mRNA_P-wetherbeei_contig19947.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19947.1.1 vs. uniprot
Match: D7FQQ5_ECTSI (4'-phosphopantetheinyl transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQQ5_ECTSI) HSP 1 Score: 108 bits (270), Expect = 2.200e-23 Identity = 62/121 (51.24%), Postives = 79/121 (65.29%), Query Frame = 1
Query: 463 LINAFQLTLPMGRCVGIVIPPELDAPGISAAGAELLPEELDFCLQLPLPMRATFLGGRVAMRRALG-------ALSGQVGPILRNPYGAPVLPPGMSGSISHKRHVAVALLRVGDGPHLGM 804
L A LP GRCVG+ +PP L ++AAG ELLP+E+ +CL LP ++ FLGGR+A+RRAL A S Q IL N GAPVLP G+S SISHK+H+AVAL++ G HLG+
Sbjct: 95 LPTAMDRILPFGRCVGVALPPTLTDDVMTAAGEELLPKEMAYCLGLPRALQLGFLGGRLAIRRALNGMEDVSAAASSQA--ILHNQDGAPVLPEGVSASISHKQHLAVALVQSGCEGHLGI 213
BLAST of mRNA_P-wetherbeei_contig19947.1.1 vs. uniprot
Match: A0A7S2SQZ6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQZ6_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 2.770e-15 Identity = 55/110 (50.00%), Postives = 68/110 (61.82%), Query Frame = 1
Query: 475 FQLTLPMGRCVGIVIPPELDAPGISAAGAELLPEELDFCLQLPLPMRATFLGGRVAMRRALGA-LSGQVGPILRNPYGAPVLPPGMSGSISHKRHVAVALLRVGDGPHLG 801
F L G C+G+ +P DA +A EL EE+ F L A FLGGRVA+RRA+GA L+ VGPI R+ GAPVL G+ GSISHKRHVAVAL++ G +G
Sbjct: 80 FSLPFHGGLCLGVQLP---DALADTALPPELHEEEVAFASDLSQIRAAEFLGGRVAIRRAMGAKLAETVGPIHRSSRGAPVLSNGIRGSISHKRHVAVALVQTGPCSPVG 186
BLAST of mRNA_P-wetherbeei_contig19947.1.1 vs. uniprot
Match: A0A838HLQ8_9BACT (4'-phosphopantetheinyl transferase superfamily protein n=2 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A838HLQ8_9BACT) HSP 1 Score: 77.8 bits (190), Expect = 4.300e-13 Identity = 47/110 (42.73%), Postives = 62/110 (56.36%), Query Frame = 1
Query: 475 FQLTLPMGRCVGIVIPPELDAPGISAAGAELLPEELDFCLQLPLPMRATFLGGRVAMRRALGALSGQVGPILRNPYGAPVLPPGMSGSISHKRHVAVALLRVGDGPHLGM 804
FQ LP G CVG+ +P + G A +L +E LP R T++GGRVA+ RAL Q G IL GAP LPPG++GS+SHK +AVAL+ G +G+
Sbjct: 7 FQRELPHGLCVGVRLPEPSENAG-ELALEQLGADERAHAAGLPFRRRITWVGGRVALHRALERAGQQAGAILATERGAPSLPPGIAGSVSHKEGLAVALVAPAAGWRVGI 115
BLAST of mRNA_P-wetherbeei_contig19947.1.1 vs. uniprot
Match: D0LIL8_HALO1 (Enterobactin synthase component D n=1 Tax=Haliangium ochraceum (strain DSM 14365 / JCM 11303 / SMP-2) TaxID=502025 RepID=D0LIL8_HALO1) HSP 1 Score: 71.6 bits (174), Expect = 8.320e-11 Identity = 45/111 (40.54%), Postives = 60/111 (54.05%), Query Frame = 1
Query: 472 AFQLTLPMGRCVGIVIPPELDAPGISAAGAELLPEELDFCLQLPLPMRATFLGGRVAMRRALGALSGQVGPILRNPYGAPVLPPGMSGSISHKRHVAVALLRVGDGPHLGM 804
AF+ LP G CVG+ IP ++ A LL EE L + T++ GR+A+R AL L GP+L + GAP LP G GSISHK +AVAL +G +G+
