mRNA_P-wetherbeei_contig1996.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1996.4.1
Unique NamemRNA_P-wetherbeei_contig1996.4.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig1996.4.1 vs. uniprot
Match: F0W9F1_9STRA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2 n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0W9F1_9STRA)

HSP 1 Score: 139 bits (351), Expect = 1.050e-40
Identity = 69/104 (66.35%), Postives = 82/104 (78.85%), Query Frame = 1 
Query:   10 VFNSLVKQYHRTTPRKVKLLDAFLVYVATTGVLVAAYSIVGGSFPFNSFLASFLCTVGVFVLTVSLRLQVDASN-MAKRSPERAFADYVICNLILFLVVFNFMG 318
            ++N    QY + TP+K++LLD FL YV  TG+L   Y I+ GSFPFNSFL+ F+CTVGVFVLTVSLR+QVDASN    RS +RAFADY+ CNLILFLVVFNFMG
Sbjct:   18 IWNDFKHQYRKETPKKLQLLDGFLAYVLATGILQFVYCILVGSFPFNSFLSGFICTVGVFVLTVSLRMQVDASNKFTDRSEQRAFADYLFCNLILFLVVFNFMG 121
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BLAST of mRNA_P-wetherbeei_contig1996.4.1 vs. uniprot
Match: A0A485L3R2_9STRA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L3R2_9STRA)

HSP 1 Score: 135 bits (341), Expect = 4.300e-39
Identity = 66/110 (60.00%), Postives = 83/110 (75.45%), Query Frame = 1 
Query:    4 GDVFNSLVKQYHRTTPRKVKLLDAFLVYVATTGVLVAAYSIVGGSFPFNSFLASFLCTVGVFVLTVSLRLQVDASNMAK-----RSPERAFADYVICNLILFLVVFNFMG 318
              + + L+ QY++ TPRK+KL+D FL YV  TGVL   Y ++ G+FPFNSFL+ F+ TVGVFVLTVSLR+Q+D SN A      RSP+RAFADY+ CNL+LFLVV NFMG
Sbjct:   19 STLLSELLSQYNKNTPRKIKLIDGFLAYVMATGVLQFLYCLLVGTFPFNSFLSGFIATVGVFVLTVSLRMQIDPSNAAAFAADPRSPQRAFADYLFCNLVLFLVVMNFMG 128
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BLAST of mRNA_P-wetherbeei_contig1996.4.1 vs. uniprot
Match: D0NLD6_PHYIT (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2 n=15 Tax=Peronosporaceae TaxID=4777 RepID=D0NLD6_PHYIT)

HSP 1 Score: 135 bits (339), Expect = 6.030e-39
Identity = 63/107 (58.88%), Postives = 82/107 (76.64%), Query Frame = 1 
Query:    1 IGDVFNSLVKQYHRTTPRKVKLLDAFLVYVATTGVLVAAYSIVGGSFPFNSFLASFLCTVGVFVLTVSLRLQVDA-SNMAKRSPERAFADYVICNLILFLVVFNFMG 318
            +G +   L  +Y +TTP+K+KL+D FL YV  TGVL   Y ++ G+FPFNSFLA F+CTVGVFVL VSLR+Q++  +N   R+ +RAFADY+ CN+ILFLVVFNFMG
Sbjct:   10 VGSILGDLCSKYDKTTPKKIKLIDGFLAYVLATGVLQFIYCLLVGNFPFNSFLAGFVCTVGVFVLAVSLRMQINPENNFGDRTEQRAFADYLFCNIILFLVVFNFMG 116
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BLAST of mRNA_P-wetherbeei_contig1996.4.1 vs. uniprot
Match: A0A024G6Z8_9STRA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2 n=1 Tax=Albugo candida TaxID=65357 RepID=A0A024G6Z8_9STRA)

HSP 1 Score: 132 bits (333), Expect = 5.740e-38
Identity = 63/107 (58.88%), Postives = 82/107 (76.64%), Query Frame = 1 
Query:    1 IGDVFNSLVKQYHRTTPRKVKLLDAFLVYVATTGVLVAAYSIVGGSFPFNSFLASFLCTVGVFVLTVSLRLQVDASN-MAKRSPERAFADYVICNLILFLVVFNFMG 318
            +  ++N    QY + TP++++LLD FL YV  TG+L   Y ++ G+FPFNSFL+ F+CTVGVFVLTVSLR+QVD +N    R+ +RAFADY+ CNLILFLVVFNFMG
Sbjct:   15 LSAIWNDFNHQYRKETPKQLQLLDGFLAYVLATGILQFVYCVLVGNFPFNSFLSGFICTVGVFVLTVSLRMQVDPTNEFVDRTEQRAFADYLFCNLILFLVVFNFMG 121
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BLAST of mRNA_P-wetherbeei_contig1996.4.1 vs. uniprot
Match: K3WS81_GLOUD (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WS81_GLOUD)

