mRNA_P-wetherbeei_contig19681.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19681.1.1
Unique NamemRNA_P-wetherbeei_contig19681.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig19681.1.1 vs. uniprot
Match: A0A7G6U217_9BRAD (Alpha/beta hydrolase n=10 Tax=Tardiphaga TaxID=1395974 RepID=A0A7G6U217_9BRAD)

HSP 1 Score: 391 bits (1004), Expect = 1.570e-133
Identity = 190/220 (86.36%), Postives = 199/220 (90.45%), Query Frame = 1
Query:    1 AQHLVNAASSTDAQEIVLVGHSSGSFLGSEILARALKLDPELGRHGPRVVLLTLGGNMPIVGFHKAAQGFRDNLRLLAVEPSIDWIDCQSRKDVMNFFPFDPITGHGIDAGPSRRNPTIVPVRFREIIRPEHYNRFRWKFFRVHFQFVMANERPHPYDFYMIVCGPVPLKERISQPATTLALVNGTSATRENAWKKLGLGTRNPIEAGSSTAAPVVRRIG 660
            AQHLV  A ST AQEIVLVGHSSGSFLGSEILARALKLDPELG HGPRVVLLTLGGNMPIVGFH+ AQGFRDNLRLLAVEPSIDWIDCQSRKDVMNFFPFDPI GHGIDAG +RRNPTIVPVRFREIIRPEHYNRFRWKFFRVHFQFVMANERPH YDF+MIVCGPVPL+ R+SQPATTLALV+GT+ TRENAWKKL LG ++P   GS    PV RRIG
Sbjct:  216 AQHLVQVAKSTKAQEIVLVGHSSGSFLGSEILARALKLDPELGSHGPRVVLLTLGGNMPIVGFHRVAQGFRDNLRLLAVEPSIDWIDCQSRKDVMNFFPFDPIAGHGIDAGAARRNPTIVPVRFREIIRPEHYNRFRWKFFRVHFQFVMANERPHAYDFFMIVCGPVPLRGRVSQPATTLALVDGTATTRENAWKKLDLGAKSPNHTGSHETEPVARRIG 435          
BLAST of mRNA_P-wetherbeei_contig19681.1.1 vs. uniprot
Match: A0A257KQL8_9BRAD (Uncharacterized protein n=2 Tax=Bradyrhizobiaceae TaxID=41294 RepID=A0A257KQL8_9BRAD)

HSP 1 Score: 368 bits (945), Expect = 1.400e-124
Identity = 176/220 (80.00%), Postives = 193/220 (87.73%), Query Frame = 1
Query:    1 AQHLVNAASSTDAQEIVLVGHSSGSFLGSEILARALKLDPELGRHGPRVVLLTLGGNMPIVGFHKAAQGFRDNLRLLAVEPSIDWIDCQSRKDVMNFFPFDPITGHGIDAGPSRRNPTIVPVRFREIIRPEHYNRFRWKFFRVHFQFVMANERPHPYDFYMIVCGPVPLKERISQPATTLALVNGTSATRENAWKKLGLGTRNPIEAGSSTAAPVVRRIG 660
            A+HLV  A ++DAQEIVLVGHSSGSFLGSEILARALKLDP+LGRHG RVVLLTLGGNMPIVGFHK AQ FRDNLR LA+EPSIDWIDCQSRKDVMNF+PFDP+TGHGID GP +RNP IVPVRFREI+R +HYNRFRWKFFRVHFQFVMANERPHPYDFYMIVCGPVPL+ER++ P  TLALV+G   TRENAWKKL LG R+ I   S ++   VRRIG
Sbjct:  216 ARHLVKVAQNSDAQEIVLVGHSSGSFLGSEILARALKLDPDLGRHGSRVVLLTLGGNMPIVGFHKGAQEFRDNLRQLAIEPSIDWIDCQSRKDVMNFYPFDPVTGHGIDVGPEKRNPIIVPVRFREIVRSDHYNRFRWKFFRVHFQFVMANERPHPYDFYMIVCGPVPLRERMAHPVATLALVDGDFTTRENAWKKLDLGQRSAISPPSDSSRAAVRRIG 435          
BLAST of mRNA_P-wetherbeei_contig19681.1.1 vs. uniprot
Match: UPI001BA4FBB1 (hypothetical protein n=1 Tax=Rhodopseudomonas sp. SK50-23 TaxID=340268 RepID=UPI001BA4FBB1)

