mRNA_P-wetherbeei_contig19888.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19888.1.1 vs. uniprot
Match: A0A1F4AX73_9PROT (Phosphoribosylglycinamide formyltransferase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_66_14 TaxID=1797490 RepID=A0A1F4AX73_9PROT) HSP 1 Score: 279 bits (714), Expect = 4.320e-90 Identity = 141/206 (68.45%), Postives = 170/206 (82.52%), Query Frame = 1
Query: 1 MSLVILISGRGSNMQAILDAGLPVAAVVSNRRDAAGLAVAAARGVSTAVIEHKEYGTREGFDAALAAEIDRHAPKAVALAGFMRILTPRFVGRFAGRLVNIHPSLLPSFAGLDTHERALAAGVKLHGCTVHFVTAELDHGPIVAQAAVPVLPGDTPDALAARVLRQEHLLYPRALGWLLAGQLVIDNGIVRVKDPDAQQLAYSDRP 618
MS+V+L+SGRGSNMQA+LDAG+PV+AV+SNR A L +AA RG++TAV+EH+ + TRE FDAALAAE++R+ P+ V LAGFMRIL FV RFAGR++NIHPSLLP+F GLDTHERALAAGVK+HGCTVHFVTA+LDHGPIV QA VPVLPGD PD LAARVL QEH+++ RA+ W L +LVI+ G V VK DAQ L +D P
Sbjct: 1 MSVVVLVSGRGSNMQALLDAGIPVSAVISNRAGARALEIAAKRGIATAVVEHRSFPTREAFDAALAAEVERYQPRLVVLAGFMRILGAAFVARFAGRMMNIHPSLLPAFPGLDTHERALAAGVKVHGCTVHFVTADLDHGPIVVQAVVPVLPGDDPDRLAARVLAQEHIVFARAVNWFLEDRLVIEKGRVSVKGNDAQ-LVIADLP 205
BLAST of mRNA_P-wetherbeei_contig19888.1.1 vs. uniprot
Match: A0A1F4EFM5_9PROT (Phosphoribosylglycinamide formyltransferase n=2 Tax=unclassified Betaproteobacteria TaxID=33809 RepID=A0A1F4EFM5_9PROT) HSP 1 Score: 278 bits (710), Expect = 1.740e-89 Identity = 143/206 (69.42%), Postives = 171/206 (83.01%), Query Frame = 1
Query: 1 MSLVILISGRGSNMQAILDAGLPVAAVVSNRRDAAGLAVAAARGVSTAVIEHKEYGTREGFDAALAAEIDRHAPKAVALAGFMRILTPRFVGRFAGRLVNIHPSLLPSFAGLDTHERALAAGVKLHGCTVHFVTAELDHGPIVAQAAVPVLPGDTPDALAARVLRQEHLLYPRALGWLLAGQLVIDNGIVRVKDPDAQQLAYSDRP 618
MS+VILISGRGSN+QA+L+AG+PV+AV+SNR A GLA+AA V+ V+EH+ Y +RE FDAALAA+I+R AP+ V LAGFMRILTP FV R+AGRL+N+HPSLLP+F GLDTH RALAAGVKLHGCTVHFVTA+LDHGPIVAQAAVPVL DTP LAARVL QEH++YP A+ W L +LV++ G VRVK DAQ L ++ RP
Sbjct: 1 MSVVILISGRGSNLQALLEAGVPVSAVISNRAGAPGLAIAARHAVAIRVVEHEAYASREDFDAALAAQIERFAPRLVVLAGFMRILTPAFVARYAGRLMNVHPSLLPAFPGLDTHARALAAGVKLHGCTVHFVTADLDHGPIVAQAAVPVLADDTPGTLAARVLAQEHVVYPAAVRWYLEDRLVVEEGRVRVKGNDAQ-LVFAARP 205
BLAST of mRNA_P-wetherbeei_contig19888.1.1 vs. uniprot
