mRNA_P-wetherbeei_contig19729.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19729.1.1 vs. uniprot
Match: F6DUT7_DESRL (NAD-dependent epimerase/dehydratase n=1 Tax=Desulforamulus ruminis (strain ATCC 23193 / DSM 2154 / NCIMB 8452 / DL) TaxID=696281 RepID=F6DUT7_DESRL) HSP 1 Score: 80.5 bits (197), Expect = 1.990e-15 Identity = 58/143 (40.56%), Postives = 72/143 (50.35%), Query Frame = 1
Query: 19 VTGASGFLGRHLVARLRSCQATVLPLDRS---------HGV-----DLLDPTSLSAALRNSSPTHVFHLAASLHRGGTRQEACQNFSVNVNGTHNLLAMLSELNLHPTCVLAGTADVYGSGPAPFAESQALSPISSYAASKLA 405
VTGA GF+GRHL+ RL + L R+ H V DLLD L ++ SP VFHLA RG TR+ Q + N+ T NLL L E + VL G+ + YG GP PF E Q P+S+Y ASK A
Sbjct: 2 VTGAGGFIGRHLLKRLTGETVEIGALVRNKDPLSFMPTHKVSLLCGDLLDEVRLRKIIKEFSPDQVFHLAGVRPRGKTRKIVQQAYQGNLTATMNLLGCLQESSCR-AIVLLGSTEEYGLGPGPFREDQPPCPVSAYGASKAA 143
BLAST of mRNA_P-wetherbeei_contig19729.1.1 vs. uniprot
Match: A0A355QHL7_9ACTN (GDP-mannose 4,6 dehydratase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A355QHL7_9ACTN) HSP 1 Score: 80.5 bits (197), Expect = 2.010e-15 Identity = 55/132 (41.67%), Postives = 69/132 (52.27%), Query Frame = 1
Query: 19 VTGASGFLGRHLVARLRSCQATVLPLDRSHG-VDLLDPTSLSAALRNSSPTHVFHLAASLHRGGTRQEACQNFSVNVNGTHNLL--AMLSELNLHPTCVLAGTADVYGSGPAPFAESQALSPISSYAASKLA 405
VTGASGF+GRHLVA LR C V+P DRS G DLLD + + P V+HLA G + + NV GT+N+L A L+E+ T A V + P ES + P+S YAASK A
Sbjct: 8 VTGASGFVGRHLVAHLRDCGDEVVPTDRSDGGPDLLDADGFATLVAEVRPDVVYHLAGQADVGRSWTAPVETLRANVEGTYNVLEAARLAEVGRVLTVTSADIYGVVSTDELPLTESAPVRPVSPYAASKAA 139
BLAST of mRNA_P-wetherbeei_contig19729.1.1 vs. uniprot
Match: A0A7V5BDA6_9BACT (NAD-dependent epimerase/dehydratase family protein n=1 Tax=Saprospiraceae bacterium TaxID=2202734 RepID=A0A7V5BDA6_9BACT) HSP 1 Score: 80.1 bits (196), Expect = 2.590e-15 Identity = 54/137 (39.42%), Postives = 76/137 (55.47%), Query Frame = 1
Query: 13 VAVTGASGFLGRHLVARLRSCQATVLPLDR----SHGVDLLDPTSLSA---ALRNSSPTHVFHLAASLHRGGTRQEACQNFSVNVNGTHNLLAMLSELNLHPTCVLAGTADVYGSGPAPFAESQALSPISSYAASKL 402
+ VTG +G+LGRHLV RLR+ QA V +D+ S +LD T L A+ P +FHLAASL+R + ++N+NGT NLL L N + + T++VYGS APF E+Q S Y+ +K+
Sbjct: 11 ILVTGGNGYLGRHLVERLRNAQADVYIMDKFGDASAKAFILDITDLDVVRTAIAKIQPDIIFHLAASLNRERNFDRFEETNNINLNGTKNLLFALQNTN-YQHFIFTSTSEVYGSNMAPFVETQLADAASPYSLTKV 146
BLAST of mRNA_P-wetherbeei_contig19729.1.1 vs. uniprot
Match: A0A6I3CZW1_9ACTN (NAD-dependent epimerase/dehydratase family protein n=6 Tax=root TaxID=1 RepID=A0A6I3CZW1_9ACTN) HSP 1 Score: 79.3 bits (194), Expect = 5.150e-15 Identity = 54/132 (40.91%), Postives = 70/132 (53.03%), Query Frame = 1
Query: 19 VTGASGFLGRHLVARLRSCQATVLPLDRSHGVDLLDPTSLSAALRNSSPTHVFHLAASLHRGGTRQEACQNFSVNVNGTHNLLAMLSELNLHPTCVLAGTADVYG---SGPAPFAESQALSPISSYAASKLA 405
