mRNA_P-wetherbeei_contig19751.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19751.1.1
Unique NamemRNA_P-wetherbeei_contig19751.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig19751.1.1 vs. uniprot
Match: A0A835YMP4_9STRA (5'-nucleotidase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMP4_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.200e-34
Identity = 67/116 (57.76%), Postives = 79/116 (68.10%), Query Frame = 1
Query:   76 LTSFHVNGQPGSSCHGVIEYCGLLPGSYHEETQALKAHYYPLEVDHSLSHDDRVRFMVEWVEKAHSLMVDTKALTKEMIRTGVAKANIALRRGHAEVFRLLQEKRIPLLIFSAGIA 423
            L SF VNG+ GSSCHG +EYCGLL   YH   QALK  YYPLE+D SL+ + RV FM EWVE+AH  +     LTK  I   V +ANIALR  HAE+F  L  + IPLL+FSAG+A
Sbjct:   23 LHSFMVNGRRGSSCHGCLEYCGLLTEEYHRTVQALKQKYYPLELDTSLTQEQRVAFMEEWVEQAHDALSQA-GLTKATIEQAVREANIALRGAHAELFTELDARAIPLLVFSAGLA 137          
BLAST of mRNA_P-wetherbeei_contig19751.1.1 vs. uniprot
Match: A0A7S2RNM4_9STRA (5'-nucleotidase n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2RNM4_9STRA)

HSP 1 Score: 125 bits (315), Expect = 4.300e-32
Identity = 61/126 (48.41%), Postives = 88/126 (69.84%), Query Frame = 1
Query:   49 QVIADFDFTLTSF-HVNGQPGSSCHGVIEYCGLLPGSYHEETQALKAHYYPLEVDHSLSHDDRVRFMVEWVEKAHSLMVDTKALTKEMIRTGVAKANIALRRGHAEVFRLLQEKRIPLLIFSAGIA 423
            +V+ DFD+T+T+F   NG  G SCH V+E CGLLP SYH   QAL+  Y+PLE+ + ++H+++ ++MVEWVE+A   ++D+  L KE I   V KAN+ LR G  +  + L++  IP+LIFSAGIA
Sbjct:   88 RVVIDFDYTMTTFWDENGNRGHSCHAVLEDCGLLPDSYHAVAQALQKKYFPLEISNEITHEEKYKYMVEWVEQAEEALIDS-GLRKEHIPIAVKKANLRLRDGVPDFLKRLEKANIPVLIFSAGIA 212          
BLAST of mRNA_P-wetherbeei_contig19751.1.1 vs. uniprot
Match: A0A7S3LZW9_9STRA (5'-nucleotidase n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3LZW9_9STRA)

HSP 1 Score: 123 bits (308), Expect = 3.500e-31
Identity = 57/127 (44.88%), Postives = 84/127 (66.14%), Query Frame = 1
Query:   52 VIADFDFTLTSFHVNGQPGSSCHGVIEYCGLLPGSYHEETQALKAHYYPLEVDHSLSHDDRVRFMVEWVEKAHSLMVD---TKALTKEMIRTGVAKANIALRRGHAEVFRLLQEKRIPLLIFSAGIA 423
            V++DFDFT+T F++NG  G+SCH +IE CGL+   YH+E Q L+A YYPLEVD +L+ +++ +FM+EWVEKAH L+     T+++    + + +A   + LR        L    ++P LIFSAGIA
Sbjct:   76 VVSDFDFTITKFYMNGVRGASCHKIIEDCGLMAAEYHDEAQGLQAKYYPLEVDPTLNMEEKTKFMIEWVEKAHELLELHGLTRSVVTRAVHSALATGKVGLREKADTFLSLASSSKVPSLIFSAGIA 202          
BLAST of mRNA_P-wetherbeei_contig19751.1.1 vs. uniprot
Match: A0A1Y1IB28_KLENI (5'-nucleotidase n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1IB28_KLENI)

