mRNA_P-wetherbeei_contig1993.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1993.1.1 vs. uniprot
Match: A0A7S3QM42_DUNTE (Hypothetical protein (Fragment) n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3QM42_DUNTE) HSP 1 Score: 255 bits (652), Expect = 2.560e-78 Identity = 131/223 (58.74%), Postives = 169/223 (75.78%), Query Frame = 1
Query: 46 RELAGHIIAQLVENCMAVLPISLLLVLSMAVFFQRGTSNAGLQAMGLASAIVGLVAFAEGLRVLIMPLGEMVGMRMPQTQSLPAVLAVAGVLGVLVTYSEPAIAAIAPLADLVDKQTAPYLHFALNQKQPLLVFSIGLGVGIASIAGTLMFLQRWSLKPLIAIFLTPTVALACYMHWGMEDLRPMIGLAWDAGGVTTGPVTVPLLLALSIGVAKSEREKRAAQ 714
+ LA H+ Q E +AV+PI+L LV+ MA+FFQR ++ GLQA GL SAI+GL F +GLRV +MPLGE+VG R+P+ LP VL VA LG+L TY+EPAI+++ PLA+ VD+Q APYLHF L +KQ +LV IGLGVG A++ GT F++ WSLKP IA L PTVA ACYMHWG +L+P++GL WD+G VTTGPVTVP+LL++ IGV KS R+KR A+
Sbjct: 35 KALAVHLFNQFYETALAVVPITLHLVICMAIFFQRQSTQPGLQAAGLISAIIGLTLFVDGLRVCVMPLGELVGRRLPEKFPLPIVLIVAFCLGILCTYAEPAISSLRPLAEQVDRQRAPYLHFVLMEKQEILVLCIGLGVGTAAVLGTYRFVKGWSLKPFIAATLAPTVACACYMHWGNAELKPLLGLCWDSGAVTTGPVTVPVLLSMGIGVMKSVRQKRLAK 257
BLAST of mRNA_P-wetherbeei_contig1993.1.1 vs. uniprot
Match: A0A150G5E8_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G5E8_GONPE) HSP 1 Score: 255 bits (652), Expect = 3.440e-77 Identity = 132/214 (61.68%), Postives = 167/214 (78.04%), Query Frame = 1
Query: 73 QLVENCMAVLPISLLLVLSMAVFFQRGTSNAGLQAMGLASAIVGLVAFAEGLRVLIMPLGEMVGMRMPQTQSLPAVLAVAGVLGVLVTYSEPAIAAIAPLADLVDKQTAPYLHFALNQKQPLLVFSIGLGVGIASIAGTLMFLQRWSLKPLIAIFLTPTVALACYMHWGMEDLRPMIGLAWDAGGVTTGPVTVPLLLALSIGVAKSEREKRAAQ 714
QL E +AVLPISLLLV + VFFQ+ T++ G QA GL AI GL+ F +GLRV +MPLGE+VG R+P+ P VL VAG LG+LVTY+EPAIA+++PLA LVDK APYL+FALN+++ +LV SIGLGVG A++ GTL F++ WSLKP+I L PT+ALACYM WG DL P++GLAWD G VTTGPVTVP+LLA+ IGV S+R++R A+
Sbjct: 4 QLKEQILAVLPISLLLVFVIGVFFQKATNSPGQQAYGLVCAIFGLLFFMDGLRVCVMPLGELVGSRLPEKYPTPVVLLVAGCLGILVTYAEPAIASLSPLAQLVDKNKAPYLYFALNEQREMLVLSIGLGVGAAAVVGTLRFIKGWSLKPIIYGSLVPTIALACYMQWGNPDLAPLLGLAWDCGAVTTGPVTVPILLAMGIGVMASKRQQRLAK 217
BLAST of mRNA_P-wetherbeei_contig1993.1.1 vs. uniprot
Match: A0A835Y9L5_9CHLO (Uncharacterized protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A835Y9L5_9CHLO) HSP 1 Score: 257 bits (656), Expect = 9.260e-76 Identity = 135/223 (60.54%), Postives = 168/223 (75.34%), Query Frame = 1
