mRNA_P-wetherbeei_contig19644.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19644.1.1
Unique NamemRNA_P-wetherbeei_contig19644.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig19644.1.1 vs. uniprot
Match: A0A7X8XQJ4_9BURK (Type II secretion system F family protein n=1 Tax=Burkholderiales bacterium TaxID=1891238 RepID=A0A7X8XQJ4_9BURK)

HSP 1 Score: 379 bits (973), Expect = 4.200e-127
Identity = 195/361 (54.02%), Postives = 271/361 (75.07%), Query Frame = 1
Query:    1 YQKLKSQGMFPTNVTQDVGRRGKAAGADSLAYTVMQLSALLRCGIPVDEALESLLETEENPRLRMALARVRVRLREGSTLAAAMAVEEIFPQMLLRMVEAGEETGKPGEILGRYSEYLKRDLEHRQALVGALSYPAVLTVLSVSLLFGLLYFLTPVLNEMYNSLGVEKPMMTRSVLALGDFATTYGLYLIAGLIVVVWAAWAAIPRATRDSWFLSIPLIGPMLKCGLMERWSRTLGMLHEAGVPLVRSLQLSRESLDNEALGQLLAGAEKGIERGEGLSVTLARVYLIPPLLQQFLRTGEKTGELELMLNSAASFYERELDRRRQIMVRFMEPALIVILGIMVGCLVMSVLLPLADISSKL 1083
            +QKL+ +G+FP ++ +D+    + AG + LA+T +QL+ALL+ GIP DEALESL +T E+ RLR ALARVRV LREG  L+ AMA ++ FP ML+RMV AGEE+G+P  ILGRY+ +L+ ++EHR+AL  AL+YP VL  +SV +L  LL  LTPV+ EMY S+  + P MTR ++ LG    ++GL  + GL VV +  W ++PR   D W L +PL+G +++ GL+ RW+RTLG+L+ AGVPLVR+LQ+SRE +DN+ L + L G EK +ERG+GL+V + RV+L+PPLL QFLRTGE+TG+LE ML SAA FYEREL RRR  MVR++EP LI+ +G++VG LV+S LLPL+ ++++L
Sbjct:   29 HQKLRQRGLFPLHLDEDLAGGTRQAGGEDLAHTSLQLAALLKSGIPTDEALESLTQTAESARLRRALARVRVCLREGQALSEAMAEDDTFPPMLVRMVAAGEESGQPAIILGRYANFLQEEIEHRRALQSALTYPVVLVFMSVIILVALLVLLTPVIQEMYASMDRDLPTMTRVMVDLGAVLRSWGLPALLGLGVVGFLVWRSLPRIALDRWKLDLPLLGSLVRAGLISRWARTLGLLYGAGVPLVRALQMSREVIDNQYLNRELRGVEKAVERGDGLAVAMGRVWLVPPLLTQFLRTGERTGDLEPMLVSAAGFYERELTRRRTAMVRWLEPGLILFMGVVVGLLVVSALLPLSQLAAEL 389          
BLAST of mRNA_P-wetherbeei_contig19644.1.1 vs. uniprot
Match: A0A355TR81_9BACT (Uncharacterized protein n=1 Tax=bacterium UBP9_UBA11836 TaxID=2060920 RepID=A0A355TR81_9BACT)

HSP 1 Score: 379 bits (973), Expect = 4.200e-127
Identity = 195/361 (54.02%), Postives = 274/361 (75.90%), Query Frame = 1
Query:    1 YQKLKSQGMFPTNVTQDVGRRGKAAGADSLAYTVMQLSALLRCGIPVDEALESLLETEENPRLRMALARVRVRLREGSTLAAAMAVEEIFPQMLLRMVEAGEETGKPGEILGRYSEYLKRDLEHRQALVGALSYPAVLTVLSVSLLFGLLYFLTPVLNEMYNSLGVEKPMMTRSVLALGDFATTYGLYLIAGLIVVVWAAWAAIPRATRDSWFLSIPLIGPMLKCGLMERWSRTLGMLHEAGVPLVRSLQLSRESLDNEALGQLLAGAEKGIERGEGLSVTLARVYLIPPLLQQFLRTGEKTGELELMLNSAASFYERELDRRRQIMVRFMEPALIVILGIMVGCLVMSVLLPLADISSKL 1083
            +QKLK + +FPT V +D G +G  AG D LAYTV+QLSALL+ GIP+DEAL SL E+ E+ +LR ALARV+VRLREG +L++++  + IFP ML+RMV AGEE G+PG IL RY+ +L+ ++EHR+AL  AL+YP VL  LS+ LL  L+ FLTPV+ EMY+S G E P +T+ ++ +G F  ++G  ++ G  V+++    ++   T+D   ++ P++G M+K GL+ RW+RTL +L  +GVPLVRSLQ+SRE +DN AL + L G E+ +ERG+GLS +L+R+ LIPPLLQQFLRTGEKTG ++ ML SAASFYEREL RRRQ M+R++EP LI+ +G++VG +V+S LLPL+ +S++L
