mRNA_P-wetherbeei_contig19664.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19664.1.1
Unique NamemRNA_P-wetherbeei_contig19664.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig19664.1.1 vs. uniprot
Match: A0A7Z9PR12_9BACT (HTTM domain-containing protein n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7Z9PR12_9BACT)

HSP 1 Score: 153 bits (387), Expect = 3.280e-40
Identity = 64/162 (39.51%), Postives = 97/162 (59.88%), Query Frame = 1
Query:  136 YLLVCVFFWNVDIVPNSNMRLHPPAPLMCL---LRLDQGWNMFAPKPLNEDGWYVIDAEQVNGKHIDLFQGGAPVNWAPPADIASTYRNARWRKFMMNIWAAKLANWRLYYGRYLTRSWNETHTGGEQIKTFQICFMLTINQADGTKKRPEKNVIWIHQCFD 612
            + LV  F WN+        +L  P  +  +   LRLDQ WNMF+P P  EDGW++I+    +G+ +DLF+ G  ++W  P ++A TY+N RWRK+MMN+W  +   +RL +G+Y+ R WN+      ++ TF + +ML     DG++  PEK VIW H CF+
Sbjct:  356 FFLVYSFVWNLGNEELQPRQLRVPRQMAWIGHSLRLDQRWNMFSPGPFTEDGWFIIEGHFKDGRDLDLFKDGGEISWDKPRNVAGTYKNQRWRKYMMNLWLVENERYRLPFGQYICRLWNKNGRSPRELSTFSLIYMLETTNLDGSETEPEKRVIWQHWCFE 517          
BLAST of mRNA_P-wetherbeei_contig19664.1.1 vs. uniprot
Match: A0A1I6M6W2_9EURY (Vitamin K-dependent gamma-carboxylase n=1 Tax=Halomicrobium zhouii TaxID=767519 RepID=A0A1I6M6W2_9EURY)

HSP 1 Score: 142 bits (359), Expect = 1.490e-36
Identity = 69/164 (42.07%), Postives = 100/164 (60.98%), Query Frame = 1
Query:  142 LVCVFFWNVDIVPN-----SNMRLHPPAPLMC---LLRLDQGWNMFAPKPLNEDGWYVIDAEQVNGKHIDLFQGGAPVNWAPPADIASTYRNARWRKFMMNIWAAKLANWRLYYGRYLTRSWNETHTGGEQIKTFQICFMLTINQADGTKKRPEKNVIWIHQCF 609
            LV V  WNV +V +     +  R   P PL      L+L Q W MFAP PL +DGWYV+     NG  +D+++GGAPV++  PAD+++ Y +AR RK+MMN+W    +++RLYYG+Y  R WN+    G +++TF+I ++L     DG +  PE+  IW H CF
Sbjct:  340 LVFVGLWNVQLVDDRTSYSTEHRDIVPQPLDRWGETLQLPQYWTMFAPDPLRDDGWYVMPGTLTNGTQVDVYRGGAPVSFDKPADVSAQYDDARSRKYMMNLWQRSYSDYRLYYGQYHCREWNDDRDRGARLETFRIVYVLEQTGPDGDEP-PEQRTIWRHDCF 502          
BLAST of mRNA_P-wetherbeei_contig19664.1.1 vs. uniprot
Match: A0A7Y5FB03_9BACT (HTTM domain-containing protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Y5FB03_9BACT)

HSP 1 Score: 140 bits (352), Expect = 1.890e-35
Identity = 70/159 (44.03%), Postives = 96/159 (60.38%), Query Frame = 1
Query:  139 LLVCVFFWNV-DIVPNSNMRL-HPPAPLMCLLRLDQGWNMFAPKPLNEDGWYVIDAEQVNGKHIDLFQGGAPVNWAPPADIASTYRNARWRKFMMNIWAAKLANWRLYYGRYLTRSWNETHTGGEQIKTFQICFMLTINQADGTKKRPEKNVIWIHQCF 609
            LL  VF WNV ++ P   + +     PL  LL+L Q W+MF+P+P   DGW+VI+AE++NG+ IDL  G  PV W  P  ++  + + RWRK+MMN+   K ++  LYYGRYLTR+WN   +G E+I TF I FM        T + P K  +W H CF
Sbjct:  348 LLAYVFCWNVSELTPQFALAMPREYRPLGYLLKLHQDWSMFSPRPTRNDGWFVIEAERINGEKIDLMTGNPPV-WEKPELVSRNFPSQRWRKYMMNLREKKYSDHLLYYGRYLTRAWNAKLSGDERINTFDIYFMRETTDYP-TVEAPTKVHLWRHNCF 504          
BLAST of mRNA_P-wetherbeei_contig19664.1.1 vs. uniprot
Match: A0A2V8R2R7_9BACT (HTTM domain-containing protein n=2 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8R2R7_9BACT)

