mRNA_P-wetherbeei_contig1957.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_P-wetherbeei_contig1957.1.1
Unique NamemRNA_P-wetherbeei_contig1957.1.1
TypemRNA
OrganismPhaeothamnion wetherbeei SAG_119_79 (Phaeothamnion wetherbeei SAG_119_79)
Homology
BLAST of mRNA_P-wetherbeei_contig1957.1.1 vs. uniprot
Match: A0A5D6XWI5_9STRA (Importin N-terminal domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XWI5_9STRA)

HSP 1 Score: 139 bits (351), Expect = 1.280e-31
Identity = 117/347 (33.72%), Postives = 169/347 (48.70%), Query Frame = 3
Query:  441 RYEALKCLGQMSEDFCEADDSVKDYGLRESFQKRFSGVVVPVLVAAVA-PQGVNARLPRVQALACSSIARFCQPEHC-GREQLPEAGARALLAPLYELLRDSPWLSVKEESLAAVANIATVIGPGFAGFYDAFLPLATAILADATSVVMRTISGXXXXXXXXXGHCRRDGPNAARRNAAAAAARLRGNAMEFLALMGRAVGRARFEGDARAAMALLL-------INSPGAAALLAAAARIGGVMGRGFSRYLDALVPRLLRIAAMDASFRIVDTDITLG-----GGSXXXXDGV--EAFNDRRQTISINTSAAQDKEAACRALFQFCVDLGAAFAPFAADVLVALVP 1433
            +Y AL  LGQ++EDF E +         ++FQ R+   ++P L A VA  QGV     R +ALA S +  FC    C  +  LP A A  LL  L+  LR  P   V+E+++ AVA++A VIG  FA FYD F+PLA  +L  A+                                     A LRG AME +AL+G+AVG+ RF GDA+  M +L+       +  P    +  +  RIG ++ R F  YL  ++P L++ A +     IV +D+  G     G +    D V  +     ++ + INTSA +DK  AC  L+Q  +DL  AF P+ A+V   L+P
Sbjct:  416 QYAALHSLGQLAEDFGEVEKG-------KNFQARYHATLLPALTALVAHEQGVL----RTRALAASVVINFCNTNVCKAKHVLPHAPA--LLEALFNALRTCPR-QVQEQAITAVASVAKVIGADFARFYDIFIPLAKDVLVHASGAEF---------------------------------ALLRGKAMESIALIGQAVGKERFAGDAKEVMEILIRVQASEALEGPEVQYVAQSCVRIGAILKRDFVPYLPHVIPPLIQQAQIQPD--IVLSDLAEGESEEDGKTADGKDSVTVDIRGVGKKRLQINTSALEDKTNACNMLYQSALDLEGAFYPYVAEVADVLIP 713          
BLAST of mRNA_P-wetherbeei_contig1957.1.1 vs. uniprot
Match: A0A2P6NWV8_9EUKA (TOG domain-containing protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NWV8_9EUKA)

HSP 1 Score: 107 bits (267), Expect = 6.130e-21
Identity = 99/339 (29.20%), Postives = 147/339 (43.36%), Query Frame = 3
Query:  441 RYEALKCLGQMSEDFCEADDSVKDYGLRESFQKRFSGVVVPVLVAAVAPQGVNARLPRVQALACSSIARFCQPEHCGREQLPEAGARALLAPLYELLRDSPWLSVKEESLAAVANIATVIGPGFAGFYDAFLPLATAILADATSVVMRTISGXXXXXXXXXGHCRRDGPNAARRNAAAAAARLRGNAMEFLALMGRAVGRARFEGDARAAMALLL--------INSPGAAALLAAAARIGGVMGRGFSRYLDALVPRLLRIAAMDASFRIVDTDITLGGGSXXXXDGVEAFNDRRQTISINTSAAQDKEAACRALFQFCVDLGAAFAPFAADVLVALVP 1433
            R+ A   +GQMS DF               FQ++F G V+P L+  +     +   PRVQ  A +++  FC+        L E   R LL  LY L      L V+E+ + AVA IA      F  +YD F+P+  ++L+ A     R                                  LRG  ME ++L+G AVG+ +F GDA+  M L++         + P    LL + ARI   MG+ F  YL  ++P LL  A +     +++ D           DG E  +   Q + INTSA ++K  AC  L+ +  +LG+ F P+  +V   LVP
