mRNA_P-wetherbeei_contig19815.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19815.1.1
Unique NamemRNA_P-wetherbeei_contig19815.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig19815.1.1 vs. uniprot
Match: D7FW59_ECTSI (Anthranilate Phosphoribosyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW59_ECTSI)

HSP 1 Score: 166 bits (420), Expect = 5.120e-48
Identity = 91/114 (79.82%), Postives = 98/114 (85.96%), Query Frame = 1 
Query:    1 LQAGLKPLLERLIEGEELAAADTERAWVDIMEGKAAPEQVAALLCLLRMKGETATEIAGCVRGMKSVCVPVEIDGKLLDIVCLSGDGAHTINVSTASVILAAAAGAKVCKFGNR 342
            L + LKP LE+LI+G EL+AAD+E A V IMEG  A EQVAALLCLLRMKGETATEIAGCVRGMKSV VPV ++G LLDIV   GDGAHTINVSTASVILAAAAGAKVCKFGNR
Sbjct:   38 LGSSLKPYLEKLIDGHELSAADSENALVSIMEGAKA-EQVAALLCLLRMKGETATEIAGCVRGMKSVAVPVHVEGDLLDIVGTGGDGAHTINVSTASVILAAAAGAKVCKFGNR 150
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BLAST of mRNA_P-wetherbeei_contig19815.1.1 vs. uniprot
Match: A0A835ZCJ6_9STRA (Anthranilate phosphoribosyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCJ6_9STRA)

HSP 1 Score: 166 bits (420), Expect = 1.160e-47
Identity = 85/114 (74.56%), Postives = 96/114 (84.21%), Query Frame = 1 
Query:    1 LQAGLKPLLERLIEGEELAAADTERAWVDIMEGKAAPEQVAALLCLLRMKGETATEIAGCVRGMKSVCVPVEIDGKLLDIVCLSGDGAHTINVSTASVILAAAAGAKVCKFGNR 342
            L + LKP LE+LI G++LAAADTE AWV IM+G A  EQVAALLCLLR KGET+TE+AGCVRGMK+ CVPV +DG LLDIV   GDGA TINVSTAS +LAAAAGA+VCKFGNR
Sbjct:   57 LHSSLKPYLEKLIAGQDLAAADTEDAWVQIMQGAAPTEQVAALLCLLRAKGETSTELAGCVRGMKASCVPVHVDGALLDIVGTGGDGADTINVSTASAVLAAAAGARVCKFGNR 170
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BLAST of mRNA_P-wetherbeei_contig19815.1.1 vs. uniprot
Match: A0A7S4ECN4_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ECN4_9STRA)

HSP 1 Score: 123 bits (308), Expect = 2.910e-31
Identity = 67/112 (59.82%), Postives = 79/112 (70.54%), Query Frame = 1 
Query:    7 AGLKPLLERLIEGEELAAADTERAWVDIMEGKAAPEQVAALLCLLRMKGETATEIAGCVRGMKSVCVPVEIDGKLLDIVCLSGDGAHTINVSTASVILAAAAGAKVCKFGNR 342
            A LKP L +LIEGE+LA  D +  +   ++G A+PEQVAA+LC LR KGET  EIAG    M++ CVPV+  G LLDIV   GDGA TIN+ST S ILAAA GAKV K GNR
Sbjct:   42 ASLKPYLSQLIEGEDLAKDDAKGLFGAFLDGSASPEQVAAVLCCLRQKGETPDEIAGAAEAMRAACVPVKTSGTLLDIVGTGGDGACTINLSTCSAILAAACGAKVTKCGNR 153
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BLAST of mRNA_P-wetherbeei_contig19815.1.1 vs. uniprot
Match: A0A7S2RLD9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RLD9_9STRA)

HSP 1 Score: 112 bits (279), Expect = 6.230e-27
Identity = 63/110 (57.27%), Postives = 74/110 (67.27%), Query Frame = 1 
Query:   13 LKPLLERLIEGEELAAADTERAWVDIMEGKAAPEQVAALLCLLRMKGETATEIAGCVRGMKSVCVPVEIDGKLLDIVCLSGDGAHTINVSTASVILAAAAGAKVCKFGNR 342
            LKP LERL+ GE L+  D +     I++G A   QVA+LL L+R  GET  E+AG V  MK  CVPV + GKLLDIV   GDGAHTIN+STA+ ILAAA G K  K GNR
Sbjct:   72 LKPYLERLVAGESLSKEDAKEVCGAILQG-ADQLQVASLLMLMRRNGETPAEVAGFVAAMKDACVPVSVAGKLLDIVGTGGDGAHTINISTAAAILAAACGCKTAKAGNR 180
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BLAST of mRNA_P-wetherbeei_contig19815.1.1 vs. uniprot
Match: A0A7S3K3W9_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3K3W9_9STRA)