Sbjct:   29 HQKLKERKIFPTKVEEDGGTKGGQAGDDDLAYTVLQLSALLKSGIPMDEALGSLAESAESAKLRKALARVQVRLREGESLSSSLTEDSIFPPMLVRMVSAGEEAGQPGVILERYANFLQDEIEHRRALQSALAYPVVLVSLSIVLLIALVMFLTPVIQEMYDSTGNELPAITQMMINIGTFLRSWGPAVLGGSAVIIFLISHSLSSLTKDKLKMNFPILGRMIKAGLLARWARTLALLQSSGVPLVRSLQMSREVVDNAALDKELRGVEQAVERGDGLSNSLSRIQLIPPLLQQFLRTGEKTGNMDEMLTSAASFYERELARRRQAMIRWLEPCLILFMGVVVGMVVISALLPLSQLSAQL 389          
BLAST of mRNA_P-wetherbeei_contig19644.1.1 vs. uniprot
Match: A0A7V3KX32_9DELT (General secretion pathway protein F n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7V3KX32_9DELT)

HSP 1 Score: 196 bits (499), Expect = 1.130e-55
Identity = 116/377 (30.77%), Postives = 215/377 (57.03%), Query Frame = 1
Query:    7 KLKSQGMFPTNVTQDVGRRGKA------------AGADSLAYTVMQLSALLRCGIPVDEALESLLETEENPRLRMALARVRVRLREGSTLAAAMAVE-EIFPQMLLRMVEAGEETGKPGEILGRYSEYLKRDLEHRQALVGALSYPAVLTVLSVSLLFGLLYFLTPVLNEMYNSLGVEKPMMTRSVLALGDFATTYGLYLIAGLIVVVWAAWAAIPRAT----RDSWFLSIPLIGPMLKCGLMERWSRTLGMLHEAGVPLVRSLQLSRESLDNEALGQLLAGAEKGIERGEGLSVTLARVYLIPPLLQQFLRTGEKTGELELMLNSAASFYERELDRRRQIMVRFMEPALIVILGIMVGCLVMSVLLPLADISSKLN 1086
            KL+ +G++PT + +++ +   A              A  L +   QL+ L   GIP+  AL +L+E   NP L+    +VR R+REG++LA A+A+  +IFP++ + +V AGE +G     L R++++ ++ ++ ++ +  A++YP  + ++ V +LF LL F+ P + +++  LG   P+ T  ++++ +F + Y   ++ G++++ +     + R      RD W L +PLIG + +  ++ RW+RT+  L + G+PL+ +LQ+S+E + N    + LA  E+ +  GE LS  L    L P L+ + +  GEK+G LE ML   A   ERE +   +  +  +EP +I+I+G+ VG + +SVLLP+ ++S  + 
Sbjct:   31 KLRGRGIYPTQIKEELEKGSSAFRRSPFSLFFRKVKARDLVWAFRQLATLAEAGIPLTSALTALVEQLHNPLLKKIFTQVRERVREGNSLADALALHPQIFPRLFIGLVRAGEASGALPLSLARWADFSEQQVDLQERIRAAMTYPIFMFIIGVGVLFFLLTFVIPTVTKIFADLGQSLPLPTLILISVSNFFSRYWWLVLLGIVLLFFLIKRYMQREVGIWFRDRWKLKLPLIGDLHRQLVISRWARTMSTLLQGGLPLIAALQISQEVVGNILFRKALAQTEERVREGEELSFALQEGGLFPALVLEMVAVGEKSGSLEKMLEKVAVHLERETEIEIRRRMSLLEPLMILIMGVGVGFVALSVLLPIFEMSQVIR 407          
BLAST of mRNA_P-wetherbeei_contig19644.1.1 vs. uniprot
Match: A0A7C4PVJ3_9DELT (Type II secretion system protein GspF n=2 Tax=Deltaproteobacteria TaxID=28221 RepID=A0A7C4PVJ3_9DELT)

HSP 1 Score: 196 bits (497), Expect = 2.230e-55
Identity = 117/373 (31.37%), Postives = 211/373 (56.57%), Query Frame = 1
Query:   10 LKSQGMFPTNVTQDVGR-------------RGKAAGADSLAYTVMQLSALLRCGIPVDEALESLLETEENPRLRMALARVRVRLREGSTLAAAMAVE-EIFPQMLLRMVEAGEETGKPGEILGRYSEYLKRDLEHRQALVGALSYPAVLTVLSVSLLFGLLYFLTPVLNEMYNSLGVEKPMMTRSVLALGDFATTYGLYLIAGLIVVVWAAWA----AIPRATRDSWFLSIPLIGPMLKCGLMERWSRTLGMLHEAGVPLVRSLQLSRESLDNEALGQLLAGAEKGIERGEGLSVTLARVYLIPPLLQQFLRTGEKTGELELMLNSAASFYERELDRRRQIMVRFMEPALIVILGIMVGCLVMSVLLPLADIS 1074
