mRNA_P-wetherbeei_contig1977.4.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig1977.4.1 vs. uniprot
Match: UPI001E1AFE79 (cystatin-B-like n=3 Tax=Jaculus jaculus TaxID=51337 RepID=UPI001E1AFE79) HSP 1 Score: 82.0 bits (201), Expect = 1.080e-15 Identity = 41/94 (43.62%), Postives = 55/94 (58.51%), Query Frame = 2
Query: 122 MIGGYSDAGPADEDVDAVLRSVRHAAEAEAKRDLSPFRAVSSRRQVVAGTNFLINVDVGKGEYAHLTVFRPLPHTNEPPQLKGMELCKAEGDHL 403
M GG+SD PA ++ + V+ E + R S F+AVS R QVVAG+ + I VDVG GE+ H+TV PLPH N+P L + K + D L
Sbjct: 2 MYGGFSDTKPATAEIQEIADKVKSQLEQKENRKFSVFKAVSYRSQVVAGSIYYIKVDVGDGEFIHMTVLEPLPHENKPLSLLSYQTKKTQDDEL 95
BLAST of mRNA_P-wetherbeei_contig1977.4.1 vs. uniprot
Match: A0A8D0C4Z2_9SAUR (Cystatin domain-containing protein n=1 Tax=Salvator merianae TaxID=96440 RepID=A0A8D0C4Z2_9SAUR) HSP 1 Score: 81.3 bits (199), Expect = 2.170e-15 Identity = 43/95 (45.26%), Postives = 52/95 (54.74%), Query Frame = 2
Query: 122 MIGGYSDAGPADEDVDAVLRSVRHAAEAEAKRDLSP-FRAVSSRRQVVAGTNFLINVDVGKGEYAHLTVFRPLPHTNEPPQLKGMELCKAEGDHL 403
M GG SD PA D+ + V + P FRAV + QVVAGTN+ I VD+G+G Y HL +F PLPHTNE P L + K E D L
Sbjct: 2 MTGGLSDVQPATPDIQKLADQVSEDFNENKENQSYPIFRAVDYKTQVVAGTNYFIKVDIGQGNYIHLRIFLPLPHTNEGPSLTSFQTGKVESDPL 96
BLAST of mRNA_P-wetherbeei_contig1977.4.1 vs. uniprot
Match: UPI0014864846 (cystatin-B n=4 Tax=Murinae TaxID=39107 RepID=UPI0014864846) HSP 1 Score: 78.2 bits (191), Expect = 2.670e-14 Identity = 41/94 (43.62%), Postives = 54/94 (57.45%), Query Frame = 2
Query: 122 MIGGYSDAGPADEDVDAVLRSVRHAAEAEAKRDLSPFRAVSSRRQVVAGTNFLINVDVGKGEYAHLTVFRPLPHTNEPPQLKGMELCKAEGDHL 403
M GG S PA + + V+ E + + F+AVS +RQVVAGTNF I VDVG+ +Y HL VF+PLPH N+P L + K + D L
Sbjct: 2 MCGGPSATMPATAETQEIADKVKSQLEEKENQKFGVFKAVSFKRQVVAGTNFFIKVDVGEDKYMHLRVFQPLPHENKPLSLTSYQTNKEKHDEL 95
BLAST of mRNA_P-wetherbeei_contig1977.4.1 vs. uniprot
Match: UPI0020146011 (cystatin 14b, tandem duplicate 1 n=1 Tax=Megalobrama amblycephala TaxID=75352 RepID=UPI0020146011) HSP 1 Score: 75.1 bits (183), Expect = 3.520e-13 Identity = 40/93 (43.01%), Postives = 56/93 (60.22%), Query Frame = 2
Query: 125 IGGYSDAGPADEDVDAVLRSVRHAAEAEAKRDLSPFRAVSSRRQVVAGTNFLINVDVGKGEYAHLTVFRPLPHTNEPPQLKGMELCKAEGDHL 403
+GG S+ A +V + ++H AE +A R F A S QVVAGTN+ I VDVG G++ HL V +PLPHT E QL G+++ K + D +