HSP 1 Score: 111 bits (278), Expect = 6.720e-27
Identity = 62/112 (55.36%), Postives = 77/112 (68.75%), Query Frame = 1 
Query:   13 LKPLLERLIEGEE--LAAADTERAWVDIMEGKAAPEQVAALLCLLRMKGETATEIAGCVRGMKSVCVPVEIDGKLLDIVCLSGDGAHTINVSTASVILAAAAGAKVCKFGNR 342
            LKP L +LIE  +  L++ +    +   ++G AAPEQVA++LCL+R KGETA EI+G  + M   C PV+  GKLLDIV   GDGA TIN+STAS IL AA GAKV K GNR
Sbjct:   46 LKPYLSKLIENPDTDLSSDECRELFGIFLQGSAAPEQVASILCLMRRKGETAEEISGAAQAMLDACTPVKASGKLLDIVGTGGDGASTINLSTASAILCAALGAKVTKCGNR 157
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BLAST of mRNA_P-wetherbeei_contig19815.1.1 vs. uniprot
Match: K8YW28_NANGC (Anthranilate phosphoribosyltransferase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8YW28_NANGC)

HSP 1 Score: 110 bits (276), Expect = 9.840e-27
Identity = 62/110 (56.36%), Postives = 74/110 (67.27%), Query Frame = 1 
Query:   13 LKPLLERLIEGEELAAADTERAWVDIMEGKAAPEQVAALLCLLRMKGETATEIAGCVRGMKSVCVPVEIDGKLLDIVCLSGDGAHTINVSTASVILAAAAGAKVCKFGNR 342
            LKP LE +I G  L+++D E A+  I+ G   P QV ALL +LR +GET  EIAG VR M     PV + GKLLDIV   GDGAHTIN+STA++ILAAA G K  K GNR
Sbjct:   29 LKPFLEHIIAGASLSSSDVEAAFDRILAGSD-PVQVGALLAMLRQRGETPVEIAGMVRAMLKQRYPVNVTGKLLDIVGTGGDGAHTINISTAAIILAAACGCKAAKLGNR 137
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BLAST of mRNA_P-wetherbeei_contig19815.1.1 vs. uniprot
Match: W7TX86_9STRA (Anthranilate phosphoribosyltransferase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TX86_9STRA)

HSP 1 Score: 110 bits (276), Expect = 2.860e-26
Identity = 62/110 (56.36%), Postives = 74/110 (67.27%), Query Frame = 1 
Query:   13 LKPLLERLIEGEELAAADTERAWVDIMEGKAAPEQVAALLCLLRMKGETATEIAGCVRGMKSVCVPVEIDGKLLDIVCLSGDGAHTINVSTASVILAAAAGAKVCKFGNR 342
            LKP LE +I G  L+++D E A+  I+ G   P QV ALL +LR +GET  EIAG VR M     PV + GKLLDIV   GDGAHTIN+STA++ILAAA G K  K GNR
Sbjct:  133 LKPFLEHIIAGASLSSSDVEAAFDRILAGSD-PVQVGALLAMLRQRGETPVEIAGMVRAMLKQRYPVSVTGKLLDIVGTGGDGAHTINISTAAIILAAACGCKAAKLGNR 241
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BLAST of mRNA_P-wetherbeei_contig19815.1.1 vs. uniprot
Match: A0A7S2HRI9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HRI9_9STRA)

HSP 1 Score: 107 bits (266), Expect = 4.060e-25
Identity = 59/110 (53.64%), Postives = 74/110 (67.27%), Query Frame = 1 
Query:   13 LKPLLERLIEGEELAAADTERAWVDIMEGKAAPEQVAALLCLLRMKGETATEIAGCVRGMKSVCVPVEIDGKLLDIVCLSGDGAHTINVSTASVILAAAAGAKVCKFGNR 342
            LKP LE+L+ GE L+  +   A   I++G A   QV+ALL L+R  GE+  E+AG V  M   CVPV++ GK+LDIV   GDGAHTIN+STA+ ILAAA G K  K GNR
Sbjct:   64 LKPFLEKLVAGESLSFDEARAACSSILQG-ADQLQVSALLMLMRRNGESPAEVAGFVAAMTDACVPVKVSGKMLDIVGTGGDGAHTINISTAAAILAAACGCKTSKAGNR 172
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BLAST of mRNA_P-wetherbeei_contig19815.1.1 vs. uniprot
Match: F0YJ11_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJ11_AURAN)