            L+ +G+FPT +    G              RG+ + ++ LA    QL+ LL  G+ + E+L ++++  E+  L++ L +V+ R+ EGS+LA AMA   ++FP++   M+ AGE +G    +L R +++ +     R  ++G L+YPA++ V+ + +L  L   + P + +++  L    P+ TR +LA+ DF   Y   L+  + + VWAA A     I R   D++ L +P++G +++   + R+S+TL  L  +GVPL+ +L + R  ++N  L + + GA + I+ GE ++  L R    PPL+   +  GE++G+LE ML++ A  YE + + R   +   +EP +IV++G  VG +V SVLLP+  ++
Sbjct:   32 LRKEGIFPTEIRDQAGGKSAEERNIDLRRLRGRVSPSE-LAVLTRQLATLLHAGVTLVESLAAMIDQVEDDLLKLTLNQVKQRVNEGSSLADAMAQHPKVFPELYCNMIRAGESSGALDVVLNRLADFTEGQARLRAKVIGTLTYPAIMVVVGIGILAVLFVVVIPKITQIFEDLKATLPLPTRILLAISDFLGNYWWLLLLVIGLGVWAALAYIRTEIGRRRWDNFKLRMPVVGGIVRMLAVARFSKTLSTLLHSGVPLLNALAIVRGIVNNRVLAEAIDGARESIQEGESIAAPLKRSGHFPPLVTHMIAIGERSGQLEAMLDNVAQSYENQAEARINQLTTLLEPLMIVLMGGAVGFMVFSVLLPILQLN 403          
BLAST of mRNA_P-wetherbeei_contig19644.1.1 vs. uniprot
Match: A0A7C1ZEK1_9CHLR (Type II secretion system F family protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C1ZEK1_9CHLR)

HSP 1 Score: 191 bits (486), Expect = 8.300e-54
Identity = 116/332 (34.94%), Postives = 190/332 (57.23%), Query Frame = 1
Query:  106 QLSALLRCGIPVDEALESLLETEENPRLRMALARVRVRLREGSTLAAAMAVE-EIFPQMLLRMVEAGEETGKPGEILGRYSEYLKRDLEHRQALVGALSYPAVLTVLSVSLLFGLLYFLTPVLNEMYNSLGVEKPMMTRSVLALGDFATTYGLYLI-AGLIVVVWAAW---AAIPRATRDSWFLSIPLIGPMLKCGLMERWSRTLGMLHEAGVPLVRSLQLSRESLDNEALGQLLAGAEKGIERGEGLSVTLARVYLIPPLLQQFLRTGEKTGELELMLNSAASFYERELDRRRQIMVRFMEPALIVILGIMVGCLVMSVLLPLADISSKLN 1086
            QL+ LL  GI +  AL+ L E      LR  L  V   L++G + +AA++     FP +  R +  GE TG  G++L + + YL+R+    + L  ALSYP  + +++V ++  +L    P + +++ S G E P  TR ++A+  FAT YG+YL+  GLI+   +AW       R  RD+  L +PL+G ++  G + R++RT  +L   G+PL   ++L  ++  N  +   L  A   +  G+GLS  LA   L+PPLL Q +R GE+TG LE  L + A FYE ++DR  +++  F+EPAL + +G++VG + +SV++P+  I S++ 
Sbjct:   71 QLATLLSSGIAIMPALQLLAEQSARRALREVLQEVITSLQQGCSFSAALSAHPRAFPDLYARTITIGERTGNLGDMLRQLAAYLEREQTLARKLRDALSYPLFVLMVAVGVVVLMLTVALPPMVQLFESFGAELPWPTRVLIAISRFATAYGVYLLFGGLILAALSAWWGSQPTGRRLRDAAVLRLPLVGQVILQGHLSRFARTASVLIRGGLPLSEVMELVVQTTGNVVVAAALERARVALLTGQGLSTPLAAERLLPPLLAQMVRVGEETGTLERNLETVADFYEEQVDRNVRLLASFVEPALTIFVGLIVGFIAVSVVMPMYSILSEIK 402          
BLAST of mRNA_P-wetherbeei_contig19644.1.1 vs. uniprot
Match: UPI0020117E28 (type II secretion system inner membrane protein GspF n=1 Tax=Emcibacteraceae bacterium Y4 TaxID=2857064 RepID=UPI0020117E28)

HSP 1 Score: 191 bits (486), Expect = 9.370e-54
Identity = 117/374 (31.28%), Postives = 211/374 (56.42%), Query Frame = 1
Query:    4 QKLKSQGMFPTNVTQDVGRRGKAAGA-----------DSLAYTVMQLSALLRCGIPVDEALESLLETEENPRLRMALARVRVRLREGSTLAAAMAVEE-IFPQMLLRMVEAGEETGKPGEILGRYSEYLKRDLEHRQALVGALSYPAVLTVLSVSLLFGLLYFLTPVLNEMYNSLGVEKPMMTRSVLALGDFATTYGLYLIAGLIVVVWAAWAAIP----RATRDSWFLSIPLIGPMLKCGLMERWSRTLGMLHEAGVPLVRSLQLSRESLDNEALGQLLAGAEKGIERGEGLSVTLARVYLIPPLLQQFLRTGEKTGELELMLNSAASFYERELDRRRQIMVRFMEPALIVILGIMVGCLVMSVLLPLADISS 1077