VTGA+GF+GRHL A L TV+ +DR+ G DLLDP ++ A L + P V+HL G + F VN GT NLL N P + +ADVYG P AE+ P++ YAASK+A
Sbjct: 5 VTGAAGFVGRHLCAHLLGEGDTVIGVDRADGPDLLDPKAVHALLADIKPDVVYHLGGWSDVGASWDYPLDAFRVNAEGTLNLLQACVS-NGKPRVLAVSSADVYGRVSQNELPIAETTPFRPVTPYAASKVA 135
BLAST of mRNA_P-wetherbeei_contig19729.1.1 vs. uniprot
Match: A0A6L6ERG7_9ACTN (NAD-dependent epimerase/dehydratase family protein n=2 Tax=root TaxID=1 RepID=A0A6L6ERG7_9ACTN) HSP 1 Score: 79.3 bits (194), Expect = 5.210e-15 Identity = 56/133 (42.11%), Postives = 73/133 (54.89%), Query Frame = 1
Query: 19 VTGASGFLGRHLVARLRSCQATVLPLDRSHGVDLLDPTSLSAALRNSSPTHVFHLAASLHRGGTRQEACQNFSVNVNGTHNLL-AMLSELNLHPTCVLAGTADVYGS-GPA--PFAESQALSPISSYAASKLA 405
+TGA GF+GRHL L +C TV+ +DR G DLLDP +L A L P V+HLA G + + F VN GT NLL A ++ + P + +ADVYG PA P E P++ YAASK+A
Sbjct: 9 ITGADGFVGRHLSRHLTACGDTVIGVDRPAGPDLLDPAALDALLAEVRPDVVYHLAGWSDIGASWNAPRECFEVNATGTLNLLQACIAHGS--PRVLAVSSADVYGRVDPADLPINEETPFRPVTPYAASKIA 139
BLAST of mRNA_P-wetherbeei_contig19729.1.1 vs. uniprot
Match: A0A7V8YMH9_9ACTN (GDP-mannose 4,6-dehydratase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7V8YMH9_9ACTN) HSP 1 Score: 79.3 bits (194), Expect = 5.700e-15 Identity = 54/134 (40.30%), Postives = 74/134 (55.22%), Query Frame = 1
Query: 19 VTGASGFLGRHLVARLRSCQATVLPLDR--SHGVDLLDPTSLSAALRNSSPTHVFHLAASLHRGGTRQEACQNFSVNVNGTHNLLAMLSELNLHPTCVLAGTADVYGS---GPAPFAESQALSPISSYAASKLA 405
VTGA GF+GRHLVA L++C V+ LDR VD+ D ++ A+ +++P V+HLAA H G F VN GT ++L + N+ V+ G+ADVYG+ P E L PI+ Y ASK A
Sbjct: 5 VTGADGFVGRHLVAHLQACDDDVISLDRHDDEPVDVTDAAAVRVAVEDAAPHVVYHLAAISHVGNAWDAPAHVFRVNAEGTLHVLRACAGANVGRVLVV-GSADVYGAVDERDLPLDEHAPLRPITPYGASKAA 137
BLAST of mRNA_P-wetherbeei_contig19729.1.1 vs. uniprot
Match: A0A7K1A3T8_9ACTN (NAD-dependent epimerase/dehydratase family protein n=4 Tax=root TaxID=1 RepID=A0A7K1A3T8_9ACTN) HSP 1 Score: 78.2 bits (191), Expect = 1.390e-14 Identity = 53/132 (40.15%), Postives = 71/132 (53.79%), Query Frame = 1
Query: 19 VTGASGFLGRHLVARLRSCQATVLPLDRSHGVDLLDPTSLSAALRNSSPTHVFHLAASLHRGGTRQEACQNFSVNVNGTHNLLAMLSELNLHPTCVLAGTADVYGSGPA---PFAESQALSPISSYAASKLA 405
VTGA+GF+GRHL L + TV+ +DR+ G DLLDP +++A L + P V+HL G + F VN GT NLL N P + +AD+YG A P ES P++ YAASK+A
Sbjct: 6 VTGAAGFVGRHLCEHLNNEGDTVIGVDRADGPDLLDPVAVNALLADIRPDVVYHLGGWSDVGASWDYPLDAFRVNAEGTLNLL-QACVANGKPRVLAVSSADIYGHVTAEELPIHESTPFRPVTPYAASKVA 136
BLAST of mRNA_P-wetherbeei_contig19729.1.1 vs. uniprot
Match: A0A831TJW8_9BACL (NAD(P)-dependent oxidoreductase n=1 Tax=Paenibacillaceae bacterium TaxID=2003592 RepID=A0A831TJW8_9BACL) HSP 1 Score: 77.4 bits (189), Expect = 2.840e-14 Identity = 51/142 (35.92%), Postives = 72/142 (50.70%), Query Frame = 1
Query: 4 GATVAVTGASGFLGRHLVARLRSCQATVLPLDR---------SHGVDLLDPTSLSAALRNSSPTHVFHLAASLHRGGTRQEACQNFSVNVNGTHNLLAMLSELNLHPTCVLAGTADVYGSGPAPFAESQALSPISSYAASKL 402
