mRNA_P-wetherbeei_contig19984.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19984.1.1 vs. uniprot
Match: A0A537TN09_9PROT (Ldh family oxidoreductase (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537TN09_9PROT) HSP 1 Score: 159 bits (402), Expect = 1.460e-47 Identity = 81/134 (60.45%), Postives = 102/134 (76.12%), Query Frame = 1
Query: 1 LGLSLPAGVALDAGGNPTTDPDAAKRGALLPFGGHKGFALGLAMQALGVLAGSGMNAAKDYGYLIIAMRPDLLLPLDDFKRELAIMLSRIKSVSRQPGVPEIRLPSEHSYRSRERALREGIVIDRIVHDRLVAM 402
LG LP GVAL GG PT DP AA+RGALLPFGG+KGF L L MQALG+LAGSG +A +YGYL +A RPDL+ D F+R++ ++ RIK+ R+PGV +IR+PSE ++ SRERAL EG+ IDR+V D LVA+
Sbjct: 8 LGELLPEGVALGPGGEPTRDPTAARRGALLPFGGYKGFGLALMMQALGLLAGSGSDAESEYGYLFVAFRPDLIASADAFERQVTQLIERIKATPRRPGVDDIRIPSERAFHSRERALHEGLEIDRVVFDALVAL 141
BLAST of mRNA_P-wetherbeei_contig19984.1.1 vs. uniprot
Match: A0A7X1P0E2_9PROT (Ldh family oxidoreductase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7X1P0E2_9PROT) HSP 1 Score: 160 bits (406), Expect = 7.560e-46 Identity = 85/139 (61.15%), Postives = 106/139 (76.26%), Query Frame = 1
Query: 4 GLSLPAGVALDAGGNPTTDPDAAKRGALLPFGGHKGFALGLAMQALGVLAGSGMNAAKDYGYLIIAMRPDLLLPLDDFKRELAIMLSRIKSVSRQPGVPEIRLPSEHSYRSRERALREGIVIDRIVHDRLVAMAREQQP 420
G LP GVA+DA G PT DP AK ALLPFGG+KGFAL L MQALGVLAGSG K YGY ++A++PDLLLPLDDF+R+++ ML+R+K+ RQPGV EIRLP E + R R +ALREGI IDR ++D L+A+ + + P
Sbjct: 197 GAVLPEGVAIDAHGQPTRDP--AKVHALLPFGGYKGFALALTMQALGVLAGSGYGDDKTYGYFVMAIKPDLLLPLDDFRRDMSAMLARVKATPRQPGVDEIRLPGERALRERAKALREGIEIDRQIYDALLALPQGELP 333
BLAST of mRNA_P-wetherbeei_contig19984.1.1 vs. uniprot
Match: A0A537RGW3_9PROT (Ldh family oxidoreductase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537RGW3_9PROT) HSP 1 Score: 157 bits (396), Expect = 1.350e-44 Identity = 83/140 (59.29%), Postives = 101/140 (72.14%), Query Frame = 1
Query: 1 LGLSLPAGVALDAGGNPTTDPDAAKRGALLPFGGHKGFALGLAMQALGVLAGSGMNAAKDYGYLIIAMRPDLLLPLDDFKRELAIMLSRIKSVSRQPGVPEIRLPSEHSYRSRERALREGIVIDRIVHDRLVAMAREQQP 420
LG LP GVAL G PT D A+RGALLPFGG+KGF L L MQALG+LAG G N +DYGYL IA +PDLL P D F+RE+ +L R+K+ RQ GV EIR+PSE ++RSRERALREG+ +DR+V+D L A+ P
Sbjct: 155 LGELLPEGVALGPDGEPTRDATLARRGALLPFGGYKGFGLALMMQALGLLAGFGPNGERDYGYLFIAFKPDLLGPADVFEREVTHLLERVKATPRQSGVNEIRIPSERAFRSRERALREGLEVDRLVYDALEALRAPSAP 294
BLAST of mRNA_P-wetherbeei_contig19984.1.1 vs. uniprot
Match: A0A537THS9_9PROT (Ldh family oxidoreductase (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537THS9_9PROT) HSP 1 Score: 154 bits (390), Expect = 2.480e-44 Identity = 79/134 (58.96%), Postives = 100/134 (74.63%), Query Frame = 1
Query: 1 LGLSLPAGVALDAGGNPTTDPDAAKRGALLPFGGHKGFALGLAMQALGVLAGSGMNAAKDYGYLIIAMRPDLLLPLDDFKRELAIMLSRIKSVSRQPGVPEIRLPSEHSYRSRERALREGIVIDRIVHDRLVAM 402
LG LP GVAL GG PT DP AA+RGALLPFGG+KGF L L MQALG+LA S +A +YGYL +A RPDL+ D F+R++ ++ RIK+ R+PGV +IR+PSE ++ SRERAL EG+ IDR+V D LVA+