            +KL+S+ ++P NV     + G + G              L     QL+ +L  G PV+EAL +L    ++  ++  + R+RV++ EG  L+ AMA E+  FP +   MV AGE +G  G I+ R ++Y ++  E +  +  A+ YPAVL+V+++S+L  L+ F+ P +   + ++G E P +T+ V+A  DF   YG +LI  ++  +++ + A+     + +     L  P++G ++      R++RT+G L + G P+  S++ ++E + NE +   +     G+  G+ LSV+L RV + PPLL      GE++G+L  +L   A + ERE D   Q  +  +EPA++VI+G+MVG +V+S++LP+  +++
Sbjct:   30 EKLRSKSLYPVNVILGKDKVGFSIGGFNLKPSKSIKPKDLTMVTRQLATMLSAGTPVEEALVALSAQSDSAVVKETMTRLRVQVSEGKKLSEAMASEKNSFPALYRAMVRAGEASGDLGNIMERIADYNEKSEEMKNKVSTAMVYPAVLSVVALSVLVILMTFVVPKVVSQFENIGAELPALTKGVIAFSDFLLNYGGFLIILVVGGIFSYFYAMKNPALKLSVHGALLKTPVLGKLILSVSSARFARTMGTLIDGGSPVPDSIKAAKEIVRNEVIRNAIDKVYTGVMEGQALSVSLKRVSIFPPLLVYMCSMGERSGKLPFLLLKIADYLEREFDSFTQKAMSLLEPAIVVIMGLMVGLIVLSIMLPIMRLNN 403          
BLAST of mRNA_P-wetherbeei_contig19644.1.1 vs. uniprot
Match: A0A7C1UX48_9DELT (Type II secretion system protein GspF n=3 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C1UX48_9DELT)

HSP 1 Score: 189 bits (480), Expect = 7.350e-53
Identity = 121/378 (32.01%), Postives = 214/378 (56.61%), Query Frame = 1
Query:    4 QKLKSQGMFPTNV-----------TQDVGRRGKAAGADSLAYTVM--QLSALLRCGIPVDEALESLLETEENPRLRMALARVRVRLREGSTLAAAMAVE-EIFPQMLLRMVEAGEETGKPGEILGRYSEYLKRDLEHRQALVGALSYPAVLTVLSVSLLFGLLYFLTPVLNEMYNSLGVEKPMMTRSVLALGDFATTYG--LYLIAGLIVVVWAAWAAIPRATRDSWF----LSIPLIGPMLKCGLMERWSRTLGMLHEAGVPLVRSLQLSRESLDNEALGQLLAGAEKGIERGEGLSVTLARVYLIPPLLQQFLRTGEKTGELELMLNSAASFYERELDRRRQIMVRFMEPALIVILGIMVGCLVMSVLLPLADISS 1077
            QKL++ G+FP ++           T+D+  R           TVM  QL+ L+  G+P+  +L  LLE  ENP L+  +A++R ++ EG++LAAA++    +F  + + MVEAGE +G    +L R ++++++    R  +   L+YP ++ V+  S+LF L+ F+ P + +++       P+ T  ++ + +F   Y   L LI  +I++ +  + + PR     WF    L+ P++G + +   + R+SRTLG+L + G PL+ +L + R  L+N  L ++L  A+  I  GEG++  LAR    PP++ Q +  GEK+G LE ML   AS YE E++ +   +   +EP +I+++G  VG +V+S+LLP+  +S+
Sbjct:   30 QKLRASGIFPISLKEEQKEASEVGTKDISLRWFTKRIKLADITVMTRQLATLVGAGLPLVTSLNGLLEQTENPALKRIIAQIREKVNEGNSLAAALSEHPRVFSPLFVNMVEAGEASGTLELVLERLADFIEQQQSLRYRIYATLAYPTIMLVIGASILFFLITFVIPAVTKIFEKTQQALPLPTVILIGISNFLKHYWWLLGLIFVVIMIGFKKFVSTPRGRE--WFDRVKLTFPIMGKINRKIAVARFSRTLGVLLKNGTPLLTALDIVRNILNNVVLSKVLERAKDEIVEGEGIAGPLARTKAFPPIVIQMIGVGEKSGTLEDMLEKVASSYEEEIEMKINALTALLEPVMILVMGAAVGFIVLSILLPILQMST 405          
BLAST of mRNA_P-wetherbeei_contig19644.1.1 vs. uniprot
Match: A0A1F9CDV2_9DELT (General secretion pathway protein F n=1 Tax=Deltaproteobacteria bacterium RBG_13_65_10 TaxID=1797835 RepID=A0A1F9CDV2_9DELT)