Sbjct:  417 RWAACNAVGQMSTDFLP------------DFQEQFHGSVLPALINTMD----DTANPRVQGHAAAAVINFCES---ASPSLLEPYLRTLLHKLYVLFMGGKVL-VQEQVVTAVAAIADAAKGNFIEYYDTFMPVLKSVLSTANGKEHRN---------------------------------LRGKTMECISLIGGAVGKEKFYGDAKHVMELMMNTQNSALESDDPQIGFLLQSWARICKCMGQDFVPYLPYVMPPLLHSAKLAPEVTVLEADEI---PEQYGNDGWEFISVGDQRVGINTSAMEEKSTACGMLYCYANELGSGFFPYVEEVTRLLVP 699          
BLAST of mRNA_P-wetherbeei_contig1957.1.1 vs. uniprot
Match: UPI0002657C43 (importin-5 n=1 Tax=Galendromus occidentalis TaxID=34638 RepID=UPI0002657C43)

HSP 1 Score: 97.4 bits (241), Expect = 1.090e-17
Identity = 96/346 (27.75%), Postives = 151/346 (43.64%), Query Frame = 3
Query:  441 RYEALKCLGQMSEDFCEADDSVKDYGLRESFQKRFSGVVVPVLVAAVAPQGVNARLPRVQALACSSIARFCQPEHCGRE---QLPEAGARALLAPLYELLRDSPWLSVK---EESLAAVANIATVIGPGFAGFYDAFLPLATAILADATSVVMRTISGXXXXXXXXXGHCRRDGPNAARRNAAAAAARLRGNAMEFLALMGRAVGRARFEGDARAAMALLLIN---------SPGAAALLAAAARIGGVMGRGFSRYLDALVPRLLRIAAMDASFRIVDTDITLGGGSXXXXDGVEAFNDRRQTISINTSAAQDKEAACRALFQFCVDLGAAFAPFAADVLVALVP 1433
            RY A+ CLGQM+ DF              +F+K+F   V+P L   +A      R PRVQA A +++  F   E C ++   Q     A  L   L   + +     +K   E+ L   + +A   G  F  FYD+F+P    I+  A +  +                                   LRG A+E ++L+G AVG+ RF GDA   M LLL N         SP  + ++ A  R+  ++GR F RYL +++P +++ AA+     ++D D             V +F+D R ++ I T+  ++K  A   L  F  +L  +F P+ ++VL   VP
Sbjct:  411 RYAAINCLGQMANDFAP------------TFEKKFHSTVLPRLCDIMADN----RHPRVQAHAGAALVNFF--EECPKKIIVQYLSVIAPPLAGILQTQMNELATRGLKLVLEQVLVTTSALADSCGKDFIPFYDSFVPQLKYIIERANTKELEL---------------------------------LRGKAIECVSLIGVAVGKERFTGDAAGVMELLLANEIHLHLAEDSPLLSYMIYAWMRLCKILGREFERYLPSVMPSVMKTAALSPQISLIDEDEVPDEADNEEWTYV-SFDDHR-SVGIRTTGLEEKATAFEMLVCFSKELKESFGPYVSEVLKVAVP 703          
BLAST of mRNA_P-wetherbeei_contig1957.1.1 vs. uniprot
Match: Q9VN44_DROME (FI07923p n=25 Tax=Sophophora TaxID=32341 RepID=Q9VN44_DROME)

HSP 1 Score: 87.4 bits (215), Expect = 1.810e-14
Identity = 89/351 (25.36%), Postives = 149/351 (42.45%), Query Frame = 3
Query:  441 RYEALKCLGQMSEDFCEADDSVKDYGLRESFQKRFSGVVVPVLVAAVAPQGVNARLPRVQALACSSIARFCQPEHCGREQLPE------AGARALLAPLYELLRDSPWLSVKEESLAAVANIATVIGPGFAGFYDAFLPLATAILADATSVVMRTISGXXXXXXXXXGHCRRDGPNAARRNAAAAAARLRGNAMEFLALMGRAVGRARFEGDARAAMALLLIN----------SPGAAALLAAAARIGGVMGRGFSRYLDALVPRLLRIAAMDASFRIVDTDITLGGGSXXXXDGVEAFN----DRRQTISINTSAAQDKEAACRALFQFCVDLGAAFAPFAADVLVALVP 1433
            RY A   +GQMS DF +            +F+K+F   V+P L++ +     +   PRVQA A +++  F   E C +  L        A    +L   ++ L +     V E+ +  +A++A      F  +YD  +P    I+ +A S  +R                                  LRG  +E ++L+G AVGR +F GDA   M +LL+N           P  + L+ A AR+  ++G+ F +YL  ++  ++R A M     ++D D           DG   ++      +Q  +I T+   DK +AC  L  +  +L   FA +A DV+  ++P