Sbjct: 118 LGELLPEGVALGPGGEPTRDPTAARRGALLPFGGYKGFGLALMMQALGLLASSSSDAESEYGYLFVAFRPDLIASADAFERQVTQLIERIKATPRRPGVDDIRIPSERAFHSRERALHEGLEIDRVVFDALVAL 251
BLAST of mRNA_P-wetherbeei_contig19984.1.1 vs. uniprot
Match: A0A1H0WAA6_9BURK (Malate/lactate/ureidoglycolate dehydrogenase, LDH2 family n=1 Tax=Acidovorax cattleyae TaxID=80868 RepID=A0A1H0WAA6_9BURK) HSP 1 Score: 157 bits (396), Expect = 4.140e-44 Identity = 82/134 (61.19%), Postives = 99/134 (73.88%), Query Frame = 1
Query: 4 GLSLPAGVALDAGGNPTTDPDAAKRGALLPFGGHKGFALGLAMQALGVLAGSGMNAAKDYGYLIIAMRPDLLLPLDDFKRELAIMLSRIKSVSRQPGVPEIRLPSEHSYRSRERALREGIVIDRIVHDRLVAMA 405
G LPAGVA+D+ G PTTDP A+ GALLPFGGHKGFAL LA+QALGV AGSG NA KDYGYL++AM+PDLLLPL+ F+ +L + RI++ RQPGV IR+PSE + R R GI +DR V D L A+A
Sbjct: 203 GEPLPAGVAIDSEGRPTTDPHVARAGALLPFGGHKGFALALAVQALGVFAGSGFNADKDYGYLLLAMKPDLLLPLETFRNQLREEIERIRATPRQPGVDAIRIPSERAVELRRRHQASGIALDRTVFDALRALA 336
BLAST of mRNA_P-wetherbeei_contig19984.1.1 vs. uniprot
Match: A0A7V8SZG9_9BACT (Ldh family oxidoreductase n=3 Tax=Bacteria TaxID=2 RepID=A0A7V8SZG9_9BACT) HSP 1 Score: 154 bits (388), Expect = 3.540e-43 Identity = 79/138 (57.25%), Postives = 101/138 (73.19%), Query Frame = 1
Query: 1 LGLSLPAGVALDAGGNPTTDPDAAKRGALLPFGGHKGFALGLAMQALGVLAGSGMNAAKDYGYLIIAMRPDLLLPLDDFKRELAIMLSRIKSVSRQPGVPEIRLPSEHSYRSRERALREGIVIDRIVHDRLVAMAREQ 414
LG LP GVAL GG PT DP AA+RGALLPFGG+KGF L L MQALG+LAGSG +A +YG+L +A RPDL+ D F++ + ++ RIK+ R+PGV +IR+P E ++ SRERAL EG+ IDR+V D LVA+ Q
Sbjct: 193 LGELLPEGVALGPGGEPTRDPTAARRGALLPFGGYKGFGLALMMQALGLLAGSGSDAESEYGFLFVAFRPDLIGSADTFEQRVTELIERIKATPRRPGVDDIRIPCERAFHSRERALHEGLEIDRVVFDALVALRARQ 330
BLAST of mRNA_P-wetherbeei_contig19984.1.1 vs. uniprot
Match: A0A2V6QPV3_9BACT (Lactate dehydrogenase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6QPV3_9BACT) HSP 1 Score: 151 bits (381), Expect = 2.270e-42 Identity = 81/135 (60.00%), Postives = 97/135 (71.85%), Query Frame = 1
Query: 1 LGLSLPAGVALDAGGNPTTDPDAAKRGALLPFGGHKGFALGLAMQALGVLAGSGMNAAKDYGYLIIAMRPDLLLPLDDFKRELAIMLSRIKSVSRQPGVPEIRLPSEHSYRSRERALREGIVIDRIVHDRLVAMA 405
LG+ LP GVALDA G PTTD AA+RGA+LPFGGHKG+AL LA ALGVL G A GY+ IA +PDL +PLDD++R LA + RIK++ RQ GV EIR+P E +YR R R REGI IDR +HD LV +A
Sbjct: 173 LGMPLPEGVALDANGRPTTDARAARRGAILPFGGHKGYALALATHALGVLCGDQQEHA---GYIFIAFKPDLFMPLDDYRRALAGEIRRIKAIPRQDGVDEIRIPGERAYRERARLTREGIEIDRRIHDALVRLA 304
BLAST of mRNA_P-wetherbeei_contig19984.1.1 vs. uniprot
Match: A0A208YAD5_9BURK (Uncharacterized protein n=2 Tax=Pigmentiphaga TaxID=152267 RepID=A0A208YAD5_9BURK) HSP 1 Score: 150 bits (380), Expect = 7.800e-42 Identity = 83/135 (61.48%), Postives = 101/135 (74.81%), Query Frame = 1
Query: 4 GLSLPAGVALDAGGNPTTDPDAAKRGALLPFGGHKGFALGLAMQALGVLAGSGMNAAKDYGYLIIAMRPDLLLPLDDFKRELAIMLSRIKSVSRQPGVPEIRLPSEHSYRSRERALREGIVIDRIVHDRLVAMAR 408