Sbjct: 5 VGGPSEVKQATAEVQMICDEIKHCAEEKAGRKFVVFTARSYITQVVAGTNYFIKVDVG-GDFVHLRVHKPLPHTGEKLQLHGIQISKCQQDPI 96
BLAST of mRNA_P-wetherbeei_contig1977.4.1 vs. uniprot
Match: CYTB_RAT (Cystatin-B n=2 Tax=Rattus TaxID=10114 RepID=CYTB_RAT) HSP 1 Score: 74.7 bits (182), Expect = 4.710e-13 Identity = 40/94 (42.55%), Postives = 52/94 (55.32%), Query Frame = 2
Query: 122 MIGGYSDAGPADEDVDAVLRSVRHAAEAEAKRDLSPFRAVSSRRQVVAGTNFLINVDVGKGEYAHLTVFRPLPHTNEPPQLKGMELCKAEGDHL 403
M G S PA + + V+ E +A + F+A+S RRQVVAGTNF I VDVG+ + HL VF PLPH N+P L + K + D L
Sbjct: 2 MCGAPSATMPATTETQEIADKVKSQLEEKANQKFDVFKAISFRRQVVAGTNFFIKVDVGEEKCVHLRVFEPLPHENKPLTLSSYQTDKEKHDEL 95
BLAST of mRNA_P-wetherbeei_contig1977.4.1 vs. uniprot
Match: UPI0002C655D2 (stefin-C-like n=1 Tax=Ceratotherium simum simum TaxID=73337 RepID=UPI0002C655D2) HSP 1 Score: 74.3 bits (181), Expect = 6.470e-13 Identity = 37/94 (39.36%), Postives = 53/94 (56.38%), Query Frame = 2
Query: 122 MIGGYSDAGPADEDVDAVLRSVRHAAEAEAKRDLSPFRAVSSRRQVVAGTNFLINVDVGKGEYAHLTVFRPLPHTNEPPQLKGMELCKAEGDHL 403
+ GG+++ PA ++ A+ V+ E + K+ F+AV R QVVAGTN+LI V VG +Y H+ VF+ LPH N P L + K D L
Sbjct: 2 VCGGFTNTQPAMPEIQAIADQVKPQLEEKEKKKFPIFKAVEFRSQVVAGTNYLIKVQVGDDDYVHIQVFKSLPHANRPLDLTRYQTNKTRNDKL 95
BLAST of mRNA_P-wetherbeei_contig1977.4.1 vs. uniprot
Match: A0A6P6N0Q8_CARAU (cystatin-B-like n=1 Tax=Carassius auratus TaxID=7957 RepID=A0A6P6N0Q8_CARAU) HSP 1 Score: 72.8 bits (177), Expect = 2.430e-12 Identity = 38/94 (40.43%), Postives = 56/94 (59.57%), Query Frame = 2
Query: 122 MIGGYSDAGPADEDVDAVLRSVRHAAEAEAKRDLSPFRAVSSRRQVVAGTNFLINVDVGKGEYAHLTVFRPLPHTNEPPQLKGMELCKAEGDHL 403
++GG S A +V + V+H AE +A + + F A S QVVAGTN+ I V+VG+ E+ HL V +PLPH E QL G++ K++ D +
Sbjct: 4 LVGGPSVVKQATAEVQKICDEVKHHAEEKAGKKFAVFIAKSFTVQVVAGTNYFIKVNVGRDEFVHLKVHKPLPHAGEKLQLHGIQTSKSQHDPI 97
BLAST of mRNA_P-wetherbeei_contig1977.4.1 vs. uniprot
Match: UPI000F4E714F (cystatin-B-like n=2 Tax=Tachysurus fulvidraco TaxID=1234273 RepID=UPI000F4E714F) HSP 1 Score: 72.4 bits (176), Expect = 3.340e-12 Identity = 39/94 (41.49%), Postives = 56/94 (59.57%), Query Frame = 2
Query: 122 MIGGYSDAGPADEDVDAVLRSVRHAAEAEAKRDLSPFRAVSSRRQVVAGTNFLINVDVGKGEYAHLTVFRPLPHTNEPPQLKGMELCKAEGDHL 403
+ GG S+A A+E+V + ++ AE +A R F A S + QVVAGTNF I V VG ++AHL V++ LPH E +L G++ KA D +