Sbjct:  417 RYAACNAIGQMSTDFAQ------------TFEKKFHSQVIPGLLSLLD----DVENPRVQAHAGAALVNFS--EDCPKNILTRYLDGIMAKLETILNSKFKELVEKGNKLVLEQVVTTIASVADTCESEFVAYYDRLMPCLKFIIQNANSDDLRM---------------------------------LRGKTIECVSLIGLAVGREKFIGDAGEVMDMLLVNHTEGGELADDDPQTSYLITAWARMCKILGKQFEQYLPLVMGPVMRTATMKPEVAMLDND------EVEDIDGDVDWSFINLGEQQNFAIRTAGMDDKASACEMLVCYARELKEGFAEYAEDVVRQMLP 710          
BLAST of mRNA_P-wetherbeei_contig1957.1.1 vs. uniprot
Match: A0A1I7S0C7_BURXY ((pine wood nematode) hypothetical protein n=1 Tax=Bursaphelenchus xylophilus TaxID=6326 RepID=A0A1I7S0C7_BURXY)

HSP 1 Score: 87.0 bits (214), Expect = 2.400e-14
Identity = 91/349 (26.07%), Postives = 145/349 (41.55%), Query Frame = 3
Query:  441 RYEALKCLGQMSEDFCEADDSVKDYGLRESFQKRFSGVVVPVLVAAVAPQGVNARLPRVQALACSSIARFCQPEHCGREQLPEAGARALLAPLYELLR-----------DSPWLSVKEESLAAVANIATVIGPGFAGFYDAFLPLATAILADATSVVMRTISGXXXXXXXXXGHCRRDGPNAARRNAAAAAARLRGNAMEFLALMGRAVGRARFEGDARAAMALLLINS--------PGAAALLAAAARIGGVMGRGFSRYLDALVPRLLRIAAMDASFRIVDTDITLGGGSXXXXDGVEAFNDRRQTISINTSAAQDKEAACRALFQFCVDLGAAFAPFAADVLVALV 1430
            RY    CLGQMS DF              + QK+    V+  L+        +   PRV A A +++  FC       E+ P+    A L P+ + L            +S    V E+ +  +A +A      F  +Y         IL+++ S  +++                                 LRG  ME L+L+G AVGR +F GDA   M  LL +         P  + ++++ AR+  VMG  F+ YL  ++P +++ A+M  +  I+D D   G         + +  D+R +I + T+  +DK  AC  L  F  DLGAAF P+  +VL  ++
Sbjct:  417 RYAVCNCLGQMSTDFAP------------TVQKKCHERVLGALIETAG----DLNTPRVAAHAGAALVNFC-------EECPKNIMAAYLKPIMDKLEYVLEHTFKHMLESGKKLVLEQIITTIAAVADAAENTFVDYYQRLSHPLKYILSNSNSHELKS---------------------------------LRGKTMECLSLIGIAVGREKFRGDAAEIMNTLLQSGLKFDEEDDPELSYMISSWARLCKVMGSEFAPYLPHVMPSIMKSASMQPNVSILDDDEVEGYDEDDW--NIISLGDQR-SIGVKTAGLEDKLTACEMLVSFARDLGAAFGPYIEEVLTLMI 706          
BLAST of mRNA_P-wetherbeei_contig1957.1.1 vs. uniprot
Match: A0A7S0X158_9CHLO (Hypothetical protein n=1 Tax=Chlamydomonas leiostraca TaxID=1034604 RepID=A0A7S0X158_9CHLO)

HSP 1 Score: 85.5 bits (210), Expect = 7.480e-14
Identity = 96/339 (28.32%), Postives = 146/339 (43.07%), Query Frame = 3
Query:  441 RYEALKCLGQMSEDFCEADDSVKDYGLRESFQKRFSGVVVPVLVAAVAPQGVNARLPRVQALACSSIARFCQPEHCGREQLPEAGARALLAPLYELLRDSPWLSVKEESLAAVANIATVIGPGFAGFYDAFLPLATAILADATSVVMRTISGXXXXXXXXXGHCRRDGPNAARRNAAAAAARLRGNAMEFLALMGRAVGRARFEGDARAAMALLL--------INSPGAAALLAAAARIGGVMGRGFSRYLDALVPRLLRIAAMDASFRIVDTDITLGGGSXXXXDGVEAFNDRRQTISINTSAAQDKEAACRALFQFCVDLGAAFAPFAADVLVALVP 1433
            R+ A + LGQM  D            L    Q+R +  ++P L+ A+     +   PRVQA A +++  F   E   +E LP      L+  L  LL+    L V+E +L A+A++A      F  +YD  +PL  +IL  AT    R                                  LRG A+E ++L+G AVGR RF G+A   +  L          + P    +L A AR+   +G  F  YL  ++P L++ A ++A  +I D D       XXXX  VE      + ++I TS+ ++K  AC  L  +  +L   F P+   V   +VP