HSP 1 Score: 132 bits (332), Expect = 6.400e-38
Identity = 63/107 (58.88%), Postives = 81/107 (75.70%), Query Frame = 1 
Query:    1 IGDVFNSLVKQYHRTTPRKVKLLDAFLVYVATTGVLVAAYSIVGGSFPFNSFLASFLCTVGVFVLTVSLRLQVDASNMAK-RSPERAFADYVICNLILFLVVFNFMG 318
            +G +      +Y +TTP+K+KL+D FL YV  TG+L   Y ++ G+FPFNSFLA F+CTVGVFVL VSLR+Q++  N  K RS +RAFADY+ CN+ILFLVVFNFMG
Sbjct:    7 VGGILADFQTKYQQTTPKKIKLIDGFLAYVLATGILQFIYCVLVGTFPFNSFLAGFVCTVGVFVLGVSLRMQINPENEFKDRSEQRAFADYLFCNIILFLVVFNFMG 113
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BLAST of mRNA_P-wetherbeei_contig1996.4.1 vs. uniprot
Match: A0A6G0XIX2_9STRA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2 n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XIX2_9STRA)

HSP 1 Score: 132 bits (333), Expect = 7.090e-38
Identity = 67/109 (61.47%), Postives = 80/109 (73.39%), Query Frame = 1 
Query:    7 DVFNSLVKQYHRTTPRKVKLLDAFLVYVATTGVLVAAYSIVGGSFPFNSFLASFLCTVGVFVLTVSLRLQVDASNM-----AKRSPERAFADYVICNLILFLVVFNFMG 318
             +   L  QY + TPRKVKL+D FLVYV  TG+L   Y ++ G+FPFNSFL+ FL TVGVFVLTVSLR+Q+D SN      + RSP+RAFADY+ CN ILFLVV NFMG
Sbjct:   20 SIVADLWTQYSKNTPRKVKLIDGFLVYVLATGILQFVYCVLVGTFPFNSFLSGFLSTVGVFVLTVSLRMQIDPSNQQAFAASPRSPQRAFADYLFCNCILFLVVMNFMG 128
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BLAST of mRNA_P-wetherbeei_contig1996.4.1 vs. uniprot
Match: T0PSD9_SAPDV (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2 n=4 Tax=Saprolegniaceae TaxID=4764 RepID=T0PSD9_SAPDV)

HSP 1 Score: 132 bits (332), Expect = 9.200e-38
Identity = 65/111 (58.56%), Postives = 82/111 (73.87%), Query Frame = 1 
Query:    1 IGDVFNSLVKQYHRTTPRKVKLLDAFLVYVATTGVLVAAYSIVGGSFPFNSFLASFLCTVGVFVLTVSLRLQV-----DASNMAKRSPERAFADYVICNLILFLVVFNFMG 318
            +  + + L+ QY + TPRK+KL+D FL YV  TGVL   Y ++ G+FPFNSFL+ F+ TVGVFVLTVSLR+Q+     DA + A R+PERAFADY+ CN ILFLVV NFMG
Sbjct:   15 VNGILSDLLSQYSKNTPRKMKLIDGFLAYVLATGVLQFVYCMLVGTFPFNSFLSGFISTVGVFVLTVSLRMQINPTNADAFSSAPRTPERAFADYLFCNFILFLVVMNFMG 125
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BLAST of mRNA_P-wetherbeei_contig1996.4.1 vs. uniprot
Match: G4ZSB6_PHYSP (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2 n=1 Tax=Phytophthora sojae (strain P6497) TaxID=1094619 RepID=G4ZSB6_PHYSP)

HSP 1 Score: 133 bits (334), Expect = 1.420e-37
Identity = 62/107 (57.94%), Postives = 81/107 (75.70%), Query Frame = 1 
Query:    1 IGDVFNSLVKQYHRTTPRKVKLLDAFLVYVATTGVLVAAYSIVGGSFPFNSFLASFLCTVGVFVLTVSLRLQVDA-SNMAKRSPERAFADYVICNLILFLVVFNFMG 318
            +G +      +Y +TTP+K+KL+D FL YV  TGVL   Y ++ G+FPFNSFLA F+CTVGVFVL VSLR+Q++  +N   R+ +RAFADY+ CN+ILFLVVFNFMG
Sbjct:   57 VGSILGDFCAKYDKTTPKKIKLIDGFLAYVLATGVLQFIYCLLVGNFPFNSFLAGFVCTVGVFVLAVSLRMQINPENNFGDRTEQRAFADYLFCNIILFLVVFNFMG 163
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BLAST of mRNA_P-wetherbeei_contig1996.4.1 vs. uniprot
Match: A0A6A3ZEA5_9STRA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2 n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3ZEA5_9STRA)