Sbjct: 4 LCGGTSEAKEANEEVQKICDEMKSHAEEKAGRTFDVFTAKSYKTQVVAGTNFFIKVHVGGEDFAHLRVYKMLPHAGEKLELHGIQTPKAHHDPI 97
BLAST of mRNA_P-wetherbeei_contig1977.4.1 vs. uniprot
Match: G3WKG0_SARHA (Cystatin A n=1 Tax=Sarcophilus harrisii TaxID=9305 RepID=G3WKG0_SARHA) HSP 1 Score: 72.4 bits (176), Expect = 3.520e-12 Identity = 35/97 (36.08%), Postives = 56/97 (57.73%), Query Frame = 2
Query: 113 SVKMIGGYSDAGPADEDVDAVLRSVRHAAEAEAKRDLSPFRAVSSRRQVVAGTNFLINVDVGKGEYAHLTVFRPLPHTNEPPQLKGMELCKAEGDHL 403
S M GG S+A A ++ ++ ++ E + + F+AVS + QVVAG + + V +G EYAHL ++RPLPHT +P +L ++ K E D +
Sbjct: 3 SKMMTGGLSEAKSATPEIQELVDEIKPTFEGKNNKKYEEFKAVSYKSQVVAGVMYYVKVCLGNDEYAHLKIYRPLPHTEKPIELVDFQMGKTEDDEV 99
BLAST of mRNA_P-wetherbeei_contig1977.4.1 vs. uniprot
Match: UPI001CF3C402 (cystatin-B-like n=1 Tax=Bufo gargarizans TaxID=30331 RepID=UPI001CF3C402) HSP 1 Score: 71.6 bits (174), Expect = 8.600e-12 Identity = 35/94 (37.23%), Postives = 55/94 (58.51%), Query Frame = 2
Query: 122 MIGGYSDAGPADEDVDAVLRSVRHAAEAEAKRDLSPFRAVSSRRQVVAGTNFLINVDVGKGEYAHLTVFRPLPHTNEPPQLKGMELCKAEGDHL 403
M GG PA+ +V A+ V+ + ++ + + F+AVS + Q VAG NF + VD+G G++ H+ +F P+PHT E L G +L K + D L
Sbjct: 16 MCGGVGAEEPANPEVQALCDVVKPEFQVKSGVNAAKFKAVSFKSQTVAGRNFFVKVDLGGGQFCHVRIFEPMPHTGEKASLSGFKLGKKKEDAL 109 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1977.4.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig1977.4.1 >prot_P-wetherbeei_contig1977.4.1 ID=prot_P-wetherbeei_contig1977.4.1|Name=mRNA_P-wetherbeei_contig1977.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=95bp MIGGYSDAGPADEDVDAVLRSVRHAAEAEAKRDLSPFRAVSSRRQVVAGTback to top mRNA from alignment at P-wetherbeei_contig1977:4078..5761+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig1977.4.1 ID=mRNA_P-wetherbeei_contig1977.4.1|Name=mRNA_P-wetherbeei_contig1977.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1684bp|location=Sequence derived from alignment at P-wetherbeei_contig1977:4078..5761+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig1977:4078..5761+ >mRNA_P-wetherbeei_contig1977.4.1 ID=mRNA_P-wetherbeei_contig1977.4.1|Name=mRNA_P-wetherbeei_contig1977.4.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=285bp|location=Sequence derived from alignment at P-wetherbeei_contig1977:4078..5761+ (Phaeothamnion wetherbeei SAG_119_79)back to top |