Match: A0A521VGS2_9PROT (Phosphoribosylglycinamide formyltransferase n=3 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521VGS2_9PROT) HSP 1 Score: 278 bits (710), Expect = 1.740e-89 Identity = 146/206 (70.87%), Postives = 168/206 (81.55%), Query Frame = 1
Query: 1 MSLVILISGRGSNMQAILDAGLPVAAVVSNRRDAAGLAVAAARGVSTAVIEHKEYGTREGFDAALAAEIDRHAPKAVALAGFMRILTPRFVGRFAGRLVNIHPSLLPSFAGLDTHERALAAGVKLHGCTVHFVTAELDHGPIVAQAAVPVLPGDTPDALAARVLRQEHLLYPRALGWLLAGQLVIDNGIVRVKDPDAQQLAYSDRP 618
MS+VILISGRGSN++A+LD+G+PVAAV+SN+ A GLA+AA GV T V+EHK Y +RE FDAALAAEI+R AP+ V LAGFMR+LTP FV FAGRL+NIHPSLLP+F GLDTH RALAAGVKLHGCTVHFVTA+LDHGPI+AQAAVPVL DT + LAARVL QEH + PRA+ W L G+LVI G V VK DAQ L S RP
Sbjct: 1 MSVVILISGRGSNLRALLDSGVPVAAVISNQAGAPGLAIAAQHGVETRVVEHKAYASREAFDAALAAEIERFAPRLVVLAGFMRVLTPGFVAHFAGRLINIHPSLLPAFPGLDTHARALAAGVKLHGCTVHFVTADLDHGPIIAQAAVPVLADDTVERLAARVLAQEHSVLPRAVRWFLDGRLVIAGGRVHVKGDDAQ-LVLSARP 205
BLAST of mRNA_P-wetherbeei_contig19888.1.1 vs. uniprot
Match: A0A521YGX6_9PROT (Phosphoribosylglycinamide formyltransferase n=1 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A521YGX6_9PROT) HSP 1 Score: 277 bits (709), Expect = 2.300e-89 Identity = 142/202 (70.30%), Postives = 164/202 (81.19%), Query Frame = 1
Query: 7 LVILISGRGSNMQAILDAGLPVAAVVSNRRDAAGLAVAAARGVSTAVIEHKEYGTREGFDAALAAEIDRHAPKAVALAGFMRILTPRFVGRFAGRLVNIHPSLLPSFAGLDTHERALAAGVKLHGCTVHFVTAELDHGPIVAQAAVPVLPGDTPDALAARVLRQEHLLYPRALGWLLAGQLVIDNGIVRVKDPDAQQLAYSD 612
+V LISGRGSN+QA+L+AGLPV+ V+SNR DA GLA AAARG+ T +IEH + TRE FDAALA +ID P+ V LAGFMR+LT FV R+ GRL+NIHPSLLP+F GLDTH RALA GVKLHGCTVHFVTAELDHGPIV QAAVPV P DT DALAARVLRQEH++YPRA W L G+LVI++G+VRVK DAQ + D
Sbjct: 2 IVALISGRGSNLQALLEAGLPVSGVISNRADAKGLAAAAARGIPTRIIEHARFPTREAFDAALAEQIDAFHPRLVVLAGFMRVLTQSFVTRYEGRLLNIHPSLLPAFPGLDTHARALAEGVKLHGCTVHFVTAELDHGPIVIQAAVPVRPHDTADALAARVLRQEHVIYPRAARWFLDGKLVIESGVVRVKGNDAQLVLAPD 203
BLAST of mRNA_P-wetherbeei_contig19888.1.1 vs. uniprot
Match: A0A1F4FB12_9PROT (Phosphoribosylglycinamide formyltransferase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_68_20 TaxID=1797505 RepID=A0A1F4FB12_9PROT) HSP 1 Score: 277 bits (709), Expect = 2.380e-89 Identity = 141/204 (69.12%), Postives = 168/204 (82.35%), Query Frame = 1
