mRNA_P-wetherbeei_contig19906.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19906.1.1
Unique NamemRNA_P-wetherbeei_contig19906.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig19906.1.1 vs. uniprot
Match: A0A2P6NY01_9EUKA (Carboxypeptidase n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NY01_9EUKA)

HSP 1 Score: 183 bits (465), Expect = 4.400e-53
Identity = 84/167 (50.30%), Postives = 122/167 (73.05%), Query Frame = 1
Query:    1 NDANHAGFVSVRFGTV----HLFYHLFESRNDPATDPVIVWFSGGPGCSSSLALFGENGPYSITDDLQLQNNPHSWSSVATVVWVDQPAGTGFSHGM----LAPTEDIIAEDVWDMLQGIMSAFPQYVERDLYLFGESYAGHYVPVISHRVVEKNAKLAGQSSRFSL 477
            N   HAG+++V  GT+    ++FY +FESRNDP+TDPV++WF+GGPGCSS +ALF ENGPYSI  DL L+ NP+SW+S AT+++VDQP GTGFS+G     +   ED +A D+++ LQ +   +PQY +   Y+ GESYAGHY+P +S+++ ++N K  GQ+ + +L
Sbjct:   58 NVTQHAGYIAVN-GTLGYKTNIFYWMFESRNDPSTDPVVIWFTGGPGCSSEIALFYENGPYSINKDLGLKINPYSWNSFATIIYVDQPVGTGFSYGEGLLDIDINEDQVARDMYEFLQNLFEKYPQYSKLPFYVTGESYAGHYIPAVSYKIYQENEK--GQNPKINL 221          
BLAST of mRNA_P-wetherbeei_contig19906.1.1 vs. uniprot
Match: A0A7S0DMN9_9EUKA (Carboxypeptidase n=2 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DMN9_9EUKA)

HSP 1 Score: 179 bits (453), Expect = 1.970e-51
Identity = 81/152 (53.29%), Postives = 101/152 (66.45%), Query Frame = 1
Query:   10 NHAGFVSVRFGTVHLFYHLFESRNDPATDPVIVWFSGGPGCSSSLALFGENGPYSIT----------DDLQLQNNPHSWSSVATVVWVDQPAGTGFSHGMLAPTEDIIAEDVWDMLQGIMSAFPQYVERDLYLFGESYAGHYVPVISHRVVE 435
            N AG++ V  GT  LFY  FESR DPATDP I+W SGGPGCSS LA+F ENGPY ++          D   L  N  SW+  ATV+W+DQPAG GFS+G+    ED++A D+WD L G    +P+Y + D +LFGESYAGHYVP  + R+VE
Sbjct:   30 NDAGYIPVALGTKQLFYWFFESRGDPATDPFIIWMSGGPGCSSQLAMFAENGPYKVSKFADNGTSSADKYNLDLNEFSWNERATVLWIDQPAGAGFSYGLPDFNEDMVANDMWDFLMGFFEKYPKYQKLDFHLFGESYAGHYVPATAARIVE 181          
BLAST of mRNA_P-wetherbeei_contig19906.1.1 vs. uniprot
Match: A0A7S3Z4X4_9EUKA (Carboxypeptidase n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3Z4X4_9EUKA)

HSP 1 Score: 172 bits (436), Expect = 3.510e-51
Identity = 81/163 (49.69%), Postives = 106/163 (65.03%), Query Frame = 1
Query:    1 NDANHAGFVSVRFGTVHLFYHLFESRNDPATDPVIVWFSGGPGCSSSLALFGENGPYSITD----DLQLQNNPHSWSSVATVVWVDQPAGTGFSHGMLAPTEDIIAEDVWDMLQGIMSAFPQYVERDLYLFGESYAGHYVPVISHRVVEKNAKLAGQSSRFSL 477
            N  N AG++ V  GT  LFY  FESRNDP TDP I+W SGGPGCSS LA+F ENGPY +      +L L  N  SW+S ATV+W+DQPAG GFS+G+    E  +A D+W  L G    +P+Y   DL++FGESYAGHYVP  + ++++  A   G+ +  S+
Sbjct:   26 NVFNDAGYIPVASGTKELFYWFFESRNDPTTDPFIIWMSGGPGCSSQLAMFAENGPYHVNKKAGGELYLTLNEFSWNSNATVLWIDQPAGAGFSYGVPDFGEKGVANDMWSFLMGFYKKYPKYQGLDLHIFGESYAGHYVPATAAKIIDNIAAGMGEVNLKSI 188          
BLAST of mRNA_P-wetherbeei_contig19906.1.1 vs. uniprot
Match: A0A7S2X6T4_9EUKA (Carboxypeptidase n=2 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2X6T4_9EUKA)