HSP 1 Score: 137 bits (344), Expect = 1.520e-34
Identity = 70/193 (36.27%), Postives = 96/193 (49.74%), Query Frame = 1
Query:   46 QIAERWPLKGYQPTAVQPPL----LGPVVRGLVVYLLVCVFFWNVDIVPNSNMRLHPPAPLMC-LLRLDQGWNMFAPKPLNEDGWYVIDAEQVNGKHIDLFQGGAPVNWAPPADIASTYRNARWRKFMMNIWAAKLANWRLYYGRYLTRSWNETHTGGEQIKTFQICFMLTINQADG-TKKRPEKNVIWIHQC 606
            +  ER    G   ++++PP            L       V  WN+       + +   A  +  +  L Q WNMFAP P  +DGWY+I A+   G  +DLF+GGAPVNWA PA +++ Y NA W+K++  IW    A  RLYY RYL R WN  H G + +KTF I +M       G  +   E  V+W H C
Sbjct:  285 RAGERLGSPGAWASSLRPPTSARRASTAANVLAALFFAYVLLWNLASATAGRVGVPAQAEWVAHVTGLAQVWNMFAPYPKRDDGWYIIPAKLEGGTEVDLFRGGAPVNWAKPASVSALYPNAYWQKYLEYIWLRDYAGARLYYARYLCREWNAAHGGADAVKTFDIVYMREDTPPPGHPEPLAESVVVWHHDC 477          
BLAST of mRNA_P-wetherbeei_contig19664.1.1 vs. uniprot
Match: UPI0003FFCC46 (HTTM domain-containing protein n=1 Tax=Nevskia ramosa TaxID=64002 RepID=UPI0003FFCC46)

HSP 1 Score: 131 bits (330), Expect = 4.580e-32
Identity = 65/169 (38.46%), Postives = 95/169 (56.21%), Query Frame = 1
Query:  109 GPVVRGLVVYLLVCVFFWNVDIVPNSNMRLHPP-APLMCLLRLDQGWNMFAPKPLNEDGWYVIDAEQVNGKHIDLFQGGAP-VNWAPPADIASTYRNARWRKFMMNIWAAKLANWRLYYGRYLTRSWNETHTGGEQIKTFQICFMLTINQADGTKKRPEKNVIWIHQCF 609
            GP+ + L  + +V +  WN   +     RL+    P +  +RLDQ W+MFAP P  EDGW+VI A   +G  +DL       +++  P  I   ++N RW K+M  +W+A  A+ RLYYGR+L R WN TH G +Q+ TF+I +ML  +   G     E+ V+W H CF
Sbjct:  427 GPIAQALAGFTMVVLLTWNFCTIHWLPERLYAMLTPPLRKVRLDQYWDMFAPFPSREDGWFVIPATLRDGTELDLLHPERKGISYDKPEYITHEWQNIRWHKYMERVWSAAFADNRLYYGRWLCRDWNTTHVGQQQLDTFKIIYMLEKSVPPGETPTVEQIVLWRHGCF 595          
BLAST of mRNA_P-wetherbeei_contig19664.1.1 vs. uniprot
Match: A0A2M6P102_9BACT (HTTM domain-containing protein n=1 Tax=Candidatus Magasanikbacteria bacterium CG10_big_fil_rev_8_21_14_0_10_38_6 TaxID=1974647 RepID=A0A2M6P102_9BACT)