Query: 1 MSLVILISGRGSNMQAILDAGLPVAAVVSNRRDAAGLAVAAARGVSTAVIEHKEYGTREGFDAALAAEIDRHAPKAVALAGFMRILTPRFVGRFAGRLVNIHPSLLPSFAGLDTHERALAAGVKLHGCTVHFVTAELDHGPIVAQAAVPVLPGDTPDALAARVLRQEHLLYPRALGWLLAGQLVIDNGIVRVKDPDAQQLAYSD 612
MS+V+LISGRGSN+QA+L+AG+PV+AV+SNR DA GL +AAARG +T V+EH+ + TRE FD ALAA+ID P+ VALAGFMR+LTP F RFAGR++NIHPSLLP+F GLDTH RALAAGVKLHGCTVHFVT ELD GPIV QAAV V GDT DALA+RVLRQEH++YPRA+ W L G+LVI+ VRVK DAQ + +D
Sbjct: 1 MSVVVLISGRGSNLQALLEAGVPVSAVISNRADAKGLQIAAARGAATQVLEHRGFATREAFDDALAAKIDEFTPRLVALAGFMRLLTPAFTQRFAGRIMNIHPSLLPAFQGLDTHARALAAGVKLHGCTVHFVTPELDSGPIVIQAAVAVRAGDTADALASRVLRQEHVIYPRAVRWFLEGRLVIEGSAVRVKGNDAQLIFAAD 204
BLAST of mRNA_P-wetherbeei_contig19888.1.1 vs. uniprot
Match: A0A1F4FJ70_9PROT (Phosphoribosylglycinamide formyltransferase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_65_14 TaxID=1797501 RepID=A0A1F4FJ70_9PROT) HSP 1 Score: 276 bits (705), Expect = 9.240e-89 Identity = 137/202 (67.82%), Postives = 164/202 (81.19%), Query Frame = 1
Query: 7 LVILISGRGSNMQAILDAGLPVAAVVSNRRDAAGLAVAAARGVSTAVIEHKEYGTREGFDAALAAEIDRHAPKAVALAGFMRILTPRFVGRFAGRLVNIHPSLLPSFAGLDTHERALAAGVKLHGCTVHFVTAELDHGPIVAQAAVPVLPGDTPDALAARVLRQEHLLYPRALGWLLAGQLVIDNGIVRVKDPDAQQLAYSD 612
+V LISGRGSN++A+LDAGLPV+AV+SNR +A GLA AA RG+ T V+EH+ + TR+ FDAALA E+D P+ V LAGFMR+LTP FV R+ GRL+NIHPSLLP+F GLDTH RALA GVKLHGCTVHFVTAELDHGPIV QAA+PV P DT + LAARVLRQEH++YPRA W L G+LVI++G+VRV DAQ + D
Sbjct: 2 IVALISGRGSNLEALLDAGLPVSAVISNRAEAKGLAAAAGRGIPTRVLEHRRFPTRDAFDAALAGEVDAFRPRLVVLAGFMRVLTPAFVARYEGRLLNIHPSLLPAFPGLDTHARALAEGVKLHGCTVHFVTAELDHGPIVIQAAIPVRPDDTAETLAARVLRQEHVIYPRAARWFLDGKLVIESGVVRVTGNDAQLVLAPD 203
BLAST of mRNA_P-wetherbeei_contig19888.1.1 vs. uniprot
Match: A0A2W4JVU8_9PROT (Phosphoribosylglycinamide formyltransferase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A2W4JVU8_9PROT) HSP 1 Score: 275 bits (703), Expect = 2.050e-88 Identity = 137/202 (67.82%), Postives = 168/202 (83.17%), Query Frame = 1
Query: 7 LVILISGRGSNMQAILDAGLPVAAVVSNRRDAAGLAVAAARGVSTAVIEHKEYGTREGFDAALAAEIDRHAPKAVALAGFMRILTPRFVGRFAGRLVNIHPSLLPSFAGLDTHERALAAGVKLHGCTVHFVTAELDHGPIVAQAAVPVLPGDTPDALAARVLRQEHLLYPRALGWLLAGQLVIDNGIVRVKDPDAQQLAYSD 612
