mRNA_P-wetherbeei_contig19568.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19568.1.1 vs. uniprot
Match: A0A7C1Y076_9GAMM (Uncharacterized protein n=1 Tax=Thiotrichales bacterium TaxID=2026796 RepID=A0A7C1Y076_9GAMM) HSP 1 Score: 252 bits (644), Expect = 1.650e-79 Identity = 143/295 (48.47%), Postives = 181/295 (61.36%), Query Frame = 1
Query: 19 VWQWTDGKRGHERQCEGLVLALADRCSLDHHLLLVPSSPLRRLCDFFCASLPAVRDVPDPDLILGAGRRCALPMLTARRARGGRAVYIMRPQLPPACFDLCIIPRHDGVAPSAHVELSEGPLNPMRPAVNREAGLGVILLGGPSPHYAWDEEAMLAQIARLRATRPDMHWLATDSRRSPASLAPRLAAQHGLGFFSH--HDTAPDWLPKLLARAEQVWVSADSVSMIYEALSAGARVGVLDVPVRRIDRISAIAADLTARGLVMSLHAYGSDTSASPP--PLREADRLADIILAR 891
+W++ DGK GHE Q GLV ALA RC LD H + VP++ + + + P +PDPDLILGAG LPML AR ARGGR V +M+P LP + FDLC+IP HD + +V + G LNP+RPA ++ G+ILLGGPS H+ W +A+L Q+ + PD+ W TDSRRSP + RLA G H +T P WL + LARA +VWVS DSVSM+YEAL+AGA VG+L+VP R R+ L GLV HA+ T PP PL EA R AD+ILAR
Sbjct: 1 MWRFRDGKPGHENQTRGLVQALAARCPLDVHDIDVPAAG-QAVWWWATRRFPPGEGLPDPDLILGAGHATHLPMLAARHARGGRIVLLMKPSLPVSWFDLCLIPEHDAPPEAPNVLATRGVLNPVRPAPVKDPARGLILLGGPSRHHDWPVDALLEQVRAVVEGTPDVRWEVTDSRRSPPAALARLAEFDLPGVTCHPWQETPPGWLAERLARAGRVWVSEDSVSMLYEALTAGAAVGLLEVPRRLRGRVVQGVETLVREGLVTPFHAWQGGTPLEPPALPLDEAGRCADVILAR 294
BLAST of mRNA_P-wetherbeei_contig19568.1.1 vs. uniprot
Match: A0A3M1DRF5_9GAMM (Nucleoside-diphosphate sugar epimerase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1DRF5_9GAMM) HSP 1 Score: 246 bits (628), Expect = 2.830e-76 Identity = 136/298 (45.64%), Postives = 172/298 (57.72%), Query Frame = 1
Query: 13 LVVWQWTDGKRGHERQCEGLVLALADRCSLDHHLLLVPSSPLRRLCDFFCASLPAVRDVPDPDLILGAGRRCALPMLTARRARGGRAVYIMRPQLPPACFDLCIIPRHDGVAPSAHVELSEGPLNPMRPAVNREAGLGVILLGGPSPHYAWDEEAMLAQIARLRATRPDMHWLATDSRRSPASLAPRLAAQHG--LGFFSHHDTAPDWLPKLLARAEQVWVSADSVSMIYEALSAGARVGVLDVPVRRIDRISAIAADLTARGLVMSLHAYGSDTSASPP--PLREADRLADIILARW 894
L +W+ +DGK GH++Q GL AL H L +P R+L P R +PDPDLILGAG L +L ARRARGGRA+ +MRP LP A FDLC++P HDGV S + + GPLNPM P+ + G+IL+GGPS HY WDEE +L Q+ L +P+M W DSRR+P + RLA G + F SH D P WL LA A QVWVS DS SM+YEAL+AGA G+L P + R+ + L +GLV + + PP P EA R+A IL RW