HSP 1 Score: 364 bits (934), Expect = 6.540e-123
Identity = 177/220 (80.45%), Postives = 193/220 (87.73%), Query Frame = 1
Query:    1 AQHLVNAASSTDAQEIVLVGHSSGSFLGSEILARALKLDPELGRHGPRVVLLTLGGNMPIVGFHKAAQGFRDNLRLLAVEPSIDWIDCQSRKDVMNFFPFDPITGHGIDAGPSRRNPTIVPVRFREIIRPEHYNRFRWKFFRVHFQFVMANERPHPYDFYMIVCGPVPLKERISQPATTLALVNGTSATRENAWKKLGLGTRNPIEAGSSTAAPVVRRIG 660
            A+HLV  A++T AQEIVLVGHSSGSFLGSEILARAL+LDPELGRHGPRVVLLTLGGNMPIVGFHK A  FRDNL LLA EPSIDWIDCQSRKDVMNF+PFDP+ GHGIDAG +RRNPTIVPVRFREIIRPEHY +FRWKFFRVHFQFVMANERPHPYDF+MIV GPVPL+ERI+ PATTLALV+G +ATRENAW KL LG ++ I   S  +    RRIG
Sbjct:  216 ARHLVTVANTTAAQEIVLVGHSSGSFLGSEILARALRLDPELGRHGPRVVLLTLGGNMPIVGFHKRATQFRDNLWLLATEPSIDWIDCQSRKDVMNFYPFDPVAGHGIDAGANRRNPTIVPVRFREIIRPEHYGKFRWKFFRVHFQFVMANERPHPYDFFMIVAGPVPLRERIAHPATTLALVDGDAATRENAWMKLDLGQKSSISGPSDASGTSTRRIG 435          
BLAST of mRNA_P-wetherbeei_contig19681.1.1 vs. uniprot
Match: UPI0019C649E9 (Uncharacterized protein n=1 Tax=Tardiphaga sp. TaxID=1926292 RepID=UPI0019C649E9)

HSP 1 Score: 363 bits (933), Expect = 7.390e-123
Identity = 176/220 (80.00%), Postives = 193/220 (87.73%), Query Frame = 1
Query:    1 AQHLVNAASSTDAQEIVLVGHSSGSFLGSEILARALKLDPELGRHGPRVVLLTLGGNMPIVGFHKAAQGFRDNLRLLAVEPSIDWIDCQSRKDVMNFFPFDPITGHGIDAGPSRRNPTIVPVRFREIIRPEHYNRFRWKFFRVHFQFVMANERPHPYDFYMIVCGPVPLKERISQPATTLALVNGTSATRENAWKKLGLGTRNPIEAGSSTAAPVVRRIG 660
            A+HLV  A ++DAQEIVLVGHSSGSFLGSEILARALKLDPELGRHGPR+VLLTLGGNMPIVGFH+AA GFRDNLR LA+EPSIDWIDCQSRKDVMNFFPFDP+ GHGIDAG ++RNPTIVPVRFREIIRPEHY RFRWKFFRVHFQFVMANERPH YDFYMIVCGPVPLKER++QPA  LA+ +    TRENAW+KL LG   P  A +    PV+RR+G
Sbjct:  212 ARHLVTVAQTSDAQEIVLVGHSSGSFLGSEILARALKLDPELGRHGPRMVLLTLGGNMPIVGFHRAATGFRDNLRRLAIEPSIDWIDCQSRKDVMNFFPFDPVAGHGIDAGKAKRNPTIVPVRFREIIRPEHYERFRWKFFRVHFQFVMANERPHAYDFYMIVCGPVPLKERVNQPAAALAMASTEPQTRENAWQKLDLG---PNSALNDKPEPVIRRLG 428          
BLAST of mRNA_P-wetherbeei_contig19681.1.1 vs. uniprot
Match: A0A515KH21_9BRAD (Uncharacterized protein n=1 Tax=Tardiphaga sp. vice352 TaxID=2592816 RepID=A0A515KH21_9BRAD)