Sbjct: 13 AFERELPAGVCVGVAIP-MMEEGDARVAITGLLDEEQRVASALAARRQPTWVAGRLALRAALQRLGASPGPLLVSARGAPTLPEGFVGSISHKADLAVALAARDEGWRVGV 122
BLAST of mRNA_P-wetherbeei_contig19947.1.1 vs. uniprot
Match: A0A2W4IZ52_9PROT (Enterobactin synthase component D n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4IZ52_9PROT) HSP 1 Score: 65.5 bits (158), Expect = 1.110e-8 Identity = 44/114 (38.60%), Postives = 60/114 (52.63%), Query Frame = 1
Query: 448 PSPHGLINAFQLTLPMGRCVGIVIPPELDAPGISAAGAELLPE-ELDFCLQLPLPMRATFLGGRVAMRRALGALSGQVGPILRNPYGAPVLPPGMSGSISHKRHVAVALLRVGD 786
P A + G + +P E GI+ E L E E F L L R ++GGR+A+RRA A ++GP+L + GAPVLPPG+ SISHKR +A AL+ G+
Sbjct: 8 PGAASFAEALVQQVAFGTLAAVALPQE----GIAPEHLEGLHEKERVFALALRGRRRIEWVGGRLALRRAAAARGLELGPVLPSASGAPVLPPGVVASISHKRRLAAALVAEGE 117
BLAST of mRNA_P-wetherbeei_contig19947.1.1 vs. uniprot
Match: A0A7Y5NQZ5_9DELT (Enterobactin synthase component D n=1 Tax=Polyangiaceae bacterium TaxID=2268199 RepID=A0A7Y5NQZ5_9DELT) HSP 1 Score: 63.2 bits (152), Expect = 5.880e-8 Identity = 39/82 (47.56%), Postives = 49/82 (59.76%), Query Frame = 1
Query: 562 ELLPEELDFCLQLPLPMRATFLGGRVAMRRALGALSGQVGPILRNPYGAPVLPPGMSGSISHKRHVAVALLRVG-DGPHLGM 804
EL PEE F L RAT+LGGR+A+RRAL A+ IL + GAP LP + GSISHK +A+AL D H+G+
Sbjct: 21 ELHPEERAFLRGLEGARRATWLGGRIALRRALAAVGVSCDAILADDRGAPHLPARVRGSISHKETIALALATTALDDDHVGV 102
BLAST of mRNA_P-wetherbeei_contig19947.1.1 vs. uniprot
Match: A0A7V8YCY2_9DELT (Enterobactin synthase component D n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V8YCY2_9DELT) HSP 1 Score: 60.1 bits (144), Expect = 7.450e-7 Identity = 39/110 (35.45%), Postives = 55/110 (50.00%), Query Frame = 1
Query: 472 AFQLTLPMGRCVGIVIPPELDAPGISAAGAELLPEELDFCLQLPLPMRATFLGGRVAMRRALGALSGQVGPILRNPYGAPVLPPGMSGSISHKRHVAVALLRVGDGPHLG 801
AF P G + + DA A A L EE + L + F+ GR+A+RRA L + P+L GAP +PPG+SGS+SHKR +A+A++ LG
Sbjct: 7 AFHHAAPHGALTAVHLADSPDAVP-EAVLAALPDEEAELARSLRGYRQGQFVAGRLALRRACEQLGSRPPPLLSTDRGAPAMPPGLSGSVSHKRTLAIAMVASDRAGTLG 115
BLAST of mRNA_P-wetherbeei_contig19947.1.1 vs. uniprot
Match: A0A4P5W281_9DELT (Enterobactin synthase component D n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A4P5W281_9DELT) HSP 1 Score: 59.7 bits (143), Expect = 9.100e-7 Identity = 47/116 (40.52%), Postives = 63/116 (54.31%), Query Frame = 1
Query: 472 AFQLTLPMGRCVGIVIP--PELDAPGISA--AGAELLPEELDFCLQLPLPMRATFLGGRVAMRRALGALSGQVGPILRNPYGAPVLPPGMSGSISHKRHVAVALL---RVGDGPHL 798
AF LP G VG +P P+ P I A GAE E L + F+GGR+A+ A G L + P+L + +GAP+LP G+ GSI+HK+ +AVAL+ RVG G L