HSP 1 Score: 175 bits (444), Expect = 3.970e-50
Identity = 82/154 (53.25%), Postives = 102/154 (66.23%), Query Frame = 1
Query:   10 NHAGFVSVRFGTVHLFYHLFESRNDPATDPVIVWFSGGPGCSSSLALFGENGPYSITD----DLQLQNNPHSWSSVATVVWVDQPAGTGFSHGMLAPTEDIIAEDVWDMLQGIMSAFPQYVERDLYLFGESYAGHYVPVISHRVVEKNAKLAGQ 459
            N AG+VSV  GT  LFY  FESRNDPA DP I+W SGGPGCSS LA+F ENGPY +      +L L  N  SW+S ATV+W+DQPAG GFS G+    E  +A D+WD L G    +P+Y   DL++FGESYAGHYVP  + +++E      G+
Sbjct:   36 NDAGYVSVASGTKKLFYWFFESRNDPANDPFIIWMSGGPGCSSQLAMFAENGPYQVNKKAGGELYLTLNEFSWNSNATVLWIDQPAGAGFSTGIPDFGEKGVANDMWDFLMGFYKKYPKYQSLDLHIFGESYAGHYVPATAAKIIENTGAGKGE 189          
BLAST of mRNA_P-wetherbeei_contig19906.1.1 vs. uniprot
Match: A0A6V3QA45_9EUKA (Carboxypeptidase n=2 Tax=Lotharella globosa TaxID=91324 RepID=A0A6V3QA45_9EUKA)

HSP 1 Score: 172 bits (436), Expect = 6.840e-49
Identity = 81/163 (49.69%), Postives = 106/163 (65.03%), Query Frame = 1
Query:    1 NDANHAGFVSVRFGTVHLFYHLFESRNDPATDPVIVWFSGGPGCSSSLALFGENGPYSITD----DLQLQNNPHSWSSVATVVWVDQPAGTGFSHGMLAPTEDIIAEDVWDMLQGIMSAFPQYVERDLYLFGESYAGHYVPVISHRVVEKNAKLAGQSSRFSL 477
            N  N AG++ V  GT  LFY  FESRNDP TDP I+W SGGPGCSS LA+F ENGPY +      +L L  N  SW+S ATV+W+DQPAG GFS+G+    E  +A D+W  L G    +P+Y   DL++FGESYAGHYVP  + ++++  A   G+ +  S+
Sbjct:   26 NVFNDAGYIPVASGTKELFYWFFESRNDPTTDPFIIWMSGGPGCSSQLAMFAENGPYHVNKKAGGELYLTLNEFSWNSNATVLWIDQPAGAGFSYGVPDFGEKGVANDMWSFLMGFYKKYPKYQGLDLHIFGESYAGHYVPATAAKIIDNIAAGMGEVNLKSI 188          
BLAST of mRNA_P-wetherbeei_contig19906.1.1 vs. uniprot
Match: A0A662WIH4_9STRA (Carboxypeptidase (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WIH4_9STRA)

HSP 1 Score: 155 bits (393), Expect = 3.340e-45
Identity = 70/134 (52.24%), Postives = 92/134 (68.66%), Query Frame = 1
Query:   55 FYHLFESRNDPATDPVIVWFSGGPGCSSSLALFGENGPYSITDDLQLQNNPHSWSSVATVVWVDQPAGTGFSHGMLAP---TEDIIAEDVWDMLQGIMSAFPQYVERDLYLFGESYAGHYVPVISHRVVEKNAK 447
            FY  FESR  P+TDPVI+W +GGPGCSS LAL  ENGP S+ DDL L+ NP +W+  A V+W+DQP G GFS+G ++     E  + +D++  LQ    A P+Y ++  ++FGESYAGHYVP ISHR+   N K
Sbjct:   64 FYWFFESRGTPSTDPVIIWLTGGPGCSSILALLQENGPCSVNDDLSLKRNPFAWNERANVMWIDQPVGVGFSYGDVSEYDTDETQVGDDMFHFLQEFFQARPEYQKQPFFVFGESYAGHYVPAISHRIFTGNQK 197          
BLAST of mRNA_P-wetherbeei_contig19906.1.1 vs. uniprot
Match: L8GMG2_ACACA (Carboxypeptidase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GMG2_ACACA)