Query: 46 RELAGHIIAQLVENCMAVLPISLLLVLSMAVFFQRGTSNAGLQAMGLASAIVGLVAFAEGLRVLIMPLGEMVGMRMPQTQSLPAVLAVAGVLGVLVTYSEPAIAAIAPLADLVDKQTAPYLHFALNQKQPLLVFSIGLGVGIASIAGTLMFLQRWSLKPLIAIFLTPTVALACYMHWGMEDLRPMIGLAWDAGGVTTGPVTVPLLLALSIGVAKSEREKRAAQ 714
R LA H + QL E AVLPIS LL+ + VFFQ+ T N G A GL AI+GL+ F EGLRV +MPLGEMVG R+P L VL VAG LG+LVTY+EPAI++++PLA LVDK APYL++ALNQ++ +LV SIGLGVG+A++ GTL F++ WSLKP+I L P + LACYM WG DL P++GLAWD G VTTGPVTVP+LLA+ IGV KS+R+KR A+
Sbjct: 51 RMLAFHFLDQLKEQIWAVLPISFLLIFVIGVFFQQSTKNPGQTAYGLLCAILGLMFFMEGLRVCVMPLGEMVGSRLPLKYPLWVVLLVAGCLGILVTYAEPAISSLSPLAQLVDKTKAPYLYYALNQQREMLVLSIGLGVGLAAVVGTLRFVKGWSLKPIIYTSLVPAIGLACYMQWGNPDLSPLLGLAWDCGAVTTGPVTVPILLAMGIGVMKSQRQKRLAK 273
BLAST of mRNA_P-wetherbeei_contig1993.1.1 vs. uniprot
Match: A0A2V0PR65_9CHLO (Uncharacterized protein n=1 Tax=Raphidocelis subcapitata TaxID=307507 RepID=A0A2V0PR65_9CHLO) HSP 1 Score: 247 bits (630), Expect = 4.030e-75 Identity = 129/211 (61.14%), Postives = 163/211 (77.25%), Query Frame = 1
Query: 82 ENCMAVLPISLLLVLSMAVFFQRGTSNAGLQAMGLASAIVGLVAFAEGLRVLIMPLGEMVGMRMPQTQSLPAVLAVAGVLGVLVTYSEPAIAAIAPLADLVDKQTAPYLHFALNQKQPLLVFSIGLGVGIASIAGTLMFLQRWSLKPLIAIFLTPTVALACYMHWGMEDLRPMIGLAWDAGGVTTGPVTVPLLLALSIGVAKSEREKRAAQ 714
+ A++PI+LL VL MAVFFQ+ T L+A+GL SA+VGLV F EGLRV +MP+ +VG ++PQ +LP VL VA LGVLVTYSEPAIAAI PLA LVD APYL+FA+NQ+Q LLVFS+G GVG+A++ TL FLQ WSLKPLIA L PTVA AC+MHWG LRP++G+AWD G VTTGPVTVP+LL+L +GV ++ +++ A+
Sbjct: 49 QQLTAMVPITLLQVLVMAVFFQKATPTPWLEALGLISAVVGLVLFLEGLRVAVMPMALLVGTKLPQRLALPWVLVVAFGLGVLVTYSEPAIAAIRPLAALVDPSAAPYLYFAMNQQQELLVFSVGAGVGVAAVVATLKFLQGWSLKPLIACSLLPTVAAACWMHWGNPHLRPLLGVAWDCGAVTTGPVTVPVLLSLGVGVMRARKQRELAR 259
BLAST of mRNA_P-wetherbeei_contig1993.1.1 vs. uniprot
Match: A0A383VAF8_TETOB (Uncharacterized protein n=2 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VAF8_TETOB) HSP 1 Score: 246 bits (627), Expect = 6.350e-75 Identity = 131/235 (55.74%), Postives = 174/235 (74.04%), Query Frame = 1
Query: 7 DRFLIRRNVSSHGRELAGHIIAQLVENCMAVLPISLLLVLSMAVFFQRGTSNAGLQAMGLASAIVGLVAFAEGLRVLIMPLGEMVGMRMPQTQSLPAVLAVAGVLGVLVTYSEPAIAAIAPLADLVDKQTAPYLHFALNQKQPLLVFSIGLGVGIASIAGTLMFLQRWSLKPLIAIFLTPTVALACYMHWGMEDLRPMIGLAWDAGGVTTGPVTVPLLLALSIGVAKSEREKRAA 711