+V+LISGRGSNMQA+++AGLPV AV+SNR DAAGLA A +RG+ TAV+ H+ Y RE FDAALA EIDRHAP + LAGFMRILT FV R+AGR++NIHP+LLP+F GL+TH RALAAGVK+HGCTVH+VT LD GPI+ QAAVPV PGDT ++LAARVLRQEH++YPRA+ W L G+L ++NG+VRV+ + Q L YSD
Sbjct: 5 IVVLISGRGSNMQAVVEAGLPVVAVISNRADAAGLAYARSRGIPTAVVAHERYSGREAFDAALAEEIDRHAPDLIVLAGFMRILTDAFVERYAGRMMNIHPALLPAFRGLNTHARALAAGVKIHGCTVHWVTPALDEGPIIIQAAVPVCPGDTEESLAARVLRQEHIIYPRAIRWWLEGRLRLENGVVRVEGGEPQ-LVYSD 205
BLAST of mRNA_P-wetherbeei_contig19888.1.1 vs. uniprot
Match: A0A1F4GS33_9PROT (Phosphoribosylglycinamide formyltransferase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_12_FULL_66_14 TaxID=1797502 RepID=A0A1F4GS33_9PROT) HSP 1 Score: 270 bits (690), Expect = 1.890e-86 Identity = 139/203 (68.47%), Postives = 160/203 (78.82%), Query Frame = 1
Query: 4 SLVILISGRGSNMQAILDAGLPVAAVVSNRRDAAGLAVAAARGVSTAVIEHKEYGTREGFDAALAAEIDRHAPKAVALAGFMRILTPRFVGRFAGRLVNIHPSLLPSFAGLDTHERALAAGVKLHGCTVHFVTAELDHGPIVAQAAVPVLPGDTPDALAARVLRQEHLLYPRALGWLLAGQLVIDNGIVRVKDPDAQQLAYSD 612
S+VILISGRGSNM+AI+++GLPV AV+SN DAAGL A RG++T V+EH+ + +RE FDA LAA IDR AP V LAGFMRILT FV R+ GRL+NIHPSLLP++ GL TH RAL GVK+HGCTVHFVT LDHGPI+ QAAVPVLPGDT DALAARVLRQEH +YP AL W +LVI+NGIVRVK DA Q SD
Sbjct: 3 SIVILISGRGSNMRAIVESGLPVDAVISNVADAAGLGFARDRGIATEVVEHRAFPSREAFDAELAATIDRRAPNIVVLAGFMRILTDGFVRRYEGRLINIHPSLLPAYPGLHTHRRALEEGVKIHGCTVHFVTPRLDHGPIIVQAAVPVLPGDTEDALAARVLRQEHRIYPLALRWFAEERLVIENGIVRVKGQDASQTVLSD 205
BLAST of mRNA_P-wetherbeei_contig19888.1.1 vs. uniprot
Match: A0A1F3YPW1_9PROT (Phosphoribosylglycinamide formyltransferase n=1 Tax=Betaproteobacteria bacterium RBG_16_66_20 TaxID=1797479 RepID=A0A1F3YPW1_9PROT) HSP 1 Score: 268 bits (686), Expect = 7.330e-86 Identity = 138/204 (67.65%), Postives = 169/204 (82.84%), Query Frame = 1
Query: 1 MSLVILISGRGSNMQAILDAGLPVAAVVSNRRDAAGLAVAAARGVSTAVIEHKEYGTREGFDAALAAEIDRHAPKAVALAGFMRILTPRFVGRFAGRLVNIHPSLLPSFAGLDTHERALAAGVKLHGCTVHFVTAELDHGPIVAQAAVPVLPGDTPDALAARVLRQEHLLYPRALGWLLAGQLVIDNGIVRVKDPDAQQLAYSD 612
MS+V+LISGRGSN++A+L AG+PVAAV+SN A GLA+A+ RG+ T +++H ++ +RE F+A LAAEIDR APK V AGFMRI+T FV R+AGR++N+HPSLLP+FAGL THERALAAGVK+HGCTVH VT ELD GPIV QAAVPV GDT D LAARVLRQEHL+YPRA+ W L G+LVI+NG+VRVK DAQ + +SD