HSP 1 Score: 340 bits (873), Expect = 1.110e-113
Identity = 164/199 (82.41%), Postives = 178/199 (89.45%), Query Frame = 1
Query:    1 AQHLVNAASSTDAQEIVLVGHSSGSFLGSEILARALKLDPELGRHGPRVVLLTLGGNMPIVGFHKAAQGFRDNLRLLAVEPSIDWIDCQSRKDVMNFFPFDPITGHGIDAGPSRRNPTIVPVRFREIIRPEHYNRFRWKFFRVHFQFVMANERPHPYDFYMIVCGPVPLKERISQPATTLALVNGTSATRENAWKKLGL 597
            AQHLV  A S+ AQEIVLVGHSSGSFLGSEILARAL+LDP+LGRHGPR+VLLTLGGNMPIVGFH AA GFRD+LRLLA EPSI+WID QSRKDVMNFFPFDP+TGH IDAGP+RRNPTIVPVRFREI++P+HYNRFRWKFFRVHFQFVMANERPH YDFYMIVCGPV L ER SQP   LALV G  +TR +AW +LGL
Sbjct:  216 AQHLVEVAQSSAAQEIVLVGHSSGSFLGSEILARALELDPDLGRHGPRIVLLTLGGNMPIVGFHAAATGFRDHLRLLATEPSIEWIDVQSRKDVMNFFPFDPVTGHRIDAGPNRRNPTIVPVRFREIVQPDHYNRFRWKFFRVHFQFVMANERPHTYDFYMIVCGPVLLTERFSQPEAALALVTGAPSTRRSAWDQLGL 414          
BLAST of mRNA_P-wetherbeei_contig19681.1.1 vs. uniprot
Match: A0A1M6MW40_9BRAD (Uncharacterized protein n=1 Tax=Bradyrhizobium lablabi TaxID=722472 RepID=A0A1M6MW40_9BRAD)

HSP 1 Score: 332 bits (852), Expect = 1.580e-110
Identity = 161/221 (72.85%), Postives = 182/221 (82.35%), Query Frame = 1
Query:    1 AQHLVNAASSTDAQEIVLVGHSSGSFLGSEILARALKLDPELGRHGPRVVLLTLGGNMPIVGFHKAAQGFRDNLRLLAVEPSIDWIDCQSRKDVMNFFPFDPITGHGIDAGPSRRNPTIVPVRFREIIRPEHYNRFRWKFFRVHFQFVMANERPHPYDFYMIVCGPVPLKERISQPATTLALVNGTSATRENAWKKLGLGTRNPIEAGS-STAAPVVRRIG 660
            AQ+LV+ A S+DA+EIV+VGHSSGSFLG+EILARALK DP LGRHG RVVLLT+GGN PIVGFH A+Q FRD+LRLLAVEPSIDWIDCQSRKDVMNF+PFDP+ GHGID GP RRNPTIVPVRFREII+PEHYN FRWKFFRVHFQFVMANE PH YDF+MIVCGP+PL ER+++P   LA+  G  A RE AWK+L   T N ++A       P  RR G
Sbjct:  212 AQYLVDVAQSSDAEEIVIVGHSSGSFLGAEILARALKFDPNLGRHGRRVVLLTIGGNFPIVGFHAASQDFRDHLRLLAVEPSIDWIDCQSRKDVMNFYPFDPVAGHGIDVGPLRRNPTIVPVRFREIIKPEHYNLFRWKFFRVHFQFVMANELPHAYDFFMIVCGPIPLSERMARPEAALAIATGDDAAREWAWKRLETATVNRVDAPDLGELEPSARRRG 432          
BLAST of mRNA_P-wetherbeei_contig19681.1.1 vs. uniprot
Match: UPI000496947A (hypothetical protein n=1 Tax=Bradyrhizobium sp. URHD0069 TaxID=1380355 RepID=UPI000496947A)