HSP 1 Score: 119 bits (297), Expect = 1.080e-29
Identity = 62/136 (45.59%), Postives = 90/136 (66.18%), Query Frame = 1
Query:   19 KALRFAFGSR-QVIADFDFTLTSFHVNGQPGSSCHGVIEYCGLLPGSYHEETQALKAHYYPLEVDHSLSHDDRVRFMVEWVEKAHSLMVDTKALTKEMIRTGVAKANIALRRGHAEVFRLLQEKRIPLLIFSAGIA 423
            +A+R A   R Q+++DFD TLT F+VNG+ G SCH ++         Y++  Q L  HYYPLE+D S+ +D +V+ M EW EK+H+ +++   LT + IR  VA AN+A R   A++F LL  KR+P+LIFSAG+A
Sbjct:   34 RAIRAAGPQRLQIVSDFDMTLTRFNVNGKKGQSCHSLLSQKN---DQYNQMRQDLYKHYYPLEIDQSIPYDKKVKLMEEWYEKSHATLLEG-GLTLDEIRDSVANANVAFREETAQLFELLDSKRVPVLIFSAGLA 165          
BLAST of mRNA_P-wetherbeei_contig19751.1.1 vs. uniprot
Match: A0A2R5G5J1_9STRA (5'-nucleotidase n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G5J1_9STRA)

HSP 1 Score: 119 bits (299), Expect = 1.420e-28
Identity = 57/125 (45.60%), Postives = 80/125 (64.00%), Query Frame = 1
Query:   49 QVIADFDFTLTSFHVNGQPGSSCHGVIEYCGLLPGSYHEETQALKAHYYPLEVDHSLSHDDRVRFMVEWVEKAHSLMVDTKALTKEMIRTGVAKANIALRRGHAEVFRLLQEKRIPLLIFSAGIA 423
            +V+ DFD+T+T+F V  + G SCH  IE CGLLP SYH   + L+  Y+PLE+   +SH+ + ++MVEWVEKAH  + +     KE +   V +A + LR G  E   +L +  IP+LIFSAGIA
Sbjct:  911 RVVIDFDYTMTTFWVGEERGYSCHRTIEECGLLPDSYHRVARGLQEKYFPLEISAEISHEQKYKYMVEWVEKAHEALKEA-GFRKEYVAEAVRRARVELRAGVPEFLSMLSKAGIPVLIFSAGIA 1034          
BLAST of mRNA_P-wetherbeei_contig19751.1.1 vs. uniprot
Match: A0A482URT0_9ARCH (5'-nucleotidase n=1 Tax=archaeon TaxID=1906665 RepID=A0A482URT0_9ARCH)

HSP 1 Score: 115 bits (289), Expect = 2.420e-28
Identity = 58/129 (44.96%), Postives = 89/129 (68.99%), Query Frame = 1
Query:   52 VIADFDFTLTSFH-VNGQPGSSCHGVIEYCGLLPGSYHEETQALKAHYYPLEVDHSLSHDDRVRFMVEWVEKAHSLMVDTKALTKEMIRTGVAKA----NIALRRGHAEVFRLLQEKRIPLLIFSAGIA 423
            VI DFDFTL++FH  +     SCH +IE  GLL   YH + QA++A+YYP+E+D S+ H++RV+ M++W  K+H+L+V    LTK+++++ V KA     I LR+G ++ F   ++  IP+L+FSAGIA
Sbjct:  136 VITDFDFTLSTFHNTHNTRAYSCHKLIEDSGLLSHEYHAQAQAVQAYYYPIEIDPSIPHEERVQHMIDWAHKSHALLVQY-GLTKDVLQSAVVKAVQTQEIRLRQGVSDFFLACKQHTIPILVFSAGIA 263          
BLAST of mRNA_P-wetherbeei_contig19751.1.1 vs. uniprot
Match: A0A7R9A7F8_9CRUS (5'-nucleotidase n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R9A7F8_9CRUS)

