mRNA_P-wetherbeei_contig19709.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19709.1.1 vs. uniprot
Match: A0A429WYG2_9BURK (Nuclear transport factor 2 family protein n=2 Tax=Variovorax TaxID=34072 RepID=A0A429WYG2_9BURK) HSP 1 Score: 142 bits (358), Expect = 8.580e-42 Identity = 67/100 (67.00%), Postives = 81/100 (81.00%), Query Frame = 1
Query: 10 LRPTDAAVIARACYVAYAKKDRAAIEALIAPDFHFTSPLDNRLDRKTYFARCWPNSERIAGYDFVHVLSDGERVFVTYETRTEGG-RFRNTEILTVRGGQ 306
+ P+D A +A+ACY AY KKDRAAIEAL+A DFHFTSPLDNRLDR TY RCWPNS+ +++V+++ DG+RVFVTYE R GG RFRNTEILTVR G+
Sbjct: 1 MNPSDKAEVAKACYEAYVKKDRAAIEALLAEDFHFTSPLDNRLDRATYLERCWPNSKAAEAFEYVNLVEDGDRVFVTYEARNTGGHRFRNTEILTVRSGR 100
BLAST of mRNA_P-wetherbeei_contig19709.1.1 vs. uniprot
Match: A0A6P2E6S7_9BURK (Ketosteroid isomerase-related protein n=2 Tax=unclassified Variovorax TaxID=663243 RepID=A0A6P2E6S7_9BURK) HSP 1 Score: 140 bits (352), Expect = 7.470e-41 Identity = 66/97 (68.04%), Postives = 76/97 (78.35%), Query Frame = 1
Query: 19 TDAAVIARACYVAYAKKDRAAIEALIAPDFHFTSPLDNRLDRKTYFARCWPNSERIAGYDFVHVLSDGERVFVTYETRTEGG-RFRNTEILTVRGGQ 306
TD + +ACY AY KDRAAIEAL+A DFHFTSPLDNRLDR YFARCWPNSE G+D+VH++ DG RVFVTYE R +GG RFRNTE+LT G+
Sbjct: 6 TDPIALVKACYAAYVSKDRAAIEALLADDFHFTSPLDNRLDRAAYFARCWPNSENTEGFDYVHLVQDGPRVFVTYEGRVKGGHRFRNTELLTTCDGK 102
BLAST of mRNA_P-wetherbeei_contig19709.1.1 vs. uniprot
Match: A0A1I3ZIE9_9HYPH (Ketosteroid isomerase-related protein n=1 Tax=Mesorhizobium albiziae TaxID=335020 RepID=A0A1I3ZIE9_9HYPH) HSP 1 Score: 139 bits (350), Expect = 1.290e-40 Identity = 67/97 (69.07%), Postives = 80/97 (82.47%), Query Frame = 1
Query: 19 TDAAVIARACYVAYAKKDRAAIEALIAPDFHFTSPLDNRLDRKTYFARCWPNSERIAGYDFVHVLSDGERVFVTYE-TRTEGGRFRNTEILTVRGGQ 306
+D IA+ Y AY KDRAAIEA+IA DFHFTSPLDNR+DRKTYF RCWPNSE I+G+++ H++ +G+RVFVTYE T T G RFRNTEILTVRGG+
Sbjct: 3 SDPIAIAKKSYQAYVDKDRAAIEAVIADDFHFTSPLDNRIDRKTYFERCWPNSETISGFEYKHLVQEGDRVFVTYEGTGTTGKRFRNTEILTVRGGR 99
BLAST of mRNA_P-wetherbeei_contig19709.1.1 vs. uniprot
Match: UPI0019CF433E (Nuclear transport factor 2 family protein n=1 Tax=Hyphomicrobium sp. TaxID=82 RepID=UPI0019CF433E) HSP 1 Score: 137 bits (346), Expect = 5.250e-40 Identity = 67/98 (68.37%), Postives = 73/98 (74.49%), Query Frame = 1
Query: 16 PTDAAVIARACYVAYAKKDRAAIEALIAPDFHFTSPLDNRLDRKTYFARCWPNSERIAGYDFVHVLSDGERVFVTYETRTEGG-RFRNTEILTVRGGQ 306
P D A +ARACY AY DRAA+E LIA DFHFTSPLDNRLDR YFARCWPN IAG+ FV V + G VFVTY T GG RFRNTE+LT+RGGQ
