mRNA_P-wetherbeei_contig19525.1.1 (mRNA) Phaeothamnion wetherbeei SAG_119_79
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Overview
Homology
BLAST of mRNA_P-wetherbeei_contig19525.1.1 vs. uniprot
Match: D7FNG2_ECTSI (Queuine tRNA-ribosyltransferase catalytic subunit 1 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNG2_ECTSI) HSP 1 Score: 275 bits (702), Expect = 1.240e-87 Identity = 128/172 (74.42%), Postives = 151/172 (87.79%), Query Frame = 1
Query: 46 GEAAWTPTLLSIGERGARFKSYHDGSIKMLTPESSIDVQRKLGADLVVVLDECTPFHVDKDYTQRSMERSHRWALRSLAEFMRGDDGGQALYGIVQGGVYPDLRRDAVDFCNRWPFFGVAIGGSLGADKRTMYDVVSATAARVRRDRPLHLLGVGGVADIFHGVRCGIDTFD 561
G A + P+L+SI E+GARFKSY+D SIK LTPE SI++QR+LGADLVVVLDECTPFHVDKDYT+ SM R+HRWA+RSL EF+ GDDG QALYGI+QGGVYPDLR +AV+F N+ PFFG+A+GGSLGADK TM+ VVS T A VRRDRP+HLLG+GG+ADIFHGVR G+DTFD
Sbjct: 125 GGAEFAPSLVSISEKGARFKSYYDCSIKSLTPERSIEIQRQLGADLVVVLDECTPFHVDKDYTKSSMHRTHRWAMRSLREFIDGDDGTQALYGIIQGGVYPDLRNEAVEFVNKAPFFGIAVGGSLGADKATMHQVVSHTMANVRRDRPVHLLGIGGIADIFHGVRQGVDTFD 296
BLAST of mRNA_P-wetherbeei_contig19525.1.1 vs. uniprot
Match: A0A7R9UGF4_9STRA (tRNA-guanosine(34) queuine transglycosylase n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UGF4_9STRA) HSP 1 Score: 259 bits (662), Expect = 2.620e-83 Identity = 124/172 (72.09%), Postives = 139/172 (80.81%), Query Frame = 1
Query: 46 GEAAWTPTLLSIGERGARFKSYHDGSIKMLTPESSIDVQRKLGADLVVVLDECTPFHVDKDYTQRSMERSHRWALRSLAEFMRGDDGGQALYGIVQGGVYPDLRRDAVDFCNRWPFFGVAIGGSLGADKRTMYDVVSATAARVRRDRPLHLLGVGGVADIFHGVRCGIDTFD 561
G W+P+L SI E GA+FK+Y DG+ LTPESSI QR +GADLVVVLDECTPFHV KDYT++SM RSHRWALRSL EF+RGDDG QALYGI+QGGVY DLRR A F N WPFFG AIGGSLG K TMYD+VS TA+ +RRDRP+HLLG+G V DIF GVR GIDTFD
Sbjct: 68 GSMGWSPSLESINELGAKFKNYRDGTWCCLTPESSIAAQRCIGADLVVVLDECTPFHVTKDYTEQSMHRSHRWALRSLEEFIRGDDGSQALYGIIQGGVYKDLRRQAASFVNDWPFFGHAIGGSLGDSKTTMYDIVSETASLLRRDRPIHLLGIGSVKDIFAGVRMGIDTFD 239
BLAST of mRNA_P-wetherbeei_contig19525.1.1 vs. uniprot
Match: A0A7S4GH72_9EUGL (Queuine tRNA-ribosyltransferase catalytic subunit 1 n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4GH72_9EUGL) HSP 1 Score: 258 bits (658), Expect = 7.880e-80 Identity = 117/171 (68.42%), Postives = 142/171 (83.04%), Query Frame = 1
Query: 49 EAAWTPTLLSIGERGARFKSYHDGSIKMLTPESSIDVQRKLGADLVVVLDECTPFHVDKDYTQRSMERSHRWALRSLAEFMRGDDGGQALYGIVQGGVYPDLRRDAVDFCNRWPFFGVAIGGSLGADKRTMYDVVSATAARVRRDRPLHLLGVGGVADIFHGVRCGIDTFD 561