HSP 1 Score: 128 bits (322), Expect = 5.480e-31
Identity = 63/170 (37.06%), Postives = 97/170 (57.06%), Query Frame = 1
Query:  106 LGPVVRGLVVYLLVCVFFWNV-DIVPNSNMRLHPPAPLMCLLRLDQGWNMFAPKPLNEDGWYVIDAEQVNGKHIDLFQGGAPV-NWAPPADIASTYRNARWRKFMMNIWAAKLANWRLYYGRYLTRSWNETHTGGEQIKTFQICFMLTINQADGTKKRPEKNVIWIHQCF 609
            LG    G+V+  L  V +WN+ D+V  ++  L      +  L LDQ WNMFAP P  +DGWYVI+    +G  +D+F G     ++  PA +++ Y+N  WRK++M++ + +    RLYYG+YL R+WN   TG +Q+ TF+I F     + D   + P +  +W H CF
Sbjct:  419 LGIFFSGIVLMCLSLVLWWNIADMVQTTSKILPIVRATVLTLHLDQKWNMFAPYPRTDDGWYVIEGVLKDGTVVDVFHGREEQPSYEKPALVSAEYKNRYWRKYLMSLSSQQYIQRRLYYGQYLCRTWNIQATGDKQLATFRIYFFQETTKDDYRVQEPTQRQLWRHDCF 588          
BLAST of mRNA_P-wetherbeei_contig19664.1.1 vs. uniprot
Match: A0A534V723_9DELT (DUF393 domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534V723_9DELT)

HSP 1 Score: 126 bits (316), Expect = 3.160e-30
Identity = 61/168 (36.31%), Postives = 95/168 (56.55%), Query Frame = 1
Query:  106 LGPVVRGLVVYLLVCVFFWNVDIVPNSNMRLHPPAPLMC-LLRLDQGWNMFAPKPLNEDGWYVIDAEQVNGKHIDLFQGGAPVNWAPPADIASTYRNARWRKFMMNIWAAKLANWRLYYGRYLTRSWNETHTGGEQIKTFQICFMLTINQADGTKKRPEKNVIWIHQC 606
            LG  V  L+++LL  VF WN+  +PN + +L   +  +  LLR+DQ WNMFAP+P   DGWYVI     NG+ +DLF+ GA V+W  P  + + +++ RW K+++ IW     N  L Y  YL R+WN  H   E ++  +I ++L     +      +K +++ H C
Sbjct:  394 LGISVNLLILFLLGYVFMWNLKTLPNFHFKLSERSSALGELLRIDQIWNMFAPRPPMNDGWYVIGGRLKNGEVVDLFRNGASVSWGKPVSVGNLFQSYRWWKYLLTIWNKGDNNSWLNYSSYLCRAWNADHDLNETVEHLRIIYVLETTLPNYDVAPLQKILLFEHHC 561          
BLAST of mRNA_P-wetherbeei_contig19664.1.1 vs. uniprot
Match: A0A085WI90_9DELT (HTTM domain-containing protein n=1 Tax=Hyalangium minutum TaxID=394096 RepID=A0A085WI90_9DELT)

HSP 1 Score: 122 bits (307), Expect = 3.200e-29
Identity = 59/166 (35.54%), Postives = 91/166 (54.82%), Query Frame = 1
Query:  121 RGLVVYLLVCVFFWNVDIVPNSNMRLHPPAPLMCLLRLDQGWNMFAPKPLNEDGWYVIDAEQVNGKHIDLFQGGAPVNWAPPADIASTYRNARWRKFMMNIWAAKLANWRLYYGRYLTRSWNETHTGGEQIKTFQICFMLTINQADGTKKRP-EKNVIWIHQCFDD 615
            + L    L+ V +WN+  V        P   ++  L LD  WN+FAP P  +DGW+VID    NG+HI+L   GAP+  A PA +A TY N++WRK+ M++W      +  Y+G+YL  S+N    G +++ +F + +ML +    G    P EK ++W   C D+
Sbjct:  325 QSLAAVFLLWVLWWNLTTVHALREMPKPLGAILFGLYLDATWNLFAPFPFKDDGWFVIDGLTQNGEHINLMTPGAPLTDAKPALVAKTYPNSQWRKYFMSLWFGDNDAYLPYFGQYLCNSYNRDKQGLDRLVSFNMYYMLEMTPPPGEPAPPVEKKLMWTQFCSDE 490          
BLAST of mRNA_P-wetherbeei_contig19664.1.1 vs. uniprot
Match: UPI0004A7360F (HTTM domain-containing protein n=1 Tax=Nevskia soli TaxID=418856 RepID=UPI0004A7360F)