HSP 1 Score: 111 bits (277), Expect = 2.530e-27
Identity = 51/124 (41.13%), Postives = 81/124 (65.32%), Query Frame = 1
Query:   49 QVIADFDFTLTSFHVNGQPGSSCHGVIEYCGLLPGSYHEETQALKAHYYPLEVDHSLSHDDRVRFMVEWVEKAHSLMVDTKALTKEMIRTGVAKANIALRRGHAEVFRLLQEKRIPLLIFSAGI 420
            QVIADFD T++ FH+N +   +C+G++     LP SY E  + LK  YYP+E+ H +S + ++ +M+EW  KAH L+  +  +T++ ++  V+ A +ALR G  E+F +L    +PLLIFSAG+
Sbjct:   46 QVIADFDMTISRFHLNNERCLTCYGILSSSKHLPASYREAAEELKNKYYPIEICHEMSAEQKIPYMLEWYHKAHQLLAQS-CITRQKLKEMVSNAKVALRDGATELFLILATHDVPLLIFSAGL 168          
BLAST of mRNA_P-wetherbeei_contig19751.1.1 vs. uniprot
Match: A0A388LLW2_CHABU (5'-nucleotidase n=1 Tax=Chara braunii TaxID=69332 RepID=A0A388LLW2_CHABU)

HSP 1 Score: 113 bits (283), Expect = 2.080e-26
Identity = 63/136 (46.32%), Postives = 83/136 (61.03%), Query Frame = 1
Query:   19 KALRFAFGSR-QVIADFDFTLTSFHVNGQPGSSCHGVIEYCGLLPGSYHEETQALKAHYYPLEVDHSLSHDDRVRFMVEWVEKAHSLMVDTKALTKEMIRTGVAKANIALRRGHAEVFRLLQEKRIPLLIFSAGIA 423
            KA+R    S+ QVIADFD TLT F VNG+ G +CH ++         Y  + Q L  HYYPLE+   LS++D+ R+M EW  K H L+V+   L +  IR  V  ANI  R G  E+F LL++  +PLLIFSAG+A
Sbjct: 1356 KAIRLGGRSKLQVIADFDMTLTKFRVNGRKGQTCHALLSQENP---EYDRKRQQLYEHYYPLEICPDLSYEDKFRYMEEWWTKVHGLLVEG-GLQRSAIRASVGSANIEFREGCTELFALLEQLEVPLLIFSAGLA 1487          
BLAST of mRNA_P-wetherbeei_contig19751.1.1 vs. uniprot
Match: A0A1S2XXK8_CICAR (5'-nucleotidase n=1 Tax=Cicer arietinum TaxID=3827 RepID=A0A1S2XXK8_CICAR)

HSP 1 Score: 107 bits (267), Expect = 3.600e-25
Identity = 63/142 (44.37%), Postives = 87/142 (61.27%), Query Frame = 1
Query:    1 LVFARLKALRFAFGSR-QVIADFDFTLTSFHVNGQPGSSCHGVIEYCGLLPGSYHEETQALKAHYYPLEVDHSLSHDDRVRFMVEWVEKAHSLMVDTKALTKEMIRTGVAKANIALRRGHAEVFRLLQEKRIPLLIFSAGIA 423
            L+  ++ A+R A   + QVIADFD TLT F VNG  G S HG+++        Y  + Q L  HY+PLE   +L  +++ + M EW  K H L+++   LT E IR  VA ANIA R G +E+F  L+E+ IP+LIFSAG+A
Sbjct:   59 LLHNKISAIRLAGPQKLQVIADFDATLTKFWVNGTRGQSSHGLLQQDNP---EYDAKRQQLYEHYHPLEFSPTLGFEEKRKLMEEWWGKTHGLLIEG-GLTYESIRQSVANANIAFREGVSELFEFLEERDIPVLIFSAGLA 196          
BLAST of mRNA_P-wetherbeei_contig19751.1.1 vs. uniprot
Match: H3A0L9_LATCH (5'-nucleotidase n=2 Tax=Latimeria chalumnae TaxID=7897 RepID=H3A0L9_LATCH)