HSP 1 Score: 105 bits (262), Expect = 1.290e-24
Identity = 59/110 (53.64%), Postives = 72/110 (65.45%), Query Frame = 1 
Query:   13 LKPLLERLIEGEELAAADTERAWVDIMEGKAAPEQVAALLCLLRMKGETATEIAGCVRGMKSVCVPVEIDGKLLDIVCLSGDGAHTINVSTASVILAAAAGAKVCKFGNR 342
            LKP L  LI G+ L+  ++   +    +G AAPE+VAA+LC LR KGE+  E+AG    M+  CV V+  G LLDIV   GDGA TIN+ST S ILAAA GAKV K GNR
Sbjct:   45 LKPYLSTLIGGDGLSFEESRSLFGAFFDGTAAPEEVAAVLCCLRQKGESFEEVAGAATAMRDACVRVDAPGTLLDIVGTGGDGACTINLSTCSAILAAACGAKVTKCGNR 154
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BLAST of mRNA_P-wetherbeei_contig19815.1.1 vs. uniprot
Match: A0A7S4QLN3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4QLN3_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.430e-24
Identity = 65/114 (57.02%), Postives = 76/114 (66.67%), Query Frame = 1 
Query:    7 AGLKPLLERLIEGEE-LAAADTERAWVDIMEGKAAPEQVAALLCLLRMKGETATEIAGCVRGMKSVCVPVEI-DGKLLDIVCLSGDGAHTINVSTASVILAAAAGAKVCKFGNR 342
            A LKP +E LIEGE  L + +   A+ +I+ G  A  QV +LL LLR +GET  EIAG VR M   C  V+I D KLLDIV   GDGA TIN+STASV+LAAAAG  V K GNR
Sbjct:   58 ASLKPYIETLIEGERHLTSDEAHAAFTEILAGADAV-QVGSLLTLLRARGETPEEIAGMVRAMNDACNAVKIPDAKLLDIVGTGGDGADTINISTASVVLAAAAGCTVAKAGNR 170
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19815.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW59_ECTSI5.120e-4879.82Anthranilate Phosphoribosyltransferase n=2 Tax=Ect... [more]
A0A835ZCJ6_9STRA1.160e-4774.56Anthranilate phosphoribosyltransferase n=1 Tax=Tri... [more]
A0A7S4ECN4_9STRA2.910e-3159.82Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A7S2RLD9_9STRA6.230e-2757.27Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S3K3W9_9STRA6.720e-2755.36Hypothetical protein n=1 Tax=Aureoumbra lagunensis... [more]
K8YW28_NANGC9.840e-2756.36Anthranilate phosphoribosyltransferase n=2 Tax=Mon... [more]
W7TX86_9STRA2.860e-2656.36Anthranilate phosphoribosyltransferase n=1 Tax=Nan... [more]
A0A7S2HRI9_9STRA4.060e-2553.64Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
F0YJ11_AURAN1.290e-2453.64Uncharacterized protein n=1 Tax=Aureococcus anopha... [more]
A0A7S4QLN3_9STRA1.430e-2457.02Hypothetical protein (Fragment) n=1 Tax=Ditylum br... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19815contigP-wetherbeei_contig19815:268..1173 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog2880.D7FW59
Preferred nameTRP4
PFAMsGlycos_trans_3N,Glycos_transf_3
Model size342
Max annot lvl2759|Eukaryota
KEGG rclassRC00440
KEGG koko:K00766
KEGG ReactionR01073
KEGG Pathwayko00400,ko01100,ko01110,ko01130,ko01230,map00400,map01100,map01110,map01130,map01230
KEGG ModuleM00023
Hectar predicted targeting categoryother localisation
GOsGO:0000162,GO:0003674,GO:0003824,GO:0004048,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006082,GO:0006520,GO:0006568,GO:0006576,GO:0006586,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0008652,GO:0009058,GO:0009072,GO:0009073,GO:0009308,GO:0009309,GO:0009987,GO:0016053,GO:0016740,GO:0016757,GO:0016763,GO:0018130,GO:0019438,GO:0019752,GO:0034641,GO:0042401,GO:0042430,GO:0042435,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043436,GO:0044106,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044464,GO:0046219,GO:0046394,GO:0046483,GO:0071704,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901605,GO:1901607
Exons4
Evalue8.4e-49
EggNOG OGsCOG0547@1|root,KOG1438@2759|Eukaryota
EC2.4.2.18
Descriptionanthranilate phosphoribosyltransferase activity
Cds size342
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186182.3680913-CDS-P-wetherbeei_contig19815:267..4171683186182.3680913-CDS-P-wetherbeei_contig19815:267..417Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19815 268..417 +
1683186182.3781087-CDS-P-wetherbeei_contig19815:729..8191683186182.3781087-CDS-P-wetherbeei_contig19815:729..819Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19815 730..819 +
1683186182.386337-CDS-P-wetherbeei_contig19815:1010..10201683186182.386337-CDS-P-wetherbeei_contig19815:1010..1020Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19815 1011..1020 +
1683186182.3962884-CDS-P-wetherbeei_contig19815:1081..11731683186182.3962884-CDS-P-wetherbeei_contig19815:1081..1173Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19815 1082..1173 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19815.1.1prot_P-wetherbeei_contig19815.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19815 268..1173 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19815.1.1