HSP 1 Score: 132 bits (333), Expect = 1.690e-37
Identity = 62/107 (57.94%), Postives = 80/107 (74.77%), Query Frame = 1 
Query:    1 IGDVFNSLVKQYHRTTPRKVKLLDAFLVYVATTGVLVAAYSIVGGSFPFNSFLASFLCTVGVFVLTVSLRLQVDASN-MAKRSPERAFADYVICNLILFLVVFNFMG 318
            +G +      +Y +TTP+K+KL+D FL YV  TGVL   Y ++ G+FPFNSFLA F+CTVGVFVL VSLR+Q++  N    R+ +RAFADY+ CN+ILFLVVFNFMG
Sbjct:   51 VGSILGDFCAKYDKTTPKKIKLIDGFLAYVLATGVLQFIYCLLVGNFPFNSFLAGFVCTVGVFVLAVSLRMQINPENSFGDRTEQRAFADYLFCNIILFLVVFNFMG 157
[Close]
BLAST of mRNA_P-wetherbeei_contig1996.4.1 vs. uniprot
Match: A0A3M6VA93_9STRA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit OST2 n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VA93_9STRA)

HSP 1 Score: 131 bits (329), Expect = 3.890e-37
Identity = 62/106 (58.49%), Postives = 82/106 (77.36%), Query Frame = 1 
Query:    1 IGDVFNSLVKQYHRTTPRKVKLLDAFLVYVATTGVLVAAYSIVGGSFPFNSFLASFLCTVGVFVLTVSLRLQVDA-SNMAKRSPERAFADYVICNLILFLVVFNFM 315
            +G +   L  +Y +TT +K+KL+D FLVYV  TG+L   Y ++ GSFPFNSFLA F+CTVGVFVL VSLR+Q++  +N   R+ +RAFADY++CN+ILFLVVFNFM
Sbjct:   14 VGSILGDLCTKYDKTTSKKIKLIDGFLVYVLATGLLQFIYCLLVGSFPFNSFLAGFVCTVGVFVLAVSLRMQINPENNFGDRTEQRAFADYLLCNIILFLVVFNFM 119
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1996.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
F0W9F1_9STRA1.050e-4066.35Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A485L3R2_9STRA4.300e-3960.00Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
D0NLD6_PHYIT6.030e-3958.88Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A024G6Z8_9STRA5.740e-3858.88Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
K3WS81_GLOUD6.400e-3858.88Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A6G0XIX2_9STRA7.090e-3861.47Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
T0PSD9_SAPDV9.200e-3858.56Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
G4ZSB6_PHYSP1.420e-3757.94Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A6A3ZEA5_9STRA1.690e-3757.94Dolichyl-diphosphooligosaccharide--protein glycosy... [more]
A0A3M6VA93_9STRA3.890e-3758.49Dolichyl-diphosphooligosaccharide--protein glycosy... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1996contigP-wetherbeei_contig1996:4240..5097 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog653948.CCA17765
Preferred nameDAD1
PFAMsDAD
Model size321
Max annot lvl2759|Eukaryota
KEGG koko:K12668
KEGG Pathwayko00510,ko00513,ko01100,ko04141,map00510,map00513,map01100,map04141
KEGG ModuleM00072
Hectar predicted targeting categorysignal anchor
GOsGO:0001701,GO:0001824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005783,GO:0005789,GO:0006464,GO:0006486,GO:0006487,GO:0006807,GO:0007275,GO:0007584,GO:0008150,GO:0008152,GO:0008250,GO:0009058,GO:0009059,GO:0009100,GO:0009101,GO:0009605,GO:0009790,GO:0009792,GO:0009987,GO:0009991,GO:0010941,GO:0012505,GO:0016020,GO:0016021,GO:0018193,GO:0018196,GO:0018279,GO:0019538,GO:0031224,GO:0031667,GO:0031984,GO:0032501,GO:0032502,GO:0032991,GO:0034645,GO:0036211,GO:0042175,GO:0042221,GO:0042493,GO:0042981,GO:0043009,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043413,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044425,GO:0044432,GO:0044444,GO:0044446,GO:0044464,GO:0048519,GO:0048523,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0060548,GO:0065007,GO:0070085,GO:0071704,GO:0098796,GO:0098827,GO:1901135,GO:1901137,GO:1901564,GO:1901566,GO:1901576,GO:1902494,GO:1990234
Exons3
Evalue1.71e-41
EggNOG OGsKOG1746@1|root,KOG1746@2759|Eukaryota
Ec32 ortholog descriptionOligosaccharyltransferase, DAD1 subunit (or epsilon subunit)
Ec32 orthologEc-07_004230.1
Descriptiondolichyl-diphosphooligosaccharide-protein glycotransferase activity
Cds size321
COG categoryI
BRITEko00000,ko00001,ko00002
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186186.2812107-CDS-P-wetherbeei_contig1996:4239..43611683186186.2812107-CDS-P-wetherbeei_contig1996:4239..4361Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1996 4240..4361 -
1683186186.2899914-CDS-P-wetherbeei_contig1996:4660..47481683186186.2899914-CDS-P-wetherbeei_contig1996:4660..4748Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1996 4661..4748 -
1683186186.2973392-CDS-P-wetherbeei_contig1996:4986..50971683186186.2973392-CDS-P-wetherbeei_contig1996:4986..5097Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1996 4987..5097 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1996.4.1prot_P-wetherbeei_contig1996.4.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1996 4240..5097 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1996.4.1