HSP 1 Score: 189 bits (480), Expect = 9.090e-53
Identity = 119/384 (30.99%), Postives = 211/384 (54.95%), Query Frame = 1
Query:    7 KLKSQGMFPTNVTQDVGRRGKAAGADSL----------------------AYTVMQLSALLRCGIPVDEALESLLETEENPRLRMALARVRVRLREGSTLAAAMAVE-EIFPQMLLRMVEAGEETGKPGEILGRYSEYLKRDLEHRQALVGALSYPAVLTVLSVSLLFGLLYFLTPVLNEMYNSLGVEKPMMTRSVLALGDFATTYGLYLIAGLIVVVWAA---WAAIP--RATRDSWFLSIPLIGPMLKCGLMERWSRTLGMLHEAGVPLVRSLQLSRESLDNEALGQLLAGAEKGIERGEGLSVTLARVYLIPPLLQQFLRTGEKTGELELMLNSAASFYERELDRRRQIMVRFMEPALIVILGIMVGCLVMSVLLPLADIS 1074
            KL+  G+FPT++T++   R  A+  +++                      A    QL+ LL  GIPV EAL +L++  ENP +++AL +VR R+ EG++LA AMA   ++F  + + M+ AGE  G    +L R ++YL+  +  R  +  A+ YP V++ +++  +  L+ F+ P L E++ SL    P+ T  ++ + DF   +  + +  L++  W     W A    R   D++ L  P++G +++   + R+S+TL  L  +G+PL+RSL++ R  +DN  L + L  A + I  G  ++  L R    PPLL   +  GEK+GELE ML   A  Y+ E++     M  ++EP +I+++  +VG +++S+L+P+ +I+
Sbjct:   31 KLRKTGIFPTDLTEEHRERSAASVGEAVGEVFRKQFSFRQLLTRVTETDKAIVTRQLATLLGAGIPVVEALTALIDQVENPAIQVALGQVRQRVNEGASLADAMAQHPKVFSTLYVNMIRAGEAGGALEVVLERLADYLESQVRLRNRVSAAMVYPIVMSCMALIFIGVLVTFVVPKLTEIFKSLNQPLPLATVVLIKVSDFMKVWW-WAVLVLLIAAWFGFRRWKASEKGRPAWDAFLLRTPVVGRLVRTISVARFSKTLATLLSSGIPLIRSLEIVRNIMDNAVLEKALERARESITEGASIAQPLRRSGQFPPLLTHMIAIGEKSGELEAMLGKVAEAYDNEVETSIAKMTSWLEPVMILVMAGIVGLIIISILIPIFNIN 413          
BLAST of mRNA_P-wetherbeei_contig19644.1.1 vs. uniprot
Match: A0A372BZI4_9GAMM (Type II secretion system protein GspF n=2 Tax=Wenzhouxiangella TaxID=1676142 RepID=A0A372BZI4_9GAMM)

HSP 1 Score: 189 bits (481), Expect = 1.150e-52
Identity = 120/369 (32.52%), Postives = 210/369 (56.91%), Query Frame = 1
Query:   10 LKSQGMFPTNVT-----QDVGRRGKAAGADSLAYTVMQLSALLRCGIPVDEALESLLETEENPRLRMALARVRVRLREGSTLAAAMAVE-EIFPQMLLRMVEAGEETGKPGEILGRYSEYLKRDLEHRQALVGALSYPAVLTVLSVSLLFGLLYFLTPVLNEMYNSLGVEKPMMTRSVLALGDFATTYGLYLIAGLIVVVWAAWAAIP----RATRDSWFLSIPLIGPMLKCGLMERWSRTLGMLHEAGVPLVRSLQLSRESLDNEALGQLLAGAEKGIERGEGLSVTLARVYLIPPLLQQFLRTGEKTGELELMLNSAASFYERELDRRRQIMVRFMEPALIVILGIMVGCLVMSVLLPLADISSKLN 1086
            L+ +G+ P  V      Q  GR G        A  + QLS LL  G+P++EAL  L+E  +  R R  L  +R R+ EG +L+AAMA +  +FP +    V AGE  G    +L R + + ++  E R++   AL YP VLTV+++++++GL+ F+ P +  +++    E P++TRS+L L DF   +G  L+  L+++ + A  A+     R   D+W L++P++G + +       +RTL +L  + VPLV +L+++ E + N  +   +A A   +  G  L+  L +   +PP+ ++ L  GE++GEL  ML  AA   EREL    Q+++  ++PALI+++G++V  +V++++LP+  +S  L+
Sbjct:   74 LRERGLIPLEVQGVDEGQRSGRAGFGGQGRERALLLRQLSTLLTAGLPLEEALSVLVEQADQSRSRRQLGAIRARVMEGQSLSAAMAEQPRLFPPLYSASVAAGERAGALDGVLDRLAGFAEQREEMRRSFSLALVYPVVLTVIAIAVVWGLIGFVVPRVVGVFDQASRELPLLTRSLLGLSDFIAGWGWLLLIVLVLLGFGAVVALRQPGIRQRFDAWLLNVPVLGRLARSRETATLTRTLAILVASTVPLVDALRVAGEVVGNRQIRADVATAGAQVREGVSLTRALGQFDWLPPMARRLLAGGERSGELAPMLEQAARLQERELQAASQLLLAVLQPALILLVGLVVLYIVLAIMLPIMSMSQLLS 442          