Sbjct: 59 LSIWRLSDGKAGHDQQSLGLARALGRLRPASLHHLPLPGRG-RQLAWLLAGRFPPGRGLPDPDLILGAGHGTHLALLAARRARGGRAIVLMRPSLPAALFDLCLVPEHDGVTGSERLLTTRGPLNPMEPSQDHRPDRGLILVGGPSRHYGWDEEGLLGQVRTLLERQPEMAWTLADSRRTPDTTRERLATLAGGEVRFQSHRDCPPGWLASELAVAGQVWVSEDSASMLYEALTAGAATGLLQAPPKGPSRVRSGVDSLLQQGLVTPFAEWLAGARPEPPGHPFDEAGRVAGAILRRW 355
BLAST of mRNA_P-wetherbeei_contig19568.1.1 vs. uniprot
Match: A0A7U7J324_9GAMM (Uncharacterized protein n=1 Tax=Candidatus Contendobacter odensis Run_B_J11 TaxID=1400861 RepID=A0A7U7J324_9GAMM) HSP 1 Score: 240 bits (613), Expect = 8.600e-75 Identity = 140/299 (46.82%), Postives = 176/299 (58.86%), Query Frame = 1
Query: 13 LVVWQWTDGKRGHERQCEGLVLALADRCSLDHHLLLVPSSPLRRLCDFFCASLPAVRDVPDPDLILGAGRRCALPMLTARRARGGRAVYIMRPQLPPACFDLCIIPRHDGVAPSAHVELSEGPLNPMRPAVNREAGLGVILLGGPSPHYAWDEEAMLAQIARLRATRPDMHWLATDSRRSPASL---APRLAAQHGLGFFSHHDTAPDWLPKLLARAEQVWVSADSVSMIYEALSAGARVGVLDVPVRRIDRISAIAADLTARGLVMSLHAYGSDTSASP--PPLREADRLADIILARW 894
LVVW+++DGK GH+ Q GL ALA R + L P PL L C LP + P PDL+LGAG R L +L ARRARGG+AV +MRP LP FDLC+IP HD +V + G LN + P+V E G++L+GGPS H+AWD+ + QIA + A P +HW T SRR+P S A R+A + L +T PDWLP L RA QVWVSADSVSM+YEAL+AGA VGVL++P +R RIS LT G V + + P P EA+R A I+ RW
Sbjct: 4 LVVWRFSDGKAGHDSQSRGLAEALA-RLQPVEIVTLNPLPPLTALSGLLCGYLPLWKQQPVPDLLLGAGHRTHLSLLAARRARGGKAVVLMRPSLPLRLFDLCLIPEHDTPPTRPNVLATRGALNRIFPSVTLEPDRGLLLIGGPSAHFAWDDAKVCQQIAAIIAADPAIHWTLTTSRRTPPSFLESAQRIADER-LSVIPVTETGPDWLPAQLTRAGQVWVSADSVSMVYEALTAGAAVGVLELPQQRASRISRGLDRLTGDGWVTLFADWQRNRPLRPLTQPFNEAERCARWIVERW 300
BLAST of mRNA_P-wetherbeei_contig19568.1.1 vs. uniprot
Match: A0A523NZT2_9PROT (Nucleoside-diphosphate sugar epimerase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523NZT2_9PROT) HSP 1 Score: 237 bits (605), Expect = 1.660e-73 Identity = 133/296 (44.93%), Postives = 179/296 (60.47%), Query Frame = 1
Query: 13 LVVWQWTDGKRGHERQCEGLVLALADRCSLDHHLLLVPSSPLRRLCDFFCASLPAVRDVPDPDLILGAGRRCALPMLTARRARGGRAVYIMRPQLPPACFDLCIIPRHDGVAPSAHVELSEGPLNPMRPAVNREAGLGVILLGGPSPHYAWDEEAMLAQIARLRATRPDMHWLATDSRRSPASLAPRLAA--QHGLGFFSHHDTAPDWLPKLLARAEQVWVSADSVSMIYEALSAGARVGVLDVPVRRIDRISAIAADLTARGLVMSLHAYGSDTSASP-PPLREADRLADIILAR 891