Sbjct: 1 MSVVVLISGRGSNLEALLRAGIPVAAVISNVAGAGGLAIASKRGIPTKLVKHGDFPSREAFEAVLAAEIDRLAPKLVVCAGFMRIVTAGFVERYAGRMLNVHPSLLPAFAGLHTHERALAAGVKVHGCTVHLVTPELDAGPIVIQAAVPVRDGDTADTLAARVLRQEHLVYPRAVRWFLEGRLVIENGLVRVKGGDAQCI-FSD 203
BLAST of mRNA_P-wetherbeei_contig19888.1.1 vs. uniprot
Match: A0A1F4BC96_9PROT (Phosphoribosylglycinamide formyltransferase n=1 Tax=Betaproteobacteria bacterium RIFCSPLOWO2_02_FULL_65_24 TaxID=1797489 RepID=A0A1F4BC96_9PROT) HSP 1 Score: 268 bits (686), Expect = 7.590e-86 Identity = 136/203 (67.00%), Postives = 161/203 (79.31%), Query Frame = 1
Query: 4 SLVILISGRGSNMQAILDAGLPVAAVVSNRRDAAGLAVAAARGVSTAVIEHKEYGTREGFDAALAAEIDRHAPKAVALAGFMRILTPRFVGRFAGRLVNIHPSLLPSFAGLDTHERALAAGVKLHGCTVHFVTAELDHGPIVAQAAVPVLPGDTPDALAARVLRQEHLLYPRALGWLLAGQLVIDNGIVRVKDPDAQQLAYSD 612
S+VI+ISGRGSNM+AI+++GLPV AV+SN DAAGL A G++T V+EH+ + +RE FDA LA IDRHAP VALAGFMRILT FV R+ GR++NIHPSLLPS+ GL TH RAL GVK+HGCTVHFVT LDHGPI+AQAAVPVLPGDT DALAARVLRQEH +YP AL W +L+++NGIVRVK DA Q S+
Sbjct: 3 SIVIVISGRGSNMRAIVESGLPVEAVISNVADAAGLGFARDNGIATEVVEHRAFPSREAFDAELAGAIDRHAPGIVALAGFMRILTGGFVHRYEGRMINIHPSLLPSYPGLHTHRRALEEGVKVHGCTVHFVTPRLDHGPIIAQAAVPVLPGDTEDALAARVLRQEHRIYPLALRWFAEDRLIVENGIVRVKGQDASQALLSE 205 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19888.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19888.1.1 >prot_P-wetherbeei_contig19888.1.1 ID=prot_P-wetherbeei_contig19888.1.1|Name=mRNA_P-wetherbeei_contig19888.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=207bp MSLVILISGRGSNMQAILDAGLPVAAVVSNRRDAAGLAVAAARGVSTAVIback to top mRNA from alignment at P-wetherbeei_contig19888:58..1252+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19888.1.1 ID=mRNA_P-wetherbeei_contig19888.1.1|Name=mRNA_P-wetherbeei_contig19888.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1195bp|location=Sequence derived from alignment at P-wetherbeei_contig19888:58..1252+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19888:58..1252+ >mRNA_P-wetherbeei_contig19888.1.1 ID=mRNA_P-wetherbeei_contig19888.1.1|Name=mRNA_P-wetherbeei_contig19888.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=621bp|location=Sequence derived from alignment at P-wetherbeei_contig19888:58..1252+ (Phaeothamnion wetherbeei SAG_119_79)back to top |