HSP 1 Score: 123 bits (309), Expect = 3.730e-29
Identity = 62/183 (33.88%), Postives = 102/183 (55.74%), Query Frame = 1
Query:   76 YQPTAVQPPLLGPVVRGLVVYLLVCVFFWNVDIVPNSNMRLHPP-APLMCLLRLDQGWNMFAPKPLNEDGWYVIDAEQVNGKHIDLFQGG-APVNWAPPADIASTYRNARWRKFMMNIWAAKLANWRLYYGRYLTRSWNETHTGGEQIKTFQICFMLTINQADGTKKRP-EKNVIWIHQCFDD 615
            Y+ TA++    G  ++ L  + L  V  WN+  V      LH    P + LLR+DQ WN+FAP P  +DGW+V   E  +G  +D+ + G + +++  PA I+S+Y ++RW ++  N+W  + AN R Y+GRYL R WN  H   + +K F++ +ML ++   G      E+ ++W  +C  D
Sbjct:  419 YRETALEG---GRFMQRLAGFFLFIVLAWNLCTVHWLPQLLHRALTPPLRLLRIDQQWNLFAPAPSKDDGWFVFPGELADGTQLDVLRPGHSGISYDKPATISSSYPDSRWHQYEENLWLPQYANNRPYFGRYLCRQWNSAHPAQQALKGFKMIYMLELSPPPGQAPAAVEQRILWRQECGSD 598          
BLAST of mRNA_P-wetherbeei_contig19664.1.1 vs. uniprot
Match: A0A1E5SI05_9FLAO (HTTM domain-containing protein n=2 Tax=Algibacter aquaticus TaxID=1849968 RepID=A0A1E5SI05_9FLAO)

HSP 1 Score: 121 bits (304), Expect = 8.310e-29
Identity = 58/172 (33.72%), Postives = 96/172 (55.81%), Query Frame = 1
Query:  115 VVRGLVVYLLVCVFFWNVDIVPNSNMRLHPPAP-----LMCLLRLDQGWNMFAPKPLNEDGWYVIDAEQVNGKHIDLFQGGAPVNWAPPADIASTYRNARWRKFMMNIWAAKLANWRLYYGRYLTRSWNETHTGGEQIKTFQICFMLTINQADGTKKRPEKNVIWIHQCFDD 615
            +V+G  + L +    WN+      N+ +    P     L   LR+DQ W+MFAP P+ EDGW+VI A   +G  IDLF+  APVN++ P ++++ Y++ RWRK+MM +W +   ++R Y+  YL   W E     ++IK  ++ FML +  + G +K   + V  +   ++D
Sbjct:  319 IVQGTALLLCIYTLLWNLR---ELNLSIDEYLPYNYNNLARALRIDQRWDMFAPYPMMEDGWFVISATLNDGSQIDLFKNEAPVNYSKPKNVSAQYKDERWRKYMMKLWNSNYRSYRKYFLDYLYADWYENSDSEKEIKDIEMVFMLEVTPSIGEEKAIPERVSLLKISYED 487          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19664.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7Z9PR12_9BACT3.280e-4039.51HTTM domain-containing protein n=1 Tax=Phycisphaer... [more]
A0A1I6M6W2_9EURY1.490e-3642.07Vitamin K-dependent gamma-carboxylase n=1 Tax=Halo... [more]
A0A7Y5FB03_9BACT1.890e-3544.03HTTM domain-containing protein n=1 Tax=Candidatus ... [more]
A0A2V8R2R7_9BACT1.520e-3436.27HTTM domain-containing protein n=2 Tax=Acidobacter... [more]
UPI0003FFCC464.580e-3238.46HTTM domain-containing protein n=1 Tax=Nevskia ram... [more]
A0A2M6P102_9BACT5.480e-3137.06HTTM domain-containing protein n=1 Tax=Candidatus ... [more]
A0A534V723_9DELT3.160e-3036.31DUF393 domain-containing protein n=1 Tax=Deltaprot... [more]
A0A085WI90_9DELT3.200e-2935.54HTTM domain-containing protein n=1 Tax=Hyalangium ... [more]
UPI0004A7360F3.730e-2933.88HTTM domain-containing protein n=1 Tax=Nevskia sol... [more]
A0A1E5SI05_9FLAO8.310e-2933.72HTTM domain-containing protein n=2 Tax=Algibacter ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19664contigP-wetherbeei_contig19664:43..660 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1122603.ATVI01000010_gene1041
PFAMsDUF393,VKG_Carbox
Model size618
Max annot lvl135614|Xanthomonadales
Hectar predicted targeting categorysignal anchor
Exons1
Evalue7.51e-33
EggNOG OGsCOG3011@1|root,COG3011@2|Bacteria,1NP8B@1224|Proteobacteria,1RZ0C@1236|Gammaproteobacteria,1X5DK@135614|Xanthomonadales
DescriptionVitamin K-dependent gamma-carboxylase
Cds size618
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186178.3894641-CDS-P-wetherbeei_contig19664:42..6601683186178.3894641-CDS-P-wetherbeei_contig19664:42..660Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19664 43..660 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19664.1.1prot_P-wetherbeei_contig19664.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19664 43..660 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19664.1.1