HSP 1 Score: 162 bits (411), Expect = 3.380e-45
Identity = 75/160 (46.88%), Postives = 109/160 (68.12%), Query Frame = 1
Query:    1 NDANHAGFVSVRFGT----VHLFYHLFESRNDPATDPVIVWFSGGPGCSSSLALFGENGPYSITDDLQLQNNPHSWSSVATVVWVDQPAGTGFSHGMLA----PTEDIIAEDVWDMLQGIMSAFPQYVERDLYLFGESYAGHYVPVISHRVVEKNAKLAG 456
            N   H+G++++  GT     HLF+ +FESR+ P+TDP+IVW +GGPGCSS LALF ENGP+S+  +L L+ NP+SW+S A ++++DQP GTGFS+   A     TE++IA+D++  +Q     +PQY +   Y+ GESYAGHYVP  ++R +  N    G
Sbjct:   44 NVTQHSGYITIN-GTYANGTHLFFWMFESRSKPSTDPLIVWLTGGPGCSSLLALFTENGPFSVEQNLSLKRNPYSWNSFANLLYIDQPVGTGFSYADSALDYETTEEVIAQDLYVFMQNFFLMYPQYNKLPFYIMGESYAGHYVPAFAYRTLVGNQNRDG 202          
BLAST of mRNA_P-wetherbeei_contig19906.1.1 vs. uniprot
Match: A0A662WIK1_9STRA (Carboxypeptidase (Fragment) n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WIK1_9STRA)

HSP 1 Score: 157 bits (397), Expect = 3.610e-45
Identity = 71/137 (51.82%), Postives = 93/137 (67.88%), Query Frame = 1
Query:   55 FYHLFESRNDPATDPVIVWFSGGPGCSSSLALFGENGPYSITDDLQLQNNPHSWSSVATVVWVDQPAGTGFSHGMLAP---TEDIIAEDVWDMLQGIMSAFPQYVERDLYLFGESYAGHYVPVISHRVVEKNAKLAG 456
            FY  FESR  P+TDPV++W +GGPGCSS LAL  ENGP S+ DDL L+ NP SW+  A V+W+DQP G GFS+G ++     E  + +D++  LQ    A P+Y ++  ++FGESYAGHYVP ISHR+   N K  G
Sbjct:   70 FYWFFESRGTPSTDPVVIWLTGGPGCSSILALLQENGPCSVNDDLSLKRNPFSWNERANVMWIDQPVGVGFSYGDVSEYDTDETQVGDDMFHFLQEFFQARPEYQKQPFFVFGESYAGHYVPAISHRIFTGNQKEEG 206          
BLAST of mRNA_P-wetherbeei_contig19906.1.1 vs. uniprot
Match: Q22DT8_TETTS (Carboxypeptidase n=1 Tax=Tetrahymena thermophila (strain SB210) TaxID=312017 RepID=Q22DT8_TETTS)

HSP 1 Score: 161 bits (408), Expect = 4.270e-45
Identity = 75/154 (48.70%), Postives = 108/154 (70.13%), Query Frame = 1
Query:    1 NDANHAGFVSVRFGTVHLFYHLFESRNDPATDPVIVWFSGGPGCSSSLALFGENGPYSITDDLQLQNNPHSWSSVATVVWVDQPAGTGFSH---GMLAPTEDIIAEDVWDMLQGIMSAFPQYVERDLYLFGESYAGHYVPVISHRVV-EKNAKL 450
            N+  + GF+SV   +  LFY L ESR++P+TDP+++W +GGPGCSS L LF ENGP+ I +D  L++NP SW+S A +++VDQP GTG+SH   G LA TE+ +++D +  L      +PQY+ RD Y+ GESYAG Y+P IS +++ EKN  +
Sbjct:   24 NETYYPGFISVNEKS-DLFYILLESRSNPSTDPLVLWLNGGPGCSSLLGLFEENGPFKINEDATLRSNPFSWNSNANLIYVDQPVGTGYSHAGHGDLAKTEEQVSKDFYSFLTQFFDKYPQYLGRDFYITGESYAGQYIPAISQKILKEKNPNI 176          
BLAST of mRNA_P-wetherbeei_contig19906.1.1 vs. uniprot
Match: A0A6G0W799_9STRA (Carboxypeptidase n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0W799_9STRA)