+ W P++ I E GA F+SYHDGS ++LTPE SI+VQ++LGADL++VLDECTPF+VDK+YT +S RSHRWA+RSL EF+RGDDG QALYGI+QGG YPDLR ++++F NR PFFG AIGGSLGADK M+DVV+ TA R DRP+HLLG+GGV DIFHGVR GIDTFD
Sbjct: 322 DCGWKPSVQRINENGAEFRSYHDGSRQLLTPERSINVQQELGADLILVLDECTPFNVDKEYTAQSTRRSHRWAIRSLDEFVRGDDGTQALYGIIQGGTYPDLRMESIEFTNRQPFFGTAIGGSLGADKGMMHDVVATTAKHCRTDRPIHLLGIGGVTDIFHGVRYGIDTFD 492
BLAST of mRNA_P-wetherbeei_contig19525.1.1 vs. uniprot
Match: A0A848Z7T7_9PROT (Queuine tRNA-ribosyltransferase n=1 Tax=Inquilinus sp. TaxID=1932117 RepID=A0A848Z7T7_9PROT) HSP 1 Score: 241 bits (615), Expect = 1.050e-75 Identity = 116/172 (67.44%), Postives = 134/172 (77.91%), Query Frame = 1
Query: 46 GEAAWTPTLLSIGERGARFKSYHDGSIKMLTPESSIDVQRKLGADLVVVLDECTPFHVDKDYTQRSMERSHRWALRSLAEFMRGDDGGQALYGIVQGGVYPDLRRDAVDFCNRWPFFGVAIGGSLGADKRTMYDVVSATAARVRRDRPLHLLGVGGVADIFHGVRCGIDTFD 561
G+AA P L I E GA F+SY DGS LTPESSI++QRKLGADL+V LDECTPFHV++DYT RSM SHRW RSLAEF RGDDG QALYG++QGGVYPDLRR++ ++ PFFG A+GGSLGA K MY+VVS A + DRP+HLLG+GG ADIF GVR GIDTFD
Sbjct: 127 GKAARPPALTRITEEGAEFRSYLDGSKLFLTPESSIEIQRKLGADLIVQLDECTPFHVERDYTARSMAMSHRWGDRSLAEFARGDDGAQALYGVIQGGVYPDLRRESTEYTAGRPFFGTAVGGSLGAHKDQMYEVVSYCAPHIHPDRPVHLLGIGGFADIFAGVRLGIDTFD 298
BLAST of mRNA_P-wetherbeei_contig19525.1.1 vs. uniprot
Match: A0A7S3UNN8_HETAK (Queuine tRNA-ribosyltransferase catalytic subunit 1 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UNN8_HETAK) HSP 1 Score: 244 bits (622), Expect = 1.540e-75 Identity = 114/168 (67.86%), Postives = 132/168 (78.57%), Query Frame = 1
Query: 58 WTPTLLSIGERGARFKSYHDGSIKMLTPESSIDVQRKLGADLVVVLDECTPFHVDKDYTQRSMERSHRWALRSLAEFMRGDDGGQALYGIVQGGVYPDLRRDAVDFCNRWPFFGVAIGGSLGADKRTMYDVVSATAARVRRDRPLHLLGVGGVADIFHGVRCGIDTFD 561
W PTLL + E GARF+SY DGSI LTPE SI +QR LGADL+VVLDECT +H+ KD T SM SHRWALRSLAEF+RGDDG QALYGI+QGGVY DLR ++ +F N PFFG AIGGSLG RTM+D+V TA VR DRP+HLLG+GG+ D+F+GV GIDTFD
Sbjct: 190 WVPTLLEVNENGARFRSYLDGSIWELTPEKSIQIQRDLGADLIVVLDECTAYHIGKDGTAESMRMSHRWALRSLAEFIRGDDGSQALYGIIQGGVYDDLRVESAEFINSQPFFGTAIGGSLGDSSRTMHDIVKFTAGLVREDRPIHLLGIGGIKDVFNGVSEGIDTFD 357
BLAST of mRNA_P-wetherbeei_contig19525.1.1 vs. uniprot
Match: A0A836CCU6_9STRA (tRNA-guanine(15) transglycosylase-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCU6_9STRA) HSP 1 Score: 241 bits (615), Expect = 6.140e-74 Identity = 118/169 (69.82%), Postives = 136/169 (80.47%), Query Frame = 1
Query: 64 PTLLSIGERGARFKSYHDGSIKMLTPESSIDVQRKLGADLVVVLDECTPFHVDKDYTQRSMERSHRWALRSLAEFMRGDDGG---QALYGIVQGGVYPDLRRDAVDFCNRWPFFGVAIGGSLGADKRTMYDVVSATAARVRRDRPLHLLGVGGVADIFHGVRCGIDTFD 561