LVVW+ DGK GH+RQ GLV ALA L+ + + + + + D+F LP PDPDLI+GAGRRC P++ ARRAR R VY+M+P LP CFDLC+IPRHDG S V +++G LN + P A G++L+GGPS HY WD ++ QI + P+ W+ DSRR+P L + + + +APD L +++ VWV+ DSVSMIYEAL+AGA VGVL++P +R DRI+++ DL ARG+V A+ + T PPL EA R A IIL R
Sbjct: 9 LVVWRLYDGKPGHDRQSAGLVRALAAATPLEECVFDIRNCHVS-VGDYFFKRLPFAVGAPDPDLIIGAGRRCQWPLVAARRARPARTVYLMKPLLPKRCFDLCLIPRHDGPTASPRVIITDGVLNDV-PVRTSNANDGLVLIGGPSEHYGWDPLSLKTQIKDIIDAAPEKKWVIADSRRTPPDTIAALECLFRDNVTLMPSYRSAPDRLRVQFEQSDLVWVTRDSVSMIYEALTAGAAVGVLEIPAKRKDRITSMVDDLAARGMVTPYAAWRAGTEPQAGPPLAEAARCAAIILTR 302
BLAST of mRNA_P-wetherbeei_contig19568.1.1 vs. uniprot
Match: A0A7K4EUK7_9EURY (Uncharacterized protein n=1 Tax=Halobacteria archaeon TaxID=2670410 RepID=A0A7K4EUK7_9EURY) HSP 1 Score: 236 bits (603), Expect = 3.130e-73 Identity = 135/305 (44.26%), Postives = 177/305 (58.03%), Query Frame = 1
Query: 1 MARALVVWQWTDGKRGHERQCEGLVLALADRCSLDHHLLLVPSSPLRRLCDFFCASLPAVRDVPDPDLILGAGRRCALPMLTARRARGGRAVYIMRPQLPPACFDLCIIPRHDGVAPSAHVELSEGPLNPMRPAVNREAGLGVILLGGPSPHYAWDEEAMLAQIARLRATRPDMHWLATDSRRSPASLAPRLA--AQHGLGFFSHHDTAPDWLPKLLARAEQVWVSADSVSMIYEALSAGARVGVLDVPVRR-IDRISAIAADLTARGLVMSLHAYGSDTSASPPP--LREADRLADIILARWPM 900
M +VVW +TDGK GH+ Q GL+ AL DR S+D H L S L + F + +D+PDPDLI+GAG L ML ARRARGGRA+ +M+P LP FDLCIIP HDG ++ ++ G LN +R + +++AG G+IL+GGPS H W E ++ QI + P ++W T SRR+PA L A +T WLP+ LARA QVWVS DSVSM+YEAL++GA VG+L VP R+ DR+++ L GLV + P EA R AD IL RWP+
Sbjct: 1 MPEPIVVWHFTDGKPGHDNQTAGLLAALRDRVSVDSHRLQTQSCRLSPV-SFITRHIAFAQDLPDPDLIIGAGHATHLRMLAARRARGGRAIVLMKPTLPTGLFDLCIIPAHDGPPAKDNILVTRGVLNRVRNSPDKDAGAGLILVGGPSAHVDWSSEDIIRQIRSIVEHTPGVNWTLTTSRRTPADFMDMLTGFAAGQPAVVPAAETTSGWLPERLARASQVWVSEDSVSMVYEALTSGAAVGLLSVPWRKSADRLASGIRVLLRDGLVTGFDGWQESAELRRPAESFDEAGRCADWILERWPV 304
BLAST of mRNA_P-wetherbeei_contig19568.1.1 vs. uniprot
Match: S9ZH98_9RHOO (Uncharacterized protein n=1 Tax=Thauera terpenica 58Eu TaxID=1348657 RepID=S9ZH98_9RHOO) HSP 1 Score: 235 bits (600), Expect = 8.080e-73 Identity = 131/296 (44.26%), Postives = 172/296 (58.11%), Query Frame = 1
Query: 19 VWQWTDGKRGHERQCEGLVLALADRCSLDHHLLLVPSSPLRRLCDFFCASLPAVRDVPDPDLILGAGRRCALPMLTARRARGGRAVYIMRPQLPPACFDLCIIPRHDGVAPSAHVELSEGPLNPMRPAVNREAGLGVILLGGPSPHYAWDEEAMLAQIARLRATRPDMHWLATDSRRSPASLAPRLAA--QHGLGFFSHHDTAPDWLPKLLARAEQVWVSADSVSMIYEALSAGARVGVLDVPVRRIDRISAIAADLTARGLVMSLHAYGSDTSASPPP--LREADRLADIILARW 894