HSP 1 Score: 106 bits (264), Expect = 3.610e-25
Identity = 50/123 (40.65%), Postives = 81/123 (65.85%), Query Frame = 1
Query:   52 VIADFDFTLTSFHVNGQPGSSCHGVIEYCGLLPGSYHEETQALKAHYYPLEVDHSLSHDDRVRFMVEWVEKAHSLMVDTKALTKEMIRTGVAKANIALRRGHAEVFRLLQEKRIPLLIFSAGI 420
            +I DFD TL+ F  NG+   +CH +I+ C L+     ++   LK  YYP+E+DHSL+ +++  FMVEW  K+H+LM++ + L KE ++  V ++++ LR G+   F  L+E+ +P+ IFSAGI
Sbjct:   33 IITDFDMTLSRFSYNGKRCPTCHNIIDNCKLVTEECRKKLLQLKEKYYPIEIDHSLTIEEKYPFMVEWYTKSHNLMIE-QGLQKEKLKEVVKESDVMLREGYEVFFDKLREQDVPVFIFSAGI 154          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19751.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A835YMP4_9STRA1.200e-3457.765'-nucleotidase n=1 Tax=Tribonema minus TaxID=3033... [more]
A0A7S2RNM4_9STRA4.300e-3248.415'-nucleotidase n=1 Tax=labyrinthulid quahog paras... [more]
A0A7S3LZW9_9STRA3.500e-3144.885'-nucleotidase n=2 Tax=Spumella elongata TaxID=89... [more]
A0A1Y1IB28_KLENI1.080e-2945.595'-nucleotidase n=1 Tax=Klebsormidium nitens TaxID... [more]
A0A2R5G5J1_9STRA1.420e-2845.605'-nucleotidase n=1 Tax=Hondaea fermentalgiana Tax... [more]
A0A482URT0_9ARCH2.420e-2844.965'-nucleotidase n=1 Tax=archaeon TaxID=1906665 Rep... [more]
A0A7R9A7F8_9CRUS2.530e-2741.135'-nucleotidase n=1 Tax=Darwinula stevensoni TaxID... [more]
A0A388LLW2_CHABU2.080e-2646.325'-nucleotidase n=1 Tax=Chara braunii TaxID=69332 ... [more]
A0A1S2XXK8_CICAR3.600e-2544.375'-nucleotidase n=1 Tax=Cicer arietinum TaxID=3827... [more]
H3A0L9_LATCH3.610e-2540.655'-nucleotidase n=2 Tax=Latimeria chalumnae TaxID=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19751contigP-wetherbeei_contig19751:167..900 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog2880.D8LDF4
PFAMsUMPH-1
Model size432
Max annot lvl2759|Eukaryota
KEGG rclassRC00017
KEGG koko:K01081
KEGG ReactionR00183,R00511,R00963,R01126,R01227,R01569,R01664,R01968,R02088,R02102,R02323,R02719,R03346
KEGG Pathwayko00230,ko00240,ko00760,ko01100,ko01110,map00230,map00240,map00760,map01100,map01110
Hectar predicted targeting categorymitochondrion
Exons2
Evalue2.73e-34
EggNOG OGsKOG3128@1|root,KOG3128@2759|Eukaryota
Ec32 ortholog descriptionHAD-like domain
Ec32 orthologEc-15_000820.1
EC3.1.3.5
DescriptionBelongs to the pyrimidine 5'-nucleotidase family
Cds size432
COG categoryO
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186180.615254-CDS-P-wetherbeei_contig19751:166..3941683186180.615254-CDS-P-wetherbeei_contig19751:166..394Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19751 167..394 -
1683186180.6244204-CDS-P-wetherbeei_contig19751:696..9001683186180.6244204-CDS-P-wetherbeei_contig19751:696..900Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19751 697..900 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19751.1.1prot_P-wetherbeei_contig19751.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19751 167..900 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19751.1.1