BLAST of mRNA_P-wetherbeei_contig19644.1.1 vs. uniprot
Match: UPI00040B09D3 (type II secretion system inner membrane protein GspF n=2 Tax=unclassified Thioalkalivibrio TaxID=2621013 RepID=UPI00040B09D3)

HSP 1 Score: 188 bits (478), Expect = 1.280e-52
Identity = 124/368 (33.70%), Postives = 207/368 (56.25%), Query Frame = 1
Query:   10 LKSQGMFPTNVT---QDVGRRGK--AAGADS---LAYTVMQLSALLRCGIPVDEALESLLETEENPRLRMALARVRVRLREGSTLAAAMA-VEEIFPQMLLRMVEAGEETGKPGEILGRYSEYLKRDLEHRQALVGALSYPAVLTVLSVSLLFGLLYFLTPVLNEMYNSLGVEKPMMTRSVLALGDFATTYGLYLIAGLIV--VVWAAWAAIP--RATRDSWFLSIPLIGPMLKCGLMERWSRTLGMLHEAGVPLVRSLQLSRESLDNEALGQLLAGAEKGIERGEGLSVTLARVYLIPPLLQQFLRTGEKTGELELMLNSAASFYERELDRRRQIMVRFMEPALIVILGIMVGCLVMSVLLPLADIS 1074
            L+ QG+ P  V    +  GR G+  A G  S   LA    Q++ L   GIP+ E L+++    ENP +   L  VR R+ EG  L+AA+A    +FP +    V AGE+ G+   +L R +++L+   E RQ +  AL YP +LT++++++  GL+ ++ P +  +++      P +T +++ L D A  YG++++AGL    VV+A     P  RA  D W LS+P++G  ++     R++RTLG+L E+GVPL+ +L+   E ++N  +   +  A   I  G G++ +L      PP++   +R+GE +G+L  ML  AA   E E+ RR    +   EP LIV +G++V  +VM++LLP+ D++
Sbjct:   32 LREQGLKPLEVAAIEEKPGRSGRTRAVGRISRMDLASATRQMATLAEAGIPIAEWLDTVATQSENPAVSQVLRAVRTRVVEGQPLSAALAEFPRVFPSIYRSTVAAGEDAGQLDGVLSRLADHLEAQHEMRQKIGVALIYPIILTLVAIAVTVGLVVYVVPEVVAVFDDTANTLPWITVALITLSDGARGYGVWVLAGLAAAGVVFARSWRRPGFRARFDGWLLSVPVVGRTVQAVNTARFTRTLGILTESGVPLLDALKTGAEVIENRPMRDSVEKASGRIREGAGIAASLQETGAFPPIVIHLIRSGEGSGQLNRMLERAARTQEGEVQRRISTAMGLFEPLLIVTMGLVVMGIVMAILLPIFDMN 399          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19644.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7X8XQJ4_9BURK4.200e-12754.02Type II secretion system F family protein n=1 Tax=... [more]
A0A355TR81_9BACT4.200e-12754.02Uncharacterized protein n=1 Tax=bacterium UBP9_UBA... [more]
A0A7V3KX32_9DELT1.130e-5530.77General secretion pathway protein F n=1 Tax=Deltap... [more]
A0A7C4PVJ3_9DELT2.230e-5531.37Type II secretion system protein GspF n=2 Tax=Delt... [more]
A0A7C1ZEK1_9CHLR8.300e-5434.94Type II secretion system F family protein n=1 Tax=... [more]
UPI0020117E289.370e-5431.28type II secretion system inner membrane protein Gs... [more]
A0A7C1UX48_9DELT7.350e-5332.01Type II secretion system protein GspF n=3 Tax=Delt... [more]
A0A1F9CDV2_9DELT9.090e-5330.99General secretion pathway protein F n=1 Tax=Deltap... [more]
A0A372BZI4_9GAMM1.150e-5232.52Type II secretion system protein GspF n=2 Tax=Wenz... [more]
