mRNA_P-wetherbeei_contig19613.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig19613.1.1
Unique NamemRNA_P-wetherbeei_contig19613.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
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BLAST of mRNA_P-wetherbeei_contig19613.1.1 vs. uniprot
Match: A0A8J2SG83_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SG83_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 8.440e-6
Identity = 31/67 (46.27%), Postives = 38/67 (56.72%), Query Frame = 1 
Query:    4 QDGGYWLPYDPGAAAQIEAAFEAGDATTTTYSATGGRNGTGAGYKIDLGSMNQVNSSTGFTRRVRRI 204
            +DG  W  +DPG AAQ+E A EAG AT   YS  G        Y++D     QVN +TGF R VRR+
Sbjct:    6 RDGTAWRDFDPGLAAQLERAREAGQATCV-YSFRG------QPYEVDFQQNTQVNKNTGFARDVRRV 65
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19613.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A8J2SG83_9STRA8.440e-646.27Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig19613contigP-wetherbeei_contig19613:148..351 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog2880.D8LIP8
Preferred nameDTX3L
PFAMszf-C3HC4,zf-C3HC4_2,zf-RING_2
Model size204
Max annot lvl2759|Eukaryota
KEGG koko:K06058
KEGG Pathwayko04330,map04330
Hectar predicted targeting categoryother localisation
GOsGO:0000209,GO:0000323,GO:0002230,GO:0002682,GO:0002697,GO:0002831,GO:0003674,GO:0003824,GO:0004842,GO:0004857,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005764,GO:0005773,GO:0005829,GO:0006139,GO:0006259,GO:0006281,GO:0006282,GO:0006302,GO:0006325,GO:0006355,GO:0006464,GO:0006508,GO:0006511,GO:0006513,GO:0006725,GO:0006807,GO:0006810,GO:0006950,GO:0006974,GO:0006996,GO:0007034,GO:0007041,GO:0008047,GO:0008150,GO:0008152,GO:0008333,GO:0009056,GO:0009057,GO:0009889,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009987,GO:0010390,GO:0010468,GO:0010556,GO:0010557,GO:0010604,GO:0010605,GO:0010628,GO:0016043,GO:0016192,GO:0016567,GO:0016569,GO:0016570,GO:0016574,GO:0016740,GO:0019219,GO:0019222,GO:0019538,GO:0019787,GO:0019899,GO:0019941,GO:0030163,GO:0030234,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031328,GO:0031329,GO:0031331,GO:0031347,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031974,GO:0031981,GO:0032092,GO:0032101,GO:0032268,GO:0032269,GO:0032446,GO:0032879,GO:0032880,GO:0032991,GO:0033522,GO:0033523,GO:0033554,GO:0034641,GO:0035561,GO:0035563,GO:0036211,GO:0042393,GO:0043085,GO:0043086,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043393,GO:0043412,GO:0043632,GO:0043900,GO:0044092,GO:0044093,GO:0044237,GO:0044238,GO:0044248,GO:0044257,GO:0044260,GO:0044265,GO:0044267,GO:0044389,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0045739,GO:0045893,GO:0045935,GO:0046483,GO:0046907,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0050688,GO:0050691,GO:0050789,GO:0050790,GO:0050794,GO:0050896,GO:0051052,GO:0051054,GO:0051098,GO:0051099,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051246,GO:0051248,GO:0051252,GO:0051254,GO:0051276,GO:0051338,GO:0051340,GO:0051347,GO:0051348,GO:0051352,GO:0051438,GO:0051444,GO:0051603,GO:0051641,GO:0051649,GO:0051716,GO:0051865,GO:0060255,GO:0060341,GO:0065007,GO:0065009,GO:0070013,GO:0070647,GO:0070936,GO:0071704,GO:0071840,GO:0080090,GO:0080134,GO:0080135,GO:0090304,GO:0097677,GO:0098772,GO:0140096,GO:1900180,GO:1900182,GO:1901360,GO:1901564,GO:1901565,GO:1901575,GO:1901664,GO:1901666,GO:1902680,GO:1902965,GO:1902966,GO:1903320,GO:1903321,GO:1903506,GO:1903508,GO:1903827,GO:1903829,GO:1905666,GO:1905668,GO:2000112,GO:2000644,GO:2000646,GO:2000779,GO:2000781,GO:2001020,GO:2001022,GO:2001032,GO:2001034,GO:2001141
Exons1
Evalue4.41e-08
EggNOG OGs2CTH7@1|root,2RGAW@2759|Eukaryota
EC2.3.2.27
Descriptionregulation of NAD ADP-ribosyltransferase activity
Cds size204
COG categoryO
BRITEko00000,ko00001,ko01000,ko04121
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186177.3045309-CDS-P-wetherbeei_contig19613:147..3511683186177.3045309-CDS-P-wetherbeei_contig19613:147..351Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig19613 148..351 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig19613.1.1prot_P-wetherbeei_contig19613.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig19613 148..351 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig19613.1.1

>prot_P-wetherbeei_contig19613.1.1 ID=prot_P-wetherbeei_contig19613.1.1|Name=mRNA_P-wetherbeei_contig19613.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=68bp
MQDGGYWLPYDPGAAAQIEAAFEAGDATTTTYSATGGRNGTGAGYKIDLG
SMNQVNSSTGFTRRVRRI
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mRNA from alignment at P-wetherbeei_contig19613:148..351+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig19613.1.1 ID=mRNA_P-wetherbeei_contig19613.1.1|Name=mRNA_P-wetherbeei_contig19613.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=204bp|location=Sequence derived from alignment at P-wetherbeei_contig19613:148..351+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCAAGACGGCGGGTACTGGCTCCCCTACGATCCGGGGGCCGCCGCCCA
GATTGAGGCGGCCTTTGAGGCCGGTGATGCCACGACGACGACGTATAGCG
CCACTGGCGGCCGCAATGGGACTGGCGCCGGTTACAAGATCGACCTCGGG
TCGATGAACCAGGTCAACAGCTCCACAGGCTTCACACGCCGTGTCCGACG
CATC
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Coding sequence (CDS) from alignment at P-wetherbeei_contig19613:148..351+

>mRNA_P-wetherbeei_contig19613.1.1 ID=mRNA_P-wetherbeei_contig19613.1.1|Name=mRNA_P-wetherbeei_contig19613.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=204bp|location=Sequence derived from alignment at P-wetherbeei_contig19613:148..351+ (Phaeothamnion wetherbeei SAG_119_79)
ATGCAAGACGGCGGGTACTGGCTCCCCTACGATCCGGGGGCCGCCGCCCA
GATTGAGGCGGCCTTTGAGGCCGGTGATGCCACGACGACGACGTATAGCG
CCACTGGCGGCCGCAATGGGACTGGCGCCGGTTACAAGATCGACCTCGGG
TCGATGAACCAGGTCAACAGCTCCACAGGCTTCACACGCCGTGTCCGACG
CATC
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