P+LLSIGE+GARFKSYHDGSIK L+PE+SI +QR LGADL++VLDECTPFHVDK+YT S RSHRWALRSL EF+R + G QALYGI+QGGVY DLR ++ F N PFFG+A+GGSLGA MY VV T A VRRDRP+HLLG+GGVADIF+GV GI TFD
Sbjct: 161 PSLLSIGEKGARFKSYHDGSIKQLSPETSIQIQRDLGADLILVLDECTPFHVDKEYTAASTRRSHRWALRSLNEFVRTANEGAQQQALYGIIQGGVYRDLRAESAAFVNAQPFFGIAVGGSLGASAADMYRVVDMTMAMVRRDRPVHLLGIGGVADIFNGVSHGIGTFD 329
BLAST of mRNA_P-wetherbeei_contig19525.1.1 vs. uniprot
Match: A0A0K8MFV7_9PROT (Queuine tRNA-ribosyltransferase n=1 Tax=Caedimonas varicaedens TaxID=1629334 RepID=A0A0K8MFV7_9PROT) HSP 1 Score: 235 bits (599), Expect = 2.690e-73 Identity = 109/165 (66.06%), Postives = 132/165 (80.00%), Query Frame = 1
Query: 67 TLLSIGERGARFKSYHDGSIKMLTPESSIDVQRKLGADLVVVLDECTPFHVDKDYTQRSMERSHRWALRSLAEFMRGDDGGQALYGIVQGGVYPDLRRDAVDFCNRWPFFGVAIGGSLGADKRTMYDVVSATAARVRRDRPLHLLGVGGVADIFHGVRCGIDTFD 561
T+L I E GARFKSY +G I +LTPE S+++QR+LGADL+VVLDECTPFHVDK YT+ SM SHRWALRSLAEF RG+DG QALYGI+QGG+Y DLRR +F N PFFG A+GGSLGA K M+D+V T + +RP+HLLG+GG++DIF+GV GIDTFD
Sbjct: 126 TMLKITEEGARFKSYINGQIFLLTPERSLEIQRQLGADLIVVLDECTPFHVDKSYTECSMHLSHRWALRSLAEFQRGNDGRQALYGIIQGGIYEDLRRQGAEFVNHHPFFGHAVGGSLGASKEQMHDIVGLTLKMLDPERPVHLLGIGGISDIFNGVEQGIDTFD 290
BLAST of mRNA_P-wetherbeei_contig19525.1.1 vs. uniprot
Match: A0A7S2UTR2_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UTR2_9STRA) HSP 1 Score: 225 bits (574), Expect = 1.200e-72 Identity = 105/161 (65.22%), Postives = 129/161 (80.12%), Query Frame = 1
Query: 79 IGERGARFKSYHDGSIKMLTPESSIDVQRKLGADLVVVLDECTPFHVDKDYTQRSMERSHRWALRSLAEFMRGDDGGQALYGIVQGGVYPDLRRDAVDFCNRWPFFGVAIGGSLGADKRTMYDVVSATAARVRRDRPLHLLGVGGVADIFHGVRCGIDTFD 561
I E GA F+SY DGS ++LTPESS+++QR+LGADLVVVLDECTP++V+K+YT +SM RSHRWA+RSL +F RGDDG QALYGI+QGG+Y DLR +A F PFFG AIGG LG TM+ +V+ T +DRP+HLLG+GG+ DIFHGVRCGIDTFD
Sbjct: 3 ITENGAHFRSYVDGSHQLLTPESSLEIQRQLGADLVVVLDECTPYNVEKEYTYQSMLRSHRWAVRSLQQFDRGDDGRQALYGIIQGGIYEDLREEAAAFIASQPFFGTAIGGCLGDSSETMHRIVAYTMELCVKDRPIHLLGIGGLRDIFHGVRCGIDTFD 163
BLAST of mRNA_P-wetherbeei_contig19525.1.1 vs. uniprot
Match: A0A1M3IL74_9GAMM (Queuine tRNA-ribosyltransferase n=3 Tax=Proteobacteria TaxID=1224 RepID=A0A1M3IL74_9GAMM) HSP 1 Score: 231 bits (590), Expect = 6.590e-72 Identity = 112/165 (67.88%), Postives = 134/165 (81.21%), Query Frame = 1
Query: 67 TLLSIGERGARFKSYHDGSIKMLTPESSIDVQRKLGADLVVVLDECTPFHVDKDYTQRSMERSHRWALRSLAEFMRGDDGGQALYGIVQGGVYPDLRRDAVDFCNRWPFFGVAIGGSLGADKRTMYDVVSATAARVRRDRPLHLLGVGGVADIFHGVRCGIDTFD 561