UPI00040B09D31.280e-5233.70type II secretion system inner membrane protein Gs... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19644contigP-wetherbeei_contig19644:181..1272 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog1517416.IDAT_05635
Preferred namegspF
PFAMsT2SSF
Model size1092
Max annot lvl1236|Gammaproteobacteria
KEGG koko:K02455
KEGG TC3.A.15
KEGG Pathwayko03070,ko05111,map03070,map05111
KEGG ModuleM00331
Hectar predicted targeting categoryother localisation
GOsGO:0002790,GO:0005575,GO:0005623,GO:0005886,GO:0006810,GO:0008104,GO:0008150,GO:0009306,GO:0009987,GO:0015031,GO:0015628,GO:0015833,GO:0016020,GO:0032940,GO:0033036,GO:0042886,GO:0044464,GO:0045184,GO:0046903,GO:0051179,GO:0051234,GO:0055085,GO:0071702,GO:0071705,GO:0071806,GO:0071944,GO:0098776
Exons1
Evalue3.99e-54
EggNOG OGsCOG1459@1|root,COG1459@2|Bacteria,1MV4U@1224|Proteobacteria,1RQ86@1236|Gammaproteobacteria,2QFV4@267893|Idiomarinaceae
Descriptiongeneral secretion pathway protein
Cds size1068
COG categoryU
BRITEko00000,ko00001,ko00002,ko02044
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186177.9852698-CDS-P-wetherbeei_contig19644:180..12481683186177.9852698-CDS-P-wetherbeei_contig19644:180..1248Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19644 181..1248 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186178.0047631-UTR-P-wetherbeei_contig19644:1248..12721683186178.0047631-UTR-P-wetherbeei_contig19644:1248..1272Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig19644 1249..1272 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19644.1.1prot_P-wetherbeei_contig19644.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19644 181..1248 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19644.1.1

>prot_P-wetherbeei_contig19644.1.1 ID=prot_P-wetherbeei_contig19644.1.1|Name=mRNA_P-wetherbeei_contig19644.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=356bp
MFPTNVTQDVGRRGKAAGADSLAYTVMQLSALLRCGIPVDEALESLLETE
ENPRLRMALARVRVRLREGSTLAAAMAVEEIFPQMLLRMVEAGEETGKPG
EILGRYSEYLKRDLEHRQALVGALSYPAVLTVLSVSLLFGLLYFLTPVLN
EMYNSLGVEKPMMTRSVLALGDFATTYGLYLIAGLIVVVWAAWAAIPRAT
RDSWFLSIPLIGPMLKCGLMERWSRTLGMLHEAGVPLVRSLQLSRESLDN
EALGQLLAGAEKGIERGEGLSVTLARVYLIPPLLQQFLRTGEKTGELELM
LNSAASFYERELDRRRQIMVRFMEPALIVILGIMVGCLVMSVLLPLADIS
SKLNV*
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mRNA from alignment at P-wetherbeei_contig19644:181..1272-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19644.1.1 ID=mRNA_P-wetherbeei_contig19644.1.1|Name=mRNA_P-wetherbeei_contig19644.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1092bp|location=Sequence derived from alignment at P-wetherbeei_contig19644:181..1272- (Phaeothamnion wetherbeei SAG_119_79)