Sbjct: 3 PDDPAAVARACYQAYVDNDRAALEMLIAADFHFTSPLDNRLDRAAYFARCWPNGREIAGFTFVRVAAVGNEVFVTYVGETRGGKRFRNTEVLTIRGGQ 100
BLAST of mRNA_P-wetherbeei_contig19709.1.1 vs. uniprot
Match: A0A2S9QGR0_9HYPH (Ketosteroid isomerase n=2 Tax=Labrys TaxID=204476 RepID=A0A2S9QGR0_9HYPH) HSP 1 Score: 137 bits (346), Expect = 6.700e-40 Identity = 65/95 (68.42%), Postives = 74/95 (77.89%), Query Frame = 1
Query: 22 DAAVIARACYVAYAKKDRAAIEALIAPDFHFTSPLDNRLDRKTYFARCWPNSERIAGYDFVHVLSDGERVFVTYETRTEGGRFRNTEILTVRGGQ 306
D + R Y AY +RAAIE LIAPDFHF+SP DNRLDR TYF RCWPNS+ I G+DFVH+L+DG+RVFVTYE R G FRNTE+LTVRGGQ
Sbjct: 13 DPITVVRKVYKAYVDGNRAAIEPLIAPDFHFSSPRDNRLDRDTYFQRCWPNSQAITGFDFVHLLADGDRVFVTYEGRGNQGGFRNTEVLTVRGGQ 107
BLAST of mRNA_P-wetherbeei_contig19709.1.1 vs. uniprot
Match: UPI001CCD828F (nuclear transport factor 2 family protein n=1 Tax=Phyllobacterium sp. 2063 TaxID=2875708 RepID=UPI001CCD828F) HSP 1 Score: 135 bits (340), Expect = 4.570e-39 Identity = 65/96 (67.71%), Postives = 77/96 (80.21%), Query Frame = 1
Query: 22 DAAVIARACYVAYAKKDRAAIEALIAPDFHFTSPLDNRLDRKTYFARCWPNSERIAGYDFVHVLSDGERVFVTYETR-TEGGRFRNTEILTVRGGQ 306
D A +ARA Y AY KDRAAIE LIA DFHFTSPLDNR+DR YF RCWPNS IAG++F+H++ G++VFVTYE R T+G RFRNTEILT+R G+
Sbjct: 4 DMAEVARATYEAYVAKDRAAIELLIAEDFHFTSPLDNRIDRAAYFERCWPNSRSIAGFEFIHLVPAGDKVFVTYEGRSTDGHRFRNTEILTIRNGK 99
BLAST of mRNA_P-wetherbeei_contig19709.1.1 vs. uniprot
Match: A0A4Q1W137_9HYPH (Ketosteroid isomerase n=2 Tax=unclassified Bosea TaxID=2653178 RepID=A0A4Q1W137_9HYPH) HSP 1 Score: 135 bits (339), Expect = 7.110e-39 Identity = 66/98 (67.35%), Postives = 78/98 (79.59%), Query Frame = 1
Query: 16 PTDAAVIARACYVAYAKKDRAAIEALIAPDFHFTSPLDNRLDRKTYFARCWPNSERIAGYDFVHVLSDGERVFVTYETRTEGGR-FRNTEILTVRGGQ 306
P DA+ +ARACY AY KDRAA++ALIA DFHF+SPLDNRLDR+TYF RCWPNSERI H++ GE VFVTYE + GG+ FRNTEILT+RGG+
Sbjct: 2 PDDASDLARACYQAYVDKDRAALDALIAEDFHFSSPLDNRLDRETYFERCWPNSERIRSCTLKHLIPIGETVFVTYEGESIGGKGFRNTEILTIRGGK 99
BLAST of mRNA_P-wetherbeei_contig19709.1.1 vs. uniprot
Match: B1G9P9_PARG4 (SnoaL-like domain-containing protein n=6 Tax=Burkholderiaceae TaxID=119060 RepID=B1G9P9_PARG4) HSP 1 Score: 132 bits (333), Expect = 5.310e-38 Identity = 68/96 (70.83%), Postives = 74/96 (77.08%), Query Frame = 1
Query: 22 DAAVIARACYVAYAKKDRAAIEALIAPDFHFTSPLDNRLDRKTYFARCWPNSERIAGYDFVHVLSDGERVFVTYETRTEGGR-FRNTEILTVRGGQ 306
D A IARA Y+AY +KDRAAIEALI DFHFTSPLDNRLDR TYF RCWPNSE I + FV V+ GE+VFV YE T G R FRNTE LTVRGG+