Sbjct: 13 AFVYALPHGVAVGYHLPEGPDPVDPEILARLTGAERTHAEA-----LRGYRQVQFVGGRLALAVAFGELGTRRAPVLTDEHGAPILPEGLVGSITHKQDLAVALVARGRVGVGVDL 123
BLAST of mRNA_P-wetherbeei_contig19947.1.1 vs. uniprot
Match: A0A7S1U184_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U184_9STRA) HSP 1 Score: 59.7 bits (143), Expect = 2.180e-6 Identity = 52/148 (35.14%), Postives = 64/148 (43.24%), Query Frame = 1
Query: 457 HGLINAFQLTLPMGRCVGIVIP--------------------PELDAPGISAAG---------AELLPEELDFCLQLPLPMRATFLGGRVAMRRALGALS-GQVGPILRNPYGAPVLPPGMSGSISHKRHVAVALLRVGDGPHLGMLE 810
GL LP GRC G+ +P E G +AA A L EL + + R FL GR+AMRR L A VGPIL++ +GAP LP +SGSISHK VA+AL G G+ E
Sbjct: 53 EGLSEMVNAELPEGRCFGVRLPRPSSITDEVLQAALEAKVAAQEGSGGGAAAAAINGNQVGELACLDAAELHIAMGMSNFERGPFLAGRLAMRRCLEAGGVPPVGPILKDCFGAPTLPQHVSGSISHKTPVALALCAERSGAPSGVRE 200
BLAST of mRNA_P-wetherbeei_contig19947.1.1 vs. uniprot
Match: UPI00047C2692 (4'-phosphopantetheinyl transferase superfamily protein n=1 Tax=Gemmatimonas phototrophica TaxID=1379270 RepID=UPI00047C2692) HSP 1 Score: 58.2 bits (139), Expect = 3.300e-6 Identity = 42/96 (43.75%), Postives = 57/96 (59.38%), Query Frame = 1
Query: 553 AGAELLPEELDFCLQLPLPMRATFLGGRVAMRRALGALS-----GQVGPILRNPYGAPVLPPGMSGSISHKRHVAVALL--RVGDGPHLGM-LEGR 816
AGA L P E LP RATF+ GRVA+R A+ L+ G P+LR GAP+LPP ++GS++HK +A+A + R G H+G+ LE R
Sbjct: 32 AGA-LHPLEASLARSLPAARRATFVAGRVALRDAMAQLADVPLTGNT-PVLRTHRGAPLLPPQITGSVTHKSTLAMAAVAPRQGTLQHVGLDLEHR 125 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19947.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19947.1.1 >prot_P-wetherbeei_contig19947.1.1 ID=prot_P-wetherbeei_contig19947.1.1|Name=mRNA_P-wetherbeei_contig19947.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=222bp MRALAWRTLCANAAFGSSWSPYCGSGAVLSCHRETSTLIAKRGFSGRMYHback to top mRNA from alignment at P-wetherbeei_contig19947:24..1008+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19947.1.1 ID=mRNA_P-wetherbeei_contig19947.1.1|Name=mRNA_P-wetherbeei_contig19947.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=985bp|location=Sequence derived from alignment at P-wetherbeei_contig19947:24..1008+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19947:24..1008+ >mRNA_P-wetherbeei_contig19947.1.1 ID=mRNA_P-wetherbeei_contig19947.1.1|Name=mRNA_P-wetherbeei_contig19947.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=666bp|location=Sequence derived from alignment at P-wetherbeei_contig19947:24..1008+ (Phaeothamnion wetherbeei SAG_119_79)back to top |