWHS+GTISALLQE+VAIYP+LSPPTLTPHASNRVCNALALLQCVASHPETRALFL AHIPLYLYPFLNTVSK+RPFEYLRLTSLGVIGALVKMDD +VINFLLQTEIIPLCLRIMETGSELSKTVATFIVQ+ILLDE GL YIC TAERFYAVSTVL NMVAVLVE+PSVRLLKH+VRCYLRLSDNLRAREALRQCLP  LR++TF  VLKDDVSVKRWLT LLFN++E+
Sbjct:   71 LVLQLTNPDQREGALLELSKKREAFTDLAPILWHSYGTISALLQEMVAIYPLLSPPTLTPHASNRVCNALALLQCVASHPETRALFLKAHIPLYLYPFLNTVSKNRPFEYLRLTSLGVIGALVKMDDAEVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDEHGLEYICQTAERFYAVSTVLGNMVAVLVESPSVRLLKHVVRCYLRLSDNLRAREALRQCLPDALRNNTFTNVLKDDVSVKRWLTSLLFNLTES 332
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BLAST of mRNA_P-wetherbeei_contig20.2.1 vs. uniprot
Match: F0Y9A1_AURAN (Uncharacterized protein n=3 Tax=Pelagomonadales TaxID=54409 RepID=F0Y9A1_AURAN)

HSP 1 Score: 455 bits (1170), Expect = 1.120e-156
Identity = 229/274 (83.58%), Postives = 251/274 (91.61%), Query Frame = 3 
Query:   96 GPELIEDLFPLVLQLTNPDQ---REGALLELSKKRETFSDLAPILWHSFGTISALLQEIVAIYPMLSPPTLTPHASNRVCNALALLQCVASHPETRALFLNAHIPLYLYPFLNTVSKSRPFEYLRLTSLGVIGALVKMDDTDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQRILLDEMGLSYICATAERFYAVSTVLSNMVAVLVENPSVRLLKHIVRCYLRLSDNLRAREALRQCLPGDLRDSTFMAVLKDDVSVKRWLTQLLFNISE 908
            G + +E+L+PLVLQLT PD    RE ALLELSKKRETF+DLAPILWHSFGT+  LLQEIV+IYPMLSPP LT HASNRVCNALALLQCVASHPETR LFLNAH+PLYLYPFLNTVSK+RPFEYLRLTSLGV+GALVKMDD+DVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQ+ILLD+MGL+Y+CATAERFYAVSTVL+NMV  LVE PS+RLLKHIVRCYLRLSDNLRAREALRQCLP  LRD TF   +KDD++VKRWL+ LL+NISE
Sbjct:    2 GEKSVEELYPLVLQLTVPDSPEHRESALLELSKKRETFTDLAPILWHSFGTMGTLLQEIVSIYPMLSPPNLTAHASNRVCNALALLQCVASHPETRGLFLNAHVPLYLYPFLNTVSKNRPFEYLRLTSLGVVGALVKMDDSDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQKILLDDMGLNYVCATAERFYAVSTVLANMVLTLVEQPSIRLLKHIVRCYLRLSDNLRAREALRQCLPESLRDHTFAGHIKDDLTVKRWLSSLLYNISE 275
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BLAST of mRNA_P-wetherbeei_contig20.2.1 vs. uniprot
Match: A0A7S0DZ44_9EUKA (Hypothetical protein n=3 Tax=Prymnesiophyceae TaxID=2608131 RepID=A0A7S0DZ44_9EUKA)

HSP 1 Score: 454 bits (1168), Expect = 3.240e-156
Identity = 234/277 (84.48%), Postives = 249/277 (89.89%), Query Frame = 3 
Query:   81 AAGAAGPELIEDLFPLVLQLTNPDQREGALLELSKKRETFSDLAPILWHSFGTISALLQEIVAIYPMLSPPTLTPHASNRVCNALALLQCVASHPETRALFLNAHIPLYLYPFLNTVSKSRPFEYLRLTSLGVIGALVKMDDTDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQRILLDEMGLSYICATAERFYAVSTVLSNMVAVLVENPSVRLLKHIVRCYLRLSDNLRAREALRQCLPGDLRDSTFMAVLKDDVSVKRWLTQLLFNISEN 911