+W TD K GH Q +GL A+A R +++ H + P + L + A P +PDPD IL AG R L L ARRARGGR + +MRP LP CFDLC+IP+HD ++V + G LN RP R+A G+ L+GGPS H+AWD +LAQI + + PD+HW T SRR+PA L A G+ DTAP W +A + Q WVS DSVSM+YE+L+AGA G+L VP RI+A A+L GLV + A+ + PP L EADR+A+ +LARW
Sbjct: 4 LWLITDNKPGHRSQLQGLAQAMAARTAIETHWIDTPRAR-HALLHWLSARFPPGAGLPDPDFILVAGHRTHLAGLAARRARGGRLIALMRPSLPLGCFDLCVIPQHDSPPTRSNVITTRGVLNTARPDRERKADKGLFLIGGPSKHFAWDSAGLLAQIDAILSATPDLHWTLTTSRRTPAQTESALLALRARGVDVRPVSDTAPGWAMAQVACSAQAWVSEDSVSMVYESLTAGAATGLLAVPRLGATRIAAGVAELQREGLVTTFEAWQQKGALHAPPERLAEADRVAEAVLARW 298
BLAST of mRNA_P-wetherbeei_contig19568.1.1 vs. uniprot
Match: A0A7C5TSN0_9GAMM (Uncharacterized protein n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7C5TSN0_9GAMM) HSP 1 Score: 234 bits (598), Expect = 2.070e-72 Identity = 140/301 (46.51%), Postives = 175/301 (58.14%), Query Frame = 1
Query: 10 ALVVWQWTDGKRGHERQCEGLVLALADRCSLDHHLLLVPSSPLRRLCDFFCASL-PAVRDVPDPDLILGAGRRCALPMLTARRARGGRAVYIMRPQLPPACFDLCIIPRHDGVAPSAHVELSEGPLNPMRPAVNREAGLGVILLGGPSPHYAWDEEAMLAQIARLRATRPDMHWLATDSRRSPASLAP--RLAAQHGLGFFSHHDTAPDWLPKLLARAEQVWVSADSVSMIYEALSAGARVGVLDVPVR-RIDRISAIAADLTARGLVMSLHAYGSDTSASPP--PLREADRLADIILARW 894
+L +W+ DGK GHERQ EGL ALA RC + H + P P R ++ A + P +PDPDLI+GAG +L ARRARGGRAV +MRP LP A FDLC+IP HD +V ++ GPLNP+ P R G++L+GGPS H+ WD A+LA I + A P W T SRR+P A R+A +T P WLP+ LARA WV+ DSVSM YEALSAGA VG+L VP R R R+ +L A GL + L + + + PP PL EA R A ILARW
Sbjct: 11 SLTLWRVLDGKPGHERQSEGLARALARRCEVAVHDIAAP--PARAALGWWLAGIFPPGAGLPDPDLIVGAGHATHAALLAARRARGGRAVVLMRPSLPLAWFDLCVIPGHDRPPARPNVLVTRGPLNPLAPG-ERRGEEGLVLVGGPSAHHGWDGAAVLAAIGEVLAREPGRPWTVTTSRRTPPEFADAARVALAGRARVVPWQETGPGWLPERLARAAVAWVTEDSVSMAYEALSAGAAVGLLPVPRRGRAGRVVHGIDELVAAGLAVRLADWRAGAALRPPAEPLDEAGRCAGWILARW 308
BLAST of mRNA_P-wetherbeei_contig19568.1.1 vs. uniprot
Match: A0A5C6CTA6_9BACT (Uncharacterized protein n=1 Tax=Bythopirellula polymerisocia TaxID=2528003 RepID=A0A5C6CTA6_9BACT) HSP 1 Score: 233 bits (595), Expect = 4.870e-72 Identity = 127/297 (42.76%), Postives = 176/297 (59.26%), Query Frame = 1