>prot_P-wetherbeei_contig19751.1.1 ID=prot_P-wetherbeei_contig19751.1.1|Name=mRNA_P-wetherbeei_contig19751.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=144bp
LVFARLKALRFAFGSRQVIADFDFTLTSFHVNGQPGSSCHGVIEYCGLLP
GSYHEETQALKAHYYPLEVDHSLSHDDRVRFMVEWVEKAHSLMVDTKALT
KEMIRTGVAKANIALRRGHAEVFRLLQEKRIPLLIFSAGIAGA*
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mRNA from alignment at P-wetherbeei_contig19751:167..900-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19751.1.1 ID=mRNA_P-wetherbeei_contig19751.1.1|Name=mRNA_P-wetherbeei_contig19751.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=734bp|location=Sequence derived from alignment at P-wetherbeei_contig19751:167..900- (Phaeothamnion wetherbeei SAG_119_79)
TTGGTTTTCGCCAGGTTAAAAGCTCTACGTTTTGCATTTGGTTCTCGCCA GGTTATTGCCGACTTTGACTTCACCTTAACGTCGTTTCACGTCAATGGGC AACCTGGGAGCAGCTGCCATGGAGTTATTGAATACTGCGGCCTCCTACCA GGAAGCTATCACGAGGAGACGCAAGCGCTCAAGGCGCACTACTACCCTCT CGAGGTGTGTCCATCCGGTTAATGAAAGATGTCTGTCTGCATGGCATCGA TTGCTCACAAGAAATTTCACTCCGTTAAGAAGTTTTCTCTTCTCTCTAAA TTCGTTTCAAAGGGTTCAAAAGCTGAACTGCTAGCATCCTCAGAGCCACC ATTTCCCCCATTAATTCTTTTCCCCTGTTTGCGGTTTAAAGATGAGAAAG TTCAGCCACCGCATCTTTCTCATGTCAATCTGCCCTGTTCCACAGAACGA TCGCCACTATTCCCCCCTCGCTTCTTGCCCTGTCTGGGGTGTCCCCGATA CTACAGGTGGACCATTCCCTCTCGCACGACGACCGCGTCCGCTTTATGGT GGAGTGGGTCGAAAAGGCCCACAGTTTGATGGTGGACACGAAAGCCCTCA CAAAGGAAATGATCCGGACCGGCGTCGCCAAAGCGAACATTGCGCTGCGC CGCGGCCACGCGGAAGTGTTCCGGCTGCTGCAGGAGAAGCGCATCCCACT GCTCATCTTCAGTGCTGGAATCGCGGGTGCGTGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig19751:167..900-

>mRNA_P-wetherbeei_contig19751.1.1 ID=mRNA_P-wetherbeei_contig19751.1.1|Name=mRNA_P-wetherbeei_contig19751.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=432bp|location=Sequence derived from alignment at P-wetherbeei_contig19751:167..900- (Phaeothamnion wetherbeei SAG_119_79)
TTGGTTTTCGCCAGGTTAAAAGCTCTACGTTTTGCATTTGGTTCTCGCCA
GGTTATTGCCGACTTTGACTTCACCTTAACGTCGTTTCACGTCAATGGGC
AACCTGGGAGCAGCTGCCATGGAGTTATTGAATACTGCGGCCTCCTACCA
GGAAGCTATCACGAGGAGACGCAAGCGCTCAAGGCGCACTACTACCCTCT
CGAGGTGGACCATTCCCTCTCGCACGACGACCGCGTCCGCTTTATGGTGG
AGTGGGTCGAAAAGGCCCACAGTTTGATGGTGGACACGAAAGCCCTCACA
AAGGAAATGATCCGGACCGGCGTCGCCAAAGCGAACATTGCGCTGCGCCG
CGGCCACGCGGAAGTGTTCCGGCTGCTGCAGGAGAAGCGCATCCCACTGC
TCATCTTCAGTGCTGGAATCGCGGGTGCGTGA
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