            AA A G E  E +F LV +LTNP+QRE ALLELSK+RETF DLAPILWHSFGTISALLQEIVAIYP+LSPP+LT  ASNRVCNALALLQCVASHPETR LFLNAHIPL+LYPFLNTVSK+RPFEYLRLTSLGVIGALVK+DD DVINFLL TEIIPLCLRIMETGSELSKTVATFIVQ+ILLDE GL+YICATAERFYAVSTVL N+V  LVE PS RLLKHIVRCYLRLSDN RAREALRQCLP  LRD+TF   LKDDV+ KRWLTQLLFNISE+
Sbjct:   25 AASADGQEDSEKIFLLVAELTNPEQRESALLELSKRRETFVDLAPILWHSFGTISALLQEIVAIYPLLSPPSLTAQASNRVCNALALLQCVASHPETRTLFLNAHIPLFLYPFLNTVSKTRPFEYLRLTSLGVIGALVKVDDADVINFLLSTEIIPLCLRIMETGSELSKTVATFIVQKILLDETGLAYICATAERFYAVSTVLGNLVGTLVEQPSARLLKHIVRCYLRLSDNPRAREALRQCLPEPLRDATFSGCLKDDVTTKRWLTQLLFNISES 301
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BLAST of mRNA_P-wetherbeei_contig20.2.1 vs. uniprot
Match: R1C1A7_EMIHU (Hypothetical protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1C1A7_EMIHU)

HSP 1 Score: 449 bits (1155), Expect = 1.650e-154
Identity = 228/267 (85.39%), Postives = 246/267 (92.13%), Query Frame = 3 
Query:  111 EDLFPLVLQLTNPDQREGALLELSKKRETFSDLAPILWHSFGTISALLQEIVAIYPMLSPPTLTPHASNRVCNALALLQCVASHPETRALFLNAHIPLYLYPFLNTVSKSRPFEYLRLTSLGVIGALVKMDDTDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQRILLDEMGLSYICATAERFYAVSTVLSNMVAVLVENPSVRLLKHIVRCYLRLSDNLRAREALRQCLPGDLRDSTFMAVLKDDVSVKRWLTQLLFNISEN 911
            E +F LVL+LTNP+QRE ALLELSK+RETF DLAPILWHSFGTISALLQEIVAIYP+LSPP+LT  ASNRVCNALALLQCVASHPETR LFLNAHIPL+LYPFLNT+SK+RPFEYLRLTSLGVIGALVK+DD DVINFLL TEIIPLCLRIMETGSELSKTVATFIVQ+ILLDE GL+YICATAERFYAVSTVL N+V  LV+ PS RLLKHIVRCYLRLSDN RAREALRQCLP  LRD+TF A LKDDV+ KRWLTQLLFNI+E+
Sbjct:   18 EKIFHLVLELTNPEQREAALLELSKRRETFIDLAPILWHSFGTISALLQEIVAIYPLLSPPSLTAQASNRVCNALALLQCVASHPETRTLFLNAHIPLFLYPFLNTISKTRPFEYLRLTSLGVIGALVKVDDPDVINFLLSTEIIPLCLRIMETGSELSKTVATFIVQKILLDETGLAYICATAERFYAVSTVLGNLVGSLVDQPSARLLKHIVRCYLRLSDNPRAREALRQCLPDVLRDATFSACLKDDVTTKRWLTQLLFNITES 284
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BLAST of mRNA_P-wetherbeei_contig20.2.1 vs. uniprot
Match: A0A7S3AUU1_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AUU1_9EUKA)

HSP 1 Score: 447 bits (1151), Expect = 8.000e-154
Identity = 226/266 (84.96%), Postives = 244/266 (91.73%), Query Frame = 3 
Query:  111 EDLFPLVLQLTNPDQREGALLELSKKRETFSDLAPILWHSFGTISALLQEIVAIYPMLSPPTLTPHASNRVCNALALLQCVASHPETRALFLNAHIPLYLYPFLNTVSKSRPFEYLRLTSLGVIGALVKMDDTDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQRILLDEMGLSYICATAERFYAVSTVLSNMVAVLVENPSVRLLKHIVRCYLRLSDNLRAREALRQCLPGDLRDSTFMAVLKDDVSVKRWLTQLLFNISE 908
            + +F LVL+LTNPDQRE ALLELSK+RETF+DLAPILWHSFGT+SALLQEIVAIYP+L+PP+LT  ASNRVCNALALLQCVASHPETR LFLNAHIPL+LYPFLNTVSK+RPFEYLRLTSLGVIGALVK+DD DVINFLL TEIIPLCLRIMETGSELSKTVATFIVQ+ILLDE GL+YICATAERFYAVSTVL N+V  LVE PS RLLKHIVRCYLRLSDN RAREALRQCLP  LRD+TF   LKDDV  KRWLTQLLFNI++