Sbjct: 4 DPADIARASYLAYVRKDRAAIEALIGADFHFTSPLDNRLDRSTYFTRCWPNSETITDFQFVDVVVHGEQVFVVYEATTLGSRRFRNTERLTVRGGK 99
BLAST of mRNA_P-wetherbeei_contig19709.1.1 vs. uniprot
Match: A0A839U7N6_9HYPH (Ketosteroid isomerase-like protein n=3 Tax=Phyllobacterium TaxID=28100 RepID=A0A839U7N6_9HYPH) HSP 1 Score: 132 bits (332), Expect = 7.770e-38 Identity = 66/96 (68.75%), Postives = 75/96 (78.12%), Query Frame = 1
Query: 22 DAAVIARACYVAYAKKDRAAIEALIAPDFHFTSPLDNRLDRKTYFARCWPNSERIAGYDFVHVLSDGERVFVTYETR-TEGGRFRNTEILTVRGGQ 306
D IARA Y AY KDRAAIEALIA DF FTSPLDNR+DR TYFARCWPNSE + ++F+H+L ++VFVTYE R T+G RFRNTEIL VR GQ
Sbjct: 4 DITEIARASYEAYVAKDRAAIEALIAEDFRFTSPLDNRIDRATYFARCWPNSETVESFEFIHLLPYADKVFVTYEGRNTDGHRFRNTEILVVRDGQ 99
BLAST of mRNA_P-wetherbeei_contig19709.1.1 vs. uniprot
Match: A0A0Q8T9B8_9BURK (Ketosteroid isomerase n=3 Tax=Acidovorax TaxID=12916 RepID=A0A0Q8T9B8_9BURK) HSP 1 Score: 132 bits (331), Expect = 9.780e-38 Identity = 63/94 (67.02%), Postives = 74/94 (78.72%), Query Frame = 1
Query: 22 DAAVIARACYVAYAKKDRAAIEALIAPDFHFTSPLDNRLDRKTYFARCWPNSERIAGYDFVHVLSDGERVFVTYE-TRTEGGRFRNTEILTVRG 300
DA + RA Y AY +KDR AIEALI DFHF+SPLDNR+DR TYFARCWPNSE I+G+ F+ ++ G VFVTYE TR GGRFRNTE++TVRG
Sbjct: 3 DATALVRASYEAYVRKDREAIEALIDQDFHFSSPLDNRIDRATYFARCWPNSESISGFQFIRLVQQGPAVFVTYEGTRQGGGRFRNTEVVTVRG 96 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19709.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19709.1.1 >prot_P-wetherbeei_contig19709.1.1 ID=prot_P-wetherbeei_contig19709.1.1|Name=mRNA_P-wetherbeei_contig19709.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=102bp MTDLRPTDAAVIARACYVAYAKKDRAAIEALIAPDFHFTSPLDNRLDRKTback to top mRNA from alignment at P-wetherbeei_contig19709:964..1269+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19709.1.1 ID=mRNA_P-wetherbeei_contig19709.1.1|Name=mRNA_P-wetherbeei_contig19709.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=306bp|location=Sequence derived from alignment at P-wetherbeei_contig19709:964..1269+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19709:964..1269+ >mRNA_P-wetherbeei_contig19709.1.1 ID=mRNA_P-wetherbeei_contig19709.1.1|Name=mRNA_P-wetherbeei_contig19709.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=306bp|location=Sequence derived from alignment at P-wetherbeei_contig19709:964..1269+ (Phaeothamnion wetherbeei SAG_119_79)back to top |