Sbjct:  428 RWSACQALGQMCTD------------LGPQIQERCAPRILPALMVAMD----DFSHPRVQAHAAAAVVNFS--EGADQELLPPH-LDTLITKLLLLLQHGKKL-VQEGALTAMASVADCSQTLFIKYYDTVMPLLLSILVGATDKSHRL---------------------------------LRGKALECISLVGMAVGRDRFRGEAAKVLQWLQGLQAMEMDADDPTLGYMLQAGARLCKCLGHEFLPYLPIVMPPLIKSATLEADIKISDADDXXXXXXXXXXXDVEHIRMGDKLVAIRTSSLEEKATACNMLCCYADELKDGFFPYVKQVADIMVP 713          
BLAST of mRNA_P-wetherbeei_contig1957.1.1 vs. uniprot
Match: B4GFA9_DROPE (GL21654 n=5 Tax=obscura group TaxID=32355 RepID=B4GFA9_DROPE)

HSP 1 Score: 84.3 bits (207), Expect = 1.740e-13
Identity = 89/354 (25.14%), Postives = 149/354 (42.09%), Query Frame = 3
Query:  441 RYEALKCLGQMSEDFCEADDSVKDYGLRESFQKRFSGVVVPVLVAAVAPQGVNARLPRVQALACSSIARFCQPEHCGREQLPE------AGARALLAPLYELLRDSPWLSVKEESLAAVANIATVIGPGFAGFYDAFLPLATAILADATSVVMRTISGXXXXXXXXXGHCRRDGPNAARRNAAAAAARLRGNAMEFLALMGRAVGRARFEGDARAAMALLLIN----------SPGAAALLAAAARIGGVMGRGFSRYLDALVPRLLRIAAMDASFRIVDTDITLGGGSXXXXDGVEAFND-------RRQTISINTSAAQDKEAACRALFQFCVDLGAAFAPFAADVLVALVP 1433
            RY A   +GQMS DF               F+K+F   V+P L+  +     + + PRVQA A +++  F   E C +  L        A   A+L   ++ L +     V E+ +  +A++A      F  +YD  +P    I+ +A S  +R                                  LRG  +E ++L+G AVGR +F GDA   M +LL+N           P  + L+ A AR+  ++G+ F +YL  ++  ++R A+M     ++D D           + +E   D        +Q  +I T+   DK +AC  L  +  +L   FA +A +V+  ++P
Sbjct:  417 RYSACNAIGQMSTDFAPI------------FEKKFHSQVIPGLMLLLD----DVQNPRVQAHAGAALVNFS--EDCPKNILTRYLDGIMAKLEAILNSKFKELVEKGNKLVLEQVVTTIASVADTCEAEFVTYYDRLMPCLKFIIQNANSEDLRM---------------------------------LRGKTIECVSLIGLAVGRDKFIGDAGEIMDMLLVNHTEGAELADDDPQTSYLITAWARMCKILGKQFEQYLPLVMGPVMRTASMKPEVAMLDND---------EVEDIEGDVDWSFINLGEQQNFAIRTAGMDDKASACEMLVCYARELKEGFAEYAEEVVRLMLP 710          
BLAST of mRNA_P-wetherbeei_contig1957.1.1 vs. uniprot
Match: A0A8I6RFH5_CIMLE (Importin N-terminal domain-containing protein n=1 Tax=Cimex lectularius TaxID=79782 RepID=A0A8I6RFH5_CIMLE)

HSP 1 Score: 79.3 bits (194), Expect = 6.710e-12
Identity = 86/341 (25.22%), Postives = 143/341 (41.94%), Query Frame = 3
Query:  441 RYEALKCLGQMSEDFCEADDSVKDYGLRESFQKRFSGVVVPVLVAAVAPQGVNARLPRVQALACSSIARFCQPEHCGRE------QLPEAGARALLAPLYELLRDSPWLSVKEESLAAVANIATVIGPGFAGFYDAFLPLATAILADATSVVMRTISGXXXXXXXXXGHCRRDGPNAARRNAAAAAARLRGNAMEFLALMGRAVGRARFEGDARAAMALLLI----------NSPGAAALLAAAARIGGVMGRGFSRYLDALVPRLLRIAAMDASFRIVDTDITLGGGSXXXXDGVEAFNDRRQTISINTSAAQDKEAACRALFQFCVDLGAAFAPFAADV 1415
            RY A   +GQMS DF              +FQK+F   V+P L+  +  +    + PRVQA   +++  F   E C  +       L       +L    E L  S    V E+ ++ +A++A   G  FA +YD  +P    I+ +A    ++                                  LRG  +E ++L+G AVGR +F GDA   M L L           + P  + L+ A AR+  ++G+ F +YL  ++  ++R A++     ++D +  +G  S        +  ++ Q   I T+  +DK +AC  L  +  +L   FAP+A  V