HSP 1 Score: 329 bits (843), Expect = 3.630e-109
Identity = 156/207 (75.36%), Postives = 178/207 (85.99%), Query Frame = 1
Query:    1 AQHLVNAASSTDAQEIVLVGHSSGSFLGSEILARALKLDPELGRHGPRVVLLTLGGNMPIVGFHKAAQGFRDNLRLLAVEPSIDWIDCQSRKDVMNFFPFDPITGHGIDAGPSRRNPTIVPVRFREIIRPEHYNRFRWKFFRVHFQFVMANERPHPYDFYMIVCGPVPLKERISQPATTLALVNGTSATRENAWKKLGLGTRNPIEA 621
            AQ+L   A S+DA+EIV+VGHSSGSFLG+EILARALKLDP LGRHGPR+VLLT+GGN PIVGFH A+Q FRD+LRLLA+EPSIDWIDCQSRKDVMNF+PFDPITG GIDAG SRRNPTIVPVRFREII+ EHYN FRWKFFRVHFQFVMANERPH YDF+MIVCGP+PL ER+++P   LA+  G +A RE AWK L +     ++A
Sbjct:  212 AQYLAKVARSSDAEEIVVVGHSSGSFLGAEILARALKLDPALGRHGPRIVLLTIGGNFPIVGFHAASQDFRDHLRLLAIEPSIDWIDCQSRKDVMNFYPFDPITGQGIDAGSSRRNPTIVPVRFREIIKAEHYNLFRWKFFRVHFQFVMANERPHAYDFFMIVCGPIPLSERMARPEAALAIATGDAAAREWAWKSLEMAVAKRMDA 418          
BLAST of mRNA_P-wetherbeei_contig19681.1.1 vs. uniprot
Match: A0A1H2BC14_9BRAD (Uncharacterized protein n=1 Tax=Bradyrhizobium canariense TaxID=255045 RepID=A0A1H2BC14_9BRAD)

HSP 1 Score: 328 bits (841), Expect = 7.290e-109
Identity = 158/221 (71.49%), Postives = 184/221 (83.26%), Query Frame = 1
Query:    1 AQHLVNAASSTDAQEIVLVGHSSGSFLGSEILARALKLDPELGRHGPRVVLLTLGGNMPIVGFHKAAQGFRDNLRLLAVEPSIDWIDCQSRKDVMNFFPFDPITGHGIDAGPSRRNPTIVPVRFREIIRPEHYNRFRWKFFRVHFQFVMANERPHPYDFYMIVCGPVPLKERISQPATTLALVNGTSATRENAWKKLGLG-TRNPIEAGSSTAAPVVRRIG 660
            A++LV+ A S++A+EIV+VGHSSGSFLG EILARAL+LDP++GRHGPRVVLLT+GGN PIVGFH  ++ FRD+LRLLA+EPSIDWIDCQSRKDVMNFFPFDP+ GHGID G  RRNPTIVPVRFREII+PE+YN FRWKFFRVHFQFVMANERPH YDF+MIVCGPVPL+ER+++P   LA+  G  ATRE AWK+L +  T  P  A      P  RR G
Sbjct:  212 ARYLVDVARSSEAEEIVIVGHSSGSFLGVEILARALQLDPDIGRHGPRVVLLTIGGNFPIVGFHAVSRDFRDHLRLLAIEPSIDWIDCQSRKDVMNFFPFDPVAGHGIDLGADRRNPTIVPVRFREIIKPENYNLFRWKFFRVHFQFVMANERPHAYDFFMIVCGPVPLRERMARPEAALAVATGDDATREWAWKRLKMAATARPDAADLGEMEPSARRRG 432          
BLAST of mRNA_P-wetherbeei_contig19681.1.1 vs. uniprot
Match: A0A537USN3_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A537USN3_9PROT)

HSP 1 Score: 327 bits (839), Expect = 1.460e-108
Identity = 160/221 (72.40%), Postives = 178/221 (80.54%), Query Frame = 1
Query:    1 AQHLVNAASSTDAQEIVLVGHSSGSFLGSEILARALKLDPELGRHGPRVVLLTLGGNMPIVGFHKAAQGFRDNLRLLAVEPSIDWIDCQSRKDVMNFFPFDPITGHGIDAGPSRRNPTIVPVRFREIIRPEHYNRFRWKFFRVHFQFVMANERPHPYDFYMIVCGPVPLKERISQPATTLALVNGTSATRENAWKKLGLGTRNPIEAGS-STAAPVVRRIG 660
            AQ+LVN A   DA+EIV+VGHSSGSFLGSEI+ARALKLDP LGRHGPRVVLLT+GGN PIVGFH A+Q FRD+LRLLAVEPSIDWIDCQSRKDVMNFFPFDPI GHGID G +RRNPTIVPV FREII+PEHY  FRWKFFRVHFQFVMANE PH YDF+MIVCGP+PL ER+++P   LA   G +A RE+AWK L       ++A       P  RR G
Sbjct:  212 AQYLVNVARKGDAEEIVVVGHSSGSFLGSEIVARALKLDPSLGRHGPRVVLLTIGGNFPIVGFHAASQDFRDHLRLLAVEPSIDWIDCQSRKDVMNFFPFDPIAGHGIDVGAARRNPTIVPVPFREIIKPEHYKLFRWKFFRVHFQFVMANELPHAYDFFMIVCGPIPLSERMARPKAALAFATGDAAAREHAWKVLETAVPGRVDAADLGEMEPSARRRG 432          
BLAST of mRNA_P-wetherbeei_contig19681.1.1 vs. uniprot
Match: UPI001C00A76C (hypothetical protein n=3 Tax=unclassified Bradyrhizobium TaxID=2631580 RepID=UPI001C00A76C)