Sbjct:   24 DKIFVLVLELTNPDQRESALLELSKRRETFADLAPILWHSFGTVSALLQEIVAIYPLLAPPSLTAQASNRVCNALALLQCVASHPETRTLFLNAHIPLFLYPFLNTVSKTRPFEYLRLTSLGVIGALVKVDDADVINFLLSTEIIPLCLRIMETGSELSKTVATFIVQKILLDETGLAYICATAERFYAVSTVLGNLVGSLVEQPSARLLKHIVRCYLRLSDNPRAREALRQCLPDALRDATFQGCLKDDVITKRWLTQLLFNIND 289
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BLAST of mRNA_P-wetherbeei_contig20.2.1 vs. uniprot
Match: A0A0M0K0H5_9EUKA (Cell differentiation protein n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K0H5_9EUKA)

HSP 1 Score: 446 bits (1148), Expect = 2.280e-153
Identity = 227/270 (84.07%), Postives = 246/270 (91.11%), Query Frame = 3 
Query:  102 ELIEDLFPLVLQLTNPDQREGALLELSKKRETFSDLAPILWHSFGTISALLQEIVAIYPMLSPPTLTPHASNRVCNALALLQCVASHPETRALFLNAHIPLYLYPFLNTVSKSRPFEYLRLTSLGVIGALVKMDDTDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQRILLDEMGLSYICATAERFYAVSTVLSNMVAVLVENPSVRLLKHIVRCYLRLSDNLRAREALRQCLPGDLRDSTFMAVLKDDVSVKRWLTQLLFNISEN 911
            E  + +F LVL+LTNPDQRE ALLELSK+RETF DLAPILWHSFGT+SALLQEIVAIYP+LSPP LT  ASNRVCNALALLQCVASHP+TR LFLNAHIPL+LYPFLNTVSK+RPFEYLRLTSLGVIGALVK+DD DVINFLL TEIIPLCLRIMETGSELSKTVATFIVQ+ILLDE GL+YICATAERFYAVSTVL+N+V  LVE PS RLLKHIVRC+LRLSDN RAREALRQCLP  LRD+TF A LKDDV+ KRW TQLLFNI+E+
Sbjct:   19 EETDKIFVLVLELTNPDQRETALLELSKRRETFPDLAPILWHSFGTVSALLQEIVAIYPLLSPPALTAQASNRVCNALALLQCVASHPDTRTLFLNAHIPLFLYPFLNTVSKTRPFEYLRLTSLGVIGALVKVDDADVINFLLSTEIIPLCLRIMETGSELSKTVATFIVQKILLDETGLAYICATAERFYAVSTVLANLVGALVEQPSGRLLKHIVRCFLRLSDNARAREALRQCLPDALRDATFSACLKDDVTTKRWHTQLLFNITES 288
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig20.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A836CJ98_9STRA6.910e-17092.28Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2V242_9STRA7.470e-16485.46Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2S6Y0_9STRA3.210e-16189.81Hypothetical protein n=2 Tax=Dictyochophyceae TaxI... [more]
A0A6H5JUJ5_9PHAE4.340e-16190.42Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FW54_ECTSI9.110e-16090.08Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
F0Y9A1_AURAN1.120e-15683.58Uncharacterized protein n=3 Tax=Pelagomonadales Ta... [more]
A0A7S0DZ44_9EUKA3.240e-15684.48Hypothetical protein n=3 Tax=Prymnesiophyceae TaxI... [more]
R1C1A7_EMIHU1.650e-15485.39Hypothetical protein n=1 Tax=Emiliania huxleyi Tax... [more]
A0A7S3AUU1_9EUKA8.000e-15484.96Hypothetical protein n=1 Tax=Haptolina ericina Tax... [more]