Sbjct:  413 RYAACNAIGQMSSDFAP------------TFQKKFHDKVIPGLLMVLNDE----KNPRVQAHGAAALINFS--EDCPSQILLLYLNLIMTKLEVILNEKLEELVLSGKKLVLEQVVSTIASVADTSGEHFAPYYDRLMPCLKYIIQNANKPELKL---------------------------------LRGKTIECVSLIGLAVGREKFIGDATEIMDLFLKTYTEGQELPDDDPQTSYLITAWARMCKILGKQFEQYLPLVIGPVMRAASLKPEVAVMDNE-DMGEVSNGEEWQFISLGEQ-QNFGIRTTGIEDKASACDMLVCYARELKEGFAPYAEPV 700          
BLAST of mRNA_P-wetherbeei_contig1957.1.1 vs. uniprot
Match: A0A4D8YMB3_SALSN (Importin N-terminal domain-containing protein n=2 Tax=Lamiales TaxID=4143 RepID=A0A4D8YMB3_SALSN)

HSP 1 Score: 78.2 bits (191), Expect = 1.580e-11
Identity = 91/341 (26.69%), Postives = 149/341 (43.70%), Query Frame = 3
Query:  441 RYEALKCLGQMSEDFCEADDSVKDYGLRESFQKRFSGVVVPVLVAAVAPQGVNARLPRVQALACSSIARFCQPEHCGREQLPEAGARALLAPLYELLRDSPWLSVKEESLAAVANIATVIGPGFAGFYDAFLPLATAILADATSVVMRTISGXXXXXXXXXGHCRRDGPNAARRNAAAAAARLRGNAMEFLALMGRAVGRARFEGDARAAMALLL--------INSPGAAALLAAAARIGGVMGRGFSRYLDALVPRLLRIAAM--DASFRIVDTDITLGGGSXXXXDGVEAFNDRRQTISINTSAAQDKEAACRALFQFCVDLGAAFAPFAADVLVALVP 1433
            R+ A+  +GQ+S D            L    Q ++   V+P L A++     + + PRVQA A S++  F   E+C  E L       ++  L  LL++S  + V+E +L A+A++A      F  +Y+A +P    IL +AT    R                                  LR  AME ++L+G AVG+  F+GDA+  M +L+         + P  + +L A AR+   +G+ F  Y+  ++P LL+ A +  D +    D+D  +        + +    D+R  I I TS  ++K  AC  L  +  +L   F P+   V   LVP
Sbjct:  435 RWAAINAIGQLSTD------------LGPDLQVQYHQRVLPALAASMD----DIQSPRVQAHAASAVLNFS--ENCTPEILTPY-LDGIVHKLLVLLQNSKQM-VQEGALTALASVADSSQELFKKYYEAVMPYLKTILVNATDKSNRM---------------------------------LRAKAMECISLVGMAVGKDIFKGDAKQVMDVLMSLQGSQLETDDPTTSYMLQAWARLCKCLGQDFLPYMSVVMPPLLQSAQLKPDVTITSADSDNEIDESDDESMETI-TLGDKR--IGIKTSVLEEKATACNMLCCYADELKEGFYPWIDQVAPILVP 719          
BLAST of mRNA_P-wetherbeei_contig1957.1.1 vs. uniprot
Match: A0A146LKY4_LYGHE (Importin-5 (Fragment) n=2 Tax=Lygus hesperus TaxID=30085 RepID=A0A146LKY4_LYGHE)

HSP 1 Score: 77.4 bits (189), Expect = 2.770e-11
Identity = 85/344 (24.71%), Postives = 148/344 (43.02%), Query Frame = 3
Query:  462 LGQMSEDFCEADDSVKDYGLRESFQKRFSGVVVPVLVAAVAPQGVNARLPRVQALACSSIARFCQ--PEHCGREQLPEAGAR--ALLAPLYELLRDSPWLSVKEESLAAVANIATVIGPGFAGFYDAFLPLATAILADATSVVMRTISGXXXXXXXXXGHCRRDGPNAARRNAAAAAARLRGNAMEFLALMGRAVGRARFEGDARAAMALLLI---------NSPGAAALLAAAARIGGVMGRGFSRYLDALVPRLLRIAAMDASFRIVDTDITLGGGSXXXXDGVEAFND-------RRQTISINTSAAQDKEAACRALFQFCVDLGAAFAPFAADVLVALVP 1433
            +GQMS DF              +F+K+F   V+P L+  +       + PRVQA A +++  F +  P+    + L E  A+  A+L+  +  L +     V E+ +  +A++A      F  +YD  +P    I+ +A +  ++                                  LRG  +E ++L+G AVG+ +F GDA   M LLL          + P  + L++A ARI  ++G+ F +YL  ++  ++R A++     ++D D           D V   +D        +Q   I T+  +DK +AC  L  +  +L   FA +A  V+  +VP