>prot_P-wetherbeei_contig1996.4.1 ID=prot_P-wetherbeei_contig1996.4.1|Name=mRNA_P-wetherbeei_contig1996.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=107bp
IGDVFNSLVKQYHRTTPRKVKLLDAFLVYVATTGVLVAAYSIVGGSFPFN
SFLASFLCTVGVFVLTVSLRLQVDASNMAKRSPERAFADYVICNLILFLV
VFNFMG*
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mRNA from alignment at P-wetherbeei_contig1996:4240..5097-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1996.4.1 ID=mRNA_P-wetherbeei_contig1996.4.1|Name=mRNA_P-wetherbeei_contig1996.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=858bp|location=Sequence derived from alignment at P-wetherbeei_contig1996:4240..5097- (Phaeothamnion wetherbeei SAG_119_79)
ATTGGGGATGTCTTCAACAGCCTGGTCAAACAATATCACAGGACGACACC
GAGAAAGGTCAAACTGCTGGACGCTTTTCTCGTCTACGTCGCAACAACAG
GAGTCCTCGTGGTAGGTAGATGGTGTTTTGATAAGGATCATGTCATAGTT
GAGACAGGGTCAATTGGCAACTCAACACTTCTCCTGCCTTCCCGTTGCTA
CGCAGCCTTAAACTCCAGACGTCGCACTCTTTGCGTTTACTGATCTAAAT
GCATTGGCTTGTTGTTGTTTCGCGATTTGATATCAGCGTACATCTTGTTT
TGGCTTCAGCCCCTCCTTCGTTTTCCTGTCTTTCGATGTTCGCTTGCAGG
CCGCGTACAGCATTGTTGGGGGCTCCTTTCCGTTCAATTCGTTCCTTGCA
AGCTTCCTGTGCACGGTCGGAGTCTTCGTACTGACAGGTGTGCGTTAAAG
CTACTCTTGACCTCGCTTCTTCGAGTAGTTGAAGCTGGCCCCACCAATCT
TACCTCGGTCGCAGGCTTTTTCCTAGCGTCCGCGAGTTAGCTCGGCCGTT
TCCGTTCATGCTCATTCTTCTTGGTATCTATGCCTCGCTGCTACCTTGCT
ACATCTGATTCTCAACCTCAATCCATGCATACACAGTATGCTTGACCTCG
CTCGCCTTCTCTTTACGCATCGGCAATATTGCCCATTGTATATCGAGCGA
CGGCGGCGGCGGCGGCGACGGCGACAACGGGATCAGTCTCGTTGCGGCTG
CAGGTGGACGCGAGCAACATGGCGAAGCGGTCGCCGGAGAGAGCCTTCGC
CGACTACGTTATTTGCAATCTCATCCTCTTCCTCGTCGTTTTCAACTTTA
TGGGATAG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig1996:4240..5097-

>mRNA_P-wetherbeei_contig1996.4.1 ID=mRNA_P-wetherbeei_contig1996.4.1|Name=mRNA_P-wetherbeei_contig1996.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=321bp|location=Sequence derived from alignment at P-wetherbeei_contig1996:4240..5097- (Phaeothamnion wetherbeei SAG_119_79)
ATTGGGGATGTCTTCAACAGCCTGGTCAAACAATATCACAGGACGACACC
GAGAAAGGTCAAACTGCTGGACGCTTTTCTCGTCTACGTCGCAACAACAG
GAGTCCTCGTGGCCGCGTACAGCATTGTTGGGGGCTCCTTTCCGTTCAAT
TCGTTCCTTGCAAGCTTCCTGTGCACGGTCGGAGTCTTCGTACTGACAGT
CTCGTTGCGGCTGCAGGTGGACGCGAGCAACATGGCGAAGCGGTCGCCGG
AGAGAGCCTTCGCCGACTACGTTATTTGCAATCTCATCCTCTTCCTCGTC
GTTTTCAACTTTATGGGATAG
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