A0A0M0K0H5_9EUKA2.280e-15384.07Cell differentiation protein n=1 Tax=Chrysochromul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig20contigP-wetherbeei_contig20:8586..10007 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7FW54
Preferred nameRQCD1
PFAMsRcd1
Model size1422
Max annot lvl2759|Eukaryota
KEGG koko:K12606,ko:K13754
KEGG TC2.A.19.4.4
KEGG Pathwayko03018,map03018
Hectar predicted targeting categorysignal peptide
GOsGO:0000003,GO:0000075,GO:0000077,GO:0000278,GO:0000288,GO:0000289,GO:0000932,GO:0000956,GO:0001932,GO:0001934,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0005102,GO:0005154,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0005829,GO:0006139,GO:0006355,GO:0006357,GO:0006401,GO:0006402,GO:0006417,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006977,GO:0007044,GO:0007049,GO:0007093,GO:0007154,GO:0007165,GO:0007166,GO:0007276,GO:0007283,GO:0007346,GO:0007548,GO:0008150,GO:0008152,GO:0009056,GO:0009057,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010033,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010564,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0010948,GO:0016043,GO:0016070,GO:0016071,GO:0017148,GO:0019219,GO:0019220,GO:0019221,GO:0019222,GO:0019439,GO:0019899,GO:0019900,GO:0019904,GO:0019953,GO:0022402,GO:0022414,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030014,GO:0030015,GO:0030330,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031401,GO:0031570,GO:0031571,GO:0031581,GO:0032268,GO:0032269,GO:0032270,GO:0032501,GO:0032502,GO:0032504,GO:0032784,GO:0032786,GO:0032968,GO:0032991,GO:0033135,GO:0033138,GO:0033143,GO:0033144,GO:0033146,GO:0033147,GO:0033554,GO:0034097,GO:0034243,GO:0034248,GO:0034249,GO:0034329,GO:0034330,GO:0034641,GO:0034655,GO:0035556,GO:0035770,GO:0036464,GO:0042058,GO:0042221,GO:0042325,GO:0042327,GO:0042770,GO:0042802,GO:0042803,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044424,GO:0044444,GO:0044464,GO:0044703,GO:0044773,GO:0044774,GO:0044783,GO:0044819,GO:0045742,GO:0045786,GO:0045787,GO:0045893,GO:0045930,GO:0045935,GO:0045937,GO:0045944,GO:0046483,GO:0046700,GO:0046983,GO:0048232,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048585,GO:0048609,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051246,GO:0051247,GO:0051248,GO:0051252,GO:0051254,GO:0051704,GO:0051716,GO:0051726,GO:0060255,GO:0065007,GO:0065009,GO:0070851,GO:0070887,GO:0071156,GO:0071158,GO:0071310,GO:0071345,GO:0071704,GO:0071840,GO:0072331,GO:0072395,GO:0072401,GO:0072413,GO:0072422,GO:0072431,GO:0080090,GO:0090068,GO:0090304,GO:0097159,GO:1901184,GO:1901186,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902400,GO:1902402,GO:1902403,GO:1902680,GO:1902806,GO:1902807,GO:1903047,GO:1903506,GO:1903508,GO:1990904,GO:2000045,GO:2000112,GO:2000113,GO:2000134,GO:2000325,GO:2000327,GO:2001141