HSP 1 Score: 163 bits (412), Expect = 4.440e-45
Identity = 68/132 (51.52%), Postives = 94/132 (71.21%), Query Frame = 1
Query:   55 FYHLFESRNDPATDPVIVWFSGGPGCSSSLALFGENGPYSITDDLQLQNNPHSWSSVATVVWVDQPAGTGFSHGMLAP---TEDIIAEDVWDMLQGIMSAFPQYVERDLYLFGESYAGHYVPVISHRVVEKN 441
            FY  FESRNDPA  P ++W +GGPGCSS LAL  ENGP S+ DDL L++NP+SW+  A ++W+DQPAG GFS+G ++     E+++  D++  LQ      P+Y + D Y+FGESYAGHYVP ++HR+ + N
Sbjct:   71 FYWFFESRNDPANAPFVIWLTGGPGCSSMLALLVENGPCSVNDDLTLKSNPYSWNEKANIMWIDQPAGVGFSYGDMSEYDTNEEMVGNDMYHFLQEFFQTHPEYAKNDFYVFGESYAGHYVPAVAHRIYKGN 202          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19906.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2P6NY01_9EUKA4.400e-5350.30Carboxypeptidase n=1 Tax=Planoprotostelium fungivo... [more]
A0A7S0DMN9_9EUKA1.970e-5153.29Carboxypeptidase n=2 Tax=Amorphochlora amoebiformi... [more]
A0A7S3Z4X4_9EUKA3.510e-5149.69Carboxypeptidase n=1 Tax=Lotharella globosa TaxID=... [more]
A0A7S2X6T4_9EUKA3.970e-5053.25Carboxypeptidase n=2 Tax=Lotharella oceanica TaxID... [more]
A0A6V3QA45_9EUKA6.840e-4949.69Carboxypeptidase n=2 Tax=Lotharella globosa TaxID=... [more]
A0A662WIH4_9STRA3.340e-4552.24Carboxypeptidase (Fragment) n=1 Tax=Nothophytophth... [more]
L8GMG2_ACACA3.380e-4546.88Carboxypeptidase n=1 Tax=Acanthamoeba castellanii ... [more]
A0A662WIK1_9STRA3.610e-4551.82Carboxypeptidase (Fragment) n=1 Tax=Nothophytophth... [more]
Q22DT8_TETTS4.270e-4548.70Carboxypeptidase n=1 Tax=Tetrahymena thermophila (... [more]
A0A6G0W799_9STRA4.440e-4551.52Carboxypeptidase n=1 Tax=Aphanomyces euteiches Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19906contigP-wetherbeei_contig19906:289..1174 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog227086.JGI_V11_90485
PFAMsPeptidase_S10
Model size477
Max annot lvl2759|Eukaryota
KEGG koko:K09645,ko:K13289,ko:K16298
KEGG Pathwayko04142,ko04614,map04142,map04614
Hectar predicted targeting categoryother localisation
Exons3
Evalue6.28e-50
EggNOG OGsCOG2939@1|root,KOG1282@2759|Eukaryota
EC3.4.16.5
Descriptionserine-type carboxypeptidase activity
Cds size477
COG categoryE
BRITEko00000,ko00001,ko01000,ko01002,ko03110,ko04131,ko04147
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186184.8005986-CDS-P-wetherbeei_contig19906:288..5131683186184.8005986-CDS-P-wetherbeei_contig19906:288..513Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19906 289..513 -
1683186184.809626-CDS-P-wetherbeei_contig19906:750..8961683186184.809626-CDS-P-wetherbeei_contig19906:750..896Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19906 751..896 -
1683186184.8172545-CDS-P-wetherbeei_contig19906:1068..11741683186184.8172545-CDS-P-wetherbeei_contig19906:1068..1174Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19906 1069..1174 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19906.1.1prot_P-wetherbeei_contig19906.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19906 289..1174 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19906.1.1