Sbjct:  431 IGQMSTDFAP------------TFEKKFHQKVIPGLLMVLEDD----QNPRVQAHAGAALVNFSEDCPKPILVQYLNEIMAKLEAILSAKFNELVEKGTKLVLEQVVTTIASVADTSEEQFVAYYDRLIPCLKYIIQNANTPELKM---------------------------------LRGKTIECVSLIGLAVGKDKFIGDATEIMDLLLKTHTEGDLPDDDPQTSYLISAWARICKILGKQFQQYLPLVIGPVMRTASLKPEVAVMDND---------DMDEVSGDDDWHFVSLGEQQNFGIRTAGIEDKASACDMLVCYARELKEGFADYAEPVVKLMVP 716          
The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig1957.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 16
Match NameE-valueIdentityDescription
A0A5D6XWI5_9STRA1.280e-3133.72Importin N-terminal domain-containing protein n=1 ... [more]
A0A2P6NWV8_9EUKA6.130e-2129.20TOG domain-containing protein n=1 Tax=Planoprotost... [more]
UPI0002657C431.090e-1727.75importin-5 n=1 Tax=Galendromus occidentalis TaxID=... [more]
Q9VN44_DROME1.810e-1425.36FI07923p n=25 Tax=Sophophora TaxID=32341 RepID=Q9V... [more]
A0A1I7S0C7_BURXY2.400e-1426.07(pine wood nematode) hypothetical protein n=1 Tax=... [more]
A0A7S0X158_9CHLO7.480e-1428.32Hypothetical protein n=1 Tax=Chlamydomonas leiostr... [more]
B4GFA9_DROPE1.740e-1325.14GL21654 n=5 Tax=obscura group TaxID=32355 RepID=B4... [more]
A0A8I6RFH5_CIMLE6.710e-1225.22Importin N-terminal domain-containing protein n=1 ... [more]
A0A4D8YMB3_SALSN1.580e-1126.69Importin N-terminal domain-containing protein n=2 ... [more]
A0A146LKY4_LYGHE2.770e-1124.71Importin-5 (Fragment) n=2 Tax=Lygus hesperus TaxID... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
P-wetherbeei_contig1957contigP-wetherbeei_contig1957:510..3257 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Phaeothamnion wetherbeei SAG_119_79 OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog115417.EPrPW00000024177
Model size1433
Max annot lvl121069|Pythiales
Hectar predicted targeting categoryother localisation
Exons5
Evalue2.63e-29
EggNOG OGsKOG2171@1|root,KOG2171@2759|Eukaryota,1MDH1@121069|Pythiales
DescriptionImportin. Source PGD
Cds size963
COG categoryUY
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_P-wetherbeei_contig1957.1.1prot_P-wetherbeei_contig1957.1.1Phaeothamnion wetherbeei SAG_119_79polypeptideP-wetherbeei_contig1957 980..3257 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186176.293019-UTR-P-wetherbeei_contig1957:509..9791683186176.293019-UTR-P-wetherbeei_contig1957:509..979Phaeothamnion wetherbeei SAG_119_79UTRP-wetherbeei_contig1957 510..979 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1683186176.3023193-CDS-P-wetherbeei_contig1957:979..11291683186176.3023193-CDS-P-wetherbeei_contig1957:979..1129Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1957 980..1129 +
1683186176.3112109-CDS-P-wetherbeei_contig1957:1372..15101683186176.3112109-CDS-P-wetherbeei_contig1957:1372..1510Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1957 1373..1510 +
1683186176.3206744-CDS-P-wetherbeei_contig1957:2007..23431683186176.3206744-CDS-P-wetherbeei_contig1957:2007..2343Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1957 2008..2343 +