Exons1
Evalue7.35e-163
EggNOG OGsCOG5209@1|root,KOG3036@2759|Eukaryota
Ec32 ortholog descriptionArmadillo-like helical
Ec32 orthologEc-01_003420.1
Descriptionpositive regulation of nuclear receptor transcription coactivator activity
Cds size885
COG categoryG
BRITEko00000,ko00001,ko02000,ko03019
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186187.8458052-UTR-P-wetherbeei_contig20:8585..86261683186187.8458052-UTR-P-wetherbeei_contig20:8585..8626Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig20 8586..8626 +
1683186187.8783174-UTR-P-wetherbeei_contig20:9511..100071683186187.8783174-UTR-P-wetherbeei_contig20:9511..10007Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig20 9512..10007 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186187.8660862-CDS-P-wetherbeei_contig20:8626..95111683186187.8660862-CDS-P-wetherbeei_contig20:8626..9511Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig20 8627..9511 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig20.2.1prot_P-wetherbeei_contig20.2.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig20 8627..9511 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig20.2.1

>prot_P-wetherbeei_contig20.2.1 ID=prot_P-wetherbeei_contig20.2.1|Name=mRNA_P-wetherbeei_contig20.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=295bp
MMAAPTMLGAVVPAAGAAGPELIEDLFPLVLQLTNPDQREGALLELSKKR
ETFSDLAPILWHSFGTISALLQEIVAIYPMLSPPTLTPHASNRVCNALAL
LQCVASHPETRALFLNAHIPLYLYPFLNTVSKSRPFEYLRLTSLGVIGAL
VKMDDTDVINFLLQTEIIPLCLRIMETGSELSKTVATFIVQRILLDEMGL
SYICATAERFYAVSTVLSNMVAVLVENPSVRLLKHIVRCYLRLSDNLRAR
EALRQCLPGDLRDSTFMAVLKDDVSVKRWLTQLLFNISENPGAG*
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mRNA from alignment at P-wetherbeei_contig20:8586..10007+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig20.2.1 ID=mRNA_P-wetherbeei_contig20.2.1|Name=mRNA_P-wetherbeei_contig20.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1422bp|location=Sequence derived from alignment at P-wetherbeei_contig20:8586..10007+ (Phaeothamnion wetherbeei SAG_119_79)
ATTGTTTTGGACTCGCACCTTCCCAGGGGGGAAAAAGTGACATGATGGCG
GCACCAACAATGCTCGGCGCCGTAGTACCCGCGGCGGGCGCCGCGGGGCC
AGAGTTGATCGAGGACTTGTTTCCTTTGGTCCTGCAGCTTACCAACCCAG
ATCAGCGCGAGGGCGCGCTCCTGGAGCTGAGCAAGAAGCGTGAGACCTTC
TCGGACCTCGCACCTATCTTATGGCACTCCTTCGGCACCATCTCGGCGCT