HSP 1 Score: 327 bits (837), Expect = 2.940e-108
Identity = 158/221 (71.49%), Postives = 182/221 (82.35%), Query Frame = 1
Query:    1 AQHLVNAASSTDAQEIVLVGHSSGSFLGSEILARALKLDPELGRHGPRVVLLTLGGNMPIVGFHKAAQGFRDNLRLLAVEPSIDWIDCQSRKDVMNFFPFDPITGHGIDAGPSRRNPTIVPVRFREIIRPEHYNRFRWKFFRVHFQFVMANERPHPYDFYMIVCGPVPLKERISQPATTLALVNGTSATRENAWKKLGLGTRNPIEAGS-STAAPVVRRIG 660
            AQ+LVN A S+DA+EIV+VGHSSGSFLG+EILARAL+LDP LGRHGPR+VL T+GGN PIVGFH A+Q FRD+LR LAVEPSIDWIDCQSRKDVMNFFPFDP+ GHGIDAG +RRNPTIV VRFREII+PEHY  FRWKFFRVHFQFVMANE+PH YDF+MIVCGP+PL+ER++ P   LA+  G +A RE AWK+L        +A + S   P  RR G
Sbjct:  212 AQYLVNIARSSDAEEIVVVGHSSGSFLGTEILARALRLDPGLGRHGPRIVLFTIGGNFPIVGFHAASQDFRDHLRQLAVEPSIDWIDCQSRKDVMNFFPFDPVAGHGIDAGAARRNPTIVAVRFREIIKPEHYKAFRWKFFRVHFQFVMANEQPHAYDFFMIVCGPIPLRERMALPEAALAVATGDAAAREQAWKRLETAVSGGADATNLSGREPSARRRG 432          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19681.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7G6U217_9BRAD1.570e-13386.36Alpha/beta hydrolase n=10 Tax=Tardiphaga TaxID=139... [more]
A0A257KQL8_9BRAD1.400e-12480.00Uncharacterized protein n=2 Tax=Bradyrhizobiaceae ... [more]
UPI001BA4FBB16.540e-12380.45hypothetical protein n=1 Tax=Rhodopseudomonas sp. ... [more]
UPI0019C649E97.390e-12380.00Uncharacterized protein n=1 Tax=Tardiphaga sp. Tax... [more]
A0A515KH21_9BRAD1.110e-11382.41Uncharacterized protein n=1 Tax=Tardiphaga sp. vic... [more]
A0A1M6MW40_9BRAD1.580e-11072.85Uncharacterized protein n=1 Tax=Bradyrhizobium lab... [more]
UPI000496947A3.630e-10975.36hypothetical protein n=1 Tax=Bradyrhizobium sp. UR... [more]
A0A1H2BC14_9BRAD7.290e-10971.49Uncharacterized protein n=1 Tax=Bradyrhizobium can... [more]
A0A537USN3_9PROT1.460e-10872.40Uncharacterized protein n=1 Tax=Alphaproteobacteri... [more]
UPI001C00A76C2.940e-10871.49hypothetical protein n=3 Tax=unclassified Bradyrhi... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19681contigP-wetherbeei_contig19681:1..663 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1380355.JNIJ01000034_gene4293
Model size663
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue5.95e-110
EggNOG OGsCOG0596@1|root,COG0596@2|Bacteria,1MXCB@1224|Proteobacteria,2TU0S@28211|Alphaproteobacteria,3JW43@41294|Bradyrhizobiaceae
DescriptionAlpha beta hydrolase
Cds size663
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186178.8473206-CDS-P-wetherbeei_contig19681:0..6631683186178.8473206-CDS-P-wetherbeei_contig19681:0..663Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19681 1..663 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19681.1.1prot_P-wetherbeei_contig19681.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19681 1..663 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19681.1.1