G +LP GVA+DA G PT DP A GA+LPFGGHKGFALGLAMQALG+LAGSG + + GYLIIA+RPDL++PL++++R L+ L+RIK+ QPGV IRLPSE S + RER R GIVIDR V L +AR
Sbjct: 202 GETLPEGVAIDANGEPTQDPILASMGAVLPFGGHKGFALGLAMQALGILAGSGDDNEERAGYLIIAIRPDLMVPLNEYRRTLSETLARIKATPLQPGVESIRLPSERSQQERERNQRTGIVIDRQVQVALQRLAR 336
BLAST of mRNA_P-wetherbeei_contig19984.1.1 vs. uniprot
Match: A0A2V6YUN8_9BACT (Lactate dehydrogenase n=1 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6YUN8_9BACT) HSP 1 Score: 150 bits (378), Expect = 1.210e-41 Identity = 78/141 (55.32%), Postives = 101/141 (71.63%), Query Frame = 1
Query: 1 LGLSLPAGVALDAGGNPTTDPDAAKRGALLPFGGHKGFALGLAMQALGVLAGSGMNAAKDYGYLIIAMRPDLLLPLDDFKRELAIMLSRIKSVSRQPGVPEIRLPSEHSYRSRERALREGIVIDRIVHDRLVAMAREQQPN 423
LG+ LP VA+D G PTTD AA+RGALLPFGGHKG+AL LAM ALGVL G+ + GYL IA +PDL +PL D++R LA ++ IK++ RQ GV EIR+P E +YR R R REGIV+DR +HD L+A+A ++ +
Sbjct: 196 LGIPLPEDVAIDERGRPTTDAAAARRGALLPFGGHKGYALALAMHALGVLC-RGVATEESTGYLFIAFKPDLFVPLQDYRRALAAEIAAIKAIPRQEGVAEIRIPGERAYRERARLAREGIVVDRRIHDALIALAARKRQD 335
BLAST of mRNA_P-wetherbeei_contig19984.1.1 vs. uniprot
Match: A0A2V6XS20_9BACT (Lactate dehydrogenase n=2 Tax=Candidatus Rokubacteria bacterium TaxID=2053607 RepID=A0A2V6XS20_9BACT) HSP 1 Score: 148 bits (374), Expect = 1.140e-40 Identity = 77/135 (57.04%), Postives = 98/135 (72.59%), Query Frame = 1
Query: 1 LGLSLPAGVALDAGGNPTTDPDAAKRGALLPFGGHKGFALGLAMQALGVLAGSGMNAAKDYGYLIIAMRPDLLLPLDDFKRELAIMLSRIKSVSRQPGVPEIRLPSEHSYRSRERALREGIVIDRIVHDRLVAMA 405
LG+ LP GVA+D G PTTD AA+RGALLPFGGHKG+AL LAM ALGVL SG + GYL IA +PDL +PL+D++R LA ++ IK+ RQ GV EIR+P E +YR R R R+G+ ID+ +HD L+A+A
Sbjct: 228 LGIPLPEGVAIDEDGRPTTDATAARRGALLPFGGHKGYALALAMHALGVLC-SGTTDTESAGYLFIAFKPDLFMPLEDYRRALAAEIALIKATPRQDGVDEIRIPGERAYRDRARLTRDGLEIDQRIHDALIALA 361 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19984.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19984.1.1 >prot_P-wetherbeei_contig19984.1.1 ID=prot_P-wetherbeei_contig19984.1.1|Name=mRNA_P-wetherbeei_contig19984.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=142bp LGLSLPAGVALDAGGNPTTDPDAAKRGALLPFGGHKGFALGLAMQALGVLback to top mRNA from alignment at P-wetherbeei_contig19984:9..434+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19984.1.1 ID=mRNA_P-wetherbeei_contig19984.1.1|Name=mRNA_P-wetherbeei_contig19984.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=426bp|location=Sequence derived from alignment at P-wetherbeei_contig19984:9..434+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19984:9..434+ >mRNA_P-wetherbeei_contig19984.1.1 ID=mRNA_P-wetherbeei_contig19984.1.1|Name=mRNA_P-wetherbeei_contig19984.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=426bp|location=Sequence derived from alignment at P-wetherbeei_contig19984:9..434+ (Phaeothamnion wetherbeei SAG_119_79)back to top |