CCTGCAGGAAATCGTTGCGATATACCCCATGCTCTCACCGCCGACGCTCA
CCCCGCACGCCAGCAACCGCGTCTGCAACGCGCTGGCGCTGCTGCAGTGC
GTGGCGTCGCACCCGGAGACGCGGGCGCTCTTCCTTAACGCGCACATCCC
GCTCTACCTCTACCCGTTCCTCAACACGGTGAGCAAATCGCGGCCGTTCG
AGTACCTGCGCCTCACGAGCCTTGGTGTCATCGGCGCCCTCGTCAAGATG
GACGACACGGACGTCATCAACTTTCTGCTGCAGACGGAGATCATCCCACT
CTGCCTGCGTATCATGGAGACGGGCAGCGAGCTCAGCAAGACGGTCGCCA
CCTTCATCGTCCAGCGCATCCTCCTCGACGAGATGGGTCTCTCCTACATC
TGCGCGACAGCGGAGCGCTTCTACGCCGTCAGCACCGTTCTCAGCAACAT
GGTCGCCGTGCTTGTTGAGAACCCGTCCGTCCGCCTCCTCAAACACATCG
TCCGCTGCTACCTCCGACTGTCCGACAACCTCCGGGCGCGCGAGGCACTG
CGGCAGTGCCTCCCGGGGGACCTGCGGGACTCGACCTTCATGGCGGTACT
GAAGGATGACGTCTCGGTCAAGCGGTGGCTCACGCAGCTCCTCTTCAACA
TCTCCGAGAACCCCGGCGCCGGATAGTGATGGCGATAGCGAGACGACGAG
GCGCGATGTGGCGGCTCGGCGGGACTACCGGCGGGACTGCAGCTGGCGGT
GGGACTAGCGGCAGCTGGTGGCGAGCGGTGGAACGTCAGCCGGCCGGCGG
CAGAGGCAGCCAACGAAACGACAACGGGCGGTCAGCGAGCATGCGGAGGG
GCGAGGAACGGTCGGCAGGCCCAGCCGGTCTGGCGAACAGGCGAACGAAC
AACCGCAGGCACAGTAGGTTTTGAAGGGCGAGAGAAGGGAGGAGCGGGGA
GGAGAGGGAAGATGTTATTGATTTGGGTTTGGCGATGCACCAGCGCCACC
AGCGTTGCGTTGCAACAGAGATTTGCACAGCCAGCTAGAAGTATACTCTA
CACTTCAAGAGACAACATGTTACGACGATTAGTTCGCAGTCGTTTCATTT
TTGTTCCTTTAATAAAGGTGCGGTTTGCTTTTAATGTGCTGCCGGAGACT
CCTCGTCGCCGCTAACGCGAAC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig20:8586..10007+

>mRNA_P-wetherbeei_contig20.2.1 ID=mRNA_P-wetherbeei_contig20.2.1|Name=mRNA_P-wetherbeei_contig20.2.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=885bp|location=Sequence derived from alignment at P-wetherbeei_contig20:8586..10007+ (Phaeothamnion wetherbeei SAG_119_79)
ATGATGGCGGCACCAACAATGCTCGGCGCCGTAGTACCCGCGGCGGGCGC
CGCGGGGCCAGAGTTGATCGAGGACTTGTTTCCTTTGGTCCTGCAGCTTA
CCAACCCAGATCAGCGCGAGGGCGCGCTCCTGGAGCTGAGCAAGAAGCGT
GAGACCTTCTCGGACCTCGCACCTATCTTATGGCACTCCTTCGGCACCAT
CTCGGCGCTCCTGCAGGAAATCGTTGCGATATACCCCATGCTCTCACCGC
CGACGCTCACCCCGCACGCCAGCAACCGCGTCTGCAACGCGCTGGCGCTG
CTGCAGTGCGTGGCGTCGCACCCGGAGACGCGGGCGCTCTTCCTTAACGC
GCACATCCCGCTCTACCTCTACCCGTTCCTCAACACGGTGAGCAAATCGC
GGCCGTTCGAGTACCTGCGCCTCACGAGCCTTGGTGTCATCGGCGCCCTC
GTCAAGATGGACGACACGGACGTCATCAACTTTCTGCTGCAGACGGAGAT
CATCCCACTCTGCCTGCGTATCATGGAGACGGGCAGCGAGCTCAGCAAGA
CGGTCGCCACCTTCATCGTCCAGCGCATCCTCCTCGACGAGATGGGTCTC
TCCTACATCTGCGCGACAGCGGAGCGCTTCTACGCCGTCAGCACCGTTCT
CAGCAACATGGTCGCCGTGCTTGTTGAGAACCCGTCCGTCCGCCTCCTCA
AACACATCGTCCGCTGCTACCTCCGACTGTCCGACAACCTCCGGGCGCGC
GAGGCACTGCGGCAGTGCCTCCCGGGGGACCTGCGGGACTCGACCTTCAT
GGCGGTACTGAAGGATGACGTCTCGGTCAAGCGGTGGCTCACGCAGCTCC
TCTTCAACATCTCCGAGAACCCCGGCGCCGGATAG
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