TACCAGAAGCTCAAGAGCCAGGGGATGTTCCCCACCAACGTCACCCAGGA CGTGGGGCGGCGTGGTAAGGCTGCCGGTGCCGACTCCCTGGCGTATACCG TCATGCAGCTGTCGGCGCTGCTGCGCTGCGGCATTCCGGTGGATGAGGCC CTGGAATCGCTGCTCGAGACGGAGGAAAATCCGCGCCTTCGTATGGCGCT AGCGCGTGTGCGCGTGCGACTTCGCGAGGGCTCCACGCTGGCGGCGGCGA TGGCGGTCGAGGAGATTTTTCCGCAGATGCTCCTGCGTATGGTGGAAGCC GGCGAGGAAACCGGCAAGCCGGGCGAGATTCTGGGCCGCTATTCGGAATA CCTCAAGCGCGATCTCGAGCACCGCCAGGCCCTTGTGGGCGCTCTTTCTT ATCCAGCTGTGTTGACCGTTCTCTCGGTTTCGTTGCTCTTTGGATTGCTT TATTTTCTGACGCCCGTCCTTAATGAGATGTATAACTCGTTGGGTGTCGA GAAGCCTATGATGACGCGCAGCGTGCTGGCGTTGGGCGATTTCGCGACGA CCTACGGGCTCTATCTGATCGCGGGTTTGATCGTCGTCGTCTGGGCCGCC TGGGCGGCTATCCCGCGCGCCACGCGCGATTCCTGGTTTCTCTCCATCCC TTTGATCGGGCCCATGCTCAAGTGTGGTCTGATGGAACGCTGGTCGCGAA CTCTGGGCATGCTCCACGAGGCCGGTGTTCCGCTGGTTCGCTCTCTCCAG TTGAGCCGCGAGTCGCTCGACAACGAGGCGCTCGGCCAGCTTTTGGCGGG CGCGGAAAAGGGGATCGAGCGCGGCGAGGGGCTCTCAGTGACGCTGGCGC GAGTCTATCTCATTCCGCCTCTGCTCCAGCAGTTTCTGCGCACCGGAGAA AAGACGGGTGAGCTCGAGCTGATGCTCAATTCCGCTGCTTCCTTCTACGA GCGCGAACTCGACCGCCGACGCCAGATCATGGTGCGCTTCATGGAGCCGG CGCTGATCGTAATCCTCGGTATCATGGTGGGATGCCTGGTGATGTCGGTG CTACTTCCGCTGGCGGACATCTCGTCCAAGCTGAACGTATGA
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Coding sequence (CDS) from alignment at P-wetherbeei_contig19644:181..1272-

>mRNA_P-wetherbeei_contig19644.1.1 ID=mRNA_P-wetherbeei_contig19644.1.1|Name=mRNA_P-wetherbeei_contig19644.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=1068bp|location=Sequence derived from alignment at P-wetherbeei_contig19644:181..1272- (Phaeothamnion wetherbeei SAG_119_79)
ATGTTCCCCACCAACGTCACCCAGGACGTGGGGCGGCGTGGTAAGGCTGC
CGGTGCCGACTCCCTGGCGTATACCGTCATGCAGCTGTCGGCGCTGCTGC
GCTGCGGCATTCCGGTGGATGAGGCCCTGGAATCGCTGCTCGAGACGGAG
GAAAATCCGCGCCTTCGTATGGCGCTAGCGCGTGTGCGCGTGCGACTTCG
CGAGGGCTCCACGCTGGCGGCGGCGATGGCGGTCGAGGAGATTTTTCCGC
AGATGCTCCTGCGTATGGTGGAAGCCGGCGAGGAAACCGGCAAGCCGGGC
GAGATTCTGGGCCGCTATTCGGAATACCTCAAGCGCGATCTCGAGCACCG
CCAGGCCCTTGTGGGCGCTCTTTCTTATCCAGCTGTGTTGACCGTTCTCT
CGGTTTCGTTGCTCTTTGGATTGCTTTATTTTCTGACGCCCGTCCTTAAT
GAGATGTATAACTCGTTGGGTGTCGAGAAGCCTATGATGACGCGCAGCGT
GCTGGCGTTGGGCGATTTCGCGACGACCTACGGGCTCTATCTGATCGCGG
GTTTGATCGTCGTCGTCTGGGCCGCCTGGGCGGCTATCCCGCGCGCCACG
CGCGATTCCTGGTTTCTCTCCATCCCTTTGATCGGGCCCATGCTCAAGTG
TGGTCTGATGGAACGCTGGTCGCGAACTCTGGGCATGCTCCACGAGGCCG
GTGTTCCGCTGGTTCGCTCTCTCCAGTTGAGCCGCGAGTCGCTCGACAAC
GAGGCGCTCGGCCAGCTTTTGGCGGGCGCGGAAAAGGGGATCGAGCGCGG
CGAGGGGCTCTCAGTGACGCTGGCGCGAGTCTATCTCATTCCGCCTCTGC
TCCAGCAGTTTCTGCGCACCGGAGAAAAGACGGGTGAGCTCGAGCTGATG
CTCAATTCCGCTGCTTCCTTCTACGAGCGCGAACTCGACCGCCGACGCCA
GATCATGGTGCGCTTCATGGAGCCGGCGCTGATCGTAATCCTCGGTATCA
TGGTGGGATGCCTGGTGATGTCGGTGCTACTTCCGCTGGCGGACATCTCG
TCCAAGCTGAACGTATGA
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