D ++I + +S R L H L E MA+LPI++L VL MA+FF++GT GL+A GL SA+VGLV F +GLRV +MP+ +VG ++PQ LP VL VA LGVLVTY+EPAIAAI PLA LVD +APYL++ +NQ+Q ++VF+IG GVG+A++ GTL FL SLK LIA+ L PTVA ACYM WG L+P++G+AWD G VTTGPVTVP+LLAL +GV +++++K+ A
Sbjct: 24 DGWMIAKGWTSKTRGLVWHYSNLLKEQLMAMLPITMLQVLVMAIFFRKGTPTPGLEAAGLISAVVGLVLFLDGLRVAVMPMAMLVGTKLPQKLKLPWVLLVAFCLGVLVTYAEPAIAAIRPLAALVDPNSAPYLYYMMNQQQEIMVFAIGAGVGVAAVIGTLKFLYSISLKILIAVTLAPTVACACYMQWGNRHLQPLMGVAWDCGAVTTGPVTVPVLLALGVGVMQAQKQKKMA 258
BLAST of mRNA_P-wetherbeei_contig1993.1.1 vs. uniprot
Match: A0A2K3D0W3_CHLRE (Uncharacterized protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3D0W3_CHLRE) HSP 1 Score: 253 bits (646), Expect = 8.250e-75 Identity = 133/223 (59.64%), Postives = 167/223 (74.89%), Query Frame = 1
Query: 46 RELAGHIIAQLVENCMAVLPISLLLVLSMAVFFQRGTSNAGLQAMGLASAIVGLVAFAEGLRVLIMPLGEMVGMRMPQTQSLPAVLAVAGVLGVLVTYSEPAIAAIAPLADLVDKQTAPYLHFALNQKQPLLVFSIGLGVGIASIAGTLMFLQRWSLKPLIAIFLTPTVALACYMHWGMEDLRPMIGLAWDAGGVTTGPVTVPLLLALSIGVAKSEREKRAAQ 714
R L H++ QL E MA+LPIS LL+ + FFQ+ T++ G QA GL AI GL+ F EGLRV IMPLGEMVG R+P L VL VAG LG+LVTY+EPAI+++ PLA LVDK APYL++ALN ++ +LV SIGLGVG+A++ GTL F++ W LKP+I L PT+ LACYM WG DL P++GLAWD GGVTTGPVTVP+LLA+ IGV S+R+KR A+
Sbjct: 44 RLLVFHMLDQLKEQIMAILPISFLLIFVIGAFFQQTTNSPGQQAFGLVCAIFGLLFFMEGLRVCIMPLGEMVGRRLPMKYPLWVVLVVAGGLGILVTYAEPAISSLTPLAKLVDKTKAPYLYYALNDQREMLVLSIGLGVGMAAVIGTLRFVKGWPLKPIIYASLCPTIGLACYMQWGNPDLAPLLGLAWDCGGVTTGPVTVPILLAMGIGVMSSQRQKRLAK 266
BLAST of mRNA_P-wetherbeei_contig1993.1.1 vs. uniprot
Match: A0A835WA07_CHLIN (Uncharacterized protein n=1 Tax=Chlamydomonas incerta TaxID=51695 RepID=A0A835WA07_CHLIN) HSP 1 Score: 249 bits (636), Expect = 2.270e-73 Identity = 132/223 (59.19%), Postives = 166/223 (74.44%), Query Frame = 1
Query: 46 RELAGHIIAQLVENCMAVLPISLLLVLSMAVFFQRGTSNAGLQAMGLASAIVGLVAFAEGLRVLIMPLGEMVGMRMPQTQSLPAVLAVAGVLGVLVTYSEPAIAAIAPLADLVDKQTAPYLHFALNQKQPLLVFSIGLGVGIASIAGTLMFLQRWSLKPLIAIFLTPTVALACYMHWGMEDLRPMIGLAWDAGGVTTGPVTVPLLLALSIGVAKSEREKRAAQ 714