>prot_P-wetherbeei_contig19664.1.1 ID=prot_P-wetherbeei_contig19664.1.1|Name=mRNA_P-wetherbeei_contig19664.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=206bp
WEKTRLYRWLNQRFAQIAERWPLKGYQPTAVQPPLLGPVVRGLVVYLLVC
VFFWNVDIVPNSNMRLHPPAPLMCLLRLDQGWNMFAPKPLNEDGWYVIDA
EQVNGKHIDLFQGGAPVNWAPPADIASTYRNARWRKFMMNIWAAKLANWR
LYYGRYLTRSWNETHTGGEQIKTFQICFMLTINQADGTKKRPEKNVIWIH
QCFDDK
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mRNA from alignment at P-wetherbeei_contig19664:43..660+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19664.1.1 ID=mRNA_P-wetherbeei_contig19664.1.1|Name=mRNA_P-wetherbeei_contig19664.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=618bp|location=Sequence derived from alignment at P-wetherbeei_contig19664:43..660+ (Phaeothamnion wetherbeei SAG_119_79)
TGGGAAAAAACGCGGCTCTATCGGTGGCTGAACCAACGATTCGCCCAGAT AGCCGAGCGGTGGCCTCTGAAAGGCTATCAGCCGACTGCGGTTCAACCGC CTCTCCTCGGCCCGGTTGTCCGCGGCCTGGTCGTTTATCTACTGGTCTGC GTCTTCTTCTGGAACGTCGACATCGTTCCCAACAGCAACATGCGATTGCA CCCCCCTGCCCCCCTGATGTGCCTGCTGCGTCTGGATCAGGGGTGGAATA TGTTTGCGCCTAAACCTCTCAACGAAGACGGCTGGTACGTCATCGACGCT GAGCAGGTCAACGGCAAACACATCGATCTCTTTCAGGGCGGGGCCCCAGT CAACTGGGCTCCCCCTGCCGACATCGCGTCAACCTACCGCAACGCGCGCT GGCGCAAGTTCATGATGAACATCTGGGCCGCAAAATTGGCGAACTGGCGT CTCTATTACGGGCGCTACCTTACTCGTTCGTGGAACGAAACGCATACTGG CGGCGAGCAAATCAAGACATTCCAAATTTGCTTCATGCTAACCATCAATC AGGCGGACGGCACCAAGAAAAGACCAGAGAAAAACGTCATCTGGATTCAT CAGTGCTTCGACGACAAA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig19664:43..660+

>mRNA_P-wetherbeei_contig19664.1.1 ID=mRNA_P-wetherbeei_contig19664.1.1|Name=mRNA_P-wetherbeei_contig19664.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=618bp|location=Sequence derived from alignment at P-wetherbeei_contig19664:43..660+ (Phaeothamnion wetherbeei SAG_119_79)
TGGGAAAAAACGCGGCTCTATCGGTGGCTGAACCAACGATTCGCCCAGAT
AGCCGAGCGGTGGCCTCTGAAAGGCTATCAGCCGACTGCGGTTCAACCGC
CTCTCCTCGGCCCGGTTGTCCGCGGCCTGGTCGTTTATCTACTGGTCTGC
GTCTTCTTCTGGAACGTCGACATCGTTCCCAACAGCAACATGCGATTGCA
CCCCCCTGCCCCCCTGATGTGCCTGCTGCGTCTGGATCAGGGGTGGAATA
TGTTTGCGCCTAAACCTCTCAACGAAGACGGCTGGTACGTCATCGACGCT
GAGCAGGTCAACGGCAAACACATCGATCTCTTTCAGGGCGGGGCCCCAGT
CAACTGGGCTCCCCCTGCCGACATCGCGTCAACCTACCGCAACGCGCGCT
GGCGCAAGTTCATGATGAACATCTGGGCCGCAAAATTGGCGAACTGGCGT
CTCTATTACGGGCGCTACCTTACTCGTTCGTGGAACGAAACGCATACTGG
CGGCGAGCAAATCAAGACATTCCAAATTTGCTTCATGCTAACCATCAATC
AGGCGGACGGCACCAAGAAAAGACCAGAGAAAAACGTCATCTGGATTCAT
CAGTGCTTCGACGACAAA
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