>prot_P-wetherbeei_contig19815.1.1 ID=prot_P-wetherbeei_contig19815.1.1|Name=mRNA_P-wetherbeei_contig19815.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=114bp
LQAGLKPLLERLIEGEELAAADTERAWVDIMEGKAAPEQVAALLCLLRMK
GETATEIAGCVRGMKSVCVPVEIDGKLLDIVCLSGDGAHTINVSTASVIL
AAAAGAKVCKFGNR
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mRNA from alignment at P-wetherbeei_contig19815:268..1173+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19815.1.1 ID=mRNA_P-wetherbeei_contig19815.1.1|Name=mRNA_P-wetherbeei_contig19815.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=906bp|location=Sequence derived from alignment at P-wetherbeei_contig19815:268..1173+ (Phaeothamnion wetherbeei SAG_119_79)
CTACAGGCGGGCCTCAAGCCACTCCTGGAGCGGCTGATCGAGGGGGAGGA
GCTGGCGGCGGCGGACACAGAACGTGCGTGGGTGGACATAATGGAGGGCA
AGGCGGCGCCCGAGCAGGTCGCCGCGCTGCTCTGCCTCCTCCGCATGAAG
GTGAGAGAAGAAAAGAAGGAGGCGGATGATATGAATCGGAAGTGAAACGA
CTGGAAGGTGTCACAATCGTTACATTTGGCGGGCTACAACCGTGTTGCGA
TCCTGGGGAGTGAAATCTTATGCCTAGGCCGCTCTTTTGTTTAGAAGCCT
TCTTTCTTGCGCAATGGTACTGCTGTGAGAGAAGGGCGAGGACTTCCTCA
TCTGAATGCGGTTTAGGATCACGCCCTAAGCGAGTGCCCTTCATTCCTCA
GGTACGCTTCTGCCGGCGGTAACTGACTGCGGCGCTCATCCGGTCCTTCC
CTTTTTTTGCAGGGAGAGACGGCGACCGAGATCGCGGGGTGCGTGCGGGG
CATGAAGAGCGTCTGCGTGCCGGTGGAGATCGACGGAAAGCTCCTCGACA
TAGTCGGCACAGGCGAGGCGAAGAACGCGAAAAGAACTGCTTGCTCAGCG
CAGAGCTTTGTGTTCGTTCAGTCGCACTTCCTCCTACCGCATTTCCTCTC
TGTTTTTGTCTTTCTTCTTTGGTTATTGTGCACGGTCTTGTGGATGTTGT
ACTGGCTGGATGTACCCTATGTGAAACTGTGTACCTTAATAAGGTTTGTT
TGAGTCATATGATTGACCAGCTGCCGGCCGCGCCCGCTTTGGCACTTGTC
GGCTGCCTGCACAGGTGGGGATGGTGCGCACACCATCAACGTCTCTACGG
CGTCCGTCATCCTGGCGGCAGCCGCCGGCGCCAAAGTCTGCAAGTTCGGG
AACAGG
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Coding sequence (CDS) from alignment at P-wetherbeei_contig19815:268..1173+

>mRNA_P-wetherbeei_contig19815.1.1 ID=mRNA_P-wetherbeei_contig19815.1.1|Name=mRNA_P-wetherbeei_contig19815.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=342bp|location=Sequence derived from alignment at P-wetherbeei_contig19815:268..1173+ (Phaeothamnion wetherbeei SAG_119_79)
CTACAGGCGGGCCTCAAGCCACTCCTGGAGCGGCTGATCGAGGGGGAGGA
GCTGGCGGCGGCGGACACAGAACGTGCGTGGGTGGACATAATGGAGGGCA
AGGCGGCGCCCGAGCAGGTCGCCGCGCTGCTCTGCCTCCTCCGCATGAAG
GGAGAGACGGCGACCGAGATCGCGGGGTGCGTGCGGGGCATGAAGAGCGT
CTGCGTGCCGGTGGAGATCGACGGAAAGCTCCTCGACATAGTTTGTTTGA
GTGGGGATGGTGCGCACACCATCAACGTCTCTACGGCGTCCGTCATCCTG
GCGGCAGCCGCCGGCGCCAAAGTCTGCAAGTTCGGGAACAGG
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