R L H++ QL E MA+LPIS LL+ + VFFQ+ T+ G A GL AI GL+ F EGLRV IMPLGEMVG R+P L VL VAG LG+LVTY+EPAI+++ PLA LVDK APYL++ALN ++ +LV SIGLGVG+A++ GTL F++ W LKP+I L PT+ +ACYM WG DL P++GLAWD GGVTTGPVTVP+LLA+ IGV S+R+KR A+
Sbjct: 42 RLLVFHMLDQLKEQIMAILPISFLLIFVIGVFFQQPTNAPGETAFGLVCAIFGLLFFMEGLRVCIMPLGEMVGRRLPMKYPLWVVLMVAGGLGILVTYAEPAISSLTPLAKLVDKTKAPYLYYALNDQREMLVLSIGLGVGLAAVIGTLRFVKGWPLKPIIYASLLPTIGMACYMQWGNPDLAPLLGLAWDCGGVTTGPVTVPILLAMGIGVMGSQRQKRLAK 264
BLAST of mRNA_P-wetherbeei_contig1993.1.1 vs. uniprot
Match: A0A7S0R4P2_9CHLO (Hypothetical protein n=2 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0R4P2_9CHLO) HSP 1 Score: 246 bits (627), Expect = 1.150e-72 Identity = 129/224 (57.59%), Postives = 166/224 (74.11%), Query Frame = 1
Query: 43 GRELAGHIIAQLVENCMAVLPISLLLVLSMAVFFQRGTSNAGLQAMGLASAIVGLVAFAEGLRVLIMPLGEMVGMRMPQTQSLPAVLAVAGVLGVLVTYSEPAIAAIAPLADLVDKQTAPYLHFALNQKQPLLVFSIGLGVGIASIAGTLMFLQRWSLKPLIAIFLTPTVALACYMHWGMEDLRPMIGLAWDAGGVTTGPVTVPLLLALSIGVAKSEREKRAAQ 714
G+ L H I QL E +AV+PISL LVL + +FFQ + G+ GL AIVGL+ F +GLR+ +MPLGE+VG +P+ LP VL VA LG+LVTY+EPAI+A+ PLA+LVDK+ APYL++ LN +Q +LV IGLGVG A++ GTL F++ WSLKPLIA L P +A +C+M WG DL+P+IGLAWD GGVTTGPVTVP+LLA+ IGV S R+KR A+
Sbjct: 26 GQALFWHYIDQLWEQAVAVVPISLWLVLCLGIFFQVQANQGGILTGGLLGAIVGLMLFVDGLRICVMPLGELVGKTLPEKYPLPVVLLVAFGLGILVTYAEPAISALRPLAELVDKRRAPYLYYVLNDQQEILVLCIGLGVGAAAVLGTLRFVKGWSLKPLIACTLLPNIACSCWMQWGNPDLKPLIGLAWDCGGVTTGPVTVPILLAVGIGVMTSVRQKRLAE 249
BLAST of mRNA_P-wetherbeei_contig1993.1.1 vs. uniprot
Match: A0A150G5J6_GONPE (Uncharacterized protein n=1 Tax=Gonium pectorale TaxID=33097 RepID=A0A150G5J6_GONPE) HSP 1 Score: 237 bits (604), Expect = 7.660e-71 Identity = 125/214 (58.41%), Postives = 160/214 (74.77%), Query Frame = 1
Query: 73 QLVENCMAVLPISLLLVLSMAVFFQRGTSNAGLQAMGLASAIVGLVAFAEGLRVLIMPLGEMVGMRMPQTQSLPAVLAVAGVLGVLVTYSEPAIAAIAPLADLVDKQTAPYLHFALNQKQPLLVFSIGLGVGIASIAGTLMFLQRWSLKPLIAIFLTPTVALACYMHWGMEDLRPMIGLAWDAGGVTTGPVTVPLLLALSIGVAKSEREKRAAQ 714
QL E +AVLPIS LL+ + VFFQ+ T+N G QA GL AI GL+ F +GLRV +MPLGE+VG R+P+ P VL VAG LG+LVTY+EPAIA+++PLA LVDK APYL+FALN+++ +LV SIGLGVG A++ GTL F++ + L PT+ALACYM WG DL P++GLAWD G VTTGPVTVP+LLA+ IGV S+R++R A+