Query: 16 VVWQWTDGKRGHERQCEGLVLALADRCSLDHHLLLVPSSPLRRLCDFFCASLPAVRDVPDPDLILGAGRRCALPMLTARRARGGRAVYIMRPQLPPACFDLCIIPRHDGVAPSAHVELSEGPLNPMRPAVNREAGLGVILLGGPSPHYAWDEEAMLAQIARLRATRPDMHWLATDSRRSPASLAPRLAAQH--GLGFFSHHDTAPDWLPKLLARAEQVWVSADSVSMIYEALSAGARVGVLDVPVRRIDRISAIAADLTARGLVMSLHAYGSDTSASPP--PLREADRLADIILARW 894
V+W+ DGK GH Q GLV AL+D + H LL P+ + L +F P + +P P LILGAG L ML ARR GG+A+ +M+P LPP FDLCI+P HDG+A + HV LS G LN + P+ +EAG G++L+GGPS + W+ A++ QI + +P W T SRR+P L L H +T PDW+P L+R+ QVWVS DSVSM+YEAL++GA VG+L+VP +++ R++ +L A+G V + S P PL EA+R A +I R+
Sbjct: 4 VIWRMHDGKPGHANQTRGLVNALSDILPVQCHDLLAPART-QSLKWWFAKQFPPGKTLPRPQLILGAGHSTHLAMLAARRCYGGKAIVLMKPSLPPRLFDLCIVPEHDGLAAAPHVVLSRGVLNLVSPSFMKEAGRGLLLVGGPSAAHGWNSLAIVEQITTIVTDQPKFTWKLTTSRRTPPDFLGLLRTHQLANLTIVPHEETDPDWVPSELSRSSQVWVSEDSVSMVYEALTSGASVGLLEVPQKQVGRVARGVQELRAQGWVTRFSDWDRSRSLPAPAHPLHEANRCAALICERF 299
BLAST of mRNA_P-wetherbeei_contig19568.1.1 vs. uniprot
Match: A0A3D0SRL6_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D0SRL6_9GAMM) HSP 1 Score: 232 bits (591), Expect = 1.890e-71 Identity = 128/299 (42.81%), Postives = 172/299 (57.53%), Query Frame = 1
Query: 4 ARALVVWQWTDGKRGHERQCEGLVLALADRCSLDHHLLLVPSSPLRRLCDFFCASLPAVRDVPDPDLILGAGRRCALPMLTARRARGGRAVYIMRPQLPPACFDLCIIPRHDGVAPSAHVELSEGPLNPMRPAVNREAGLGVILLGGPSPHYAWDEEAMLAQIARLRATRPDMHWLATDSRRSPASLAPRLAAQHGLGFFSHHDTAPDWLPKLLARAEQVWVSADSVSMIYEALSAGARVGVLDVPVRRIDRISAIAADLTARGLVMSLHAYGSDTSASPPP--LREADRLADIILARW 894
A VVW+++DGK GH+ Q +GL AL +R + L P + L D+P PD+ LGAG R L +L ARR RGG+A+ +MRP LP FDLC+IP HD +V+++ G LN ++P+ + E G G++L+GGPS H+ WD ++ QIA + A P +HW T SRR+P + LA L +T PDWLP LARA Q WV+ADSVSM+YEAL+AGA VGVL+VP RR++R+S L A G + D P EA+R A I+ RW
Sbjct: 5 ASPRVVWRFSDGKAGHDNQSQGLADAL-NRLRPVEIITLDPLPAMMALSALGGGQRVPWHDLPAPDIALGAGHRTHLSLLAARRMRGGKAIVLMRPSLPLCLFDLCLIPAHDAPPARPNVQVTRGALNRIQPSNHLEPGRGLLLIGGPSAHFTWDNPSLYRQIAAIIAADPAIHWTLTTSRRTPQNFLQHLACAERLTVIPITETGPDWLPAQLARAGQAWVTADSVSMVYEALTAGAAVGVLEVPSRRMNRVSQGLERLAAEGWATFFTDWSRDCRLRRPSGIFNEAERCAHWIIERW 302
BLAST of mRNA_P-wetherbeei_contig19568.1.1 vs. uniprot