>prot_P-wetherbeei_contig19681.1.1 ID=prot_P-wetherbeei_contig19681.1.1|Name=mRNA_P-wetherbeei_contig19681.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=221bp
AQHLVNAASSTDAQEIVLVGHSSGSFLGSEILARALKLDPELGRHGPRVV
LLTLGGNMPIVGFHKAAQGFRDNLRLLAVEPSIDWIDCQSRKDVMNFFPF
DPITGHGIDAGPSRRNPTIVPVRFREIIRPEHYNRFRWKFFRVHFQFVMA
NERPHPYDFYMIVCGPVPLKERISQPATTLALVNGTSATRENAWKKLGLG
TRNPIEAGSSTAAPVVRRIG*
back to top

mRNA from alignment at P-wetherbeei_contig19681:1..663+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19681.1.1 ID=mRNA_P-wetherbeei_contig19681.1.1|Name=mRNA_P-wetherbeei_contig19681.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=663bp|location=Sequence derived from alignment at P-wetherbeei_contig19681:1..663+ (Phaeothamnion wetherbeei SAG_119_79)
GCGCAGCATCTGGTCAATGCCGCGAGCAGCACCGACGCGCAGGAAATCGT TCTGGTCGGCCACAGCTCCGGCTCGTTCCTTGGCTCGGAAATTCTCGCCC GCGCGCTCAAGCTCGACCCGGAGCTCGGCCGCCACGGCCCGCGCGTGGTC CTGCTGACGCTTGGCGGCAATATGCCGATCGTCGGCTTCCACAAGGCAGC GCAGGGTTTTCGCGACAATCTGCGGCTGCTGGCCGTCGAGCCATCGATCG ACTGGATCGACTGTCAGTCCCGCAAGGACGTGATGAACTTCTTCCCGTTT GATCCCATTACAGGCCACGGGATCGATGCGGGACCAAGCCGCCGCAACCC GACCATCGTACCGGTGCGGTTCCGCGAAATCATCCGACCCGAACATTACA ACCGGTTCCGCTGGAAGTTCTTCCGGGTGCATTTTCAGTTCGTGATGGCC AACGAGCGCCCGCATCCCTACGATTTTTACATGATCGTCTGCGGTCCGGT TCCCCTGAAGGAACGCATCAGCCAACCCGCCACAACCCTTGCGCTGGTGA ATGGCACTTCTGCAACCCGCGAAAATGCATGGAAGAAGCTGGGTTTGGGC ACCCGAAACCCGATCGAGGCAGGTTCCAGTACCGCCGCCCCCGTCGTCCG GCGCATCGGTTAG
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig19681:1..663+

>mRNA_P-wetherbeei_contig19681.1.1 ID=mRNA_P-wetherbeei_contig19681.1.1|Name=mRNA_P-wetherbeei_contig19681.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=663bp|location=Sequence derived from alignment at P-wetherbeei_contig19681:1..663+ (Phaeothamnion wetherbeei SAG_119_79)
GCGCAGCATCTGGTCAATGCCGCGAGCAGCACCGACGCGCAGGAAATCGT
TCTGGTCGGCCACAGCTCCGGCTCGTTCCTTGGCTCGGAAATTCTCGCCC
GCGCGCTCAAGCTCGACCCGGAGCTCGGCCGCCACGGCCCGCGCGTGGTC
CTGCTGACGCTTGGCGGCAATATGCCGATCGTCGGCTTCCACAAGGCAGC
GCAGGGTTTTCGCGACAATCTGCGGCTGCTGGCCGTCGAGCCATCGATCG
ACTGGATCGACTGTCAGTCCCGCAAGGACGTGATGAACTTCTTCCCGTTT
GATCCCATTACAGGCCACGGGATCGATGCGGGACCAAGCCGCCGCAACCC
GACCATCGTACCGGTGCGGTTCCGCGAAATCATCCGACCCGAACATTACA
ACCGGTTCCGCTGGAAGTTCTTCCGGGTGCATTTTCAGTTCGTGATGGCC
AACGAGCGCCCGCATCCCTACGATTTTTACATGATCGTCTGCGGTCCGGT
TCCCCTGAAGGAACGCATCAGCCAACCCGCCACAACCCTTGCGCTGGTGA
ATGGCACTTCTGCAACCCGCGAAAATGCATGGAAGAAGCTGGGTTTGGGC
ACCCGAAACCCGATCGAGGCAGGTTCCAGTACCGCCGCCCCCGTCGTCCG
GCGCATCGGTTAG
back to top