Sbjct: 4 QLKEQILAVLPISFLLIFVIGVFFQKTTNNPGQQAYGLVCAIFGLLFFMDGLRVCVMPLGELVGSRLPEKYPTPVVLLVAGCLGILVTYAEPAIASLSPLAQLVDKNKAPYLYFALNEQREMLVLSIGLGVGAAAVVGTLRFMRGYG-------SLVPTIALACYMQWGNPDLAPLLGLAWDCGAVTTGPVTVPILLAMGIGVMGSKRQQRLAE 210
BLAST of mRNA_P-wetherbeei_contig1993.1.1 vs. uniprot
Match: A0A7S1H9K5_HEMAN (Hypothetical protein (Fragment) n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H9K5_HEMAN) HSP 1 Score: 226 bits (576), Expect = 1.610e-68 Identity = 120/235 (51.06%), Postives = 163/235 (69.36%), Query Frame = 1
Query: 4 IDRFLIRRNVSSHGRELAGHIIAQLVENCMAVLPISLLLVLSMAVFFQRGTSNAGLQAMGLASAIVGLVAFAEGLRVLIMPLGEMVGMRMPQTQSLPAVLAVAGVLGVLVTYSEPAIAAIAPLADLVDKQTAPYLHFALNQKQPLLVFSIGLGVGIASIAGTLMFLQRWSLKPLIAIFLTPTVALACYMHWGMEDLRPMIGLAWDAGGVTTGPVTVPLLLALSIGVAKSEREKRA 708
I L++R L + I +++ C A+LPI+++LV++MA++FQR N G G AI GL F + LRV +MPLGE +G +P+ L VLA LGVLVTY+EPAI+++ PLA LVD + APYL+ ALNQ+Q LL+F+I LGV A++ GTL F++ W L+PLI +TPT+ALA YM WG DL+P++GLAWD+G VTTGPVTVP+LLAL IGV +++ EK A
Sbjct: 6 ISEALLKRGWRHRTALLVEYYIDLIMQQCAAILPITIMLVVTMAIYFQRSPKNPGELVGGTVCAIFGLSMFMDSLRVSVMPLGERLGRDLPKHVPLAGVLATTAFLGVLVTYAEPAISSLRPLARLVDPEVAPYLYLALNQQQELLIFAIALGVACAAMVGTLRFVKGWPLRPLIISVITPTLALAAYMWWGNPDLKPLLGLAWDSGAVTTGPVTVPVLLALGIGVMRTKNEKEA 240 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1993.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1993.1.1 >prot_P-wetherbeei_contig1993.1.1 ID=prot_P-wetherbeei_contig1993.1.1|Name=mRNA_P-wetherbeei_contig1993.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=238bp MIDRFLIRRNVSSHGRELAGHIIAQLVENCMAVLPISLLLVLSMAVFFQRback to top mRNA from alignment at P-wetherbeei_contig1993:610..2433- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1993.1.1 ID=mRNA_P-wetherbeei_contig1993.1.1|Name=mRNA_P-wetherbeei_contig1993.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1824bp|location=Sequence derived from alignment at P-wetherbeei_contig1993:610..2433- (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1993:610..2433- >mRNA_P-wetherbeei_contig1993.1.1 ID=mRNA_P-wetherbeei_contig1993.1.1|Name=mRNA_P-wetherbeei_contig1993.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=714bp|location=Sequence derived from alignment at P-wetherbeei_contig1993:610..2433- (Phaeothamnion wetherbeei SAG_119_79)back to top |