Match: A0A1M3HEM8_9PROT (Uncharacterized protein n=1 Tax=Thiobacillus sp. 65-1059 TaxID=1895860 RepID=A0A1M3HEM8_9PROT) HSP 1 Score: 231 bits (590), Expect = 2.590e-71 Identity = 141/301 (46.84%), Postives = 174/301 (57.81%), Query Frame = 1
Query: 1 MARALVVWQWTDGKRGHERQCEGLVLALADRCSLDHHLLLVPSSPL-RRLCDFFCASLPAVRDVPDPDLILGAGRRCALPMLTARRARGGRAVYIMRPQLPPACFDLCIIPRHDGVAPSAHVELSEGPLNPMRPAVNREAGLGVILLGGPSPHYAWDEEAMLAQIARLRATRPDMHWLATDSRRSPASLAPRLAAQHGLGFFSHHDTAPDWLPKLLARAEQVWVSADSVSMIYEALSAGARVGVLDV---PVRRIDRISAIAADLTARGLVMSLH--AYGSDTSASPPPLREADRLADIIL 885
M LVVW +DGK GH Q GL ALA H L P+ P R S+P P PDLI+GAG L +L +RA GGR+V +M+P LP CFDLCI+PRHDGVA AH + G LN ++PA R+AG G+ILLGG SPH+ WD +A+ QI + A PD+ W T SRR+PA L A L SH T PDWLP LAR+ VWV+ DS SM++EAL+AGA VGV D+ P R+ R A AD AR + +H +G + +P PL EADR A IL
Sbjct: 1 MPPPLVVWVVSDGKPGHVNQSLGLAEALARATPAAIHRL--PAMPAWRAWLGLLLKSVPG-GTFPKPDLIVGAGHATHLTLLALQRAHGGRSVVLMKPSLPRRCFDLCILPRHDGVAEDAHTLATAGALNRIQPAAARDAGHGLILLGGTSPHFEWDSDAIQVQIKGILARTPDIQWTLTTSRRTPADFLDALQASPNLTVISHTATPPDWLPAQLARSGTVWVTPDSSSMVFEALTAGAEVGVFDLSANPKSRVGRAIAQLAD--ARRITRFVHWRTHG-ELHPNPHPLAEADRCAAWIL 295 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19568.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19568.1.1 >prot_P-wetherbeei_contig19568.1.1 ID=prot_P-wetherbeei_contig19568.1.1|Name=mRNA_P-wetherbeei_contig19568.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=306bp MARALVVWQWTDGKRGHERQCEGLVLALADRCSLDHHLLLVPSSPLRRLCback to top mRNA from alignment at P-wetherbeei_contig19568:350..1267+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19568.1.1 ID=mRNA_P-wetherbeei_contig19568.1.1|Name=mRNA_P-wetherbeei_contig19568.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=918bp|location=Sequence derived from alignment at P-wetherbeei_contig19568:350..1267+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19568:350..1267+ >mRNA_P-wetherbeei_contig19568.1.1 ID=mRNA_P-wetherbeei_contig19568.1.1|Name=mRNA_P-wetherbeei_contig19568.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=918bp|location=Sequence derived from alignment at P-wetherbeei_contig19568:350..1267+ (Phaeothamnion wetherbeei SAG_119_79)back to top |