G V +TGA+GF+G+HL ++L C ATV L R + DL D T + +R S+P +FHLA +R NV G+ NL S+L+ ++ GTA+ YG PF E SP+S+Y+ SKL
Sbjct: 8 GKNVLITGANGFVGKHLTSKLIDCSATVSTLTRFPSPLQQLEQYIGDLRDNTFVEETVRTSNPNFIFHLAGYKNRTAAIPAFYDAIEHNVIGSLNLFHAASKLDSLEGIIIIGTAEEYGHNQCPFVEDMRESPVSAYSFSKL 149
BLAST of mRNA_P-wetherbeei_contig19729.1.1 vs. uniprot
Match: UPI001AA0AF07 (GDP-mannose 4,6-dehydratase n=1 Tax=Rhabdothermincola sediminis TaxID=2751370 RepID=UPI001AA0AF07) HSP 1 Score: 77.0 bits (188), Expect = 3.610e-14 Identity = 54/133 (40.60%), Postives = 73/133 (54.89%), Query Frame = 1
Query: 19 VTGASGFLGRHLVARLRSCQATVLPLDRSHG-VDLLDPTSLSAALRNSSPTHVFHLAASLHRGGTRQEACQNFSVNVNGTHNLLAMLSELNLHPTCVLAGTADVYGS---GPAPFAESQALSPISSYAASKLA 405
VTGA+GF+GRHL A L + V+ +DR G DLLD L+A +R+ +P V+HL G + ++ F VN GT NLL L+ L ++ +ADVYG P E L PI+ YAASK+A
Sbjct: 5 VTGAAGFVGRHLTAHLAAMGDEVVGIDRHAGHPDLLDAEGLAALVRDEAPDAVYHLGGWSDVGASWEQPIDTFRVNAEGTLNLL--LACRGLGARVLVVTSADVYGKVSLAELPLTEESPLRPITPYAASKIA 135
BLAST of mRNA_P-wetherbeei_contig19729.1.1 vs. uniprot
Match: A0A2D6PG53_9ACTN (NAD(P)-bd_dom domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6PG53_9ACTN) HSP 1 Score: 77.0 bits (188), Expect = 8.070e-14 Identity = 54/133 (40.60%), Postives = 68/133 (51.13%), Query Frame = 1
Query: 19 VTGASGFLGRHLVARLRSCQATVLPLDRSHG-VDLLDPTSLSAALRNSSPTHVFHLAASLHRGGTRQEACQNFSVNVNGTHNLLAMLSELNLHPTCVLAGTADVYG---SGPAPFAESQALSPISSYAASKLA 405
VTGASGF+GRHLVA L C V+ DRS G DLLD +A + P V+HLA G + + NV GT+N+LA + V +AD+YG P ES + P+S YAASK A
Sbjct: 194 VTGASGFVGRHLVAHLEDCGDEVVQTDRSDGGPDLLDADGFAALVAEVRPDVVYHLAGQADVGRSWSAPVETLRANVEGTYNVLAAARAAEVGRV-VTVTSADIYGLVSPDDLPLTESAPVRPVSPYAASKAA 325 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19729.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19729.1.1 >prot_P-wetherbeei_contig19729.1.1 ID=prot_P-wetherbeei_contig19729.1.1|Name=mRNA_P-wetherbeei_contig19729.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=135bp AGATVAVTGASGFLGRHLVARLRSCQATVLPLDRSHGVDLLDPTSLSAALback to top mRNA from alignment at P-wetherbeei_contig19729:857..1261+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19729.1.1 ID=mRNA_P-wetherbeei_contig19729.1.1|Name=mRNA_P-wetherbeei_contig19729.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=405bp|location=Sequence derived from alignment at P-wetherbeei_contig19729:857..1261+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19729:857..1261+ >mRNA_P-wetherbeei_contig19729.1.1 ID=mRNA_P-wetherbeei_contig19729.1.1|Name=mRNA_P-wetherbeei_contig19729.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=405bp|location=Sequence derived from alignment at P-wetherbeei_contig19729:857..1261+ (Phaeothamnion wetherbeei SAG_119_79)back to top |