1683186176.329961-CDS-P-wetherbeei_contig1957:2636..28331683186176.329961-CDS-P-wetherbeei_contig1957:2636..2833Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1957 2637..2833 +
1683186176.343795-CDS-P-wetherbeei_contig1957:3115..32571683186176.343795-CDS-P-wetherbeei_contig1957:3115..3257Phaeothamnion wetherbeei SAG_119_79CDSP-wetherbeei_contig1957 3116..3257 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_P-wetherbeei_contig1957.1.1

>prot_P-wetherbeei_contig1957.1.1 ID=prot_P-wetherbeei_contig1957.1.1|Name=mRNA_P-wetherbeei_contig1957.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=321bp
MSEDFCEADDSVKDYGLRESFQKRFSGVVVPVLVAAVAPQGVNARLPRVQ
ALACSSIARFCQPEHCGREQLPEAGARALLAPLYELLRDSPWLSVKEESL
AAVANIATVIGPGFAGFYDAFLPLATAILADATSVVMRTISGGGDGGGGG
RGHCRRDGPNAARRNAAAAAARLRGNAMEFLALMGRAVGRARFEGDARAA
MALLLINSPGAAALLAAAARIGGVMGRGFSRYLDALVPRLLRIAAMDASF
RIVDTDITLGGGSDDDDDGVEAFNDRRQTISINTSAAQDKEAACRALFQF
CVDLGAAFAPFAADVLVALVP
back to top

mRNA from alignment at P-wetherbeei_contig1957:510..3257+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_P-wetherbeei_contig1957.1.1 ID=mRNA_P-wetherbeei_contig1957.1.1|Name=mRNA_P-wetherbeei_contig1957.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=2748bp|location=Sequence derived from alignment at P-wetherbeei_contig1957:510..3257+ (Phaeothamnion wetherbeei SAG_119_79)
ACGGCTGCGGCGCCGACATGCAGCCGGCGCTCGGTGTCGTGGTGCCCATC ATCGTCAGCTTCTCGTCCGACCCGCACGCCCGTGTCAGGTGGGGGAGTTT GAGGGGGAGCAGGTTGTGTTGATAAAGCGAAGGTGGAGGACTTGAGGACA GAGCGAGTTGTTACGCTTCACCAGGAGAGGTAAAGAAGGAACGGAAGGAA AAGACAAGGACCTAGGCTACAATACTTTCCTCTCCTACTTCTTCCCTTCT CTTTCATCTCCGCCAGCTGTCCAGCATTGGCCCCTCATGTCTGCCTCCCT TCACCCCAGTTCCGCCTCTCTTACGACTGGCTAGCTGCCGCTGTCATGCC GCCACTTCCTGCCGCGATTGCCCCGTCAATGCACCGCCACCCCGCCGCTA TCACGTTGGCGTTGCGACCGGCGTCGACGCGAGCGGCGGCAGGTATGAGG CGCTGAAGTGCCTTGGGCAAATGTCGGAGGATTTCTGTGAGGCCGATGAC AGCGTGAAAGATTATGGCCTGCGCGAGTCGTTTCAGAAGCGCTTCAGCGG TGTCGTCGTGCCCGTCCTTGTGGCCGCCGTGGCGCCGCAGGGCGTCAACG CCCGCCTGCCGCGCGTGCAGGTGAGGCTTGATGGCTTTCTTTTCTTTCTT TTCTGTTTGTCCTAGCGGAAAGGCCGCTTTTCACTTATTCTGTTCTGTCG TCATCGTTCCATTGCGAGCAAGTTTGCGCCGGTTATGAAAATGATATTCA AGAATTTGCCTTTCTCTTATCCTCTTCCACCTTTAAGGGACTGTCGTTGT GTCGCGCCTCCCGATCTGTTGCCCCTTCTTCGTCGCCGCGGACCGTCGCT CCGATTCCGGCAGGCGTTGGCGTGCTCGTCCATCGCGCGGTTTTGCCAGC CGGAGCACTGCGGGCGCGAGCAGCTGCCAGAGGCTGGGGCGCGGGCGCTG CTTGCGCCGCTCTACGAGCTGCTGCGGGACAGCCCCTGGCTCTCCGTCAA GGTGCGGTACCTAACGGTGGAGGCCGGCGCGCGGGCGGGCGGCCGGGGCG GGAATAAGAAAACGGAACCCCCAGAAAAATGCACCAGGATTCAAATGAAT TGAAATCTTTGGAAGGAGGAAACCGATCGACGCGACTGGCTGGTAGGGTG ATTCCCGCTGCGCTGCTGCGCGGGCATTCTTTGCTGTCGGTGTTCGTTCC TGCTGGCACATGTTGATGCAAACATTCTATCATGGGCGGCGATTGTGTGG GCCATCCATGGTGGCGGCAGCACCTGTCAGGCCCGAGGTTGCGAGAGCAG CTGGTGGGTTCTATGGTGGTGCATCGAGTCTTTGTGGCGGATGATTTTTC