>prot_P-wetherbeei_contig19906.1.1 ID=prot_P-wetherbeei_contig19906.1.1|Name=mRNA_P-wetherbeei_contig19906.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=159bp
NDANHAGFVSVRFGTVHLFYHLFESRNDPATDPVIVWFSGGPGCSSSLAL
FGENGPYSITDDLQLQNNPHSWSSVATVVWVDQPAGTGFSHGMLAPTEDI
IAEDVWDMLQGIMSAFPQYVERDLYLFGESYAGHYVPVISHRVVEKNAKL
AGQSSRFSL
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mRNA from alignment at P-wetherbeei_contig19906:289..1174-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19906.1.1 ID=mRNA_P-wetherbeei_contig19906.1.1|Name=mRNA_P-wetherbeei_contig19906.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=886bp|location=Sequence derived from alignment at P-wetherbeei_contig19906:289..1174- (Phaeothamnion wetherbeei SAG_119_79)
AACGACGCGAATCACGCTGGATTCGTGAGCGTTCGCTTCGGCACCGTGCA CCTCTTTTACCACCTGTTCGAGAGCCGGAACGACCCCGCGACCGATCCTG TCATTGGTGAGCTTTGAAGGAAGGAAATACAAGACTGTATCTTGTTACTT TCCGTTCGGCCCTGTGGCCGCGACCTGTCTTTATGTACGTGCTAAAACGC CCTCGCCGGCGCCGCGTGCGCCAACTCTTTCGCTTTTGACTTTCCTGCTC CTTGTCCCTTCTCTTCTCCCCTCACCAGTCTGGTTCAGCGGCGGCCCAGG CTGCAGCAGCTCGCTCGCACTCTTCGGCGAGAACGGGCCCTACTCAATTA CCGACGACCTCCAGCTGCAGAACAACCCGCACAGCTGGAGCTCCGTCGCG ACGGTCGTATGGGTTGACCAGCCGGTACGTTTGCACATTTCCATTTTTCC TCGTCGTAATGGAGGGGATGTCTGCGGAAAGAAAGAGTTTAAAGGCATCA AAAGCAAGATGTGCGACACAAACGAAAAGAGGTAAAAGAAGACAGGCGGC GTGACAGTCCATATGCCCTGCCCATTCCTTCGACACACATTAGTGCCGAA ATTCCCTCACCCCTCCTCTTTCTCTTCGAACAAAAAAAAAATGCAAGCGC CTGTGCTGCAGGCCGGGACGGGCTTCTCTCACGGGATGCTCGCCCCGACC GAAGACATCATCGCTGAGGACGTCTGGGACATGCTGCAGGGCATCATGTC GGCCTTCCCGCAGTACGTCGAACGCGACCTCTATCTGTTCGGCGAGAGCT ACGCCGGTCACTACGTCCCGGTCATCTCGCACCGCGTCGTGGAGAAGAAT GCGAAGCTTGCAGGTCAGTCCAGTCGATTCTCGCTG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig19906:289..1174-

>mRNA_P-wetherbeei_contig19906.1.1 ID=mRNA_P-wetherbeei_contig19906.1.1|Name=mRNA_P-wetherbeei_contig19906.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=477bp|location=Sequence derived from alignment at P-wetherbeei_contig19906:289..1174- (Phaeothamnion wetherbeei SAG_119_79)
AACGACGCGAATCACGCTGGATTCGTGAGCGTTCGCTTCGGCACCGTGCA
CCTCTTTTACCACCTGTTCGAGAGCCGGAACGACCCCGCGACCGATCCTG
TCATTGTCTGGTTCAGCGGCGGCCCAGGCTGCAGCAGCTCGCTCGCACTC
TTCGGCGAGAACGGGCCCTACTCAATTACCGACGACCTCCAGCTGCAGAA
CAACCCGCACAGCTGGAGCTCCGTCGCGACGGTCGTATGGGTTGACCAGC
CGGCCGGGACGGGCTTCTCTCACGGGATGCTCGCCCCGACCGAAGACATC
ATCGCTGAGGACGTCTGGGACATGCTGCAGGGCATCATGTCGGCCTTCCC
GCAGTACGTCGAACGCGACCTCTATCTGTTCGGCGAGAGCTACGCCGGTC
ACTACGTCCCGGTCATCTCGCACCGCGTCGTGGAGAAGAATGCGAAGCTT
GCAGGTCAGTCCAGTCGATTCTCGCTG
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