TLL I E GA+FKSY DG + +LTPE SI VQR+LGADL+VVLDECTPFHVDK YTQRSM+ SHRWALRSLAEF R D+ QALYGI+QGGVY DLR+++ F N FFG A+GGSLGA K M+D+V+ T + + +RP+HLLG+GGV+DIF+GVR GIDTFD
Sbjct: 126 TLLKITEEGAQFKSYIDGRMHLLTPERSIQVQRQLGADLIVVLDECTPFHVDKIYTQRSMQLSHRWALRSLAEFQRTDNQRQALYGIIQGGVYDDLRKESSQFVNDHSFFGHAVGGSLGASKDQMHDIVALTMSLLNPERPVHLLGIGGVSDIFNGVRQGIDTFD 290
BLAST of mRNA_P-wetherbeei_contig19525.1.1 vs. uniprot
Match: A0A258X9A5_9PROT (Queuine tRNA-ribosyltransferase n=1 Tax=Alphaproteobacteria bacterium 16-39-46 TaxID=1970490 RepID=A0A258X9A5_9PROT) HSP 1 Score: 230 bits (586), Expect = 2.560e-71 Identity = 112/165 (67.88%), Postives = 128/165 (77.58%), Query Frame = 1
Query: 67 TLLSIGERGARFKSYHDGSIKMLTPESSIDVQRKLGADLVVVLDECTPFHVDKDYTQRSMERSHRWALRSLAEFMRGDDGGQALYGIVQGGVYPDLRRDAVDFCNRWPFFGVAIGGSLGADKRTMYDVVSATAARVRRDRPLHLLGVGGVADIFHGVRCGIDTFD 561
+LL I E+GA FKSY DG +LTPE SI+VQ KLGADL+VVLDECTPFHVDK YT+RSME SHRWALRSL EF R QALYGI+QGGVY DLR+ + F N PFFG AIGGSLGA K+ M DV+ TA + RDRP+HLLG+GG++DIF GV GIDTFD
Sbjct: 128 SLLKINEQGANFKSYLDGRQHLLTPEKSIEVQMKLGADLIVVLDECTPFHVDKAYTERSMEMSHRWALRSLEEFKRRSKDTQALYGIIQGGVYEDLRKASTGFVNEHPFFGHAIGGSLGASKQQMADVIGMTAPLLVRDRPIHLLGIGGISDIFEGVSMGIDTFD 292 The following BLAST results are available for this feature:
BLAST of mRNA_P-wetherbeei_contig19525.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_P-wetherbeei_contig19525.1.1 >prot_P-wetherbeei_contig19525.1.1 ID=prot_P-wetherbeei_contig19525.1.1|Name=mRNA_P-wetherbeei_contig19525.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=polypeptide|length=187bp GNDIGSGRGGGSTDSGEAAWTPTLLSIGERGARFKSYHDGSIKMLTPESSback to top mRNA from alignment at P-wetherbeei_contig19525:206..1280+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_P-wetherbeei_contig19525.1.1 ID=mRNA_P-wetherbeei_contig19525.1.1|Name=mRNA_P-wetherbeei_contig19525.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=mRNA|length=1075bp|location=Sequence derived from alignment at P-wetherbeei_contig19525:206..1280+ (Phaeothamnion wetherbeei SAG_119_79)back to top Coding sequence (CDS) from alignment at P-wetherbeei_contig19525:206..1280+ >mRNA_P-wetherbeei_contig19525.1.1 ID=mRNA_P-wetherbeei_contig19525.1.1|Name=mRNA_P-wetherbeei_contig19525.1.1|organism=Phaeothamnion wetherbeei SAG_119_79|type=CDS|length=561bp|location=Sequence derived from alignment at P-wetherbeei_contig19525:206..1280+ (Phaeothamnion wetherbeei SAG_119_79)back to top |