CGTGTTGTGCGACTGCGATGAGCGCGGCTTGTGTCTACGGTGTCTCCGTA ATCTCTCTGCTGAAGCTGAACCTTCCCTTTGCACTGTCATGGCCGCTGTT GGGTTCGGCGACTCCTGAACGCACGCATTTTCATCCTTCCCCCCTTAGGA GGAAAGCTTGGCCGCCGTGGCCAACATCGCGACCGTCATCGGTCCCGGTT TTGCGGGCTTTTACGACGCCTTCCTGCCGCTTGCCACTGCCATCCTCGCC GACGCCACTAGCGTCGTGATGCGCACTATAAGCGGCGGCGGCGACGGCGG CGGCGGCGGGCGAGGTCATTGCCGGCGCGACGGGCCCAACGCGGCGCGCC GCAACGCCGCCGCCGCCGCTGCGCGGCTGCGTGGCAACGCGATGGAGTTC CTGGCACTCATGGGGCGGGCAGTGGGGCGGGCGCGGTTCGAGGGCGACGC CCGTGCCGCCATGGCGCTGCTCCTCATCAACTCGGTAAAGTCTTTCTGTT TATCGGTATGGCTTTTCTGCTTTTTGGTTAGAAAAGAGTAGAAACATTTG GCAAATTTCCTGTTTCATTTTGGGGGGGAGGGTTTCGAACCGTTTTTTAA GGGCAGGCTGTTTGGTCGGCAGAAGACGGGGTTGGCGATGAGGGGATCGC GACCGGCCTTTGGCTAAAGTTAACAAGTGCTTTAACGCGCCGTCAAATGC GCAAACTGCCCATACTTTCCCTTCAATCCGTTGCCACCGTTTTTTGCTTG CAGGATTCGTGGCTCCAACCGGGAGAGCCCGGGGCCGCAGCGCTGCTCGC CGCAGCGGCCCGCATCGGCGGCGTGATGGGCCGCGGCTTCTCGCGGTACC TCGACGCTCTGGTGCCGCGGCTGCTGCGCATCGCCGCCATGGATGCGTCC TTCCGCATTGTCGACACGGACATCACCCTGGGCGGCGGCAGCGACGATGA CGACGACGGCGTCGAAGCGTTCAAGTGGACCGTGAGGGGACTGGGCACGC AGGTCAGGAGATGGAAGATTCAGTCGGGTCGGACGGTTTTATGTGGCGGC GGCGCAAGGCTTCCACTGAGCCGTCACTCATTCAAGCTTGGTCCTGCCTT CTACCTTGCAAGGCTCCCTCCTTTCTTTTTGCATCCGAGTACCTTGGTCT ACCCTGCTGTCGTTCCTTGAACCCCAACGACTGCGAAACCCTGCCTCGTT TCTGCCCCGCCTCACCCTGTCTCACGCCTCCCTCCATCCCCGCGCCTTAC ATCGAGCGACCGGCGACAGACCATCAGCATCAACACGTCCGCGGCGCAAG ATAAGGAAGCCGCCTGCCGCGCCCTCTTCCAGTTCTGCGTCGACCTGGGG GCGGCCTTTGCGCCCTTCGCCGCAGACGTGCTGGTCGCGCTCGTGCCC
back to top

Coding sequence (CDS) from alignment at P-wetherbeei_contig1957:510..3257+

>mRNA_P-wetherbeei_contig1957.1.1 ID=mRNA_P-wetherbeei_contig1957.1.1|Name=mRNA_P-wetherbeei_contig1957.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=963bp|location=Sequence derived from alignment at P-wetherbeei_contig1957:510..3257+ (Phaeothamnion wetherbeei SAG_119_79)
ATGTCGGAGGATTTCTGTGAGGCCGATGACAGCGTGAAAGATTATGGCCT
GCGCGAGTCGTTTCAGAAGCGCTTCAGCGGTGTCGTCGTGCCCGTCCTTG
TGGCCGCCGTGGCGCCGCAGGGCGTCAACGCCCGCCTGCCGCGCGTGCAG
GCGTTGGCGTGCTCGTCCATCGCGCGGTTTTGCCAGCCGGAGCACTGCGG
GCGCGAGCAGCTGCCAGAGGCTGGGGCGCGGGCGCTGCTTGCGCCGCTCT
ACGAGCTGCTGCGGGACAGCCCCTGGCTCTCCGTCAAGGAGGAAAGCTTG
GCCGCCGTGGCCAACATCGCGACCGTCATCGGTCCCGGTTTTGCGGGCTT
TTACGACGCCTTCCTGCCGCTTGCCACTGCCATCCTCGCCGACGCCACTA
GCGTCGTGATGCGCACTATAAGCGGCGGCGGCGACGGCGGCGGCGGCGGG
CGAGGTCATTGCCGGCGCGACGGGCCCAACGCGGCGCGCCGCAACGCCGC
CGCCGCCGCTGCGCGGCTGCGTGGCAACGCGATGGAGTTCCTGGCACTCA
TGGGGCGGGCAGTGGGGCGGGCGCGGTTCGAGGGCGACGCCCGTGCCGCC
ATGGCGCTGCTCCTCATCAACTCGCCCGGGGCCGCAGCGCTGCTCGCCGC
AGCGGCCCGCATCGGCGGCGTGATGGGCCGCGGCTTCTCGCGGTACCTCG
ACGCTCTGGTGCCGCGGCTGCTGCGCATCGCCGCCATGGATGCGTCCTTC
CGCATTGTCGACACGGACATCACCCTGGGCGGCGGCAGCGACGATGACGA
CGACGGCGTCGAAGCGTTCAACGACCGGCGACAGACCATCAGCATCAACA
CGTCCGCGGCGCAAGATAAGGAAGCCGCCTGCCGCGCCCTCTTCCAGTTC
TGCGTCGACCTGGGGGCGGCCTTTGCGCCCTTCGCCGCAGACGTGCTGGT
CGCGCTCGTGCCC
back to top